>CRGM2_CHIID (176 residues) MGKVIFYEDRNFQGRHYECSSDCADLSPYFSRCNSIRVEGGCWVLYEKPNYMGYQYFLTR GEYPDYQRWMGFNDTIRSCRIIPQYRGSYRMRIYERPDFGGQMMEFMDDCPSVYDTFRYR DIHSCHVMDGYWIFYEHPSYRGRQYFMRPGEYKKFSDWGATCPTIGSFRRIMDSWY |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MGKVIFYEDRNFQGRHYECSSDCADLSPYFSRCNSIRVEGGCWVLYEKPNYMGYQYFLTRGEYPDYQRWMGFNDTIRSCRIIPQYRGSYRMRIYERPDFGGQMMEFMDDCPSVYDTFRYRDIHSCHVMDGYWIFYEHPSYRGRQYFMRPGEYKKFSDWGATCPTIGSFRRIMDSWY |
Prediction | CCSSSSSSCCCCCSSSSSSCCCCCCHHHHHCCCCSSSSCCCCSSSSSCCCCCCSSSSSCCCCCCCHHHHCCCCCCSSSCSCCCCCCCCCSSSSSSCCCCCCSSSSSCCCCCCHHHHCCCCCCCSSSSCCCCSSSSSCCCCCSSSSSSCCCCCCCHHHHCCCCCCSSSSSSSCCCCC |
Confidence | 98599995799813479966898652343074025998272189996799932489966977766677468886112100125788864699985799974279990578766881788973189980793899818999336899748856997883789994455887201049 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MGKVIFYEDRNFQGRHYECSSDCADLSPYFSRCNSIRVEGGCWVLYEKPNYMGYQYFLTRGEYPDYQRWMGFNDTIRSCRIIPQYRGSYRMRIYERPDFGGQMMEFMDDCPSVYDTFRYRDIHSCHVMDGYWIFYEHPSYRGRQYFMRPGEYKKFSDWGATCPTIGSFRRIMDSWY |
Prediction | 74201000366040232214431440352053020020351300001227140211104424143254124332201213323444431201011367153432313431320343233440200203513000022361412101034351532441324333010022036437 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCSSSSSSCCCCCSSSSSSCCCCCCHHHHHCCCCSSSSCCCCSSSSSCCCCCCSSSSSCCCCCCCHHHHCCCCCCSSSCSCCCCCCCCCSSSSSSCCCCCCSSSSSCCCCCCHHHHCCCCCCCSSSSCCCCSSSSSCCCCCSSSSSSCCCCCCCHHHHCCCCCCSSSSSSSCCCCC MGKVIFYEDRNFQGRHYECSSDCADLSPYFSRCNSIRVEGGCWVLYEKPNYMGYQYFLTRGEYPDYQRWMGFNDTIRSCRIIPQYRGSYRMRIYERPDFGGQMMEFMDDCPSVYDTFRYRDIHSCHVMDGYWIFYEHPSYRGRQYFMRPGEYKKFSDWGATCPTIGSFRRIMDSWY | |||||||||||||||||||
1 | 1zwmA | 0.57 | 0.56 | 16.17 | 1.33 | DEthreader | GGKISFYEDRNFQGRRYDCDCDCADFRSYLSRCNSIRVEGGTWAVYERPNFSGHMYILPQGEYPEYQRWMGLNDRLGSCRAVHLSSGQAKIQVFEKGDFNGQMYETTEDCPSIMEQFHLREIHSCKVVEGTWIFYELPNYRGRQYLLDKKEYRKPVDWGAASPAIQSFRRI-VE-- | |||||||||||||
2 | 1zwmA | 0.51 | 0.50 | 14.47 | 1.33 | DEthreader | GGKISFYEDRNFQGRRYDCDCDCADFRSYLSRCNSIRVEGGTWAVYERPNFSGHMYILPQGEYPEYQRWGLND-RLGSCRAVHLSSGQAKIQVFEKGDFNGQMYETTEDCPSIMEQFHLREIHSCKVVEGTWIFYELPYRGRQYLLDKKE-YRKPVDWGAASPAIQSFRRIVE--- | |||||||||||||
3 | 2jdfA | 0.63 | 0.62 | 17.87 | 3.95 | SPARKS-K | -GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLYL | |||||||||||||
4 | 2jdfA | 0.63 | 0.62 | 17.87 | 0.90 | CEthreader | -GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLYL | |||||||||||||
5 | 2jdfA | 0.63 | 0.62 | 17.87 | 3.29 | MUSTER | -GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLYL | |||||||||||||
6 | 2m3cA | 0.62 | 0.61 | 17.56 | 2.85 | HHsearch | MGKIIFYEDRNFGGRYHECMSDCADLHSYFNRCHSIRVESGCFMVYDRTNFMGRQYFLRRGEYPDYMRTMGMNDCVRSCRMIPLHHGSFKMRLYEHSDMGGRMMELMDDCPNLMDRFNMSDFHSCHVMDGHWLVYEQPNYTGRQFYLRPGEYRSYNDWGGVTSRMGSIRRITDL-- | |||||||||||||
7 | 2m3cA | 0.62 | 0.61 | 17.55 | 2.52 | FFAS-3D | MGKIIFYEDRNFGGRYHECMSDCADLHSYFNRCHSIRVESGCFMVYDRTNFMGRQYFLRRGEYPDYMRTMGMNDCVRSCRMIPLHHGSFKMRLYEHSDMGGRMMELMDDCPNLMDRFNMSDFHSCHVMDGHWLVYEQPNYTGRQFYLRPGEYRSYNDWGGVTSRMGSIRRITD--- | |||||||||||||
8 | 2jdgA | 0.61 | 0.60 | 17.08 | 4.01 | CNFpred | -GSIIFLEDRAFQGRIYGCTTDCPNLQPYFSRCNSIVVQSGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVM---- | |||||||||||||
9 | 2jdfA | 0.58 | 0.57 | 16.48 | 1.33 | DEthreader | -GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPYRGRQYLLRPG-EYRRFLDWGAPNAKVGSLRRVMDLYL | |||||||||||||
10 | 2jdfA | 0.56 | 0.53 | 15.38 | 1.17 | DEthreader | -GKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWGLSD-SIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPYRGRQYLLRPG-EYR-RFLDGAPNAKVGSLRRVM---- | |||||||||||||
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References: | |
1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |