Special Issues

Microorganisms publishes Special Issues to create collections of papers on specific topics, with the aim of building a community of authors and readers to discuss the latest research and develop new ideas and research directions. Special Issues are led by Guest Editors, who are experts on the topic. The journal’s Editor-in-Chief and/or designated EBM will oversee Guest Editor appointments and Special Issue proposals, checking their content for relevance and ensuring the suitability of the material for the journal. The papers published in a Special Issue will be collected and displayed on a dedicated page of the journal’s website. For any inquiries related to a Special Issue, please contact the Editorial Office.

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Recent Advances on Microbial Interactions with Materials and Their Applications
edited by , and Fang Guan
submission deadline 31 May 2024 | 5 articles | Viewed by 8955
Keywords: microbiologically influenced corrosion; biofouling; biomineralization and bioleaching; elements cycle; microbial degradation.
(This special issue belongs to the Section Environmental Microbiology)
Prevention and Treatment of Helicobacter pylori Infection Related Gastrointestinal Disease
edited by Ping I. Hsu
submission deadline 31 May 2024 | 3 articles | Viewed by 6616
Keywords: Helicobacter pylori (H. pylori); prevention; treatment; gastrointestinal disease
(This special issue belongs to the Section Medical Microbiology)
The Urban Microbiome
edited by and
submission deadline 31 May 2024 | 2 articles | Viewed by 6233
Keywords: urban microbiome; shotgun metagenomic sequencing; targeted amplicon sequencing (16S/18S/ITS); metatranscriptome; metaproteome; metametabolome; metagenome-assembled genomes (MAGs); microbiome of built environment (MoBE); MetaSUB international consortium; biosynthetic gene clusters (BGCs); antimicrobial resistance (AMR); mobile genetic elements (MGEs) such as phages and plasmids; pathogenic microbes including SARS-CoV-2
(This special issue belongs to the Section Environmental Microbiology)
Endophytes for Managing Biotic and Abiotic Stress in Plants 2.0 submission deadline 31 May 2024 | 3 articles | Viewed by 6184
(This special issue belongs to the Section Plant Microbe Interactions)
The Role of Microbes in Biorefinery Products and Biofuels
edited by
submission deadline 31 May 2024 | 2 articles | Viewed by 5744
Keywords: biofuels; biochemicals; bioactives; circular bioeconomy; fermentation; anaerobic digestion; bioprocessing; biotechnology; waste valorization; sustainability
(This special issue belongs to the Section Microbial Biotechnology)
Latest Advances in the Microbial Degradation of Hazardous Organic Contaminants
edited by
submission deadline 31 May 2024 | 4 articles | Viewed by 5649
Keywords: biodegradation; persistent organic pollutants; microbial enzymes for biodegradation; metabolic pathways of pollutants; pollutant catabolism genes
(This special issue belongs to the Section Environmental Microbiology)
Clinical Implications of Microbial Biofilm 2.0 submission deadline 31 May 2024 | 1 articles | Viewed by 4848
Keywords: biofilms; clinical studies; biofilm microbial interaction; biofilm-related infections device-related biofilm diseases; antibiotic tolerance; host immune response evasion; biofilm clinical indicators
(This special issue belongs to the Section Biofilm)
Gram Positive Toxins Producing Organisms 2.0 submission deadline 31 May 2024 | 2 articles | Viewed by 4693
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Detection and Epidemiology of Vector-, Food- and Water-Borne Pathogens with a Focus on One Health Approaches
edited by Katrin Gaardbo Kuhn
submission deadline 31 May 2024 | 3 articles | Viewed by 4660
Keywords: vector-borne pathogens; food-borne pathogens; water-borne pathogens; detection; monitoring; transmission; epidemiology; One Health; emerging
(This special issue belongs to the Section Public Health Microbiology)
Advanced Research on Biological Control of Plant Disease or Microbial Interactions 2.0
edited by and
submission deadline 31 May 2024 | 5 articles | Viewed by 3962
(This special issue belongs to the Section Plant Microbe Interactions)
Bacillus anthracis: Infection Mechanisms, Vaccination and Immune Response submission deadline 31 May 2024 | 2 articles | Viewed by 3763
Keywords: Bacillus anthracis; anthrax; infection; pathogenesis; immunology; vaccines; immune response
(This special issue belongs to the Section Molecular Microbiology and Immunology)
New Advances in Functional Ingredients’ Development to Improve Physiological and Functional Properties of Probiotics
edited by , and
submission deadline 31 May 2024 | 2 articles | Viewed by 3161
Keywords: bioactive compounds; encapsulation; probiotics
(This special issue belongs to the Section Microbial Biotechnology)
Microorganisms in Functional Foods
edited by
submission deadline 31 May 2024 | 2 articles | Viewed by 3107
Keywords: functional food; probiotics; prebiotics; fermentation; food microbiology; health promotion; gut diversity
(This special issue belongs to the Section Food Microbiology)
Yeasts Biochemistry and Biotechnology, 2nd Edition submission deadline 31 May 2024 | 2 articles | Viewed by 3071
Keywords: yeast; eukaryote model; biotechnology; recombinant protein; bioproduction; protein engineering
(This special issue belongs to the Section Microbial Biotechnology)
Omics Research in Microbial Ecology
edited by and Natalia Gogoleva
submission deadline 31 May 2024 | 1 articles | Viewed by 2988
Keywords: microbial ecology; omics technology; omics data; microbiome; microbial communities; microbial symbioses; genomics; transcriptomics; metagenomics; proteomics; metabolomics; host-associated microbial community; water microorganisms; soil microorganisms; microbes associated with plants; microbes associated with animals; bacteria; archaea; fungi; algae; protists; viruses
(This special issue belongs to the Section Systems Microbiology)
Advances in Epidemiology and Modeling submission deadline 31 May 2024 | 1 articles | Viewed by 1585
Keywords: spatial modeling; disease ecology; metapopulation; predictive modeling; emerging epidemics; sociodemography; mechanistic model; public health data; optimal control; artificial intelligence
(This special issue belongs to the Section Public Health Microbiology)
Antimicrobial Resistance: Challenges and Innovative Solutions submission deadline 31 May 2024 | 1 articles | Viewed by 1288
Keywords: antimicrobial resistance; mechanisms of resistance; therapeutic approaches; antimicrobial stewardship; infection control; public health
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Effects of Probiotics on Health, 2nd Edition
edited by
submission deadline 31 May 2024 | 2 articles | Viewed by 1236
Keywords: probiotics; postbiotics; taxonomy; genomics; proteomics; metabolomics; microbiome; immunity; tissue; animals
(This special issue belongs to the Section Food Microbiology)
The Pathogenesis, Epidemiology and Diagnosis of Infectious Diseases in Livestock Animals
edited by and Fabiano José Ferreira De Sant'Ana
submission deadline 31 May 2024 | 1 articles | Viewed by 1069
Keywords: pathogenesis; epidemiology; diagnosis; livestock animals; infectious diseases
(This special issue belongs to the Section Veterinary Microbiology)
Microbial Communities in Aquatic Environments
edited by
submission deadline 31 May 2024 | 1 articles | Viewed by 1012
Keywords: microbial communities; aquatic environments; diversity; ecological roles; biogeochemical processes; anthropogenic influences; ecosystem resilience; nutrient cycling; climate variations; conservation strategies
(This special issue belongs to the Section Environmental Microbiology)
Cold-Adapted Bacteria and Marine Bacteria
edited by
submission deadline 31 May 2024 | 1 articles | Viewed by 641
Keywords: cold-adapted enzyme; cold-adapted bacteria; marine bacteria; white biotechnologies; enzyme catalysis; microbial catalysis; food biotechnologies; environmental biotechnologies; detergent industry; cleaning industry; biofuels; molecular biology; recombinant protein production; pharmaceutical industry; structural biology
(This special issue belongs to the Section Microbial Biotechnology)
Polymyxin Resistance in Gram-Negative Bacteria
edited by Sophia Vourli
submission deadline 31 May 2024 | Viewed by 302
Keywords: multi-drug resistance; polymyxins PK/PD; combination therapy; mcr genes; One Health
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Development of Nanomaterials for Antimicrobial Applications
edited by
submission deadline 31 May 2024 | Viewed by 295
Keywords: antimicrobial properties; nanomaterials; nanoparticles; antibiotics; pathogens of antimicrobial agents
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Microbiology of the Grape-Wine System submission deadline 31 May 2024 | Viewed by 265
Keywords: yeasts; bacteria; wine; grapevine; viticulture; microbial terroir; microbial ecology; metagenomics; metabolomics; microbial biogeography; microbiome; microbial communities; microbial interactions; plant– microbe interactions; winemaking
(This special issue belongs to the Section Food Microbiology)
New Trends in the Use of Microorganisms for Wastewater Treatment and Reuse submission deadline 31 May 2024 | Viewed by 235
Keywords: wastewater treatment; toxic compounds; bioremediation; biological processes; degradation pathways; green biotechnology; environmental engineering
(This special issue belongs to the Section Environmental Microbiology)
Environmental Sustainability Derived from Microorganisms: Bioresource Production and Recovery
edited by Hayden Webb
submission deadline 31 May 2024 | Viewed by 233
Keywords: waste management; bioresource production; environmental sustainability; microorganisms bioresource recovery
(This special issue belongs to the Section Microbial Biotechnology)
Sepsis: Underlying Mechanisms, Pathogen-Host Interactions, Precision Diagnostic, Therapeutic Approaches, and Supportive Management
edited by Kenneth Remy
submission deadline 31 May 2024 | Viewed by 177
Keywords: sepsis; hematology; immunology; personalized treatment; pathophysiology
(This special issue belongs to the Section Medical Microbiology)
Gene Expression Profiling in Leishmania: From Basic Research to Vaccines and Drug Targets
edited by and Ana M. Alonso
submission deadline 31 May 2024 | Viewed by 158
Keywords: Leishmania spp.; genomics; transcriptomics; proteomics; promastigotes; amastigotes; extracellular vesicles; vaccine candidates; drug target candidates; meta-analysis
(This special issue belongs to the Section Parasitology)
Microbial Biostimulants: From the Lab to the Field for a New Agriculture 3.0
edited by
submission deadline 31 May 2024 | Viewed by 157
Keywords: microorganisms; plant biostimulants; plant health promoters; agricultural; production; biofertilizer
(This special issue belongs to the Section Plant Microbe Interactions)
Emerging Pathogens Causing Acute Hepatitis submission deadline 15 Jun 2024 | 7 articles | Viewed by 14567 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
Microbial Infections and Rheumatic Diseases
edited by and Jacopo Angelini
submission deadline 15 Jun 2024 | 3 articles | Viewed by 6140 | Submission Open
Keywords: rheumatic diseases; microorganisms; host– pathogen interaction; dysbiosis; antibiotics; prebiotics; probiotics; vaccines; biomarkers; drug– drug interaction
(This special issue belongs to the Section Medical Microbiology)
Antimicrobial Resistance and Multidrug-Resistant Bacteria in Infectious Patients
edited by , Antonio Parisi, Patrizia Nardulli and Maria Rita Laforgia
submission deadline 15 Jun 2024 | 4 articles | Viewed by 5999 | Submission Open
Keywords: diffusion multi-drug resistant bacteria; outbreak by ESKAPE bacteria; hospital infections; care-related infections; anti-microbial nano-particles; role of antimicrobial nanomaterials in medicine; mechanism of action of antimicrobial nanomaterials; antimicrobial food packaging
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Advances in Soil Microbial Ecology
edited by Jie Wang and
submission deadline 15 Jun 2024 | 7 articles | Viewed by 5452 | Submission Open
Keywords: soil microorganisms; microbial ecology; microbial community; microbial diversity; microbial interactions; soil ecosystem; nutrient cycle
(This special issue belongs to the Section Environmental Microbiology)
Advanced Research on Ticks and Tick-Borne Diseases 2.0
edited by Galina N. Leonova and
submission deadline 15 Jun 2024 | 4 articles | Viewed by 4282 | Submission Open
Keywords: ticks; tick-borne viruses and bacteria; ecology; epidemiology; diagnostics; clinical manifestations; therapy
(This special issue belongs to the Section Parasitology)
The Metabolism of Lactobacilli: Molecular Mechanisms and Applications
edited by Junko Nishimura, and Yasushi Kawai
submission deadline 15 Jun 2024 | 3 articles | Viewed by 3773 | Submission Open
Keywords: lactobacilli; metabolites; postbiotics
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Interactions between Plant Beneficial Pseudomonas spp. and Their Host 2.0
edited by
submission deadline 15 Jun 2024 | 2 articles | Viewed by 3556 | Submission Open
