>C3YKG6_BRAFL (128 residues) SKCSSIVVESGTWILYEDKDYMGKTYVLTKGQYSNPAKWTGDRDTISCLRCVADDTLTLF EHSNFNGRACTLTGQAPNLKRGDFNNKCSSIMVQQGTWVVYEHMNFRGKAHVLKPGDYSD CAKWGGME |
Sequence |
20 40 60 80 100 120 | | | | | | SKCSSIVVESGTWILYEDKDYMGKTYVLTKGQYSNPAKWTGDRDTISCLRCVADDTLTLFEHSNFNGRACTLTGQAPNLKRGDFNNKCSSIMVQQGTWVVYEHMNFRGKAHVLKPGDYSDCAKWGGME |
Prediction | CCSSSSSSSCCCSSSSCCCCCCCSSSSSCCCCCCCHHHCCCCCCCCSSSSSCCCCSSSSSSCCCCCCSSSSSCCCCCCHHHCCCCCCSSSSSSSCCCSSSSCCCCCCSSSSSSCCCCCCCHHHCCCCC |
Confidence | 92148999366299981899973588747954776566178899723577627747999826999841799827887566638888404899925948998089981048986787679977737889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | SKCSSIVVESGTWILYEDKDYMGKTYVLTKGQYSNPAKWTGDRDTISCLRCVADDTLTLFEHSNFNGRACTLTGQAPNLKRGDFNNKCSSIMVQQGTWVVYEHMNFRGKAHVLKPGDYSDCAKWGGME |
Prediction | 84031040441100001346141211204424143244122334322002334432020013771533323034313202444334302002036331201232704131120443615325423248 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCSSSSSSSCCCSSSSCCCCCCCSSSSSCCCCCCCHHHCCCCCCCCSSSSSCCCCSSSSSSCCCCCCSSSSSCCCCCCHHHCCCCCCSSSSSSSCCCSSSSCCCCCCSSSSSSCCCCCCCHHHCCCCC SKCSSIVVESGTWILYEDKDYMGKTYVLTKGQYSNPAKWTGDRDTISCLRCVADDTLTLFEHSNFNGRACTLTGQAPNLKRGDFNNKCSSIMVQQGTWVVYEHMNFRGKAHVLKPGDYSDCAKWGGME | |||||||||||||||||||
1 | 3qk3A | 0.33 | 0.33 | 9.86 | 2.58 | SPARKS-K | EKVGSIQVESGPWLAFESRAFRGEQFVLEKGDYPRWDAWSNSSDSLLSLRPLNIHKLHLFENPAFSGRKMEIVDDVPSLWAHGFQDRVASVRAINGTWVGYEFPGYRGRQYVFERGEYRHWNEWDASQ | |||||||||||||
2 | 2m3cA | 0.34 | 0.34 | 10.07 | 2.56 | HHsearch | NRCHSIRVESGCFMVYDRTNFMGRQYFLRRGEYPDYMRTMGMNDCVRSCRMIPLFKMRLYEHSDMGGRMMELMDDCPNLMDRFNMSDFHSCHVMDGHWLVYEQPNYTGRQFYLRPGEYRSYNDWGGVT | |||||||||||||
3 | 1zwmA | 0.33 | 0.33 | 9.86 | 1.76 | FFAS-3D | SRCNSIRVEGGTWAVYERPNFSGHMYILPQGEYPEYQRWMGLNDRLGSCRAVGQAKIQVFEKGDFNGQMYETTEDCPSIMEQFHLREIHSCKVVEGTWIFYELPNYRGRQYLLDKKEYRKPVDWGAAS | |||||||||||||
4 | 2nbrA | 0.35 | 0.35 | 10.48 | 2.77 | CNFpred | SRCNSIRVESGCWMLYERPNYQGQQYLLRRGEYPDYQQWMGLSDSIRSCCLIP-HRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMD | |||||||||||||
5 | 8pd4A | 0.05 | 0.03 | 1.52 | 0.67 | DEthreader | --DATAHPSLLLT----------DLRSVQDPCIL-G--LQ-SFRHYWEVLVGEGAEWGLGVCQLPSPWALWLGPRCIGIFLDISF-LRPYFFICDATPLILPPT------------------------ | |||||||||||||
6 | 8hp9A | 0.07 | 0.05 | 1.93 | 0.67 | DEthreader | -------NL------SGLFLPSNVTWFHAIHDNP-V--L---PFNDGVYFASENIRGWIFGTTLDSTSLLIVNLREFVFKNIYFKNITRFQTLLALAAAYYVGY------------------------ | |||||||||||||
7 | 2jdfA | 0.30 | 0.30 | 9.23 | 2.58 | SPARKS-K | SRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPAYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPN | |||||||||||||
8 | 1okiA | 0.31 | 0.31 | 9.44 | 0.72 | CEthreader | DRVRSIIVSAGPWVAFEQSNFRGEMFILEKGEYPRWNTWSSSYDRLMSFRPIQEHKISLFEGANFKGNTIEIQGDAPSLWVYGFSDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQ | |||||||||||||
9 | 7yqhB1 | 0.15 | 0.13 | 4.48 | 0.16 | MUSTER | SSLNAFVVSN-LFRDIMRSCGIRS-VTYCLSQFDYSKGRAHGNPTIVDALEFSKPEIELFVDLSRIERIV-LIEDKNEARNFLQRNPVNVNMA----------LRDRRSGFQLSGGTYQDKIRLKVNS | |||||||||||||
10 | 2jdfA | 0.30 | 0.30 | 9.23 | 2.55 | HHsearch | SRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPYRMKIYDRDELRGQMSELTDDCLSVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPN | |||||||||||||
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References: | |
1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |