>Q4ZHG3_DANRE (181 residues) MTSTSMNTCRVVFYEDRNFQGRSYECMSDVADMSPFLNRCHSCRVESGCFMMYDRPNYMG NQYFFRRGDYADYMSMFGMNDCIRSCRMIPMHRGTFRMRIYERENFGGQMHEMMDDCDNI MDRYRMSHCQSCHVMEGHWLVYEQPQYRGRMMYMRPGEYRSPREMGGMRFLSMRRINDSF Y |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MTSTSMNTCRVVFYEDRNFQGRSYECMSDVADMSPFLNRCHSCRVESGCFMMYDRPNYMGNQYFFRRGDYADYMSMFGMNDCIRSCRMIPMHRGTFRMRIYERENFGGQMHEMMDDCDNIMDRYRMSHCQSCHVMEGHWLVYEQPQYRGRMMYMRPGEYRSPREMGGMRFLSMRRINDSFY |
Prediction | CCCCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCCCCCCSSSSSSCCCSSSSSCCCCCCSSSSSCCCCCCCHHHHCCCCCCCSSSSSSCCCCCCCSSSSSSCCCCCCSSSSSCCCCCCHHHCCCCCCCCSSSSSCCCSSSSCCCCCCCSSSSSCCCCCCCHHHCCCCCCSSSSSCCCCCC |
Confidence | 9889899975999968998312799567878643333641159993742899837999315898669867776772799873014563136789865999954898741699547885578716788630899815738997179984238997577569977817886114776010149 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MTSTSMNTCRVVFYEDRNFQGRSYECMSDVADMSPFLNRCHSCRVESGCFMMYDRPNYMGNQYFFRRGDYADYMSMFGMNDCIRSCRMIPMHRGTFRMRIYERENFGGQMHEMMDDCDNIMDRYRMSHCQSCHVMEGHWLVYEQPQYRGRMMYMRPGEYRSPREMGGMRFLSMRRINDSFY |
Prediction | 7354644421000003650412323043313403521430200304623000012271402111044141332331233433021132134455423020113662534423134313103532334301002036320000122614121010332514325314243020012236437 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCCCCCCSSSSSSCCCSSSSSCCCCCCSSSSSCCCCCCCHHHHCCCCCCCSSSSSSCCCCCCCSSSSSSCCCCCCSSSSSCCCCCCHHHCCCCCCCCSSSSSCCCSSSSCCCCCCCSSSSSCCCCCCCHHHCCCCCCSSSSSCCCCCC MTSTSMNTCRVVFYEDRNFQGRSYECMSDVADMSPFLNRCHSCRVESGCFMMYDRPNYMGNQYFFRRGDYADYMSMFGMNDCIRSCRMIPMHRGTFRMRIYERENFGGQMHEMMDDCDNIMDRYRMSHCQSCHVMEGHWLVYEQPQYRGRMMYMRPGEYRSPREMGGMRFLSMRRINDSFY | |||||||||||||||||||
1 | 1zwmA | 0.39 | 0.37 | 10.95 | 1.33 | DEthreader | ----SKTGGKISFYEDRNFQGRRYDCDCDCADFRSYLSRCNSIRVEGGTWAVYERPFSGHMYILPQG-EYPEYQRWMGLNDRLGSCRAVHLSSGQAKIQVFEKGDFNGQMYETTEDCPSIMEQFHLREIHSCKVVEGTWIFYELPNYRGRQYLLDKKEYRKPVDAASPAIQSFRRI-VE-- | |||||||||||||
2 | 1zwmA | 0.28 | 0.25 | 7.77 | 1.00 | DEthreader | ---S-KTGGKISFYEDRNFQGRRYDCDCDCADFRSYLSRCNSIRVEGGTWAVYERPNFSGHMYILPQGEYPEYQRMGLND-RLGSCRAVHLSSGQAKIQVFEKGDFNGQMY-ETTEDCSIMEQ-FHLREIHSCKVVEWIFYELP--NYRGRQYLLKEYRKP--SPA-I-Q--SFRRIVE-- | |||||||||||||
3 | 2jdfA | 0.50 | 0.48 | 13.93 | 3.69 | SPARKS-K | --------GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGNAKVGSLRRVMDLYL | |||||||||||||
4 | 1blbC | 0.25 | 0.25 | 7.86 | 0.89 | CEthreader | AGKPQPLNPKIIIFEQENFQGHSHELNGPCPNLKETVEKAGSVLVQAGPWVGYEQANCKGEQFVFEKGEYPRWDSWTSSRRSLSSLRPIKVDSQEHKITLYENPNFTGKKMEVIDDVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDSGDFGQPQVQSVRRIRDMQW | |||||||||||||
5 | 2jdfA | 0.50 | 0.48 | 13.93 | 3.11 | MUSTER | --------GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGNAKVGSLRRVMDLYL | |||||||||||||
6 | 2jdfA | 0.50 | 0.48 | 13.93 | 2.80 | HHsearch | --------GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGNAKVGSLRRVMDLYL | |||||||||||||
7 | 2jdfA | 0.51 | 0.48 | 13.93 | 2.41 | FFAS-3D | ---------KITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGNAKVGSLRRVMDLYL | |||||||||||||
8 | 4w9aA | 0.55 | 0.51 | 14.81 | 3.69 | CNFpred | ---------KITFYEDRGFQGHCYECSSDCPNLQPYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRGDYPDYQQWMGFNDSIRSCRLIPQHTGTFRMRIYERDDFRGQMSEITDDCPSLQDRFHLTEVHSLNVLEGSWVLYEMPSYRGRQYLLRPGEYRRYLDWGAAKVGSLRRVMD--- | |||||||||||||
9 | 2jdfA | 0.41 | 0.39 | 11.38 | 1.17 | DEthreader | --------GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIY-ERPYGHQYFLRR-G-E-YPDYQQWGLSDSIRCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWANAKVGSLRRVMDLYL | |||||||||||||
10 | 1okiA | 0.21 | 0.19 | 6.13 | 1.00 | DEthreader | --P--PGNYRLVVFELENFQGRRAEFSGE-SNLADGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKGEYPRWNTWSYSD-RLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDASLWVY-GFS-VGSVKVSSGTWVGYQY-PGYRGYQYLEGDFRHW---QP-Q-M-QSLRRLRD-- | |||||||||||||
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References: | |
1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |