Database and Motifs | High-scoring Motif Occurences | Debugging Information | Results in TSV Format | Results in GFF3 Format |
FIMO version 5.2.0, (Release date: Wed Oct 14 12:02:54 2020 -0700)
For further information on how to interpret these results please access http://meme-suite.org//doc/fimo-output-format.html.
To get a copy of the FIMO software please access http://meme-suite.org
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE ./bZIP_intersect_summits.fasta
Database contains 5670 sequences, 2835000 residues
MOTIFS db/ARABD/ArabidopsisDAPv1.meme (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
ABI3VP1_tnt.AT5G18090_col_a_m1 | 15 | GATGATGAAGAAAAG |
ABI3VP1_tnt.AT5G25475_col_a_m1 | 6 | CAAGCA |
ABI3VP1_tnt.AT5G60130_col_a_m1 | 19 | AAGCAAAAAATAAGCAAAA |
ABI3VP1_tnt.AT5G60130_colamp_a_m1 | 21 | TTTTTGCTTATTTTTTGCTTA |
ABI3VP1_tnt.FUS3_col_a_m1 | 15 | ATATACATGCATGCA |
ABI3VP1_tnt.NGA4_col_a_m1 | 16 | CCTGTTCAGGTGATTT |
ABI3VP1_tnt.REM16_col_a_m1 | 21 | TTTACGTTTTTGGCGGGAAAA |
ABI3VP1_tnt.VRN1_col_a_m1 | 29 | TTTTTTTTTTTTTTTTTTTTTTTTTTTTC |
ABI3VP1_tnt.VRN1_colamp_a_m1 | 19 | CTGTTTTTTTTTTTTTTTT |
AP2EREBP_tnt.ABR1_col_a_m1 | 19 | GGCGGAAATGGCGGCGGCG |
AP2EREBP_tnt.ABR1_colamp_a_m1 | 21 | CACCGCCGCCGCCATTTCCGC |
AP2EREBP_tnt.AIL7_col_a_m1 | 11 | CGATTCCCGAG |
AP2EREBP_tnt.AIL7_colamp_a_m1 | 12 | ACGAATCCCGAG |
AP2EREBP_tnt.AT1G01250_col_a_m1 | 15 | GATATTGTCGGTGGT |
AP2EREBP_tnt.AT1G01250_colamp_a_m1 | 15 | TGTCGGTGGAGATGA |
AP2EREBP_tnt.AT1G12630_col_a_m1 | 21 | CGCCGCCGCCTTCGCCGACAA |
AP2EREBP_tnt.AT1G12630_colamp_a_m1 | 16 | GATTTTGTCGGCAAAA |
AP2EREBP_tnt.AT1G28160_col_a_m1 | 15 | TGGCGGCGGCGGTGG |
AP2EREBP_tnt.AT1G28160_colamp_a_m1 | 14 | CGCCGCCGCCGCCA |
AP2EREBP_tnt.AT1G44830_col_a_m1 | 15 | CCACCTCCACCGCCA |
AP2EREBP_tnt.AT1G71450_col_a_m1 | 20 | CACCGCCGCCGCCACCGCCA |
AP2EREBP_tnt.AT1G71450_colamp_a_m1 | 13 | CCTCCACCGTCAC |
AP2EREBP_tnt.AT1G77200_col_a_m1 | 14 | CCACCGACAAATTC |
AP2EREBP_tnt.AT1G77200_colamp_a_m1 | 12 | ATTGTCGGTGAA |
AP2EREBP_tnt.AT3G16280_col_a_m1 | 14 | TATTGTCGGTGGAG |
AP2EREBP_tnt.AT3G16280_colamp_a_m1 | 14 | CCACCGACAATTTT |
AP2EREBP_tnt.AT3G57600_col_a_m1 | 11 | CCGCCACCGCC |
AP2EREBP_tnt.AT3G60490_col_a_m1 | 14 | AATATTGTCGGTGG |
AP2EREBP_tnt.AT3G60490_colamp_a_m1 | 16 | AAAATTGTCGGTGGAG |
AP2EREBP_tnt.AT4G18450_col_a_m1 | 17 | GCGGCGGCGGCGGCGGC |
AP2EREBP_tnt.At1g19210_col_a_m1 | 14 | ATGGACGGTGGAGG |
AP2EREBP_tnt.At1g19210_colamp_a_m1 | 15 | CATCTCCACCGTCCA |
AP2EREBP_tnt.At1g22810_col_m1 | 15 | GGCGGTGGCGGTGGA |
AP2EREBP_tnt.At1g22810_colamp_a_m1 | 15 | CGCCACCGACACAGC |
AP2EREBP_tnt.At1g36060_col_a_m1 | 14 | ATGGTCGGTGGAGG |
AP2EREBP_tnt.At1g36060_colamp_a_m1 | 14 | CCTCCACCGACCAT |
AP2EREBP_tnt.At1g75490_col_a_m1 | 15 | CCACCTCCACCGCCA |
AP2EREBP_tnt.At1g75490_colamp_a_m1 | 15 | CACCTCCACCGCCAC |
AP2EREBP_tnt.At1g77640_col_a_m1 | 21 | GGTGGTGGTGGTGTCGGTGGA |
AP2EREBP_tnt.At2g33710_col_m1 | 15 | CCTCCGCCGCCGCCA |
AP2EREBP_tnt.At2g33710_colamp_a_m1 | 18 | TCCGCCGCCGCCACCTCC |
AP2EREBP_tnt.At2g44940_col_a_m1 | 15 | AATTGTCGGTGGAGT |
AP2EREBP_tnt.At2g44940_colamp_a_m1 | 13 | ATTGTCGGTGGAG |
AP2EREBP_tnt.At4g16750_col_a_m1 | 15 | CACCGCCACCGACAC |
AP2EREBP_tnt.At4g16750_colamp_a_m1 | 17 | AGTGTCGGTGGAAATAA |
AP2EREBP_tnt.At4g28140_col_a_m1 | 20 | GGCGGTGGAGGCGGTGGTGG |
AP2EREBP_tnt.At4g28140_colamp_a_m1 | 15 | GGTCGGTGGAGGTGG |
AP2EREBP_tnt.At4g31060_col_a_m1 | 20 | CCACCGACAAAACCACCACC |
AP2EREBP_tnt.At4g31060_colamp_a_m1 | 15 | ATTTTGTCGGTGGAG |
AP2EREBP_tnt.At4g32800_col_m1 | 16 | CTCCACCGACAATTTC |
AP2EREBP_tnt.At4g32800_colamp_a_m1 | 16 | AATTTTGTCGGTGGAT |
AP2EREBP_tnt.At5g18450_col_a_m1 | 15 | GGTGGAGGCGGTGGA |
AP2EREBP_tnt.At5g65130_col_a_m1 | 15 | CCACCGCCGCCGCCA |
AP2EREBP_tnt.At5g65130_colamp_a_m1 | 19 | CCACCACCTCCACCGACAA |
AP2EREBP_tnt.At5g67000_col_a_m1 | 15 | CTGTTGCGGCGGCGG |
AP2EREBP_tnt.CBF1_col_a_m1 | 12 | TTCGCCGACATC |
AP2EREBP_tnt.CBF1_colamp_a_m1 | 15 | TGATGTCGGCGAAGA |
AP2EREBP_tnt.CBF2_col_a_m1 | 15 | TCTTTGCCGACATCA |
AP2EREBP_tnt.CBF2_colamp_a_m1 | 13 | TTATGTCGGCAAA |
AP2EREBP_tnt.CBF3_col_a_m1 | 14 | CTTCACCGACATAA |
AP2EREBP_tnt.CBF3_colamp_a_m1 | 11 | TATGTCGGTAA |
AP2EREBP_tnt.CBF4_col_a_m1 | 13 | TGATGTCGGCGAA |
AP2EREBP_tnt.CBF4_colamp_a_m1 | 12 | TGATGTCGGCAA |
AP2EREBP_tnt.CEJ1_col_a_m1 | 15 | CCACCTCCACCGACA |
AP2EREBP_tnt.CEJ1_colamp_a_m1 | 13 | AATCACCGACAAT |
AP2EREBP_tnt.CRF10_col100_a_m1 | 15 | CCGCCGCCGCCGCCA |
AP2EREBP_tnt.CRF10_colamp_a_m1 | 17 | ATAGAATCTTAGATTCT |
AP2EREBP_tnt.CRF4_col_a_m1 | 21 | CCTCCGCCGCCGCCGCCGCCG |
AP2EREBP_tnt.CRF4_colamp_a_m1 | 15 | TGGCGGCGGCGGCGG |
AP2EREBP_tnt.DDF1_col_a_m1 | 15 | TGATGTCGGCGACGA |
AP2EREBP_tnt.DDF1_colamp_a_m1 | 13 | TCTTCGCCGACAT |
AP2EREBP_tnt.DDF2_col_a_m1 | 15 | TGATGTCGGCGAAGA |
AP2EREBP_tnt.DEAR2_col_a_m1 | 15 | CCACCGCCACCGACA |
AP2EREBP_tnt.DEAR2_colamp_a_m1 | 15 | ATGTCGGTGGCGGTG |
AP2EREBP_tnt.DEAR3_col_a_m1 | 17 | AATTGTCGGTGGTGGCA |
AP2EREBP_tnt.DEAR3_colamp_a_m1 | 13 | ATTGTCGGTGATT |
AP2EREBP_tnt.DEAR5_col_a_m1 | 19 | CTTCATCACCACCGACAAT |
AP2EREBP_tnt.DEAR5_colamp_a_m1 | 11 | ATTGTCGGTGA |
AP2EREBP_tnt.DREB19_col_a_m1 | 17 | CACCTCCACCGACATTA |
AP2EREBP_tnt.DREB19_colamp_a_m1 | 14 | TTAAACCGACATTA |
AP2EREBP_tnt.DREB26_col_a_m1 | 20 | CCACCACCACCTCCACCGAC |
AP2EREBP_tnt.DREB2_col_a_m1 | 21 | TGGTTATGTCGGTGGAGGTGG |
AP2EREBP_tnt.DREB2_colamp_a_m1 | 15 | TCTCCACCGACATAA |
AP2EREBP_tnt.ERF104_col_a_m1 | 19 | CGCCGCCGCCGCCGCCGCC |
AP2EREBP_tnt.ERF104_colamp_a_m1 | 15 | TGGCGGCGGCGGCGG |
AP2EREBP_tnt.ERF105_col_m1 | 15 | GTGGCGGCGGCGGAG |
AP2EREBP_tnt.ERF105_colamp_a_m1 | 24 | CCGCCGCCGCCGCCGCCGCCGCCG |
AP2EREBP_tnt.ERF10_col_a_m1 | 21 | TCCACCGCCTCCGCCGCCGCC |
AP2EREBP_tnt.ERF10_colamp_a_m1 | 20 | CGGCGGAAATGGCGGCGGAG |
AP2EREBP_tnt.ERF115_col_a_m1 | 15 | CCGCCGCCACCGCCG |
AP2EREBP_tnt.ERF115_colamp_a_m1 | 15 | GCGATGGCGGCGGCG |
AP2EREBP_tnt.ERF11_col_b_m1 | 15 | CCACCGCCGCCGCCA |
AP2EREBP_tnt.ERF11_colamp_a_m1 | 20 | GGAAATGGCGGCGGCGGAGG |
AP2EREBP_tnt.ERF13_col_b_m1 | 15 | CTCCGCCGCCATTTC |
AP2EREBP_tnt.ERF13_colamp_a_m1 | 15 | AAATGGCGGCGGAGG |
AP2EREBP_tnt.ERF15_col_m1 | 15 | CGCCTCCGCCGCCGC |
AP2EREBP_tnt.ERF15_colamp_a_m1 | 18 | CGCCGCCTCAGCCGCCAT |
AP2EREBP_tnt.ERF1_col_a_m1 | 28 | CCGCCTCCGCCGCCACCACCGCCGCCGC |
AP2EREBP_tnt.ERF1_colamp_a_d1 | 8 | CGGCGGCG |
AP2EREBP_tnt.ERF2_col_a_m1 | 21 | CCGCCGCCTCCGCCGCCGCCA |
AP2EREBP_tnt.ERF2_colamp_a_m1 | 21 | CCGCCGCCGCCTCCGCCGCCA |
AP2EREBP_tnt.ERF38_col_a_m1 | 15 | TGTCGGTGGAGGTGG |
AP2EREBP_tnt.ERF3_col_a_m1 | 15 | TGGCGGCGGCGGTGG |
AP2EREBP_tnt.ERF3_colamp_a_m1 | 20 | TGGCGGCGGCGGCGGCGGCG |
AP2EREBP_tnt.ERF48_col_a_m1 | 21 | GGCGGTGGTGGTGGCGGTGGA |
AP2EREBP_tnt.ERF4_col_a_m1 | 15 | CCTCCGCCGCCATTT |
AP2EREBP_tnt.ERF4_colamp_a_m1 | 20 | GGAAATGGCGGCGGAGGTGG |
AP2EREBP_tnt.ERF5_col_a_m1 | 15 | CCACCGCCGCCGCCA |
AP2EREBP_tnt.ERF5_colamp_a_m1 | 21 | CCGCCGCCGCCGCCGCCGCCG |
AP2EREBP_tnt.ERF6_col_m1 | 21 | CCGCCGCCGCCGCCGCCACCG |
AP2EREBP_tnt.ERF73_col_a_m1 | 21 | CCACCGCCGCCGCCATTTCCG |
AP2EREBP_tnt.ERF73_colamp_a_m1 | 21 | ATGGCGGCGGCGGCGGCGGCG |
AP2EREBP_tnt.ERF7_col_a_m1 | 21 | CCACCGCCTCCGCCGCCGCCA |
AP2EREBP_tnt.ERF7_colamp_a_m1 | 21 | ATGGCGGCGGAGGTGGCGGAG |
AP2EREBP_tnt.ERF8_col_a_m1 | 15 | TCCTCCGCCGCCGCC |
AP2EREBP_tnt.ERF8_colamp_a_m1 | 18 | AAAATGGCGGCGGAGGTG |
AP2EREBP_tnt.ERF9_col_a_m1 | 21 | CGGCGGCGGTGGCGGCGGCGG |
AP2EREBP_tnt.ERF9_colamp_a_m1 | 17 | TCCTCCGCCGCCATTTT |
AP2EREBP_tnt.ESE1_col_a_m1 | 15 | CGGCGGCGGCGGCGG |
AP2EREBP_tnt.ESE1_colamp_a_m1 | 20 | GGCGGCGGCGGCGGCGGCGG |
AP2EREBP_tnt.ESE3_col_a_m1 | 19 | CGGAGGTGGCGGCGGAGGA |
AP2EREBP_tnt.ESE3_colamp_a_m1 | 15 | GTGGCGGCGGCGGAG |
AP2EREBP_tnt.LEP_col_a_m1 | 21 | TCCGCCGCCGCCACCGCCGCC |
AP2EREBP_tnt.PLT1_col_a_m1 | 19 | GGCACGGATCCCGAGGAAA |
AP2EREBP_tnt.PLT1_colamp_a_m1 | 14 | GCACGAATCCCGAG |
AP2EREBP_tnt.PLT3_col_a_m1 | 15 | CCTCGGGATTCGTGC |
AP2EREBP_tnt.PUCHI_col_a_m1 | 15 | CCGCCGCCGCCGCCA |
AP2EREBP_tnt.PUCHI_colamp_a_m1 | 25 | GCGGCGGTGGCGGCGGCGGCGGAGG |
AP2EREBP_tnt.RAP211_col_a_m1 | 15 | CCGCCGCCGCCGGCG |
AP2EREBP_tnt.RAP211_colamp_a_m1 | 15 | TTTTGGCCGGCTATT |
AP2EREBP_tnt.RAP212_col_a_m1 | 21 | CGGCGGAAATGGCGGCGGAGG |
AP2EREBP_tnt.RAP21_col_a_m1 | 13 | GTGTCGGTGGTGG |
AP2EREBP_tnt.RAP21_colamp_a_m1 | 20 | CCTCCACCGACATTTCCACC |
AP2EREBP_tnt.RAP26_col_a_m1 | 15 | TGGCGGCGGCGGAGG |
AP2EREBP_tnt.RAP26_colamp_a_d1 | 6 | CGCCGC |
AP2EREBP_tnt.RRTF1_col_a_m1 | 15 | GAAATTGCGGCGGCG |
AP2EREBP_tnt.RRTF1_colamp_a_m1 | 19 | GGAAATTGCGGCGGCGGTG |
AP2EREBP_tnt.Rap210_col_a_m1 | 15 | TTTTGTCGGCAAAGG |
AP2EREBP_tnt.Rap210_colamp_a_m1 | 14 | TTTGTCGGCAAAAA |
AP2EREBP_tnt.SHN3_col_a_m1 | 21 | TCCGCCGCCGCCGCCGCCGCC |
AP2EREBP_tnt.TINY_col_a_m1 | 15 | CTCCACCGACAAAAT |
ARF_ecoli.MP_col_m1 | 10 | GCCGACAAAA |
ARF_tnt.ARF16_col_b_m1 | 21 | TTTACGTTTTTGGCGGGAAAA |
ARF_tnt.ARF2_col_v31_m1 | 10 | ATCCGACAAA |
ARID_tnt.AT1G04880_col_a_m1 | 16 | TATATTATATAGTTTT |
ARID_tnt.AT1G04880_colamp_a_m1 | 15 | AAACTATATAATATA |
ARID_tnt.AT1G20910_col_a_m1 | 11 | AAATTTAATTT |
ARID_tnt.AT2G17410_col_a_m1 | 15 | AAATTAAAATTAAAT |
ARID_tnt.At1g76110_col_a_m1 | 11 | ATAATTTAATT |
ARID_tnt.At1g76110_colamp_a_m1 | 15 | ATTAATAATTTAATT |
ARID_tnt.At3g13350_col_a_d1 | 6 | TTATTA |
BBRBPC_tnt.BPC1_col_a_m1 | 24 | GAGAGAGAGAGAGAGAGAGAGAGA |
BBRBPC_tnt.BPC1_colamp_a_m1 | 15 | CTCTCTCTCTCTCTC |
BBRBPC_tnt.BPC5_col_a_m1 | 30 | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG |
BBRBPC_tnt.BPC5_colamp_a_m1 | 29 | GAGAGAGAGAGAGAGAGAGAGAGAGAGAG |
BBRBPC_tnt.BPC6_col_a_m1 | 21 | CTCTCTCTCTCTCTCTCTCTC |
BES1_tnt.BAM8_col_a_m1 | 15 | TCACACGTGTGAACT |
BES1_tnt.BAM8_colamp_a_m1 | 15 | AGTTCACACGTGTGA |
BSD_tnt.AT1G10720_col_a_m1 | 14 | AGAAGCTTCTAGAA |
BZR_tnt.At1g78700_col_a_m1 | 11 | CGCACGTGTGG |
BZR_tnt.At1g78700_colamp_a_m1 | 15 | CCGCACGTGTGTATT |
BZR_tnt.At4g18890_col_a_m1 | 11 | CGCACGTGTGA |
BZR_tnt.At4g18890_colamp_a_m1 | 11 | CGCACGTGTGA |
BZR_tnt.At4g36780_col_a_m1 | 11 | TCACACGTGCG |
BZR_tnt.At4g36780_colamp_a_m1 | 14 | TCACACGTGTGCAT |
BZR_tnt.BZR1_col_a_m1 | 20 | CCACACGTGCGACTTTTTTT |
C2C2COlike_tnt.AT4G27900_col_a_m1 | 22 | AATCAACGGTTGAGATTTATTC |
C2C2COlike_tnt.AT5G59990_col_a_m1 | 21 | ATAAAATGGACGGTTGAGATT |
C2C2COlike_tnt.AT5G59990_colamp_a_m1 | 15 | AATCTCAACCGTTCA |
C2C2YABBY_tnt.CRC_col_a_m1 | 8 | TATGATTA |
C2C2YABBY_tnt.CRC_colamp_a_m1 | 30 | CAAGTCATATTCGACTCCAAAACACTAACC |
C2C2dof_tnt.AT1G47655_col_a_m1 | 11 | AGAAAAAGTAA |
C2C2dof_tnt.AT1G47655_colamp_a_m1 | 15 | TTTTTTTCTTTTTTT |
C2C2dof_tnt.AT1G69570_col_a_m1 | 27 | TTTTCACTTTTTCTTTTTTTTTTTTTT |
C2C2dof_tnt.AT1G69570_colamp_a_m1 | 21 | AAAAAAAAAAAAGAAAAAGTG |
C2C2dof_tnt.AT2G28810_col_a_m1 | 21 | TTTTTTTTTTTTTACTTTTTT |
C2C2dof_tnt.AT2G28810_colamp_a_m1 | 15 | TTTACTTTTTGTTTT |
C2C2dof_tnt.AT3G52440_col_a_m1 | 11 | CAAAAAGTTAA |
C2C2dof_tnt.AT3G52440_colamp_a_m1 | 21 | AATTTTACTTTTTGTTTTTTT |
C2C2dof_tnt.AT5G02460_col_a_m1 | 21 | AAAAAAGTAAAAAAAAAAAAA |
C2C2dof_tnt.AT5G02460_colamp_a_m1 | 19 | TTTTTACTTTTTTTTTTTT |
C2C2dof_tnt.AT5G66940_col_a_m1 | 29 | TTTTTTTTTTTTTTTACTTTTTTTTTTTT |
C2C2dof_tnt.AT5G66940_colamp_a_m1 | 21 | TTTTTTTACTTTTTCTTTTTT |
C2C2dof_tnt.Adof1_col_a_m1 | 21 | AAAAAGAAAAAGTAAAAAAAA |
C2C2dof_tnt.Adof1_colamp_a_m1 | 21 | AAAAAAGAAAAAGTAAAAAAA |
C2C2dof_tnt.At1g64620_100ng20cy_b_m1 | 19 | AAAAAAAAAAAAGTTAAAA |
C2C2dof_tnt.At1g64620_colamp_a_m1 | 11 | CAAAAAGTAAA |
C2C2dof_tnt.At3g45610_col_a_m1 | 19 | TTTACTTTTTGCTTTTTTT |
C2C2dof_tnt.At3g45610_colamp_a_m1 | 15 | TTTTTTTACTTTTTG |
C2C2dof_tnt.At4g38000_col_a_m1 | 28 | TTTTTTTTTTTTTTTTTTTTACTTTTTT |
C2C2dof_tnt.At4g38000_colamp_a_m1 | 11 | GAAAAAGTTAA |
C2C2dof_tnt.At5g62940_col_a_m1 | 21 | AAAAAAAAGAAAAAGTAAAAA |
C2C2dof_tnt.CDF3_col_a_m1 | 19 | AAAAAAGAAAAAGTGAAAA |
C2C2dof_tnt.CDF3_colamp_a_m1 | 18 | TTCACTTTTTCTTTTTTT |
C2C2dof_tnt.COG1_col_a_m1 | 21 | AAAAAAAAGAAAAAGTGAAAA |
C2C2dof_tnt.COG1_colamp_a_m1 | 15 | TTTTTTCACTTTTTT |
C2C2dof_tnt.DAG2_col_a_m1 | 11 | CAAAAAGTAAA |
C2C2dof_tnt.DAG2_colamp_a_m1 | 13 | CAAAAAGTTAAAT |
C2C2dof_tnt.OBP1_col_a_m1 | 21 | TTTTTTTTTTTTTTACTTTTT |
C2C2dof_tnt.OBP3_col_a_m1 | 21 | TTTACTTTTTTTTTTTTTTTT |
C2C2dof_tnt.OBP3_colamp_a_m1 | 19 | TTTTTTTTTTTACTTTTTT |
C2C2dof_tnt.OBP4_col_a_m1 | 14 | CAAAAAGTTAAAAA |
C2C2dof_tnt.OBP4_colamp_a_m1 | 19 | AAAAAACAAAAAGTAAAAA |
C2C2dof_tnt.dof24_col_a_m1 | 15 | TTTTTTTACTTTTTG |
C2C2dof_tnt.dof24_colamp_a_m1 | 15 | AAAAACAAAAAGTAA |
C2C2dof_tnt.dof42_col_a_m1 | 19 | AAAAAAAAAAGGCAAAAAA |
C2C2dof_tnt.dof43_col_a_m1 | 11 | AAAGCTACTTT |
C2C2dof_tnt.dof43_colamp_a_m1 | 14 | AAAAGCTACTTTTT |
C2C2dof_tnt.dof45_col_a_m1 | 14 | GAAAAAGTAACTTT |
C2C2dof_tnt.dof45_colamp_a_m1 | 15 | AAAAAAGTAGCTTTT |
C2C2gata_tnt.GATA11_col_a_m1 | 15 | AGATCTAGATCTGAA |
C2C2gata_tnt.GATA12_col_a_m1 | 13 | GATCCAGATCTAA |
C2C2gata_tnt.GATA12_colamp_a_m1 | 15 | TAGATCTGGATCTGA |
C2C2gata_tnt.GATA14_col_a_m1 | 15 | TTTAGATCTGATTTT |
C2C2gata_tnt.GATA15_col_b_m1 | 19 | CATCATCATCATCATCATC |
C2C2gata_tnt.GATA16_col_a_m1 | 27 | CATCATCATCATCATCATCATCATCAT |
C2C2gata_tnt.GATA19_col_a_m1 | 11 | CAGATCGGATT |
C2C2gata_tnt.GATA19_colamp_a_m1 | 11 | CGGATCGGATT |
C2C2gata_tnt.GATA1_col_a_m1 | 15 | ATGGTGATGATGATG |
C2C2gata_tnt.GATA1_colamp_a_m1 | 14 | GATTCAGATCTGAA |
C2C2gata_tnt.GATA20_col_a_m1 | 8 | ATCGGATC |
C2C2gata_tnt.GATA20_colamp_a_m1 | 13 | TCGATCGGATTAG |
C2C2gata_tnt.GATA4_col_a_m1 | 15 | TTTCAGATCTGAATC |
C2C2gata_tnt.GATA6_col200_a_m1 | 13 | TAGATCTAGATCT |
C2C2gata_tnt.ZIM_col_a_m1 | 15 | TCTCAACCGTTGGAT |
C2C2gata_tnt.ZML1_col_a_m1 | 15 | TCATCATCATCATCA |
C2C2gata_tnt.ZML1_colamp_a_m1 | 21 | ATAAATCTCAACCGTTGGATT |
C2C2gata_tnt.ZML2_col_a_m1 | 19 | CATCATCATCATCATCATC |
C2H2_tnt.AT2G15740_col_a_m1 | 11 | AACGATGACGA |
C2H2_tnt.AT3G46070_col_a_m1 | 15 | TCATTTTCACTCTCC |
C2H2_tnt.AT3G49930_col_a_m1 | 7 | GAAATCT |
C2H2_tnt.AT4G26030_col_a_m1 | 19 | CAATAATTTCACCAACCTT |
C2H2_tnt.AT5G22990_col_a_m1 | 15 | TCGTCATCGTTTTCG |
C2H2_tnt.AZF1_colamp_a_m1 | 11 | AGTGTGAGTGA |
C2H2_tnt.At1g14580_col_a_m1 | 20 | TTTTTTTTTGTCGTTTTGTG |
C2H2_tnt.At1g14580_colamp_a_m1 | 17 | CACAAAACGACAAAAAA |
C2H2_tnt.At2g41835_col_b_m1 | 7 | TTGAAAA |
C2H2_tnt.At2g48100_col_b_m1 | 6 | TCACCA |
C2H2_tnt.At3g60580_col_a_m1 | 8 | TGTAGTAG |
C2H2_tnt.At5g04390_col200_a_m1 | 11 | TAGTGAAGTTG |
C2H2_tnt.At5g22890_col_a_m1 | 18 | CAGATAACACCTGCACAA |
C2H2_tnt.At5g66730_col_m1 | 17 | AAGAAAACGACAAAAAA |
C2H2_tnt.At5g66730_colamp_a_m1 | 17 | TTTTTTGTCGTTTTCTG |
C2H2_tnt.AtIDD11_col_a_m1 | 21 | TTTTTTTTTTTGTCTTTTTCT |
C2H2_tnt.AtIDD11_colamp_a_m1 | 18 | TTTTTTTGTCGTTTTGTG |
C2H2_tnt.IDD2_col_a_m1 | 15 | CACAAAACGACAAAA |
C2H2_tnt.IDD2_colamp_a_m1 | 18 | TTTTTTTGTCGTTTTCTT |
C2H2_tnt.IDD4_col_a_m1 | 17 | CACAAAACGACAAAAAA |
C2H2_tnt.IDD5_col_m1 | 16 | TTTTTGTCGTTTTGTG |
C2H2_tnt.IDD5_colamp_a_m1 | 17 | TTTTTTGTCGTTTTGTG |
C2H2_tnt.IDD7_col_a_m1 | 18 | CACAAAACGACAAAAAAA |
C2H2_tnt.JGL_col_a_m1 | 11 | ACTTTCAGTTA |
C2H2_tnt.JKD_col_a_m1 | 20 | TTTTTTTTTGTCGTTTTCTG |
C2H2_tnt.MGP_col_a_m1 | 20 | CAGAAAACGACAAAAAAAAA |
C2H2_tnt.MGP_colamp_a_m1 | 18 | TTTTTTTGTCGTTTTCTG |
C2H2_tnt.NUC_col_a_m1 | 20 | TTTTTTTTTGTCGTTTTGTG |
C2H2_tnt.NUC_colamp_a_m1 | 17 | TTTTTTGTCGTTTTGTG |
C2H2_tnt.SGR5_col_a_m1 | 15 | AAAAAAAGACAAAAA |
C2H2_tnt.SGR5_colamp_a_m1 | 15 | TTTTGTCTTTTTTTT |
C2H2_tnt.STOP1_col_a_m1 | 19 | CCTTCCCCAGATAAAACCT |
C2H2_tnt.STOP1_colamp_a_m1 | 15 | ACCTTCCCCAGATAA |
C2H2_tnt.STZ_col_m1 | 11 | CACTTTCACTA |
C2H2_tnt.STZ_colamp_a_m1 | 8 | ACTTCACT |
C2H2_tnt.TF3A_col_a_m1 | 19 | CCTCCTCCTCCTCCTCCTC |
C2H2_tnt.WIP5_col_a_m1 | 15 | TACCTGGAGAACATA |
C2H2_tnt.WIP5_colamp_a_m1 | 15 | TACCTGGAGAACATA |
C3H_tnt.AT3G12130_colamp_a_m1 | 14 | AAACAAAAAGTTAA |
C3H_tnt.AT5G63260_col_a_m1 | 11 | GAAAAAGTTAA |
C3H_tnt.AT5G63260_colamp_a_m1 | 11 | CAAAAAGTAAA |
C3H_tnt.At1g70910_col_a_m1 | 7 | ATCACCA |
C3H_tnt.At1g74370_col_a_m1 | 20 | GATAGTGTTAAGGATAAGAT |
C3H_tnt.At5g08750_col_a_m1 | 15 | ACCTCAGCCGCAAAA |
C3H_tnt.CDM1_colamp_a_m1 | 15 | CCGAAAAAATCGGAA |
C3H_tnt.EMB1789_col_a_m1 | 15 | TTTTTTTTTTACCGT |
C3H_tnt.TZF9_col_a_m1 | 6 | TCAACA |
C3H_tnt.U2AF35B_col_a_m1 | 7 | TTGTTGA |
CAMTA_tnt.CAMTA1_col_a_m1 | 12 | AAAGCGCGTGAA |
CAMTA_tnt.CAMTA5_col_a_m1 | 18 | CCGTGTAAAAAACGCGTT |
CCAATHAP3_tnt.HAP3_col_a_m1 | 9 | TCCATCATC |
CCAATHAP3_tnt.NFYB4_col_a_m1 | 7 | TGAAAAC |
CPP_tnt.AT2G20110_col_a_m1 | 15 | TTTTAAATTTTTTAA |
CPP_tnt.AT2G20110_colamp_a_m1 | 15 | AATTTGAATTTTAAA |
CPP_tnt.SOL1_col_m1 | 15 | TTTTAAAATTTAAAT |
CPP_tnt.SOL1_colamp_a_m1 | 15 | AATTTAAATTTTAAA |
CPP_tnt.TCX2_col_a_m1 | 15 | ATTTAAAATTCAAAT |
CPP_tnt.TCX2_colamp_a_m1 | 14 | TTTAAAATTTAAAT |
CPP_tnt.TSO1_col_a_m1 | 15 | ATTTTAAAATTTAAA |
DBP_tnt.AT3G51470_col_a_m1 | 15 | TACGGTGCACCACCA |
E2FDP_tnt.DEL1_col_a_m1 | 21 | AAAAAAATTTTCCCGCCAAAA |
E2FDP_tnt.DEL1_colamp_a_m1 | 15 | TTTTTGGCGGGAAAA |
E2FDP_tnt.DEL2_col_a_m1 | 20 | TTATTTTTTTGGCGGGAAAA |
E2FDP_tnt.DEL2_colamp_a_m1 | 15 | TTTTTGGCGGGAAAA |
E2FDP_tnt.E2FA_col_a_m1 | 14 | ATTTGGCGCCAAAA |
E2FDP_tnt.E2FA_colamp_a_m1 | 14 | TTTTGGCGCCATTT |
E2FDP_tnt.E2FC_col_a_m1 | 15 | ATTTTGGCGCCAAAA |
EIL_tnt.EIL3_col_b_m1 | 21 | GTGTCTAGGTTCATTGTATCT |
EIL_tnt.EIN3_col_a_m1 | 15 | GTCTAGATTCAATGA |
EIL_tnt.EIN3_colamp_a_d1 | 7 | ACCGTTA |
FAR1_tnt.FAR1_col_a_m1 | 15 | ACCTCACGCGCCTCC |
FAR1_tnt.FAR1_colamp_a_m1 | 21 | AGGCGCGTGAAATTCACGCGC |
FHA_tnt.FHA2_col_b_m1 | 21 | TAACGTGTTCTACACGCTACC |
G2like_tnt.AT1G49560_col_a_m1 | 11 | ATCAAAGATTC |
G2like_tnt.AT1G49560_colamp_a_m1 | 15 | AGAATCAAAGATTCT |
G2like_tnt.AT2G20400_col_a_m1 | 29 | CGAATATTCCTTTATTTCATCTGTATAAT |
G2like_tnt.AT2G20400_colamp_a_m1 | 15 | AAAGAATATTCCAAT |
G2like_tnt.AT2G38300_col_a_m1 | 11 | AAAAGAATGTT |
G2like_tnt.AT2G40260_col_a_m1 | 15 | TTAAAATATTCTTTT |
G2like_tnt.AT2G40260_colamp_a_m1 | 20 | AAAAATTAAAAACATTCTTT |
G2like_tnt.AT4G37180_col_a_m1 | 11 | AAAAAGATTCC |
G2like_tnt.AT4G37180_colamp_a_m1 | 11 | AAAAAGATTCC |
G2like_tnt.AT5G45580_col_a_m1 | 14 | AAAAGAATATTCTT |
G2like_tnt.AT5G45580_colamp_a_m1 | 14 | AAAAGGAATCTTCT |
G2like_tnt.At1g13300_col_a_m1 | 15 | AGAATCGAAGATTCT |
G2like_tnt.At1g25550_col_m1 | 11 | GGAATCTTCTA |
G2like_tnt.At1g25550_colamp_a_m1 | 14 | GAATAGAAGATTCC |
G2like_tnt.At1g68670_col_m1 | 13 | GAATCAAAGATTC |
G2like_tnt.At1g68670_colamp_a_d1 | 7 | AGATTCT |
G2like_tnt.At2g01060_col_m1 | 13 | AAAAGAATATTCC |
G2like_tnt.At2g01060_colamp_a_m1 | 15 | AAAAAAGAATATTCT |
G2like_tnt.At2g03500_col_a_m1 | 11 | AGAATATTCCA |
G2like_tnt.At2g03500_colamp_a_m1 | 14 | GAATCTTGGATTCC |
G2like_tnt.At3g04030_col_a_m1 | 14 | AAAAGAATCTTCTT |
G2like_tnt.At3g04030_colamp_a_m1 | 15 | AGAATATTCCTTTTT |
G2like_tnt.At3g12730_col_a_m1 | 14 | AAAGGGAATATTCC |
G2like_tnt.At3g12730_colamp_a_m1 | 14 | AAAGGAATATTCTT |
G2like_tnt.At3g13040_col_b_m1 | 9 | AAGAAAACA |
G2like_tnt.At3g24120_col_a_m1 | 8 | AGAATCTG |
G2like_tnt.At3g24120_colamp_a_m1 | 14 | AAGAATATTCCTTT |
G2like_tnt.At5g29000_col_a_m1 | 15 | AAAGAATATTCCAAT |
G2like_tnt.KAN2_col_a_m1 | 15 | ATTAGAATATTCTTT |
G2like_tnt.KAN2_colamp_a_m1 | 11 | AAAGAATATTC |
GRF_tnt.AtGRF6_col_a_m1 | 14 | GAAAATGTGTCAGA |
GRF_tnt.GRF9_col_a_m1 | 15 | TTGTCAGAAAATACA |
GRF_tnt.GRF9_colamp_a_m1 | 8 | TGTCAGAA |
GeBP_tnt.AT1G66420_col_a_m1 | 19 | AACCTTATCCATATCTTAT |
GeBP_tnt.AT4G00250_col_a_m1 | 13 | AACCTTATCCATT |
HB_tnt.ANL2_col_a_m1 | 11 | GCATTAATTAC |
HB_tnt.ANL2_colamp_a_m1 | 11 | GCATTAATTGC |
HB_tnt.ATHB15_col_a_m1 | 15 | AAAAGTAATGATTAC |
HB_tnt.ATHB21_col_a_m1 | 14 | ACACCAATAATTGG |
HB_tnt.ATHB21_colamp_a_m1 | 20 | ACACCAATAATTGAATATTA |
HB_tnt.ATHB40_col_a_m1 | 21 | AAACCAATAATTGAAAATTAT |
HB_tnt.ATHB40_colamp_a_m1 | 14 | ACACCAATAATTGG |
HB_tnt.ATHB53_col_a_m1 | 11 | CCAATAATTGA |
HB_tnt.ATHB53_colamp_a_m1 | 15 | TCCAATTATTGGTGC |
HB_tnt.ATHB5_col_a_m1 | 11 | TCAATAATTGA |
HB_tnt.ATHB5_colamp_a_m1 | 10 | CAATGATTGA |
HB_tnt.HDG7_col_a_m1 | 11 | GTAATTAATGC |
HB_tnt.LMI1_col_a_m1 | 13 | TTCAATTATTGGT |
HB_tnt.LMI1_colamp_a_m1 | 13 | TCAATTATTGGTT |
HB_tnt.PHV_col_a_m1 | 15 | GTAATCATTACTTTT |
HB_tnt.WOX11_col_a_m1 | 11 | AGTTAATTAAT |
HMG_tnt.3XHMGBOX1_col_a_m1 | 21 | ACGGCGGAGGAGGCGGCGGAG |
HMG_tnt.3XHMGBOX1_colamp_a_m1 | 15 | ACCACCACCACCACC |
HSF_tnt.HSF21_col_a_m1 | 19 | TCTAGAAGCTTCTAGAAGC |
HSF_tnt.HSF3_col_a_m1 | 12 | GAAGCTTCTAGA |
HSF_tnt.HSF3_colamp_a_d1 | 6 | CTAGAA |
HSF_tnt.HSF6_col_a_m1 | 12 | GAAGCTTCTAGA |
HSF_tnt.HSF7_col_a_m1 | 14 | TTCTAGAAGCTTCT |
HSF_tnt.HSF7_colamp_a_m1 | 14 | AGAAGCTTCTAGAA |
HSF_tnt.HSFA1E_col_a_m1 | 13 | AGAAGCTTCTAGA |
HSF_tnt.HSFA1E_colamp_a_m1 | 15 | AGAAGCTTCTAGAAG |
HSF_tnt.HSFA6A_col_a_m1 | 16 | GAAGATTCTAGAAGCT |
HSF_tnt.HSFA6A_colamp_a_m1 | 13 | TTCTAGAAGCTTC |
HSF_tnt.HSFA6B_col_m1 | 15 | AGAAGCTTCTAGAAG |
HSF_tnt.HSFA6B_colamp_a_m1 | 13 | AGAAGCTTCTAGA |
HSF_tnt.HSFB3_col_a_m1 | 15 | CTTCTAGAAGCTTCT |
HSF_tnt.HSFB3_colamp_a_m1 | 13 | AAGCTTCTAGAAG |
HSF_tnt.HSFB4_col_a_m1 | 15 | AGAAGCTTCTAGAAG |
HSF_tnt.HSFC1_col_a_m1 | 11 | CTAGAAGCTTC |
HSF_tnt.HSFC1_colamp_a_m1 | 17 | AGCTTCTAGAAGCTTCT |
Homeobox_ecoli.HAT2_col_v31_m1 | 11 | ATTAATCATTA |
Homeobox_tnt.ATHB13_col_a_m1 | 11 | TCAATAATTAA |
Homeobox_tnt.ATHB13_colamp_a_m1 | 11 | TCAATAATTGA |
Homeobox_tnt.ATHB18_col_a_m1 | 11 | TCAATCATTGG |
Homeobox_tnt.ATHB18_colamp_a_m1 | 11 | CCAATGATTGG |
Homeobox_tnt.ATHB20_col_a_m1 | 11 | TCAATAATTGA |
Homeobox_tnt.ATHB20_colamp_a_m1 | 11 | TCAATTATTGA |
Homeobox_tnt.ATHB6_col_a_m1 | 11 | CAATCATTTAT |
Homeobox_tnt.ATHB6_colamp_a_m1 | 11 | TCAATAATTGA |
Homeobox_tnt.ATHB7_col_a_m1 | 13 | TCAATGATTGATT |
Homeobox_tnt.EDT1_col_m1 | 11 | GCATTAAATGC |
Homeobox_tnt.HAT1_col_a_m1 | 15 | CTAATGATTGGTAAT |
Homeobox_tnt.HAT1_colamp_a_m1 | 11 | CCAATGATTAA |
Homeobox_tnt.HAT22_col_a_m1 | 10 | ACTAATCATT |
Homeobox_tnt.HAT2_colamp_a_m1 | 11 | TTAATCATTTA |
Homeobox_tnt.HAT5_col_a_m1 | 11 | TCAATAATTGA |
Homeobox_tnt.HAT5_colamp_a_m1 | 14 | ATCAATAATTGAAT |
Homeobox_tnt.HDG1_col100_a_m1 | 11 | GTAATTAATGC |
Homeobox_tnt.HDG1_colamp_a_m1 | 11 | GTAATTAATGC |
Homeobox_tnt.PDF2_col_m1 | 15 | AAAAGAATATTCCAA |
Homeobox_tnt.WUS1_col_a_m1 | 11 | TCATTCATTCA |
Homeobox_tnt.WUS1_colamp_a_m1 | 11 | TGAATGATTGA |
LIM_tnt.WLIM2A_col_a_m1 | 7 | TCAAATC |
LOBAS2_tnt.AS2_col_a_m1 | 21 | TCTCCGCCGCCTTCTCCGCCG |
LOBAS2_tnt.ASL18_col_a_m1 | 15 | CCGGAAAATCCGGAG |
LOBAS2_tnt.ASL18_colamp_a_m1 | 16 | CCGGATTTTCCGGCGA |
LOBAS2_tnt.LBD13_col_a_m1 | 17 | CGGCGGAAATTGCGGCG |
LOBAS2_tnt.LBD13_colamp_a_m1 | 15 | CGGCGGAAATTGCGG |
LOBAS2_tnt.LBD18_col_a_m1 | 19 | TTTCCTCCGGATTTTCCGG |
LOBAS2_tnt.LBD18_colamp_a_m1 | 15 | CGGATTTTCCGGAGA |
LOBAS2_tnt.LBD19_col_a_m1 | 15 | CCGGAAAATCCGGAG |
LOBAS2_tnt.LBD19_colamp_a_d1 | 7 | CCGGAAA |
LOBAS2_tnt.LBD23_col_a_m1 | 15 | AGCGTATTTTACGCT |
LOBAS2_tnt.LBD23_colamp_a_m1 | 15 | AGCGTAAAATACGCT |
LOBAS2_tnt.LBD2_col_a_m1 | 15 | CCGAAAAAATCGGAG |
LOBAS2_tnt.LBD2_colamp_a_m1 | 15 | CCGAAAAAATCGGAG |
LOBAS2_tnt.LOB_col_a_m1 | 21 | TCCGCCGCCGCCTCCGCCGCC |
MADS_tnt.AGL13_col_b_m1 | 18 | TTACCAAAAATGGAAAAT |
MADS_tnt.AGL15_col_a_m1 | 19 | CTTTCCTTTTTTGGAAAGT |
MADS_tnt.AGL15_colamp_a_m1 | 21 | AACTTTCCTTTTTTGGAAAGT |
MADS_tnt.AGL16_col_a_m1 | 15 | TTTCCTTTTTTGGAA |
MADS_tnt.AGL16_colamp_a_m1 | 21 | CTTTCCTTTTTTGGAAAGTTT |
MADS_tnt.AGL25_col_a_m1 | 18 | ACTTTCCATTTTTGGAAA |
MADS_tnt.AGL25_colamp_a_m1 | 15 | CTTTCCATTTTTGGA |
MADS_tnt.AGL42_col_a_m1 | 7 | CATCATC |
MADS_tnt.AGL55_col_a_m1 | 6 | TCACCA |
MADS_tnt.AGL63_col_a_m1 | 15 | TTCCAAAAATGGAAA |
MADS_tnt.AGL6_col_a_m1 | 19 | TTTCCAAAAAAGGAAAAAA |
MADS_tnt.FEM111_col_a_m1 | 6 | TGGTGA |
MADS_tnt.SVP_col_v3b_m1 | 15 | ACTTTCCTTTTTTGG |
MADS_tnt.SVP_colamp_v3b_m1 | 15 | TTCCCAAAAAGGAAA |
MYB_tnt.ATY13_col_a_m1 | 15 | CAACTACCAACTACC |
MYB_tnt.ATY13_colamp_a_m1 | 15 | CAACTACCAACCACC |
MYB_tnt.ATY19_col_a_m1 | 21 | CTCCAAAATCTCCACCAACCA |
MYB_tnt.BOS1_col_a_m1 | 15 | TTGGTAAAGTTAGGT |
MYB_tnt.MS188_col_a_m1 | 15 | AAAAATTAGGTGAAA |
MYB_tnt.MS188_colamp_a_m1 | 15 | AAAAAATTAGGTGAA |
MYB_tnt.MYB101_col_a_m1 | 15 | AACCGTAACCGAATT |
MYB_tnt.MYB101_colamp_a_m1 | 15 | AACTGTAACCGAATT |
MYB_tnt.MYB105_col_a_m1 | 13 | TTAATTACCGTTA |
MYB_tnt.MYB105_colamp_a_m1 | 17 | AGTTAAATAACGGTATT |
MYB_tnt.MYB107_col_a_m1 | 18 | AAGGTAGGTGAACTAATT |
MYB_tnt.MYB107_colamp_a_m1 | 14 | TAGTTCACCTACCT |
MYB_tnt.MYB10_col_a_m1 | 16 | TATTGTGGTAGGTGAA |
MYB_tnt.MYB10_colamp_a_m1 | 14 | TTCCACCTACCATT |
MYB_tnt.MYB113_col_a_m1 | 11 | AAGTCAGTTAT |
MYB_tnt.MYB116_col_a_m1 | 15 | AAAAAAAGTTAGGCA |
MYB_tnt.MYB116_colamp_a_m1 | 13 | AAAGTTAGGCAGA |
MYB_tnt.MYB118_col_a_m1 | 17 | AAAATAACCGTTACAAA |
MYB_tnt.MYB118_colamp_a_m1 | 15 | AAATTGTAACGGTTA |
MYB_tnt.MYB119_col_a_m1 | 11 | TAACCGTTACA |
MYB_tnt.MYB119_colamp_a_m1 | 15 | AAATTGTAACGGTTA |
MYB_tnt.MYB121_col_a_m1 | 14 | AAAGTTAGGTATAA |
MYB_tnt.MYB13_col_a_m1 | 15 | GTAGTGGTTGGTGAA |
MYB_tnt.MYB13_colamp_a_m1 | 18 | TCCACCAACCACAATCAT |
MYB_tnt.MYB17_colamp_a_m1 | 15 | AAGTTGGTAGGTGAG |
MYB_tnt.MYB1_col_a_m1 | 19 | ATTACCGTTAAAGTTGTTA |
MYB_tnt.MYB23_col_a_m1 | 11 | AAGTTTGTTGG |
MYB_tnt.MYB27_col_a_m1 | 15 | AAAAAATTAGGTAAA |
MYB_tnt.MYB27_colamp_a_m1 | 16 | TTTTACCTAATTTTTT |
MYB_tnt.MYB30_col_a_m1 | 15 | TTCCCAACCACCAAC |
MYB_tnt.MYB30_colamp_a_m1 | 15 | CAACTCCCAACTACC |
MYB_tnt.MYB33_col_a_m1 | 11 | ATAACCGAATT |
MYB_tnt.MYB39_col_a_m1 | 14 | AAAATTAGGTGAAA |
MYB_tnt.MYB39_colamp_a_m1 | 21 | TTTATTAAAAGTTAGGTGAAA |
MYB_tnt.MYB3R1_col_a_m1 | 15 | AAATATGACCGTTAG |
MYB_tnt.MYB3R1_colamp_a_m1 | 13 | AATATAACCGTTA |
MYB_tnt.MYB3R4_col_a_m1 | 15 | AAATATAACCGTTGG |
MYB_tnt.MYB3R5_col_a_m1 | 15 | AAAATATGACCGTTG |
MYB_tnt.MYB40_col_a_m1 | 13 | TTTACCTACCTTT |
MYB_tnt.MYB41_col_a_m1 | 15 | TTTGTTCACCTAACT |
MYB_tnt.MYB43_col_a_m1 | 13 | AAGGTAGGTGAAA |
MYB_tnt.MYB44_col_m1 | 19 | TTTACGGTTATTTCCGTTA |
MYB_tnt.MYB44_colamp_a_m1 | 11 | AATAACCGTAA |
MYB_tnt.MYB49_col_a_m1 | 15 | TTGTTCACCTACCTT |
MYB_tnt.MYB49_colamp_a_m1 | 14 | AAAGTTAGGTGAAA |
MYB_tnt.MYB4_col200_a_m1 | 15 | AATAAGTTTGGTAAA |
MYB_tnt.MYB51_col_a_m1 | 21 | TTTCAAAATTTTCACCTACCT |
MYB_tnt.MYB52_col_a_m1 | 11 | CTTTACCGTTA |
MYB_tnt.MYB55_col_m1 | 14 | CCTCAACCACCACC |
MYB_tnt.MYB55_colamp_a_m1 | 15 | TGGTTGGTGGAGTTA |
MYB_tnt.MYB56_col_a_m1 | 15 | ATAAATAACGGTATT |
MYB_tnt.MYB56_colamp_a_m1 | 15 | TAAATAACGGTATTT |
MYB_tnt.MYB57_col_a_m1 | 14 | TTTACCTAACTTTT |
MYB_tnt.MYB57_colamp_a_d1 | 7 | ACCTAAC |
MYB_tnt.MYB58_col_a_m1 | 15 | TGTGGTTGGTGAAAC |
MYB_tnt.MYB58_colamp_a_m1 | 21 | ATTGTTGTGGTTGGTGAAACA |
MYB_tnt.MYB60_col_m1 | 19 | CTTTTCCAACCACCTTTTT |
MYB_tnt.MYB61_col_a_m1 | 15 | TCCACCTACCACCAC |
MYB_tnt.MYB61_colamp_a_m1 | 13 | CTCCACCTACCAT |
MYB_tnt.MYB62_col_a_m1 | 15 | AAAAAAGTTAGGTAG |
MYB_tnt.MYB62_colamp_a_m1 | 13 | TCTACCTAACTTT |
MYB_tnt.MYB63_col_a_m1 | 21 | CAACTACTCCACCAACCCCCA |
MYB_tnt.MYB65_col200_a_m1 | 13 | ACCGTAACCGTAA |
MYB_tnt.MYB65_colamp_a_m1 | 15 | ATAACCGTAACTATA |
MYB_tnt.MYB67_col_a_m1 | 21 | GTAGTGGTAATGTTAGGTGGA |
MYB_tnt.MYB70_col_a_m1 | 14 | TAACCGTAATAACC |
MYB_tnt.MYB73_col_a_m1 | 11 | TAACCGTAATA |
MYB_tnt.MYB74_col_m1 | 14 | TTTTACCTAACTAT |
MYB_tnt.MYB74_colamp_a_m1 | 14 | AAAGGTAGGTGAAA |
MYB_tnt.MYB77_col_a_m1 | 15 | CGGTTATGACGGTTA |
MYB_tnt.MYB77_colamp_a_m1 | 20 | CGTTTGATACGGTTACGGTT |
MYB_tnt.MYB81_col_a_m1 | 11 | GTAACCGAATT |
MYB_tnt.MYB81_colamp_a_m1 | 14 | ACTGTAACCGTTTT |
MYB_tnt.MYB83_col_a_m1 | 11 | GTGGTTGGTGG |
MYB_tnt.MYB83_colamp_a_m1 | 15 | TGTAGTGGTTGGTGG |
MYB_tnt.MYB88_col_a_m1 | 15 | ACCACACGCGCCTCC |
MYB_tnt.MYB88_colamp_a_m1 | 13 | GGAGGAGCGTGTG |
MYB_tnt.MYB92_100ng20cy_b_m1 | 10 | GTTAGGTAAA |
MYB_tnt.MYB92_colamp_a_m1 | 19 | AAATAAGTTCACCTACCAT |
MYB_tnt.MYB93_col_a_m1 | 21 | TTGTTTAAGGTAGGTGAACAA |
MYB_tnt.MYB93_colamp_a_m1 | 15 | ATTAGTTCACCTACC |
MYB_tnt.MYB94_col_b_m1 | 19 | TAGAAGGTAGTTGGGAAAT |
MYB_tnt.MYB96_col_b_m1 | 18 | TAAGGTAGTTGGTAGTTG |
MYB_tnt.MYB96_colamp_a_m1 | 21 | TACACCTACCAACCACCTTCT |
MYB_tnt.MYB98_col_a_m1 | 15 | AAAATGTAACGGATA |
MYB_tnt.MYB99_col_a_m1 | 13 | TCTCACCTACCTC |
MYB_tnt.MYB99_colamp_a_m1 | 11 | TTCACCTACCT |
MYBrelated_tnt.AT1G18960_col_a_m1 | 22 | CAACATCATCAACAACATCACC |
MYBrelated_tnt.AT1G72740_col_a_m1 | 15 | CCTAAACCCTAAATC |
MYBrelated_tnt.AT1G72740_colamp_a_m1 | 21 | AGTTTTAGATTTAGGGTTTTG |
MYBrelated_tnt.AT3G10113_col_a_m1 | 15 | TAAAAAAATATCTTA |
MYBrelated_tnt.AT3G10580_col_a_m1 | 15 | AATTAGGATAAGGTT |
MYBrelated_tnt.AT3G10580_colamp_a_m1 | 15 | CCGAAAAAATCGGAA |
MYBrelated_tnt.AT4G12670_col_a_m1 | 29 | CTAAACCCTAAACCCTAAACCCTAAACCC |
MYBrelated_tnt.AT4G12670_colamp_a_m1 | 21 | CCTAAACCCTAAACCCTAAAC |
MYBrelated_tnt.AT5G56840_col_a_m1 | 15 | AACCTTATCCATAAA |
MYBrelated_tnt.AT5G56840_colamp_a_m1 | 16 | TATAACCTTATCCATA |
MYBrelated_tnt.AT5G61620_col_a_m1 | 15 | AATTTGGATAAGATT |
MYBrelated_tnt.AT5G61620_colamp_a_m1 | 11 | TCTTATCCAAA |
MYBrelated_tnt.At1g19000_col_a_m1 | 14 | AAATGGATAAGGTT |
MYBrelated_tnt.At1g19000_colamp_a_m1 | 14 | AACCTTATCCATTT |
MYBrelated_tnt.At1g49010_col_a_m1 | 15 | ATTAACCTTATCCTC |
MYBrelated_tnt.At1g49010_colamp_a_m1 | 15 | AATGTGGATAAGGTT |
MYBrelated_tnt.At1g74840_col100_a_m1 | 11 | AATGGATAAGG |
MYBrelated_tnt.At1g74840_colamp_a_m1 | 14 | AACCTTATCCATTT |
MYBrelated_tnt.At2g38090_col_a_m1 | 21 | AAAAAATTGGATAAGGATAAG |
MYBrelated_tnt.At3g09600_col_a_m1 | 12 | AGATATTTTTTT |
MYBrelated_tnt.At3g09600_colamp_a_m1 | 11 | AGATATTTTTT |
MYBrelated_tnt.At3g11280_col_a_m1 | 14 | ATCCTTATCTTCAT |
MYBrelated_tnt.At3g11280_colamp_a_m1 | 18 | TATAATCTTATCTTTATA |
MYBrelated_tnt.At4g01280_col_a_m1 | 11 | AGATATTTTTT |
MYBrelated_tnt.At4g01280_colamp_a_m1 | 11 | AGATATTTTTT |
MYBrelated_tnt.At5g05790_col_a_m1 | 15 | AACCTTATCTTCATC |
MYBrelated_tnt.At5g08520_col_b_m1 | 13 | AATATGGATAAGG |
MYBrelated_tnt.At5g08520_colamp_a_m1 | 11 | CCTTATCCTTA |
MYBrelated_tnt.At5g47390_col_b_m1 | 15 | ATAACCTTATCCATA |
MYBrelated_tnt.At5g47390_colamp_a_m1 | 14 | ATTTGGATAAGGTT |
MYBrelated_tnt.At5g52660_col_a_m1 | 11 | AGATATTTTTT |
MYBrelated_tnt.At5g52660_colamp_a_m1 | 12 | AGATATTTTTTT |
MYBrelated_tnt.At5g58900_col_a_m1 | 15 | TATGGATAAGGTTAT |
MYBrelated_tnt.At5g58900_colamp_a_m1 | 15 | AATCTTATCTTCATA |
MYBrelated_tnt.EPR1_col_m1 | 12 | AAAAATATCTTA |
MYBrelated_tnt.EPR1_colamp_a_m1 | 11 | AAAAAATATCT |
MYBrelated_tnt.LCL1_col_m1 | 10 | AGATATTTTT |
MYBrelated_tnt.LCL1_colamp_a_m1 | 11 | AGATATTTTTT |
MYBrelated_tnt.LHY1_col_a_m1 | 10 | AGATATTTTT |
MYBrelated_tnt.LHY1_colamp_a_m1 | 11 | AGATATTTTTA |
MYBrelated_tnt.RVE1_col_a_m1 | 14 | AAAAAAATATCTTA |
MYBrelated_tnt.RVE1_colamp_a_m1 | 10 | AGATATTTTT |
MYBrelated_tnt.TBP3_col_a_m1 | 19 | AAAATTAAACCCTAATTTT |
MYBrelated_tnt.TBP3_colamp_a_m1 | 19 | GAATTAGGGTTTAGGTTTT |
MYBrelated_tnt.TRP1_col_m1 | 23 | AAACCCTAAACCCTAAACCCTAA |
MYBrelated_tnt.TRP2_col_a_m1 | 20 | AAACCCTAAACCCTAAACCC |
MYBrelated_tnt.TRP2_colamp_a_m1 | 21 | AAACCCTAAACCCTAAACCCT |
NAC_tnt.ANAC004_col_a_m1 | 14 | CTTCTTCTACAAGT |
NAC_tnt.ANAC004_colamp_a_m1 | 21 | AACTTGTTCAACAAGTTTCCT |
NAC_tnt.ANAC005_col_a_m1 | 19 | TTACTTCTTTTACAAGTTT |
NAC_tnt.ANAC011_col_a_m1 | 21 | GTTACTTGTAGCAGAAGCAAC |
NAC_tnt.ANAC013_col_a_m1 | 16 | CTTGGGGAACAAGTAA |
NAC_tnt.ANAC013_colamp_a_m1 | 17 | ATTACTTGGAGAACAAG |
NAC_tnt.ANAC016_col_a_m1 | 15 | CTTGCAGAACAAGCA |
NAC_tnt.ANAC016_colamp_a_m1 | 15 | CTTGGAGAACAAGTA |
NAC_tnt.ANAC017_col_m1 | 19 | AGGTTTCTTGTTGAACAAG |
NAC_tnt.ANAC017_colamp_v31_m1 | 17 | TTACTTGGAGAACAAGG |
NAC_tnt.ANAC020_col_v31_m1 | 21 | TTGCTTGTTCTACACGTTACC |
NAC_tnt.ANAC028_col_a_m1 | 16 | CTTGTTCTACAAGTAA |
NAC_tnt.ANAC034_col_m1 | 19 | CCTGTTTTACACGGCATCT |
NAC_tnt.ANAC038_col_a_m1 | 18 | TTACGTGTGGAACAAGTA |
NAC_tnt.ANAC038_colamp_a_m1 | 21 | GGTAACTTGTAATACAAGAAA |
NAC_tnt.ANAC042_col_a_m1 | 20 | TGCCGTGATATCTACGCTAC |
NAC_tnt.ANAC045_col_a_m1 | 16 | CTTGTAGAACAAGCAA |
NAC_tnt.ANAC045_colamp_a_m1 | 16 | CTTGTAGAACAAGCAA |
NAC_tnt.ANAC046_col_m1 | 21 | TAACGTGTAGAACAAGTAACC |
NAC_tnt.ANAC046_colamp_a_m1 | 17 | CTTGTTCCACACGTTAC |
NAC_tnt.ANAC047_col_m1 | 15 | AAGTTACGTGTAAAA |
NAC_tnt.ANAC047_colamp_a_d1 | 5 | CACGT |
NAC_tnt.ANAC050_col_v3a_m1 | 16 | CTTGTGTCACAAGTAA |
NAC_tnt.ANAC050_colamp_a_m1 | 15 | TACTTGTGTAACAAG |
NAC_tnt.ANAC053_col_m1 | 17 | TTTCTTGTGGAACAAGT |
NAC_tnt.ANAC053_colamp_a_m1 | 16 | CTTGTTCCACAAGAAA |
NAC_tnt.ANAC055_col_m1 | 21 | TTTCAAATTTTACACGTAACT |
NAC_tnt.ANAC057_col_a_m1 | 17 | TACGTGTGGAACAAGCA |
NAC_tnt.ANAC057_colamp_a_m1 | 21 | AGGTTGCTTGTAGCACAAGTA |
NAC_tnt.ANAC058_col_a_m1 | 16 | CTTGTGCAACACGTAA |
NAC_tnt.ANAC058_colamp_a_m1 | 18 | TTCTTGTTTTACAAGTAA |
NAC_tnt.ANAC062_col_m1 | 15 | CTTAGTGATTAAGTA |
NAC_tnt.ANAC062_colamp_a_m1 | 18 | CTTAATCAGTAAGTAATC |
NAC_tnt.ANAC070_col_m1 | 21 | GGTAACGTAAAATACAAGCAA |
NAC_tnt.ANAC070_colamp_a_m1 | 16 | CTTGAATTTCACGCAA |
NAC_tnt.ANAC071_col_a_m1 | 15 | TACTTGAAGATGAAG |
NAC_tnt.ANAC071_colamp_a_m1 | 15 | CTTCATCTTCAAGTA |
NAC_tnt.ANAC075_col_a_m1 | 15 | AGCGTGAAGAAGAAG |
NAC_tnt.ANAC079_col_m1 | 21 | GTTACGTGTAGAACAAGTAAC |
NAC_tnt.ANAC079_colamp_a_m1 | 16 | CTTGTTTAACACGCAA |
NAC_tnt.ANAC083_col_v3a_m1 | 19 | TTACGTGTTTTACACGTAA |
NAC_tnt.ANAC083_colamp_a_m1 | 15 | CGTGTAAAACACGCA |
NAC_tnt.ANAC087_col_v3a_m1 | 19 | TAACGTGTAGAACAAGTAA |
NAC_tnt.ANAC087_colamp_a_m1 | 21 | GGTAACGTGTGGAACAAGGAA |
NAC_tnt.ANAC092_col_v3a_m1 | 15 | CGTGTAAAACAAGCA |
NAC_tnt.ANAC092_colamp_a_m1 | 20 | TTACTTGTTCTACACGTAAC |
NAC_tnt.ANAC094_col_a_m1 | 18 | TGCCGTGATCTTCACGTT |
NAC_tnt.ANAC096_col_m1 | 16 | CTTGAAGATGAAGCAA |
NAC_tnt.ANAC096_colamp_a_m1 | 18 | CTTGAACTTCAAGTAACC |
NAC_tnt.ANAC103_col_a_m1 | 21 | GGTAACTTGCTGAACAAGTTA |
NAC_tnt.ANAC103_colamp_a_m1 | 16 | TTGTTCAACAAGTTAC |
NAC_tnt.AT1G19040_col_a_m1 | 16 | TAACTTGGGGAGCAAG |
NAC_tnt.AT3G12910_col_a_m1 | 17 | TGCCGTGAATTCGACGG |
NAC_tnt.ATAF1_col_a_m1 | 22 | TACGTGTATAATTTGTCTTCTT |
NAC_tnt.ATAF1_colamp_a_d1 | 5 | ACGTA |
NAC_tnt.CUC1_col_v31_m1 | 16 | CGTGTTGAACAAGTAA |
NAC_tnt.CUC1_colamp_a_m1 | 19 | AGGTAACGTGTTGAACAAG |
NAC_tnt.CUC2_col_m1 | 19 | CGTGTGGAACAAGTAACCT |
NAC_tnt.CUC2_colamp_a_m1 | 16 | TAACGTGTAAAACAAG |
NAC_tnt.CUC3_col_a_m1 | 18 | ACGTGTAAAACAAGCAAC |
NAC_tnt.CUC3_colamp_a_m1 | 16 | CTTGTTCTACACGTTA |
NAC_tnt.NAC2_col_v3a_m1 | 17 | CTTGTTCCACAAGAAAC |
NAC_tnt.NAC2_colamp_a_m1 | 16 | CTTGTTCCACAAGAAA |
NAC_tnt.NAM_col_v3a_m1 | 19 | TTACGTGTTTTACACGTAA |
NAC_tnt.NAM_colamp_a_m1 | 11 | ACACGTAACTT |
NAC_tnt.NAP_col_v3a_m1 | 11 | ACACGTAACTT |
NAC_tnt.NAP_colamp_a_m1 | 17 | TTACGTGTATAACACGG |
NAC_tnt.NST1_col_v31_m1 | 17 | TAACGTAAAATTCAAGC |
NAC_tnt.NST1_colamp_a_m1 | 15 | CGTGAAATTCAAGCA |
NAC_tnt.NTL8_col_m1 | 19 | GTTTCTTCATCTTCAAGTA |
NAC_tnt.NTM1_col_a_m1 | 15 | ACTTGTTCAATAAGT |
