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Article

Synthesis and Thermotropic Phase Behavior of Four Glycoglycerolipids

by
Wouter F. J. Hogendorf
1,
Vivien Jagalski
1,†,
Thomas G. Pomorski
2,
Mikael Bols
1,
Marité Cárdenas
1,* and
Christian M. Pedersen
1,*
1
Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
2
Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C 1871, Denmark
*
Authors to whom correspondence should be addressed.
Physicochemical characterizations were performed by this author.
Molecules 2013, 18(11), 13546-13573; https://doi.org/10.3390/molecules181113546
Submission received: 16 September 2013 / Revised: 15 October 2013 / Accepted: 19 October 2013 / Published: 1 November 2013
(This article belongs to the Special Issue Synthesis, Structure, Analysis and Properties of Glycolipids)

Abstract

:
Four glycoglycerolipids with different head groups have been synthesized and their physicochemical properties studied. The lengths of the head groups from a mono-saccharide to a trisaccharide, in addition to the anomeric stereochemistry for the smaller glycoglycerolipids, have been modified. The synthesis has been optimized to avoid glycerol epimerization and to allow up-scaling. The physicochemical properties of the glycoglycerolipids were studied and a strong de-mixing of the gel-phase, depending on the head-group, was observed.

1. Introduction

Glycolipids play a central role in plants, microorganism and animals. Glycolipids consist of a carbohydrate head group linked to a lipid, typically a diacylglycerol (glycoglycerolipid), ceramide (glycosphingolipid) or prenol. Any given organism can vary both the lipid part and the head group of the glycolipid in order to meet changes in the environmental and physiological conditions [1,2] For example, Acholeplasma laidlawii strain A can incorporate supplied fatty acids of a fixed composition when grown under conditions at which the cell’s endogenous fatty acid synthesis were impaired. This organism responds by changing the composition of the polar part (the carbohydrate) of its glycoglycerolipids in order to balance the cell membrane composition of lamellar- and non-lamellar forming glycolipids. The balance between lamellar and non-lamellar forming glycoglycerolipids is critical for the growth of bacterial cells [3,4]. It has been found that, in the case for A. laidlawii, glycolipids with one carbohydrate moiety or one acyl group (i.e. monoglucosyl-diacylglycerol, monoacylmonoglucosyldiacylglycerol and monoacyl-diglucosylglycerol) form non-lamellar structures of the inverse type, whereas diglucosyldiacylglycerol was found to be lamellar forming [5]. Non-lamellarity is favored upon increased lipid acyl chain length or saturation. The non-lamellar forming glycoglycerolipids are thought to be important for the formation of non-bilayer structures and bilayers with small radius of curvature. Moreover, glycolipids have typically very high melting temperatures (the temperature at where the main phase transition from the gel to the fluid liquid crystalline phase occurs) as compared to other lipids due to intra hydrogen bonding among the sugar groups [6,7,8].
In eukaryotes, glycolipids comprise a small but vital fraction (10%–20%) of the membrane lipids [9] that serve important biological functions in signal transduction, as anchors for cell surface proteins in cascade pathways in immune response and cell communication, among others [10]. Most of the research in the glycolipid field focuses on the direct impact on signaling pathways or immunological reactions [11]. However, the underlying molecular mechanisms of the effects caused by glycolipids on the physicochemical properties of cellular membranes has been poorly studied so far. In part, this is due to the difficulty of obtaining chemically well-defined purified glycolipid fractions in large quantities, as natural isolates are heterogeneous and difficult to purify.
As an alternative approach to lipid extraction from cellular membranes, chemical synthesis of glycolipids is an active field of research. Special focus has been given to the glycolipids found in pathogens as these are often found to be immunogenic. Currently, lipopolysaccharides (LPSs) are under investigation due to their great potential as vaccine components (they are also known as the endotoxin of Gram-negative bacteria) [12]. The Gram positive counterpart—lipoteichoic acids (LTAs) have so far received less attention and their biological roles remain mostly unclear and have been heavily discussed for decades. One of the major problems regarding the determination of LTAs’ biological activity was found to be inappropriate purification methods leading to partly decomposed glycolipids, or samples containing immunogenic lipoproteins. The biological role of LTA was recently confirmed by using synthetic LTA [13,14] from Streptococcus pneumonia [15] and Staphylococcus aureus [16,17]. Because well-defined synthetic glycolipids are required to achieve reliable biological results, a demand for more structures and derivatives has arisen. We are currently working on the total synthesis of LTA from Clostridium difficile. As a part of the synthesis of the glycoglycerollipid anchor part, the general procedure for the synthesis of gentiobiosyl diacylglycerol has been optimized for purity and up-scaling. These improvements will be discussed in the following paragraphs.
The similarity between the lipid anchor and some of the simple glycoglycerolipids found in plants and microorganisms prompted us to investigate the effect of these smaller glycoglycerolipids, formed by the lysis of LTA, on the physicochemical properties of model cell membranes. As a model membranes system we choose a well-described combination of two glycerophospholipids: 1,2-di-myristoyl-phosphatidylcholine (DMPC) and 1,2-di-myristoyl-phosphatidylserine (DMPS) at a biologically relevant proportion (cellular membranes usually carry a net negative charge that ranges from 5 to 25 mol%) [9]. In order to directly study the influence of the head group on the thermotropic properties of the lipid membrane, model compounds were synthesized with 1,2-di-myristoyl-sn-glycerol as the lipophilic part. Thus, the contribution of the acyl chain is kept constant among the various lipid species studied in such a way that only the carbohydrate head contribution is systematically varied. Four head groups were chosen: α- and β-glucopyranoside (found in various organisms [18], β-gentiobiose (found in lipid anchor from S. aureus) and 6-O-β-d-glucopyranosyl gentiobiose (gentiotriose; corresponding to the lipid anchor from C. difficile). Vesicles were prepared with a fixed molar composition of DMPC, DMPS and each of the four glycoglycerolipids (79, 8 and 13 mol%, respectively) and studied by a combination of differential scanning calorimetry (DSC) and confocal scanning fluorescence microscopy (CSFM).

2. Results and Discussion

2.1. Synthesis of the Glycoglycerolipids

Despite a large number of diacylglycerol-containing glycolipids that have been synthesized through the years, the chemistry is still not straight forward. Glycosylation of a ketal (or acetal) protected glycerol remains an obstacle for a fast and high yielding synthesis of the common glycolipids. Methods [19,20] have been developed, where more persistent protective groups on the glycerol acceptor or other modifications are used, but due to their easy access and orthogonality to other common protective groups, the ketals are still preferred. The main problem by using ketals (or acetals) is the acid catalyzed (Lewis or Brønsted) epimerization of the glycerol part that takes place under practically all glycosylation methods and causes difficulties in the purification [21,22,23,24]. The problem with epimerization seems less pronounced when having neighboring group participation [25] or ortho-esters. However, to our surprise it turned out to be a major problem when using the gentiobiose donor 2 (Scheme 1) which is highly attractive since it can be prepared from commercially available gentiobiose peracetate 1 in 2 simple steps [26]. The initial glycosylation results gave up to 25% of the glycerol epimer 4, which is seen as additional signals in the NMR spectra as a doubling of the signals in the 1H-NMR at 4.49–4.54 ppm and in the 13C-NMR two additional peaks at 34.8 and 36.4 ppm. (see Supplementary materials). The epimer 4 could not be chromatographically separated from the desired epimer 3 (Scheme 1). To improve the glycosylation the conditions were optimized.
Since both the donor 2 and the enantiomerically pure cyclohexylidene glycerol are readily available building blocks, it was decided to focus the optimization on the promoter system and the purification methods. Initial studies, using TMSOTf as the promoter in CH2Cl2, revealed that the yields were improved by lowering the temperature from 0 to −40 °C and the epimer formation was limited as well (from 25% to 10%). Lowering the temperature further (−60 °C) did neither improve the overall yield and the anomeric selectivity further (Table 1). Besides the anomeric selectivity, which to some extent is controlled by neighboring group participation and the undesired glycerol epimerization, ortho-ester formation was observed as a major side reaction. With up to at least eight different glycosylation products formed—all with similar retention times, TMSOTf was abandoned as the promoter system. Changing the promoter to BF3×OEt2, which should decrease the amount of acid catalyzed epimerization [27], resulted in similar yields and amounts of the undesired α-anomer. The epimerization was however less dominant and the formation of orthoesters likewise. The optimal condition was found to be −35 °C with a slow heating to 0 °C, where the reaction was quenched with triethylamine. With the lower amount of side products formed it was possible to selectively crystallize the product out from the crude reaction mixture, using a mixture of ethyl acetate and petroleum ether, in a very satisfying 70% yield (Table 1).
Scheme 1. Synthesis of the gentiobiosyl donor 2 and its glycosylation with 1,2-O-cyclohexylidene glycerol.
Scheme 1. Synthesis of the gentiobiosyl donor 2 and its glycosylation with 1,2-O-cyclohexylidene glycerol.
Molecules 18 13546 g004
Table 1. Conditions for the gentiobiosylation of 1,2-O-isopropylidene glycerol.
Table 1. Conditions for the gentiobiosylation of 1,2-O-isopropylidene glycerol.
T (°C)PromotorYield (%) aα-x (%) bEpimer (%) c
0TMSOTf63525
−40→0TMSOTf75510
−60→0TMSOTf845–1010–15
−60→0BF3.OEt2845–105
−20→−10BF3.OEt276510
−35→0BF3.OEt270 d00
a Mixture of glycosylation products isolated by column chromatography; b Estimated (from 1H/13C-NMR) amount of the α-anomer; c Estimated amount (1H/13C-NMR) of glycerol epimerization; d Pure product 3 crystallized from the crude reaction mixture.
The optimized procedure paved the way for unlimited up-scaling (so far 3 can be obtained in multiple grams). With the access to 3 secured, the acetyl groups were removed under Zemplén conditions, and a 6'OTBDPS group selectively installed in 85% yield. As persistent protective groups benzyls were preferred in order to achieve a one-step global deprotection at the end of the synthesis. Removal of the cyclohexylidene protective group on 5 gave diol 6 (Scheme 2).
Scheme 2. Synthesis of gentiobiosyl building block 7.
Scheme 2. Synthesis of gentiobiosyl building block 7.
Molecules 18 13546 g005
Myristoylation followed by TBAF-mediated TBDPS removal gave 7 (Scheme 2). The hydrogenolytic debenzylation of 7 was performed in a dioxane/water/AcOH mixture using palladium black as the catalyst. The final glycolipid 15 could be purified by reverse phase silica gel column chromatography (Scheme 3). Removal of the TBDPS group in 5 afforded the pseudotrisaccharide acceptor 8 ready for the chain prolongation by glycosylation or, for example, introduction of a glycerol phosphate oligomer (S. aureus LTA) (Scheme 4).
Scheme 3. Global deprotection to give the glycolipids 15 (β-diglycolipid) and 16 (β-triglycolipid).
Scheme 3. Global deprotection to give the glycolipids 15 (β-diglycolipid) and 16 (β-triglycolipid).
Molecules 18 13546 g006
Scheme 4. Synthesis of pseudotetrasaccharide 10.
Scheme 4. Synthesis of pseudotetrasaccharide 10.
Molecules 18 13546 g007
As with the pseudotrisaccharide acceptor 8 benzyl groups were preferred as persistent protective groups in the donor 9 [28] (Scheme 4). A 6-O-TBDPS was again installed in order to allow future ligation to the repeating unit via a phosphate linkage for the C. difficile LTA synthesis. Since the benzyl groups in 9 do not participate under glycosylation conditions, the anomeric selectivity relied on the nitrile effect [29]. Therefore, the glycosylation of acceptor 8 with donor 9 was initially explored using MeCN as the solvent, but no selectivity was observed. Changing to propionitrile, which has a lower melting point, improved the selectivity to 1:3.5 (α:β). An attempted PhSiF3-catalyzed glycosylation [30] proved unsuccessful as no reaction occurred (Scheme 4). Due to the difficulties in separating the anomers, a more selective glycosylation was needed. To ensure high selectivity the benzyl protective groups were exchanged with benzoyl moieties, which are known to be more robust than acetyl groups under (Lewis) acidic conditions [31] Donor 12 was synthesized from per-O-acetyl glucose 11 in 6 steps with an overall yield of 65% (see Scheme 5). The glycosylation of gentiobiosyl acceptor 8 could then be performed uneventfully in CH2Cl2 giving 75% of the anomerically pure pseudotetrasaccharide 13 (Scheme 5).
Scheme 5. Synthesis of donor 12 [32] and its glycosylation with pseudotrisaccharide 8.
Scheme 5. Synthesis of donor 12 [32] and its glycosylation with pseudotrisaccharide 8.
Molecules 18 13546 g008
Debenzoylation was performed using 1-propanol in combination with potassium tert-butoxide in order to better dissolve the reactant and to simplify the purification by chromatography. Benzylation and deprotection of the cyclohexylidene followed by introduction of the myristoyl moieties to give the fully protected glycolipid in an overall good yield and excellent purity. Desilylation liberated the 6″O—the linkage point for the repeating unit, to give 14. To obtain the fully deprotected lipid anchor, the benzyl groups were hydrogenolyzed using palladium black in a THF/water/AcOH mixture (Scheme 3). Lipid anchor 16 was purified by reverse phase column chromatography to give the pure product in 81% yield.
The 1,2-di-O-myristoyl-3-O-α-d-glucopyranosyl-sn-glycerol 17 (Figure 1) was synthesized following the procedure developed for the synthesis of the lipid anchor from S. pneumonia [33] and 1,2-di-O-myristoyl-3-O-β-d-glucopyranosyl-sn-glycerol 18 (Figure 1) was synthesized from the peracetylated glucopyranosyl trichloroacetimidate donor following the procedure describe above for 3 [18]. Both glycoglycerolipids are also found in bacteria [34,35].
Figure 1. Glycolipids 17 (α-monoglycolipid) and 18 (β-monoglycolipid).
Figure 1. Glycolipids 17 (α-monoglycolipid) and 18 (β-monoglycolipid).
Molecules 18 13546 g001

2.2. Thermotropic Behavior of Glycoglycerolipid and Glycerophospholipids

Small unilamellar vesicles were prepared at various compositions (Table 2) and their thermotropic behavior was studied by differential scanning calorimetry (DSC), see Figure 2. A brief description of the method of preparation can be found in the supporting information. DSC measurements were performed in duplicates and ran through two cycles for up scans (10→70 °C) and down scans (70→10 °C) to evaluate whether there was any effect on the mixing behavior of the lipids triggered by the preparation method. The two up/down cycle scans showed no hysteresis effects, suggesting that the method of preparation did not have a significant effect on their thermotropic behavior.
Table 2. Composition of the lipid vesicle samples used for DSC studies in this work.
Table 2. Composition of the lipid vesicle samples used for DSC studies in this work.
Sample/mol%DMPCDMPSGlycoglycerolipid
Glycerophospholipids9280
1800100
1879813
1779813
1579813
1679813
For glycerophospholipids and for the pure β-monoglycolipid vesicles, a single endothermic peak occurs that corresponds to the first order gel-to-liquid disordered phase transition. The DSC thermograms for pure DMPC, DMPS and β-monoglycolipid vesicles (Supporting Information Figure 1) are in excellent agreement with previous literature [7,36,37]. Interestingly, the melting temperature for 1,2-di-O-tetradecyl-3-O-methyl-β-d-glucopyranosyl-sn-glycerol, a close analogue to β-mono-glycolipid 18, is dramatically higher (Tm = 60 °C) than for our β-monoglycolipid (Tm = 45 °C) [38] suggesting that the distance from the sugar unit to the lipid bilayer is a key parameter for the induction of high Tm.
Lipid mixtures can behave ideally or can have preferential interactions. For ideal mixtures, the ideal melting temperature, Tm,ideal, can be calculated from weighted average of each lipid Tm in the mixture. The mixing of DMPC and DMPS is ideal since Tm,experimental = 24.5 ± 0.2 °C is comparable to Tm,ideal = 24.3 °C. Ideal mixing for DMPC and DMPS has been previously proposed in the literature [39]. A different scenario is found for the glycerophospholipids-glycoglycerolipid mixtures, for which ideal mixing was only observed when the β-monoglycolipid 18 was used (Tm,ideal = 27 °C while Tm,experimental = 26.5 ± 0.2 °C). The shape of the peak, though, became more asymmetric suggesting that the phase transition was less cooperative than for DMPC-DMPS mixtures.
For the α-monoglycolipid 17, on the other hand, a dramatic non-ideal behavior was observed. In this case, three endothermic peaks are observed suggesting three major phase transitions. The same qualitative thermotropic behavior occurs for mixtures with β-di- or β-tri-glycolipids (15 and 16). DSC thermograms of structurally similar glycolipids gave a single endothermic transition at around 55–60 °C [6]. Therefore, the phase transition occurring about 57 °C should correspond to a glycolipid rich domain. The high Tm for glycolipids is typically ascribed to strong intermolecular interactions between their headgroups [6,7,8]
As mentioned above, the appearance of three endothermic peaks strongly indicates demixing in the lipid bilayers for all glycolipid used except for β-monoglycerolipid 18. For α-monoglycolipid 17, the first, second and third phase transition have a corresponding Tm,1st = 28, Tm,2nd = 44 and Tm,3rd = 57 °C respectively. The main difference in their DSC thermograms for β-di- or β-tri-glycolipid containing mixtures is a shift of the first peak of lower Tm,1st (24.5 ± 0.2 °C). For ideal glycolipid containing mixtures at the composition shown in Table 1, the Tm,ideal should be around 28.4 °C assuming the pure glycolipids to have a Tm,glycolipid = 58 °C.
Figure 2. DSC thermograms for (1) DMPS/DMPC, (2) DMPS/DMPC/β-monoglycolipid 18, (3) DMPS/DMPC/α-monoglycolipid 17, (4) DMPS/DMPC/β-diglycolipid 15, (5) DMPS/DMPC/β-triglycolipid 16. Vesicles at the compositions given in Table 1.
Figure 2. DSC thermograms for (1) DMPS/DMPC, (2) DMPS/DMPC/β-monoglycolipid 18, (3) DMPS/DMPC/α-monoglycolipid 17, (4) DMPS/DMPC/β-diglycolipid 15, (5) DMPS/DMPC/β-triglycolipid 16. Vesicles at the compositions given in Table 1.
Molecules 18 13546 g002
These are up-scans representative for duplicates of the same sample. Each sample was run on two up/down scan cycles and no major differences were observed on the thermograms.
There are several explanations to this strong demixing behavior. On one hand, there could be a split population of vesicles with very distinct lipid compositions. This is supported by the fact that the Tm,1st peak is so close to the Tm,ideal (28.4 °C) implying that there might exist a population of vesicles with an ideal behavior at least for α-monoglycolipid. The Tm for the second peak (Tm,2nd = 44 °C) and third peak (Tm,3rd = 57 °C) could potentially correspond to vesicles enriched with DMPS (Tm,DMPS = 39.5 °C) and glycolipids. Vesicles with distinct composition at the single molecule level have been detected earlier [40,41,42].
In an alternative scenario, each vesicle could contain several domains of distinct composition. In this case, the first peak should correspond to the main phase transition for a DMPC-enriched region. This is supported by the fact that for mixtures containing β-di- or β-tri-glycolipids (15 and 16), the Tm,1st shifts to lower values that are closer to the Tm,ideal (24.3 °C) assuming a domain composed only by DMPC and DMPS. Furthermore, domain formation is strongly supported by the highly asymmetric shape of the two peaks with highest Tm that typically imply poor cooperativity during the phase transition.
In our glycolipid containing mixtures, the strong hydrogen network formed by the glycolipids could induce domain formation that, upon increasing temperature, could undergo several transformations from a glycolipid rich gel phase into a smectic type phase (liquid ordered phase) and then finally into a liquid-disordered phase. Thus, the three phase transition observed for our mixtures with glycolipids (except for β-monoglycolipid 18) may correspond to the gel to liquid disordered melting of the DMPC rich phase (Tm,1s), the gel to liquid ordered melting of the glycolipid rich region (Tm,2nd), and finally the melting of this last domain into the liquid disordered phase (Tm,3rd). In this respect, glucose based surfactants can lead to more than one melting point in a bilayer caused by the hydrogen bonding ability of glucose head groups [43,44], and sub gel phases have also been observed for pure glycolipid vesicles in the past [7].
Glycolipids could potentially form complexes with lipids of smaller headgroup for which the large sugar head shadows smaller headgroups of these lipids leading to hydrophobic shielding in a mechanism similar to so-called “umbrella effect” [45]. The shift of Tm,1st to values closer to the pure Tm DMPC for the β-di and β-triglycolipid containing mixtures suggest there is a preferential complexation with DMPG for these cases. Indeed, phosphatidylserine (PS) lipids promote the incorporation of glycolipids in lipid bilayers while phosphatidylcholine (PC) inhibited their incorporation in fibroblasts [46].
Confocal scanning fluorescence microscopy was used to image our mixed vesicles containing β-diglycolipid 15, see Figure 3. In this case, giant unilamellar vesicles were prepared since they allow for visualization of micron sized long-lived domains using two different lipid dyes that partition preferentially in fluid (DiIC12) or gel (DiDC18) domains [47].
Details about the vesicle preparation are found in the experimental section and the chemical structures of these dyes are given in the Supporting Information. The vesicles are tethered to a surface to allow for imaging during prolonged times. However, the strength of binding to the surface was weakened upon increasing the temperature above 37 °C and thus we could only image below and above the peak for the first phase transition (that should correspond to the DMPC rich domain). The images show an uneven distribution of the dyes with regions enriched with the red dye (DiDC18), which grow in size with temperature: the uneven dye distribution indicates that domains of different fluidity exist at both temperatures. A vesicle composed mainly of DMPC-DMPS and displaying a single-phase transition should contain an uneven dye distribution at 22 °C and even dye distribution 37 °C, since at the onset of first phase transition occurs around 21 °C and is completed at 37 °C. Thus, these images clearly show that, at 37 °C, domains of distinct lipid composition and fluidity exist in a single vesicle. These domains should be either enriched in (i) glycerophospholipids (green areas)—and be probably in the liquid disordered phase—and (ii) enriched with glycoglycerolipids (red areas)—and probably in the gel phase.
Figure 3. Confocal scanning fluorescence microscopy images for giant unilamellar vesicles containing β-diglycolipid 15 at 22 °C (A) and 37 °C (B). Vesicles composed of DMPC/DMPS/5 labeled with 0.1% DiI C18 (green) and 0.1% DiIC18 (red) were prepared as described in the supporting information. Color merged images were shown.
Figure 3. Confocal scanning fluorescence microscopy images for giant unilamellar vesicles containing β-diglycolipid 15 at 22 °C (A) and 37 °C (B). Vesicles composed of DMPC/DMPS/5 labeled with 0.1% DiI C18 (green) and 0.1% DiIC18 (red) were prepared as described in the supporting information. Color merged images were shown.
Molecules 18 13546 g003
Finally, the thermotropic behavior of vesicles containing β-monoglycolipid differed significantly from the other glycolipids studied. In this case, almost ideal mixing was observed. The main structural difference is the configuration of the sugar group, which appears in a linear configuration or pointing straight away from the lipid bilayer occupying a smaller surface area. This conformation might impair hydrogen bonding with other glycolipids or lipids of smaller head-group (for instance DMPS) giving an ideal mixture in this case. This is supported by the significantly higher Tm found for the close analogue 1,2-Di-O-tetradecyl-3-O-methyl-β-d-glucopyranosul-sn-glycerol, for which only an extra methyl group allows for higher mobility of the headgroup. Earlier, it was suggested that differences in Tm of glycolipids could arise from the specific conformation of the sugar head-group and their capability to form hydrogen bonding with other lipids [48].

3. Experimental

3.1. Synthesis

All chemicals (Merck, Carbosynth, Sigma-Aldrich) were used as received and reactions were carried out dry, under an argon atmosphere, at ambient temperature, unless stated otherwise. Dry solvents were taken from a solvent purification system. Glassware used for water-free reactions were dried for 12 h at 120 °C before use. Column chromatography was performed on ROCC silica gel 60 (0.040–0.063 mm). TLC analysis was conducted on HPTLC aluminium sheets (Merck, silica gel 60, F245). Compounds were visualized by UV absorption (245 nm), by spraying with 20% H2SO4 in ethanol or with a solution of (NH4)6Mo7O24•4H2O 25 g/L and (NH4)4Ce(SO4)4•2H2O 10 g/L, in 10% aqueous H2SO4 followed by charring at +/− 150 °C. Optical rotation measurements ( Molecules 18 13546 i017) were performed on a Perkin Elmer 341 polarimeter (Sodium D-line, λ = 589 nm) with a concentration of 10 mg/ml (c = 1), unless stated otherwise. 1H- and 13C-NMR spectra were recorded with a Bruker 500 MHz spectrometer (500 and 125 MHz respectively). Chemical shifts (δ) are reported in ppm relative to the residual solvent signal of either CDCl3 (δ = 7.26 for 1H-NMR and 77.0 for 13C-NMR) or CD3OD (δ = 3.31 for 1H-NMR and 49.0 for 13C-NMR). NMR assignments were based on COSY and HSQC NMR experiments. High-resolution mass spectral (HRMS) data were obtained on an electrospray (ESI) mass spectrometer analyzing time-of-flight (Q-TOF instrument from Micromass).
Gentiobiosyl Derivative 3
Molecules 18 13546 i001
To a solution of gentiobiosyl trichloroacetimidate 2 (7.04 g, 9.01 mmol) and 1,2-O-cyclohexylidene-sn-glycerol (3.11 g, 18.0 mmol) in CH2Cl2 (75 mL) was added a batch of freshly activated powdered MS3Å and the resulting suspension stirred for 15 min. The mixture was cooled to −35 °C and a catalytic amount of boron trifluoride diethyl etherate (55.6 µL, 64 mg, 0.45 mmol) was added. The reaction was allowed to stir for 90 min while slowly warming up to 0 °C. Triethylamine (0.5 mL) was added and the slurry filtered over Celite. The filtrate was concentrated under reduced pressure and the residue crystallized from a mixture of EtOAc (150) and PE (500 mL), giving pseudotrisaccharide 3 (4.97 g, 6.29 mmol, 70%) as a white solid. Mp.: 190 °C; Molecules 18 13546 i017 (CHCl3): −15.8; 1H-NMR: δ = 1.33–1.43 (m, 2H, CH2 cyclohexylidene), 1.53–1.63 (m, 8H, 4 × CH2 cyclohexylidene), 1.98–2.10 (7 × s, 21H, 7 × CH3 acetyl), 3.59–3.71 (m, 4H, H-5, H-5', 2 × H-6), 3.78 (dd, 1H, J = 5.9 Hz, 8.3 Hz, CHH glycerol), 3.83–3.88 (m, 2H, CH2 glycerol), 3.99 (dd, 1H, J = 6.4 Hz, 8.2 Hz, CHH glycerol), 4.12 (dd, 1H, J = 2.3 Hz, 12.3 Hz, H-6'), 4.21–4.24 (m, 1H, CH glycerol), 4.27 (dd, 1H, J = 4.8 Hz, 12.4 Hz, H-6'), 4.57–4.61 (2 × d, 2H, J = 8.0 Hz, J = 8.0 Hz, H-1, H-1'), 4.87–5.01 (m, 3H, H-2, H-2', H-4), 5.07 (t, 1H, J = 9.7 Hz, H-4'), 5.15–5.21 (m, 2H, H-3, H-3'); 13C-NMR: δ = 20.6–20.7 (7 × CH3 acetyl), 23.8, 24.0, 25.1, 34.6, 36.2 (5 × CH2 cyclohexylidene), 61.8 (C-6'), 65.8 (CH2 glycerol), 68.1 (CH2 glycerol), 68.3 (C-4'), 68.9 (C-6), 69.1 (C-4), 71.1, 71.2 (C-2, C-2'), 72.0 (C-5'), 72.8 (C-3, C-3'), 73.3 (C-5), 73.9 (CH glycerol), 100.7, 100.8 (C-1, C-1'), 109.9 (Cq cyclohexylidene), 169.2, 169.3, 169.4, 169.6, 170.2, 170.2, 170.6 (7 × Cq acetyl); HRMS: C35H50O20 + Na+ requires 813.2788, found 813.2785.
Conversion of 3 to 5
Intermediate A
Molecules 18 13546 i002
To a solution of compound 3 (5.31 g, 6.72 mmol) in MeOH (67 mL) was added sodium methoxide (25% solution in MeOH, 0.50 mL) after which the mixture was stirred for 1 h. The reaction was quenched with amberlite H+ and filtered. The filtrate was concentrated in vacuo giving intermediate A (3.33 g, 6.71 mmol, 100%) as an amorphous off-white solid. Molecules 18 13546 i017 (MeOH): −24.1; 1H-NMR (CD3OD): δ = 1.37–1.46 (m, 2H, CH2 cyclohexylidene), 1.56–1.68 (m, 8H, 4 × CH2 cyclohexylidene), 3.18–3.25 (m, 2H, H-2, H-2'), 3.28–3.39 (m, 5H, H-3, H-3', H-4, H-4', H-5'), 3.45–3.49 (m, 1H, H-5), 3.62 (dd, 1H, J = 6.0 Hz, 10.6 Hz, CHH glycerol), 3.68 (dd, 1H, J = 5.3 Hz, 11.9 Hz, H-6'), 3.77–3.84 (m, 2H, H-6, CHH glycerol), 3.86–3.94 (m, 2H, H-6', CHH glycerol), 4.08 (dd, 1H, J = 6.4 Hz, 8.4 Hz, CHH glycerol), 4.16 (dd, 1H, J = 2.0 Hz, 11.5 Hz, H-6), 4.32 (d, 1H, J = 7.8 Hz, H-1), 4.33–4.37 (m, 1H, CH glycerol), 4.38 (d, 1H, J = 7.8 Hz, H-1'); 13C-NMR (CD3OD): δ = 24.8, 25.0, 26.2, 35.9, 37.5 (5 × CH2 cyclohexylidene), 62.7 (C-6'), 67.4 (CH2 glycerol), 69.9 (C-6), 71.4, 71.6 (C-4, C-4'), 71.6 (CH2 glycerol), 75.0, 75.1 (C-2, C-2'), 75.5 (CH glycerol), 77.0 (C-5'), 77.8 (C-5), 78.0 (C-3. C-3'), 104.7, 104.9 (C-1, C-1'), 111.1 (Cq cyclohexylidene); HRMS: C21H36O13 + Na+ requires 519.2048, found 519.2053.
Intermediate B
Molecules 18 13546 i003
To a solution of intermediate A (3.15 g, 6.34 mmol) and imidazole (1.73 g, 25.4 mmol) in DMF (49 mL) was added TBDPS-Cl (2.44 mL, 2.62 g, 9.52 mmol) after which the mixture was allowed to stir for 1 h. At this point a second batch of TBDPS-Cl (0.33 mL, 0.35g, 1.2 mmol) was added and the reaction stirred for 1h before it was quenched with MeOH (5 mL). The mixture was diluted with EtOAc (300 mL) and washed with water (150 mL). The aqueous layer was extracted once with EtOAc (50 mL) and the combined organic layers washed with water (250 mL) and brine (250 mL). The organic layer was dried with Na2SO4, filtered, and concentrated under reduced pressure. Purification of the residue by column chromatography (acetone/DCM/MeOH, 1/1/0 → 2/2/1) afforded mono-silylated intermediate B (3.95 g, 5.37 mmol, 85%) as a colourless oil. Molecules 18 13546 i017 (MeOH): −21.9; 1H-NMR (CD3OD): δ = 1.06 (s, 9H, tBu), 1.37–1.43 (m, 2H, CH2 cyclohexylidene), 1.55–1.62 (m, 8H, 4 × CH2 cyclohexylidene), 3.22–3.28 (m, 2H, H-2, H-2'), 3.35–3.45 (m, 5H, H-3, H-3', H-4, H-4', H-5'), 3.47–3.51 (m, 1H, H-5), 3.61 (dd, 1H, J = 6.0 Hz, 10.5 Hz, CHH glycerol), 3.76–3.82 (m, 2H, H-6, CHH glycerol), 3.89 (dd, 1H, J = 5.1 Hz, 11.1 Hz, H-6'), 3.93 (dd, 1H, J = 5.5 Hz, 10.5 Hz, CHH glycerol), 4.01–4.07 (m, 2H, H-6', CHH glycerol), 4.21 (dd, 1H, J = 2.0 Hz, 11.4 Hz, H-6), 4.30–4.35 (m, 2H, H-1, CH glycerol), 4.41 (d, 1H, J = 7.8 Hz, H-1'), 7.39–7.44 (m, 6H, Harom), 7.74–7.77 (m, 4H, Harom); 13C-NMR (CD3OD): δ = 20.2 (Cq tBu), 24.8, 25.0, 26.2 (3 × CH2 cyclohexylidene), 27.4 (3 × CH3 tBu), 35.9, 37.5 (2 × CH2 cyclohexylidene), 64.7 (C-6'), 67.4 (CH2 glycerol), 69.4 (C-6), 71.2, 71.4 (C-4, C-4'), 71.7 (CH2 glycerol), 75.0, 75.1 (C-2, C-2'), 75.5 (CH glycerol), 77.0 (C-5), 77.8 (C-5'), 78.2, 78.2 (C-3. C-3'), 104.7, 104.7 (C-1, C-1'), 111.0 (Cq cyclohexylidene), 128.8, 130.7, 130.8 (CHarom), 134.7, 134.9 (2 × Cq Ph), 136.7, 136.8, 136.9 (CHarom); HRMS: C37H54O13Si + Na+ requires 757.3226, found 757.3224.
Gentiobiosyl Derivative 5
Molecules 18 13546 i004
To a cooled (0 °C) solution of intermediate B (3.88 g, 5.28 mmol) in DMF (35 mL) were added benzyl bromide (5.65 mL, 8.13 g, 47.5 mmol) and sodium hydride (40% dispersion in mineral oil, 1.90 g, 47.5 mmol). After stirring for 1 h at rt the mixture was heated to 40 °C and allowed to stir at this temperature for 75 min before the reaction was quenched with MeOH (5 mL). The reaction was diluted with Et2O (150 mL) and washed with water (2 × 75 mL) and brine (75 mL). The organic layer was dried (Na2SO4), filtered and the volatiles removed under reduced pressure. Purification of the residue by column chromatography (Et2O/PE, 0/1 → 1/3) gave hexabenzylated derivative 5 (5.33 g, 4.18 mmol, 79%) as a pale yellow oil. Molecules 18 13546 i017 (CHCl3): +10.4; 1H-NMR: δ = 1.05 (s, 9H, t-Bu), 1.33–1.40 (m, 2H, CH2 cyclohexylidene), 1.51–1.58 (m, 8H, 4 × CH2 cyclohexylidene), 3.31 (dt, J = 2.8 Hz, 9.7 Hz, H-5'), 3.41–3.52 (m, 4H, H-2, H-2', H-4, CHH glycerol), 3.56–3.60 (m, 1H, H-5), 3.61-3.71 (m, 4H, H-3, H-3', H-6, CHH glycerol), 3.76 (t, 1H, J = 9.4 Hz, H-4'), 3.89–3.95 (m, 4H, 2 × H-6', 2 × CHH glycerol), 4.15–4.19 (m, 1H, CH glycerol), 4.23 (dd, 1H, J = 1.8 Hz, 11.4 Hz, H-6), 4.39 (d, 1H, J = 7.8 Hz, H-1), 4.47 (d, 1H, J = 7.8 Hz, H-1'), 4.54 (d, 1H, J = 11.2 Hz, CHH Bn), 4.68–4.83 (m, 6H, 3 × CH2 Bn), 4.88–4.95 (m, 4H, 2 × CH2 Bn), 5.01 (d, 1H, J = 11.2 Hz, CHH Bn), 7.16–7.42 (m, 36H, Harom), 7.69–7.72 (m, 2H, Harom), 7.76–7.78 (m, 2H, Harom); 13C-NMR: δ = 19.3 (Cq tBu), 23.8, 24.0, 25.1 (3 × CH2 cyclohexylidene), 26.8 (3 × CH3 tBu), 34.8, 36.4 (2 × CH2 cyclohexylidene), 62.7 (C-6'), 66.3 (CH2 glycerol), 68.2 (C-6), 70.3 (CH2 glycerol), 73.9 (CH glycerol), 74.8, 74.8, 74.9, 75.1 (4 × CH2 Bn), 75.2 (C-5), 75.6 (CH2 Bn), 75.7 (C-5’), 75.9 (CH2 Bn), 77.6 (C-4'), 78.1 (C-4), 82.1 (C-2), 82.4 (C-2'), 84.6, 84.9 (C-3, C-3'), 103.7 (C-1), 104.0 (C-1'), 109.9 (Cq cyclohexylidene), 127.4–128.4 (CHarom), 129.6, 129.6 (CHarom), 133.1, 133.6 (2 × Cq Ph), 135.6, 135.9 (CHarom), 138.1, 138.3, 138.4, 138.5, 138.6, 138.6 (6 × Cq Bn); HRMS: C79H90O13Si + Na+ requires 1297.6043, found 1297.6042.
Gentiobiosyl Derivative 6
Molecules 18 13546 i005
A solution of gentiobiosyl derivative 5 (223 mg, 0.175 mmol) in a mixture of acetic acid (5.5 mL), toluene (1.0 mL) and water (1.5 mL) was stirred for 3 h at 90 °C. After cooling down to rt the mixture was diluted with EtOAc (50 mL) and washed with water (2 × 25 mL), sat. aq. NaHCO3 (2 × 25 mL) and brine (25 mL). The organic layer was dried with Na2SO4, filtered and concentrated in vacuo, after which the residue was purified by column chromatography (Et2O/PE, 1/3 → 1/0) giving diol 6 (161 mg, 0.135 mmol, 77%) as a colourless oil. Molecules 18 13546 i017 (CHCl3): +10.3; 1H-NMR: δ = 1.05 (s, 9H, t-Bu), 3.33 (dt, J = 2.7 Hz, 9.6 Hz, H-5’), 3.39–3.44 (m, 3H, H-2, H-4, CHH glycerol), 3.48–3.52 (m, 1H, H-2'), 3.55 (dd, 1H, J = 4.0 Hz, 11.4 Hz, CHH glycerol), 3.59–3.77 (m, 8H, H-3, H-3', H-4', H-5, H-6, CH glycerol, 2 × CHH glycerol), 3.91–3.94 (m, 2H, 2 × H-6'), 4.19–4.22 (m, 1H, H-6), 4.38 (d, 1H, J = 7.8 Hz, H-1), 4.47 (d, 1H, J = 7.8 Hz, H-1'), 4.53 (d, 1H, J = 11.2 Hz, CHH Bn), 4.67 (d, 1H, J = 10.8 Hz, CHH Bn), 4.71–4.93 (m, 9H, 4 × CH2 Bn, CHH Bn), 4.97 (d, 1H, J = 11.0 Hz, CHH Bn) 7.16–7.40 (m, 36H, Harom), 7.68–7.70 (m, 2H, Harom), 7.73–7.76 (m, 2H, Harom); 13C-NMR): δ = 19.3 (Cq tBu), 26.8 (3 × CH3 tBu), 62.7 (C-6'), 63.5 (CH2 glycerol), 68.3 (C-6), 70.6 (CH glycerol), 73.2 (CH2 glycerol), 74.9, 74.9, 75.1, 75.1 (4 × CH2 Bn), 75.2 (C-5), 75.7 (CH2 Bn), 75.7 (C-5'), 75.8 (CH2 Bn), 77.7 (C-4'), 78.2 (C-4), 82.1 (C-2), 82.5 (C-2'), 84.6, 84.7 (C-3, C-3'), 103.9, 103.9 (C-1, C-1'), 127.6–128.1 (CHarom), 128.3–128.4 (CHarom), 129.6, 129.6 (CHarom), 133.1, 133.6 (2 × Cq Ph), 135.5, 135.9 (CHarom), 137.9, 138.2, 138.2, 138.4, 138.4, 138.5 (6 × Cq Bn); HRMS: C73H82O13Si + Na+ requires 1217.5417, found 1217.5424.
Conversion of 6 to 7
Intermediate C
Molecules 18 13546 i006
To a solution of diol 6 (149 mg, 0.125 mmol) and pyridine (0.101 mL, 99.2 mg, 1.25 mmol) in DCM (2.5 mL) were added myristoyl chloride (0.101 mL, 91.7 mg, 0.372 mmol) and a catalytic amount of 4-DMAP, respectively. After stirring for 5 h, methanol (1.0 mL) was added and after 10 min of stirring the volatiles were removed under reduced pressure. The residue was taken up in EtOAc (25 mL) and washed with aqueous 1M HCl (10 mL), sat. aq. NaHCO3 (10 mL) and brine (10 mL). The organic layer was dried (Na2SO4), filtered, and concentrated in vacuo. The residue was purified by column chromatography (Et2O/PE/Et3N, 0/1/0.01 → 1/4/0.05), giving intermediate C (160 mg, 99.0 µmol, 79%) as a colourless oil. Molecules 18 13546 i017 (CHCl3): +12.3; 1H-NMR): δ = 0.91 (t, 6H, J = 6.8 Hz, 2 × CH3 myristoyl), 1.08 (s, 9H, t-Bu), 1.21–1.37 (m, 40H, 20 × CH2 myristoyl), 1.53–1.61 (m, 4H, 2 × CH2 myristoyl), 2.20–2.29 (m, 4H, 2 × CH2 myristoyl), 3.32–3.36 (m, 1H, H-5'), 3.43–3.46 (m, 1H, H-2), 3.47–3.62 (m, 4H, H-2', H-4, H-5, CHH glycerol), 3.63–3.73 (m, 3H, H-3, H-3', H-6), 3.80 (t, 1H, J = 9.4 Hz, H-4'), 3.93–3.97 (m, 2H, 2 × H-6'), 4.00 (dd, 1H, J = 4.6 Hz, 10.8 Hz, CHH glycerol), 4.16 (dd, 1H, J = 7.1 Hz, 11.9 Hz, CHH glycerol), 4.23–4.28 (m, 2H, H-6, CHH glycerol), 4.37 (d, 1H, J = 7.8 Hz, H-1), 4.46 (d, 1H, J = 7.8 Hz, H-1'), 4.57 (d, 1H, J = 11.2 Hz, CHH Bn), 4.69–4.87 (m, 6H, 3 × CH2 Bn), 4.91–4.98 (m, 4H, 2 × CH2 Bn), 5.04 (d, 1H, J = 11.2 Hz, CHH Bn), 5.15–5.19 (m, 1H, CH glycerol), 7.17–7.44 (m, 36H, Harom), 7.71–7.74 (m, 2H, Harom), 7.77–7.81 (m, 2H, Harom); 13C-NMR): δ = 14.1 (2 × CH3 myristoyl), 19.3 (Cq tBu), 22.7 (2 × CH2 myristoyl), 24.8, 24.9 (2 × CH2 myristoyl), 26.8 (3 × CH3 tBu), 29.1–29.7 (16 × CH2 myristoyl), 31.9 (2 × CH2 myristoyl, 34.0, 34.2 (2 × CH2 myristoyl), 62.7, 62.7 (C-6', CH2 glycerol), 68.1 (CH2 glycerol), 68.3 (C-6), 69.8 (CH glycerol), 74.7, 74.8, 74.8 (3 × CH2 Bn), 75.0 (C-5), 75.1, 75.6 (2 × CH2 Bn), 75.7 (C-5'), 75.9 (CH2 Bn), 77.6 (C-4'), 78.0 (C-4), 81.9 (C-2), 82.3 (C-2'), 84.5, 84.8 (C-3, C-3'), 103.8, 104.0 (C-1, C-1'), 127.5–128.4 (CHarom), 129.5, 129.6 (CHarom), 133.1, 133.6 (2 × Cq Ph), 135.5, 135.9 (CHarom), 138.1, 138.3, 138.3, 138.5, 138.5, 138.6 (6 × Cq Bn), 172.9, 173.2 (2 × Cq myristoyl).
Protected Glycolipid 7
Molecules 18 13546 i007
To a solution of intermediate C (142 mg, 88.0 µmol) in THF (1.8 mL) was added TBAF (1.0 M solution in THF, 0.26 mL, 0.26 mmol). After stirring overnight at rt, the volatiles were removed under reduced pressure after which the residue was purified by column chromatography (Et2O/PE, 1/4 → 3/2). Semiprotected glycolipid 7 (105 mg, 76.4 µmol, 87%) was obtained as a colourless oil. Molecules 18 13546 i017 (CHCl3): +14.0; 1H-NMR: δ = 0.89 (t, 6H, J = 7.0 Hz, 2 × CH3 myristoyl), 1.23–1.33 (m, 40H, 20 × CH2 myristoyl), 1.53–1.61 (m, 4H, 2 × CH2 myristoyl), 2.10 (t, 1H, J = 6.4 Hz, 6'-OH), 2.20–2.29 (m, 4H, 2 × CH2 myristoyl), 3.35 (ddd, 1H, J = 2.7 Hz, 4.8 Hz, 9.6 Hz, H-5'), 3.39–3.58(m, 6H, H-2, H-2', H-4, H-4', H-5, CHH glycerol), 3.63–3.73 (m, 4H, H-3, H-3', H-6, H-6'), 3.83–3.88 (m, 1H, H-6'), 3.94 (dd, 1H, J = 4.6 Hz, 10.9 Hz, CHH glycerol), 4.10 (dd, 1H, J = 1.4 Hz, 11.3 Hz, H-6), 4.16 (dd, 1H, J = 7.0 Hz, 12.0 Hz, CHH glycerol), 4.27 (dd, 1H, J = 3.5 Hz, 12.0 Hz, CHH glycerol), 4.33 (d, 1H, J = 7.8 Hz, H-1), 4.47 (d, 1H, J = 7.8 Hz, H-1'), 4.55 (d, 1H, J = 11.1 Hz, CHH Bn), 4.65 (d, 1H, J = 11.0 Hz, CHH Bn), 4.69 (d, 1H, J = 11.1 Hz, CHH Bn) , 4.75–4.80 (m, 3H, CH2 Bn, CHH Bn), 4.82 (d, 1H, J = 10.9 Hz, CHH Bn), 4.87 (d, 1H, J = 11.0 Hz, CHH Bn), 4.91–4.96 (m, 4H, 2 × CH2 Bn), 5.15–5.19 (m, 1H, CH glycerol), 7.21–7.37 (m, 30H, Harom); 13C-NMR: δ = 14.1 (2 × CH3 myristoyl), 22.7 (2 × CH2 myristoyl), 24.9, 24.9 (2 × CH2 myristoyl), 29.1–29.7 (16 × CH2 myristoyl), 31.9 (2 × CH2 myristoyl, 34.1, 34.2 (2 × CH2 myristoyl), 62.0 (C-6'), 62.7 (CH2 glycerol), 68.0 (CH2 glycerol), 68.8 (C-6), 69.9 (CH glycerol), 74.7, 74.8, 74.9 (3 × CH2 Bn), 74.9 (C-5), 75.0 (CH2 Bn), 75.1 (C-5'), 75.7 (2 × CH2 Bn), 77.6 (C-4'), 77.8 (C-4), 81.9 (C-2), 82.1 (C-2'), 84.5, 84.6 (C-3, C-3'), 103.8 (C-1), 103.9 (C-1'), 127.6–128.4 (CHarom), 137.9, 138.0, 138.3, 138.3, 138.4, 138.5 (6 × Cq Bn), 173.0, 173.3 (2 × Cq myristoyl); HRMS: C85H116O15 + Na+ requires 1399.8206, found 1399.8209.
Gentiobiosyl Derivative 8
Molecules 18 13546 i008
To a solution of silyl ether 5 (2.84 g, 2.23 mmol) in THF (23 mL) was added TBAF (1.0 M solution in THF, 5.6 mL, 5.6 mmol) and the mixture stirred for 2 h before a second batch of TBAF (1.0 M solution in THF, 3.3 mL, 3.3 mmol) was added. After stirring overnight at rt, the volatiles were removed under reduced pressure and the residue was taken up in Et2O (100 mL) and washed with water (2 × 50 mL) and brine (50 mL). The organic layer was dried with Na2SO4, filtered, and concentrated in vacuo, after which the crude product was crystallized from MeOH, giving alcohol 8 (2.14 g, 2.06 mmol, 93%) as an amorphous white solid. M.p.: 104–105 °C; Molecules 18 13546 i017 (CHCl3): +13.9; 1H-NMR: δ = 1.28–1.43 (m, 2H, CH2 cyclohexylidene), 1.50–1.60 (m, 8H, 4 × CH2 cyclohexylidene), 2.13 (bs, 1H, 6'-OH), 3.33 (ddd, J = 2.6 Hz, 4.7 Hz, 9.5 Hz, H-5'), 3.40–3.48 (m, 4H, H-2, H-2', H-4, CHH glycerol), 3.50–3.56 (m, 2H, H-4', H-5), 3.60–3.75 (m, 5H, H-3, H-3', H-6, H-6', CHH glycerol), 3.81–3.86 (m, 1H, H-6'), 3.89 (dd, 1H, J = 4.9 Hz, 10.4 Hz, CHH glycerol), 3.93 (dd, 1H, J = 6.3 Hz, 8.2 Hz, CHH glycerol), 4.04–4.07 (m, 1H, H-6), 4.17–4.22 (m, 1H, CH glycerol), 4.35 (d, 1H, J = 7.8 Hz, H-1), 4.48 (d, 1H, J = 7.8 Hz, H-1'), 4.53 (d, 1H, J = 11.1 Hz, CHH Bn), 4.63 (d, 1H, J = 11.0 Hz, CHH Bn), 4.68 (d, 1H, J = 11.1 Hz, CHH Bn), 4.72–4.85 (m, 6H, 2 × CH2 Bn, CHH Bn), 4.89–4.94 (m, 4H, 2 × CH2 Bn), 7.18–7.39 (m, 30H, Harom); 13C-NMR: δ = 23.7, 23.9, 25.1 (3 × CH2 cyclo-hexylidene), 34.8, 36.4 (2 × CH2 cyclohexylidene), 62.0 (C-6’), 66.4 (CH2 glycerol), 68.9 (C-6), 70.3 (CH2 glycerol), 73.8 (CH glycerol), 74.7, 74.8, 74.9, 75.0 (4 × CH2 Bn), 75.0 (C-5), 75.1 (C-5'), 75.6, 75.6 (2 × CH2 Bn), 77.5 (C-4'), 77.9 (C-4), 82.0 (C-2), 82.1 (C-2'), 84.6, 84.6 (C-3, C-3'), 103.6 (C-1), 104.0 (C-1'), 109.9 (Cq cyclohexylidene), 127.6–128.4 (CHarom), 137.9, 138.0, 138.3, 138.3, 138.4, 138.5 (6 × Cq Bn); HRMS: C63H72O13 + Na+ requires 1059.4865, found 1059.4878.
Gentiotriosyl Derivative 13
Molecules 18 13546 i009
A solution of alcohol 8 (104 mg, 100 µmol) and donor 12 (96.3 mg, 110 µmol) in DCM (2.0 mL), containing freshly activated powdered MS3Å, was cooled to −35 °C. Boron trifluoride diethyl etherate (1.2 µL, 10 µmol) was added and the mixture was allowed to stir 2 h while slowly warming to 0 °C. Et3N (0.10 mL) was added, the mixture filtered over Celite and the volatiles removed under reduced pressure. The residue was purified by column chromatography (Et2O/PE, 1/9 → 1/1), giving pseudotetrasaccharide 13 (132 mg, 75 µmol, 75%) as a colourless oil. Molecules 18 13546 i017 (CHCl3): +3.9; 1H-NMR: δ = 1.03 (s, 9H, t-Bu), 1.23–1.40 (m, 2H, CH2 cyclohexylidene), 1.50–1.61 (m, 8H, 4 × CH2 cyclohexylidene), 3.35 (dd, 1H, J = 7.8 Hz, 9.1 Hz, H-2'), 3.38–3.44 (m, 6H, H-2, H-4, H-4', H-5, H-5', CHH glycerol), 3.52–3.56 (m, 1H, H-3'), 3.59–3.63 (m, 2H, H-3, H-6'), 3.70 (dd, 1H, J = 6.2 Hz, 8.2 Hz, CHH glycerol), 3.72–3.80 (m, 2H, H-5″, H-6), 3.85–3.87 (m, 2H, 2 × H-6″), 3.91–3.95 (m, 2H, 2 × CHH glycerol), 4.06–4.10 (m, 1H, H-6'), 4.17–4.25 (m, 2H, H-6, CH glycerol), 4.31 (d, 1H, J = 7.8 Hz, H-1), 4.39–4.43 (m, 2H, H-1', CHH Bn), 4.48 (d, 1H, J = 11.1 Hz, CHH Bn), 4.57 (d, 1H, J = 11.2 Hz, CHH Bn), 4.66–4.73 (m, 4H, 2 × CH2 Bn), 4.76 (d, 1H, J = 11.0 Hz, CHH Bn), 4.84 (d, 1H, J = 7.9 Hz, H-1″), 4.87 (d, 1H, J = 11.0 Hz, CHH Bn), 4.90–4.94 (m, 3H, CH2 Bn, CHH Bn), 5.57 (dd, 1H, J = 7.9 Hz, 9.7 Hz, H-2″), 5.62 (t, 1H, J = 9.7 Hz, H-4″), 5.81 (t, 1H, J = 9.7 Hz, H-3″), 7.10–7.13 (m, 2H, Harom), 7.16–7.41 (m, 42H, Harom), 7.51–7.54 (m, 1H, Harom), 7.57–7.59 (m, 2H, Harom), 7.70–7.72 (m, 2H, Harom), 7.81–7.87 (m, 4H, Harom), 7.89–7.92 (m, 2H, Harom); 13C-NMR: δ = 19.1 (Cq tBu), 23.8, 24.0, 25.1 (3 × CH2 cyclohexylidene), 26.6 (3 × CH3 tBu), 34.8, 36.4 (2 × CH2 cyclo-hexylidene), 62.8 (C-6″), 66.3 (CH2 glycerol), 68.0, 68.0 (C-6, C-6'), 69.2 (C-4″), 70.2 (CH2 glycerol), 72.1 (C-2″), 73.3 (C-3″), 73.9 (CH glycerol), 74.3 (C-5'), 74.5, 74.7, 74.8, 74.9 (4 × CH2 Bn), 75.2, 75.3 (C-5, C-5″), 75.5, 75.5 (2 × CH2 Bn), 77.4 (C-4'), 78.0 (C-4), 82.0 (C-2'), 82.0 (C-2), 84.6 (C-3), 84.7 (C-3'), 101.3 (C-1″), 103.5 (C-1), 103.9 (C-1'), 109.9 (Cq cyclohexylidene), 127.5–128.4 (CHarom), 128.9, 129.2, 129.4 (3 × Cq Bz), 129.6–129.8 (CHarom), 133.0 (Cq Ph), 133.0 (CHarom), 133.0 (Cq Ph), 133.1, 133.2 (CHarom), 135.5, 135.6 (CHarom), 138.1, 138.1, 138.4, 138.5, 138.5, 138.6 (6 × Cq Bn), 164.9, 164.9, 165.9 (3 × Cq Bz); HRMS: C106H112O21Si + Na+ requires 1771.7358, found 1771.7367.
Conversion of 13 to 14
Intermediate D
Molecules 18 13546 i010
To a solution of gentiotriosyl derivative 13 (840 mg, 0.480 mmol) in 1-propanol (10 mL) was added a catalytic amount of KOtBu after which the reaction was allowed to stir at rt for 2 h. Amberlite H+ resin was then added to the reaction until the pH was neutral and the resulting mixture filtered and concentrated under reduced pressure. Purification of the residue by column chromatography (EtOAc/PE, 1/9 → 1/2) gave intermediate D (600 mg, 0.417 mmol, 87%) as a colourless oil. Molecules 18 13546 i017 (CHCl3): +3.2; 1H-NMR: δ = 1.06 (s, 9H, t-Bu), 1.28–1.42 (m, 2H, CH2 cyclohexylidene), 1.50–1.61 (m, 8H, 4 × CH2 cyclohexylidene), 3.30 (dd, 1H, J = 8.0 Hz, 9.2 Hz, H-2″), 3.37–3.51 (m, 8H, H-2, H-2', H-3″, H-4, H-4', H-5', H-5″, CHH glycerol), 3.54–3.66 (m, 5H, H-3, H-3', H-4″, H-5, H-6'), 3.72–3.78 (m, 2H, H-6, CHH glycerol), 3.87–3.93 (m, 2H, 2 × H-6″), 3.93–4.00 (m, 2H, 2 × CHH glycerol), 4.04–4.09 (m, 2H, H-6, H-6'), 4.26–4.30 (m, 2H, H-1″, CH glycerol), 4.39 (d, 1H, J = 7.8 Hz, H-1), 4.47 (d, 1H, J = 7.8 Hz, H-1'), 4.52 (d, 1H, J = 11.1 Hz, CHH Bn), 4.59 (d, 1H, J = 11.1 Hz, CHH Bn), 4.68 (d, 1H, J = 11.1 Hz, CHH Bn), 4.73–4.79 (m, 4H, 2 × CH2 Bn), 4.84 (d, 1H, J = 11.0 Hz, CHH Bn), 4.89–4.94 (m, 4H, 2 × CH2 Bn), 7.18–7.43 (m, 36H, Harom), 7.69–7.72 (m, 4H, Harom); 13C-NMR: δ = 19.2 (Cq tBu), 23.8, 24.0, 25.1 (3 × CH2 cyclohexylidene), 26.8 (3 × CH3 tBu), 34.8, 36.5 (2 × CH2 cyclohexylidene), 64.7 (C-6″), 66.5 (CH2 glycerol), 66.9 (C-6'), 68.9 (C-6), 70.4 (CH2 glycerol), 71.9 (C-4″), 72.4 (C-2″), 73.8 (CH glycerol), 74.2 (C-5’), 74.8 (CH2 Bn), 74.8 (C-5″), 74.8 (CH2 Bn), 74.9 (C-5), 75.0, 75.0, 75.7, 75.7 (4 × CH2 Bn), 76.1 (C-3″), 77.9 (C-4'), 78.0 (C-4), 82.0 (C-2'), 82.1 (C-2), 84.6, 84.6 (C-3, C-3'), 102.9 (C-1″), 103.6 (C-1), 103.9 (C-1'), 110.0 (Cq cyclohexylidene), 127.6–128.4 (CHarom), 129.8, 129.8 (CHarom), 132.8 (Cq Ph), 132.9 (Cq Ph), 135.6, 135.6 (CHarom), 137.9, 137.9, 138.2, 138.3, 138.4, 138.5 (6 × Cq Bn); HRMS: C85H100O18Si + Na+ requires 1459.6571, found 1459.6587.
Intermediate E
Molecules 18 13546 i011
To a cooled (0 °C) solution of intermediate D (1.64 g, 1.14 mmol) in DMF (23 mL) were added benzyl bromide (0.814 mL, 1.17 g, 6.85 mmol) and sodium hydride (40% dispersion in mineral oil, 274 mg, 6.84 mmol), respectively. The mixture was stirred for 2 h, while slowly warming to room temperature, before methanol (2.0 mL) was added. After stirring for 15 min, water (50 mL) was added and the mixture extracted with Et2O (100 mL). The organic layer was washed with water (50 mL) and brine (50 mL) after which it was dried (Na2SO4), filtered, and concentrated in vacuo. Purification of the residue by column chromatography (Et2O/PE, 0/1 → 1/1) gave intermediate E (1.61 g, 0.943 mmol, 83%) as a colourless oil. Molecules 18 13546 i017 (CHCl3): +9.6; 1H-NMR: δ = 1.06 (s, 9H, t-Bu), 1.28–1.41 (m, 2H, CH2 cyclohexylidene), 1.50–1.61 (m, 8H, 4 × CH2 cyclohexylidene), 3.27–3.31 (m, 2H, H-4, H-5″), 3.36–3.41 (m, 2H, H-2', CHH glycerol), 3.45–3.49 (m, 2H, H-2″, H-5), 3.52–3.73 (m, 9H, H-2, H-3, H-3', H-3″, H-4, H-5', H-6, H-6', CHH glycerol), 3.78 (t, 1H, J = 9.3 Hz, H-4″), 3.89–3.94 (m, 4H, 2 × H-6″, 2 × CHH glycerol), 4.14–4.20 (m, 2H, H-6, CH glycerol), 4.25–4.29 (m, 1H, H-6'), 4.28 (d, 1H, J = 7.8 Hz, H-1'), 4.36 (d, 1H, J = 10.9 Hz, CHH Bn), 4.41 (d, 1H, J = 7.7 Hz, H-1), 4.56 (d, 1H, J = 11.4 Hz, CHH Bn), 4.59 (d, 1H, J = 7.9 Hz, H-1″), 4.63–4.81 (m, 9H, 4 × CH2 Bn, CHH Bn), 4.87–4.97 (m, 6H, 3 × CH2 Bn), 5.06 (d, 1H, J = 11.2 Hz, CHH Bn), 7.12-7.42 (m, 51H, Harom), 7.69–7.73 (m, 2H, Harom), 7.75–7.80 (m, 2H, Harom); 13C-NMR: δ = 19.3 (Cq tBu), 23.8, 24.0, 25.1 (3 × CH2 cyclohexylidene), 26.8 (3 × CH3 tBu), 34.9, 36.4 (2 × CH2 cyclohexylidene), 62.6 (C-6″), 66.3 (CH2 glycerol), 68.4, 68.4 (C-6, C-6'), 70.2 (CH2 glycerol), 73.9 (CH glycerol), 74.6 (C-5'), 74.6, 74.7, 74.8, 74.8, 74.9, 75.1 (6 × CH2 Bn), 75.4 (C-5″), 75.5, 75.7 (2 × CH2 Bn), 75.7 (C-5), 75.8 (CH2 Bn), 77.6 (C-4″), 78.0 (C-4), 78.2 (C-4'), 82.0 (C-2'), 82.2 (C-2″), 82.3 (C-2), 84.5, 84.8, 84.9 (C-3, C-3', C-3″), 103.5 (C-1'), 104.1 (C-1, C-1″), 109.9 (Cq cyclohexylidene), 127.5–128.4 (CHarom), 129.6, 129.6 (CHarom), 133.1 (Cq Ph), 133.7 (Cq Ph), 135.5, 135.9 (CHarom), 137.9–138.6 (9 × Cq Bn); HRMS: C106H118O18Si + Na+ requires 1729.7980, found 1729.7984.
Intermediate F
Molecules 18 13546 i012
A solution of intermediate E (1.46 g, 0.855 mmol) in a mixture of acetic acid (34 mL), toluene (8.6 mL) and water (8.6 mL) was stirred for 3 h at 90 °C. After cooling down to rt the mixture was diluted with EtOAc (250 mL) and washed with water (2 × 100 mL), sat. aq. NaHCO3 (2 × 100 mL) and brine (100 mL). The organic layer was dried with Na2SO4, filtered and concentrated in vacuo, after which the residue was purified by column chromatography (Et2O/PE, 1/9 → 2/1) giving semiprotected intermediate F (1.20 g, 0.737 mmol, 86%) as a colourless oil. Molecules 18 13546 i017 (CHCl3): +8.1; 1H-NMR: δ = 1.06 (s, 9H, t-Bu), 3.31–3.79 (m, 19H, H-2, H-2', H-2″, H-3, H-3', H-3″, H-4, H-4', H-4″, H-5, H-5', H-5″, H-6, H-6', 2 × CH2 glycerol, CH glycerol), 3.92–3.94 (m, 2H, 2 × H-6″), 4.16 (dd, 1H, J = 1.6 Hz, 11.6 Hz, H-6), 4.24–4.27 (m, 1H, H-6'), 4.29 (d, 1H, J = 7.8 Hz, H-1'), 4.36 (d, 1H, J = 10.9 Hz, CHH Bn), 4.47–4.51 (m, 2H, H-1, H-1″), 4.55 (d, 1H, J = 11.3 Hz, CHH Bn), 4.61 (d, 1H, J = 10.9 Hz, CHH Bn), 4.68–4.95 (m, 14H, 7 × CH2 Bn), 5.04 (d, 1H, J = 11.2 Hz, CHH Bn), 7.09–7.41 (m, 51H, Harom), 7.69–7.72 (m, 2H, Harom), 7.75–7.79 (m, 2H, Harom); 13C-NMR: δ = 19.3 (Cq tBu), 26.8 (3 × CH3 tBu), 62.7 (C-6″), 63.4 (CH2 glycerol), 68.2, 68.3 (C-6, C-6'), 70.7 (CH glycerol), 72.8 (CH2 glycerol), 74.8, 74.9, 74.9 (3 × CH2 Bn), 74.9, 75.0 (C-5, C-5'), 75.0, 75.0, 75.2 (3 × CH2 Bn), 75.5 (C-5″), 75.6, 75.6, 75.8 (3 × CH2 Bn), 77.7, 78.0, 78.3 (C-4, C-4', C-4″), 81.9, 82.1, 82.5 (C-2, C-2', C-2″), 84.5, 84.6, 84.7 (C-3, C-3', C-3″), 103.7, 104.0, 104.0 (C-1, C-1', C-1″), 127.5–128.4 (CHarom), 129.6, 129.6 (CHarom), 133.1 (Cq Ph), 133.6 (Cq Ph), 135.5, 135.9 (CHarom), 137.9–138.6 (9 × Cq Bn); HRMS: C100H110O18Si + Na+ requires 1649.7354, found 1649.7360.
Intermediate G
Molecules 18 13546 i013
To a solution of intermediate F (260 mg, 0.160 mmol) and pyridine (0.129 mL, 127 mg, 1.60 mmol) in DCM (3.2 mL) were added myristoyl chloride (0.130 mL, 118 mg, 0.478 mmol) and a catalytic amount of 4-DMAP, respectively. After stirring for 3 h, methanol (1.0 mL) was added and after 10 min of stirring the volatiles were removed under reduced pressure. The residue was taken up in EtOAc (25 mL) and washed with aqueous 1 M HCl (10 mL), sat. aq. NaHCO3 (10 mL) and brine (10 mL). The organic layer was dried (Na2SO4), filtered, and concentrated in vacuo. The residue was purified by column chromatography (Et2O/PE/Et3N, 0/1/0.01 → 1/1/0.02), giving intermediate G (293 mg, 0.143 mmol, 90%) as a colourless oil. Molecules 18 13546 i017 (CHCl3): +10.7; 1H-NMR: δ = 0.88 (t, 6H, J = 6.9 Hz, 2 × CH3 myristoyl), 1.04 (s, 9H, t-Bu), 1.19–1.29 (m, 40H, 20 × CH2 myristoyl), 1.51–1.58 (m, 4H, 2 × CH2 myristoyl), 2.18–2.26 (m, 4H, 2 × CH2 myristoyl), 3.25–3.68 (m, 11H, H-2, H-2', H-2″, H-3, H-3', H-4, H-4', H-5, H-5', H-5″, CHH glycerol), 3.63–3.68 (m, 3H, H-3″, H-6, H-6'), 3.76 (t, 1H, J = 9.3 Hz, H-4″), 3.90–3.93 (m, 3H, CHH glycerol, 2 × H-6″), 4.11 (dd, 1H, J = 7.3 Hz, 11.9 Hz, CHH glycerol), 4.16 (m, 1H, H-6), 4.20–4.27 (m, 3H, H-1', H-6', CHH glycerol), 4.36 (d, 1H, J = 11.0 Hz, CHH Bn), 4.39 (d, 1H, J = 7.7 Hz, H-1), 4.51 (d, 1H, J = 7.8 Hz, H-1″), 4.54 (d, 1H, J = 11.4 Hz, CHH Bn), 4.60–4.79 (m, 9H, 4 × CH2 Bn, CHH Bn), 4.85–4.96 (m, 6H, 3 × CH2 Bn), 5.04 (d, 1H, J = 11.2 Hz, CHH Bn), 5.12-5.15 (m, 1H, CH glycerol), 7.11–7.41 (m, 51H, Harom), 7.69–7.71 (m, 2H, Harom), 7.74–7.77 (m, 2H, Harom); 13C-NMR: δ = 14.1 (2 × CH3 myristoyl), 19.3 (Cq tBu), 22.7 (2 × CH2 myristoyl), 24.9, 24.9 (2 × CH2 myristoyl), 26.8 (3 × CH3 tBu), 29.1–29.7 (16 × CH2 myristoyl), 31.9 (2 × CH2 myristoyl, 34.1, 34.3 (2 × CH2 myristoyl), 62.6 (C-6″), 62.8 (CH2 glycerol), 68.0 (CH2 glycerol) 68.4, 68.5 (C-6, C-6'), 69.8 (CH glycerol), 74.6 (CH2 Bn), 74.6 (C-5'), 74.7, 74.8, 74.9, 74.9, 75.1 (5 × CH2 Bn), 75.2 (C-5), 75.5, 75.6 (2 × CH2 Bn), 75.7 (C-5″), 75.8 (CH2 Bn), 77.6 (C-4″), 78.0, 78.1 (C-4, C-4'), 81.8, 82.1, 82.3 (C-2, C-2', C-2″), 84.4, 84.8, 84.8 (C-3, C-3', C-3″), 103.6, 104.1, 104.2 (C-1, C-1', C-1″), 127.5–128.4 (CHarom), 129.6, 129.6 (CHarom), 133.1 (Cq Ph), 133.6 (Cq Ph), 135.5, 135.9 (CHarom), 138.0–138.6 (9 × Cq Bn), 172.9, 173.3 (2 × Cq myristoyl); HRMS: C128H162O20Si + Na+ requires 2071.1354, found 2071.1370.
Gentiotriosyl Derivative 14
Molecules 18 13546 i014
To a solution of intermediate G (274 mg, 0.134 mmol) in THF (2.7 mL) was added TBAF (1.0 M solution in THF, 0.40 mL, 0.40 mmol). After stirring overnight at rt, the volatiles were removed under reduced pressure after which the residue was purified by column chromatography (EtOAc/PE, 1/9 → 1/2). Semiprotected gentiotriosyl glycolipid 14 (205 mg, 0.113 mmol, 85%) was obtained as a colourless oil. Molecules 18 13546 i017 (CHCl3): +12.5; 1H-NMR: δ = 0.89 (t, 6H, J = 7.0 Hz, 2 × CH3 myristoyl), 1.19–1.34 (m, 40H, 20 × CH2 myristoyl), 1.51–1.59 (m, 4H, 2 × CH2 myristoyl), 2.17–2.25 (m, 4H, 2 × CH2 myristoyl), 3.26–3.69 (m, 15H, H-2, H-2', H-2″, H-3, H-3', H-3″, H-4, H-4', H-4″, H-5, H-5', H-5″, H-6, H-6″, CHH glycerol), 3.74 (dd, 1H J = 5.2 Hz, 11.1 Hz, H-6'), 3.83 (dd, 1H, J = 2.6 Hz, 11.9 Hz, H-6″), 3.92 (dd, 1H, J = 4.6 Hz, 10.9 Hz, CHH glycerol), 4.06–4.15 (m, 3H, H-6, H-6', CHH glycerol), 4.23–4.27 (m, 2H, H-1, CHH glycerol), 4.39–4.44 (m, 2H, H-1', CHH Bn), 4.46 (d, 1H, J = 7.8 Hz, H-1″), 4.55 (d, 1H, J = 11.2 Hz, CHH Bn), 4.62–4.68 (m, 3H, CH2 Bn, CHH Bn), 4.71–4.79 (m, 6H, 3 × CH2 Bn), 4.84 (d, 1H, J = 11.0 Hz, CHH Bn), 4.87–4.96 (m, 6H, 3 × CH2 Bn), 5.13–5.17 (m, 1H, CH glycerol), 7.16–7.36 (m, 45H, Harom); 13C-NMR: δ = 14.1 (2 × CH3 myristoyl), 22.7 (2 × CH2 myristoyl), 24.9, 24.9 (2 × CH2 myristoyl), 29.1–29.7 (16 × CH2 myristoyl), 31.9 (2 × CH2 myristoyl, 34.1, 34.3 (2 × CH2 myristoyl), 62.0 (C-6″), 62.8 CH2 glycerol), 68.0 (CH2 glycerol), 68.7 (C-6), 69.3 (C-6'), 69.8 (CH glycerol), 74.6 (C-5'), 74.6, 74.8, 74.8, 74.9, 74.9 (5 × CH2 Bn), 75.0 (C-5), 75.0 (CH2 Bn), 75.2 (C-5″), 75.6, 75.6, 75.7 (3 × CH2 Bn), 77.6, 78.0, 78.0 (C-4, C-4', C-4″), 81.8, 82.1, 82.1 (C-2, C-2', C-2″), 84.5, 84.5, 84.8 (C-3, C-3', C-3″), 103.5, 104.0, 104.2 (C-1, C-1', C-1″), 127.5–128.4 (CHarom), 137.9–138.5 (9 × Cq Bn), 172.9, 173.3 (2 × Cq myristoyl); HRMS: C112H144O20 + Na+ requires 1832.0143, found 1832.0149.
Glycolipid 15
Molecules 18 13546 i015
A solution of compound 7 (16.9 mg, 12.3 µmol) in a mixture of 1,4-dioxane/water/acetic acid (5/1/0.05, 2.0 mL) was purged with argon. Palladium black (~5 mg, ~50 µmol) was added and the reaction was stirred under hydrogen atmosphere for 2 days. The mixture was filtered over Celite and concentrated under reduced pressure. Purification of the residue by reversed phase column chromatography (C8 silica, H2O/iPrOH, 4/1 → 1/9) gave glycolipid 15 (4.9 mg, 5.9 µmol, 48%) as an amorphous white solid. 1H-NMR (CD3OD): δ = 0.90 (t, 6H, J = 7.0 Hz, 2 × CH3 myristoyl), 1.26–1.38 (m, 40H, 20 × CH2 myristoyl), 1.57–1.64 (m, 4H, 2 × CH2 myristoyl), 2.31–2.35 (m, 4H, 2 × CH2 myristoyl), 3.16–3.20 (m, 1H, H-2), 3.22 (dd, 1H, J = 7.9 Hz, 9.2 Hz, H-2'), 3.26–3.30 (m, 2H, H-4', H-5'), 3.32–3.37 (m, 3H, H-3, H-3', H-4), 3.44–3.48 (m, 1H, H-5), 3.67 (dd, 1H, J = 5.4 Hz, 11.8 Hz, H-6'), 3.74–3.78 (m, 2H, H-6, CHH glycerol), 3.87 (dd, 1H, J = 1.8 Hz, 11.9 Hz, H-6'), 3.99 (dd, 1H, J = 5.5 Hz, 11.0 Hz, CHH glycerol), 4.16 (dd, 1H, J = 2.0 Hz, 11.5 Hz, H-6), 4.22 (dd, 1H, J = 6.9 Hz, 12.1 Hz, CHH glycerol), 4.28 (d, 1H, J = 7.8 Hz, H-1), 4.37 (d, 1H, J = 7.8 Hz, H-1'), 4.43 (dd, 1H, J = 3.0 Hz, 12.1 Hz, CHH glycerol), 5.26–5.30 (m, 1H, CH glycerol); 13C-NMR (CD3OD): δ = 14.5 (2 × CH3 myristoyl), 23.8 (2 × CH2 myristoyl), 26.1, 26.1 (2 × CH2 myristoyl), 30.2–30.8 (16 × CH2 myristoyl), 33.1 (2 × CH2 myristoyl, 35.0, 35.2 (2 × CH2 myristoyl), 62.8 (C-6'), 64.0 CH2 glycerol), 68.9 (CH2 glycerol), 70.0 (C-6), 71.5 (C-4), 71.6 (C-4'), 71.8 (CH glycerol), 74.9 (C-2), 75.1 (C-2'), 77.1 (C-5), 77.8 (C-5'), 78.0, 78.0 (C-3, C-3'), 104.7 (C-1), 104.9 (C-1'), 174.9, 175.1 (2 × Cq myristoyl); HRMS: C43H80O15 + Na+ requires 859.5389, found 859.5378.
Glycolipid 16
Molecules 18 13546 i016
A solution of gentiotriosyl derivative 14 (46.8 mg, 25.9 µmol) in a mixture of THF/water/AcOH (5/1/0.05, 5.6 mL) was purged with argon. Palladium black (~5 mg, ~50 µmol) was added and the reaction was stirred under hydrogen atmosphere (1 bar) for 2 days. The mixture was filtered over Celite and concentrated under reduced pressure. Purification of the residue by reversed phase column chromatography (C8 silica, H2O/iPrOH, 4/1 → 1/9) gave glycolipid 16 (21.0 mg, 21.0 µmol, 81%) as an amorphous white solid. 1H-NMR (CD3OD): δ = 0.90 (t, 6H, J = 7.0 Hz, 2 × CH3 myristoyl), 1.26–1.37 (m, 40H, 20 × CH2 myristoyl), 1.56–1.65 (m, 4H, 2 × CH2 myristoyl), 2.30–2.36 (m, 4H, 2 × CH2 myristoyl), 3.17–3.38 (m, 10H, H-2, H-2', H-2″, H-3, H-3', H-3″, H-4, H-4', H-4″, H-5″), 3.45-3.52 (m, 2H, H-5, H-5'), 3.68 (dd, 1H, J = 5.3 Hz, 11.9 Hz, H-6″), 3.74–3.80 (m, 3H, H-6, H-6', CHH glycerol), 3.87 (dd, 1H, J = 1.9 Hz, 11.9 Hz, H-6″), 4.00 (dd, 1H, J = 5.5 Hz, 11.0 Hz, CHH glycerol), 4.13–4.18 (m, 2H, H-6, H-6'), 4.23 (dd, 1H, J = 7.0 Hz, 12.1 Hz, CHH glycerol), 4.30 (d, 1H, J = 7.8 Hz, H-1), 4.36–4.38 (m, 2H, H-1', H-1″), 4.44 (dd, 1H, J = 2.9 Hz, 12.1 Hz, CHH glycerol), 5.26–5.31 (m, 1H, CH glycerol); 13C-NMR (CD3OD): δ = 14.5 (2 × CH3 myristoyl), 23.8 (2 × CH2 myristoyl), 26.1, 26.1 (2 × CH2 myristoyl), 30.2–30.8 (16 × CH2 myristoyl), 33.1 (2 × CH2 myristoyl, 35.0, 35.2 (2 × CH2 myristoyl), 62.7 (C-6″), 64.1 CH2 glycerol), 68.9 (CH2 glycerol), 70.0, 70.6 (C-6, C-6'), 71.5, 71.6, 71.7, 71.8 (C-4, C-4', C-4″, CH glycerol), 74.9, 75.1, 75.1 (C-2, C-2', C-2″), 77.0, 77.0 (C-5, C-5'), 77.8, 77.9, 78.0, 78.0 (C-3, C-3', C-3″, C-5’″), 104.5, 104.9, 105.1 (C-1, C-1', C-1″), 174.9, 175.1 (2 × Cq myristoyl); HRMS: C49H90O20 + Na+ requires 1021.5918, found 1021.5899.