(This special issue belongs to the Section Plant Microbe Interactions)
Beneficial Microorganisms and Antimicrobials 2.0 submission deadline 15 Jun 2024 | 2 articles | Viewed by 2960 | Submission Open
Keywords: antimicrobials; beneficial bacteria; probiotics; parabiotics; biological activity; biotherapeuticals
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Epidemiology and Pathogenesis of Human Enteroviruses 2.0
edited by
submission deadline 15 Jun 2024 | 1 articles | Viewed by 2889 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
The Application Potential of Microalgae in Green Biotechnology
edited by
submission deadline 15 Jun 2024 | 2 articles | Viewed by 2391 | Submission Open
Keywords: microalgae; green biotechnology; biomass; biofuel; biofertilizer; bioremediation
(This special issue belongs to the Section Microbial Biotechnology)
Fungal Infections and Antifungal Strategies
edited by
submission deadline 15 Jun 2024 | 2 articles | Viewed by 2074 | Submission Open
Keywords: fungal Infection; antifungal; drug resistance; antifungal compounds; immune system
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Recent Research on Fish Vaccination
edited by and
submission deadline 15 Jun 2024 | 1 articles | Viewed by 1849 | Submission Open
Keywords: fish vaccination; fish vaccines; adjuvants; DNA vaccines; recombinant vaccines; attenuated vaccines; immersion delivery; oral delivery; fish immunology
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Microbial Ecology and Sustainable Aquaculture
edited by Lior Guttman
submission deadline 15 Jun 2024 | 2 articles | Viewed by 1563 | Submission Open
Keywords: aquaculture; aquatic microbes; diversity; host– microbe interactions; resilience; sustainability
(This special issue belongs to the Section Environmental Microbiology)
The Use of Fungal Metabolites in the Food Industry
edited by
submission deadline 15 Jun 2024 | 1 articles | Viewed by 1352 | Submission Open
Keywords: fungi; mold; yeast; metabolites; exopolysaccharides; pullulan; pigment; melanin; single-cell protein.
(This special issue belongs to the Section Food Microbiology)
Bacterial Infections and Antimicrobial Resistance in Animals
edited by
submission deadline 15 Jun 2024 | 1 articles | Viewed by 1269 | Submission Open
Keywords: zoonotic foodborne bacteria; salmonellosis; antimicrobial resistance; virulence gene; multiple drug resistance; ESBL; beta-lactamases; PMQR; carbapenemases; MRSA
(This special issue belongs to the Section Veterinary Microbiology)
Gut Microbiota and Precise Modulation
edited by
submission deadline 15 Jun 2024 | 1 articles | Viewed by 1251 | Submission Open
Keywords: gut microbiota; human health; keystone taxonomy; disease; probiotics; prebiotics; precise modulation
(This special issue belongs to the Section Gut Microbiota)
Parasites and Infection: Strategies to Control, Diagnose, and Treat Parasitic Diseases submission deadline 15 Jun 2024 | 2 articles | Viewed by 1125 | Submission Open
Keywords: protozoan; ectoparasites; helminths
(This special issue belongs to the Section Parasitology)
State-of-the-Art Parasitic and Bacterial Infections in Romania 2.0 submission deadline 15 Jun 2024 | 1 articles | Viewed by 1044 | Submission Open
Keywords: parasitic and bacterial infections; host– parasite interactions; bacterial pathogens; antimicrobial resistance
(This special issue belongs to the Section Public Health Microbiology)
Advances in Pseudomonas aeruginosa Biofilm Control submission deadline 15 Jun 2024 | Viewed by 909 | Submission Open
Keywords: Pseudomonas aeruginosa; biofilm control; antibiofilm strategies; antibiotic resistance; chronic infections; wound infections; lung infections
(This special issue belongs to the Section Biofilm)
Molecular Epidemiology of Microbial Diseases in Animals
edited by Juan José Valdez-Alarcón, Elizabeth Loza-Rubio and Paula Ruybal
submission deadline 15 Jun 2024 | Viewed by 751 | Submission Open
Keywords: genotyping; surveillance; epidemiology; gene polymorphisms; evolution
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Toxic Microorganisms on Ecosystems: Current Concerns and Expansion
edited by
submission deadline 15 Jun 2024 | Viewed by 331 | Submission Open
Keywords: ecosystems; toxic microroganisms; toxicity public health; water quality
(This special issue belongs to the Section Public Health Microbiology)
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