3.2. Physical Chemical Characterization

General

DMPC, DMPS and DOPE-Biotin (1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-cap biotinyl) were purchased from Avanti Polar Lipids, Inc. (Alabaster, AL, USA) and used without further purification. The fluorescent dyes DiDC18 (1,1'-dioctadecyl-3,3,3',3'-tetramethylindodicarbocyanine-4-chlorobenzenesulfonate) and DiIC12 (1,1'-didodecyl-3,3,3',3'-tetramethylindodicarbocyanineperchlorate) were likewise used as received from Invitrogen (Paisley, UK). Unless stated otherwise, all other chemicals and reagents were purchased from Sigma-Aldrich A/S (Copenhagen, Denmark). Milli-Q quality water was used in all preparations.

3.3. Methods

Small Unilamellar Vesicles were prepared from hydrating lipid films using PBS buffer (10 mM phosphate buffer supplemented with 100 mM NaCl, pH 7.4) to a lipid concentration of 1 mg mL−1. The vesicles were extruded through 100 nm polycarbonate filters using the Mini-Extruder system (Avanti Polar Lipids, Inc.). This method provides a high degree of unilamellar structures and long-term stability what makes them suitable for calorimetric measurements [49]. To achieve an even distribution of the lipids the extruder was heated to 52 °C ensuring DMPC and DMPS in their molten state. Each sample ran through two cycles of up scans (10–70 °C) and down scans (70–10 °C) to evaluate whether there was any effect on the mixing behavior of the lipids triggered by the preparation method. These scans showed no hysteresis effects suggesting that the method of preparation did not have a significant effect on their thermotropic behavior.
Giant Unilamellar Vesicles were prepared by gentle hydration of lipid films according to previous protocols [42]. Briefly, lipids in chloroform were mixed in glass tubes to achieve the indicated lipid composition. The lipid dyes DiD C(18), DiI C(12) (Invitrogen) were added to a concentration of 0.5 mol% for fluorescence imaging. Additionally, the vesicles contained 0.5 mol% DOPE-Biotin (Avanti Polar Lipids, Inc.) to tether the vesicles on the surface of the microscope slides. Then, a thin lipid film was prepared by drop-by-drop addition of the mixture to small Teflon cups. The remaining chloroform was removed by storing the Teflon cups in a vacuum-chamber for 1 h. Lipids were rehydrated in D-sorbitol solution (46.1 g L−1 in PBS) to a lipid concentration of 0.2 mg mL−1. After one night of incubation at 50 °C all vesicles were stored at 4 °C and used within the same day.
Microscope chambers were functionalized by carefully cleaning glass coverslips in successive washes in Helmanex (2%), MilliQ water and ethanol. For surface functionalization, 1 g L−1 BSA–biotin:BSA (1:10, weight ratio) was added to the surface and incubated at ambient temperature for 10 min. After five times gentle washing with PBS, streptavidin (0.025 g L−1 in PBS) was added and likewise incubated for 10 min followed by five times washing with PBS. After surface functionalization, giant unilamellar vesicles were added to the microscopy chamber to a final constant lipid concentration of 0.01 g L−1 (~14 µM) and allowed to stabilize for at least 30 min before the measurement. The total volume of the microscope chamber was kept to ~200 µL.
Differential Scanning Calorimetry (DSC) was performed in a MicroCalTM VP-DSC system (GE Healthcare Bio-Sciences AB, Uppsala, Sweden) and data were processed using Origin7 (Origin Lab, Northampton, MA, USA). Briefly, two up/down scan cycles were performed between 10 and 70 °C at a rate of 1 °C per 1.5 min, and duplicates were obtained for all samples studied. Prior to vesicle addition, the chambers were cleaned with plenty of 5% SDS solution followed by water, 1% pepsin solution, water and pure ethanol dried under vacuum. Then, 700 µL of the sample was filled in one chamber and buffer (PBS, 7.4 pH) as reference was filled in the other. The final lipid concentration was 1 mg/mL. Each sample ran through two scan cycles consisting of up scans (10–70 °C) and down scans (70–10 °C). The scan rate was set on 1 °C per 1.5 min. The experiments were taken out with the MicroCalTMVP-DSC system and the data processed with VPViewerTM2000 (GE Healthcare, Massachusetts, USA) as well as with Origin7 (OriginLab).
Microscopy imaging was performed on an inverted confocal microscope TCS SP5 (Leica, Wetzlar, Germany). In order to avoid crosstalk, DiD-C18 was excited with a laser and recorded using the filter 650/50 nm while DiI-C12 was excited using a laser and recorded using the filter at 480/50 nm. The signal was maximized setting the argon laser intensity to 19%, the acousto-Optic Tunable Filter for Attota to 21% and the PhotoMultiplier Voltage to 537.4 V. These settings were kept fixed during the various experiments in order to be able to perform fluorescence intensity comparison.

3.4. Fluorescence Microscopy Imaging

All glass slides were cleaned thoroughly due to sonication in Hellmannex for 1h. After sonication they were rinsed several times with water and ethanol. Additionally they were cleaned by etching and stored in 99% ethanol after. The glass slides were functionalyzed with 1 g/L BSA-Biotin: BSA (1:10) in PBS for 10 minutes. Five steps of washing with PBS followed before the slides were incubated with 0.25 g/L Streptavidin in PBS for another 10 min. After another five washing steps with PBS the GUVs were added to the surface with a final lipid concentration of 0.01 mg/L. The incubation time for the GUVs to settle to the glass amounted 30 min before they were analyzed. The samples were analyzed with the inverted Confocal Leica TCS SP5 and the images processed with the software Leica LAS AF (Leica Microsystems CMS, Mannheim, Germany).

4. Conclusions

The synthesis of glycoglycerolipids from ready available starting materials has been investigated and an improved procedure for the synthesis of gentiobiosyl glycolipids on larger scales has been investigated. The amount of side products formed in the glycosylation of cyclohexylidene protected glycerol have been limited by optimizing the reaction conditions. Conditions for the crystallization of the glycosylation product from the crude reaction mixture were developed and tedious chromatography can therefore be avoided allowing for up scaling. Prolonging the “head group” was performed by a selective deprotection of the 6'O-TBDPS group followed by glycosylation with benzoylated donor 12 giving the pseudotetrasaccharide in high yield and purity, with a 6″O-TBDPS protective group installed for further prolongation or attachment to a repeating unit via a phosphate linkage as it is found in LTA from C. difficile.
Our DSC/microscopy results suggest that glycolipids induce strong de-mixing in lipid mixtures and that the demixing ability depends on the conformation of the head-group as determined by the type of glycosidic bond and the number of sugar residues in the glycolipid headgroup. Indeed, glycolipids are believed to form lipid clusters for maximum efficiency of their biological roles that include participation in signaling pathways and in receptor recognition [50,51]. Our results suggest that the larger the number of sugars in the glycolipid headgroup, the stronger the demixing induced and that some preferential association occurs in which DMPC is excluded from the glycolipid rich regions domains.

Supplementary Materials

Supplementary materials can be accessed at: https://www.mdpi.com/1420-3049/18/11/13546/s1.

Acknowledgments

We thank FTP for financial support, Kell Mortensen for access to the Differential Scanning Calorimeter and the Center for Advanced Bioimaging (CAB) Denmark, University of Copenhagen for access to the confocal microscope.

Conflicts of Interest

The authors declare no conflict of interest.

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  • Sample Availability: Samples of the compounds are available from the authors.

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MDPI and ACS Style

Hogendorf, W.F.J.; Jagalski, V.; Pomorski, T.G.; Bols, M.; Cárdenas, M.; Pedersen, C.M. Synthesis and Thermotropic Phase Behavior of Four Glycoglycerolipids. Molecules 2013, 18, 13546-13573. https://doi.org/10.3390/molecules181113546

AMA Style

Hogendorf WFJ, Jagalski V, Pomorski TG, Bols M, Cárdenas M, Pedersen CM. Synthesis and Thermotropic Phase Behavior of Four Glycoglycerolipids. Molecules. 2013; 18(11):13546-13573. https://doi.org/10.3390/molecules181113546

Chicago/Turabian Style

Hogendorf, Wouter F. J., Vivien Jagalski, Thomas G. Pomorski, Mikael Bols, Marité Cárdenas, and Christian M. Pedersen. 2013. "Synthesis and Thermotropic Phase Behavior of Four Glycoglycerolipids" Molecules 18, no. 11: 13546-13573. https://doi.org/10.3390/molecules181113546

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