NAC_tnt.NTM1_colamp_a_m1 | 21 | AAAAAAAAAGAAAAAGTAAAA |
NAC_tnt.NTM2_col_b_m1 | 15 | TACTTCTTCAATAAG |
NAC_tnt.SMB_col_a_m1 | 21 | GGTAGCGTGAAATTCAAGCAA |
NAC_tnt.SMB_colamp_a_m1 | 16 | CGTGAAATTCAAGCAA |
NAC_tnt.SND2_col_a_m1 | 15 | CTTCTTCTTCACGCT |
NAC_tnt.SND2_colamp_a_m1 | 15 | AGCGTGATGAAGAAG |
NAC_tnt.SND3_col_b_m1 | 15 | AGCGTGTGGAACAAG |
NAC_tnt.SND3_colamp_a_m1 | 22 | GTAACTTCTTCCTCACGCTACC |
NAC_tnt.VND1_col_a_m1 | 13 | CTTGTATTTCACG |
NAC_tnt.VND2_col_a_m1 | 15 | CTTGAAAAACAAGCA |
NAC_tnt.VND2_colamp_a_m1 | 23 | TTGCTTGTATTTCACGTTACCTT |
NAC_tnt.VND3_col_m1 | 16 | CTTGAAAAACAAGCAA |
NAC_tnt.VND3_colamp_a_m1 | 17 | CTTGAAAAACAAGCAAC |
NAC_tnt.VND4_col_m1 | 15 | CGTAAAAAACAAGCA |
NAC_tnt.VND4_colamp_a_m1 | 16 | CGTAAAAAACAAGCAA |
NAC_tnt.VND6_col_v31_m1 | 21 | TTGCTTGTATTTTACGCAACC |
NAC_tnt.VND6_colamp_a_m1 | 15 | TGCTTGTTTTTCAAG |
ND_tnt.AGL95_col_a_m1 | 15 | AGAAGCTTCTAGAAG |
ND_tnt.ASHR1_col_a_m1 | 15 | TCATCATCACCATCA |
ND_tnt.AT1G63040_col_a_m1 | 6 | TTGAAA |
ND_tnt.AT2G28920_col_a_m1 | 10 | AAAAATATCT |
ND_tnt.FRS9_col_a_m1 | 21 | CTCTCTCTCTCTCTCTCTCTC |
ND_tnt.FRS9_colamp_a_m1 | 30 | TTGAATATTATTGGTTTAGAATTATAAAAA |
NLP_tnt.AtNLP4_col_b_m1 | 15 | GCAGCAGCAGCAGCA |
Orphan_tnt.AT1G23810_col_a_m1 | 17 | TTCTAGAAGCTTCTATA |
Orphan_tnt.AT1G24250_col_a_m1 | 18 | TCCCAACTACCAACTACC |
Orphan_tnt.BBX31_col_a_m1 | 15 | AAAAAGTAAAAAAAA |
PLATZ_tnt.AT2G01818_col_a_m1 | 15 | AGAAGCTTCTAGAAG |
RAV_tnt.RAV1_col_m1 | 17 | CAGATAATTTCTGTTGT |
RAV_tnt.RAV1_colamp_a_m1 | 21 | TTTTCAGGTGATTTCTGTTGT |
REMB3_tnt.AT2G31460_col_a_m1 | 12 | AAAGAAATGATA |
REM_tnt.REM19_col_a_m1 | 15 | AAAAAAAAAAAAAAA |
REM_tnt.REM19_colamp_a_m1 | 21 | ATGAAAAAAAAAAAAAAAAAA |
RWPRK_tnt.NLP7_col_a_m1 | 15 | ATTTGGCTTTTCGGA |
RWPRK_tnt.RKD2_col_a_m1 | 19 | GTGACGTTTCATCTTCCTC |
RWPRK_tnt.RKD2_colamp_a_m1 | 15 | GGAAGATGAAACGTC |
S1Falike_tnt.AT3G09735_col_a_m1 | 15 | AGAAGCTTCTAGAAG |
SBP_tnt.SPL11_col100_a_m1 | 11 | AAAAAGTACAA |
SBP_tnt.SPL13_col_a_m1 | 11 | ATTGTACGGAT |
SBP_tnt.SPL14_col_a_m1 | 11 | TCCGTACAATT |
SBP_tnt.SPL15_col_a_m1 | 14 | AAATTGTACGGACA |
SBP_tnt.SPL15_colamp_a_m1 | 15 | ATTTGTCCGTACAAT |
SBP_tnt.SPL1_col_a_m1 | 11 | AATTGTACGGA |
SBP_tnt.SPL1_colamp_a_m1 | 10 | ATCCGTACAA |
SBP_tnt.SPL3_col_a_m1 | 8 | TCCGTACA |
SBP_tnt.SPL3_colamp_a_m1 | 13 | AATTGTACGGACA |
SBP_tnt.SPL5_col_a_m1 | 12 | AATTGTACGGAC |
SBP_tnt.SPL5_colamp_a_m1 | 10 | TTGTACGGAT |
SBP_tnt.SPL9_col_a_m1 | 11 | ATTGTACGGAT |
SBP_tnt.SPL9_colamp_a_m1 | 11 | AATTGTACGGA |
SRS_tnt.SRS7_col_a_m1 | 23 | AAACCCTAAACCCTAAACCCTAA |
SRS_tnt.SRS7_colamp_a_m1 | 30 | CCCTAAACCCTAAACCCTAAACCCTAAACC |
TCP_tnt.At1g69690_col_a_m1 | 13 | TGGTGGGCCCCAC |
TCP_tnt.At1g69690_colamp_a_m1 | 13 | TGGTGGGCCCCAC |
TCP_tnt.At1g72010_col_m1 | 13 | ATGTGGGCCCCAC |
TCP_tnt.At1g72010_colamp_a_m1 | 13 | ATGTGGGCCCCAC |
TCP_tnt.At2g45680_col_b_m1 | 21 | CCATTTGCCGTGGGTCCCACC |
TCP_tnt.At2g45680_colamp_a_m1 | 11 | GTGGGACCCAC |
TCP_tnt.At5g08330_col_a_m1 | 14 | TGTGGGCCCCACTT |
TCP_tnt.At5g08330_colamp_a_m1 | 12 | TGTGGGCCCCAC |
TCP_tnt.PTF1_col_a_m1 | 13 | GTGGGGACCACAA |
TCP_tnt.PTF1_colamp_a_m1 | 13 | TTGTGGTCCCCAC |
TCP_tnt.TCP14_col_b_m1 | 20 | ACAGAGGATGTGGGACCCAC |
TCP_tnt.TCP16_col_a_m1 | 11 | GTGGGGTCCAC |
TCP_tnt.TCP16_colamp_a_m1 | 11 | TGGGTCCACCA |
TCP_tnt.TCP17_col_a_m1 | 11 | GTGGTCCCCAC |
TCP_tnt.TCP17_colamp_a_m1 | 11 | GTGGGGACCAC |
TCP_tnt.TCP1_col_a_m1 | 30 | TGTGGGCCCCACCTCCTCTCTTGGGCCTAT |
TCP_tnt.TCP20_col_a_m1 | 21 | AAAAAAGCATGTGGGACCCAC |
TCP_tnt.TCP20_colamp_a_m1 | 12 | GTGGGGCCCACC |
TCP_tnt.TCP24_col_m1 | 12 | GTTGGGACCACA |
TCP_tnt.TCP24_colamp_a_m1 | 11 | GTGGGGACCAC |
TCP_tnt.TCP3_col_m1 | 13 | GTTGGGACCACAT |
TCP_tnt.TCP3_colamp_a_m1 | 12 | GTTGGGACCACA |
TCP_tnt.TCP7_col_a_m1 | 11 | GTGGGACCCAC |
Trihelix_tnt.AT1G76870_col_b_m1 | 14 | AAACAAAACCGGAA |
Trihelix_tnt.AT1G76880_col_a_m1 | 16 | ACGGTAAAAAATTAAA |
Trihelix_tnt.AT2G33550_col_a_m1 | 18 | TAAAAAATATACCCTAAA |
Trihelix_tnt.AT2G33550_colamp_a_m1 | 14 | AAAAATGCCCTTAA |
Trihelix_tnt.AT3G10030_col_a_m1 | 14 | AGTTAACGGCGTTA |
Trihelix_tnt.AT3G10030_colamp_a_m1 | 15 | AGTTAACGGCGTTAA |
Trihelix_tnt.AT3G25990_col_a_m1 | 21 | AACCATGGTTAAATTTTAACC |
Trihelix_tnt.AT3G25990_colamp_a_m1 | 20 | TTTTAACTATGGTTAAGTTT |
Trihelix_tnt.AT3G58630_col_a_m1 | 15 | AAATCTCCGGCGACG |
Trihelix_tnt.AT3G58630_colamp_a_m1 | 15 | AATTCTCCGGCGACG |
Trihelix_tnt.AT5G05550_col_a_m1 | 15 | TTTCTCCGGCGATGA |
Trihelix_tnt.AT5G05550_colamp_a_m1 | 15 | TATCTCCGGCGACGA |
Trihelix_tnt.AT5G47660_col_a_m1 | 15 | TTTTTTTTTTACCGT |
Trihelix_tnt.AT5G47660_colamp_a_m1 | 15 | TAACAACGGTAAAAA |
Trihelix_tnt.At3g14180_col_m1 | 11 | TCGCCGGAAAA |
Trihelix_tnt.GT1_col_a_m1 | 19 | AATTAACCATGGTTAAAAT |
Trihelix_tnt.GT2_col_a_m1 | 14 | TTTTTTACCGTTTT |
Trihelix_tnt.GT2_colamp_a_m1 | 11 | ACGGTAAAAAA |
Trihelix_tnt.GT3a_col_a_m1 | 17 | AACACGTGTTAAATTTG |
Trihelix_tnt.GTL1_col_a_m1 | 10 | ACGGTAAAAA |
Trihelix_tnt.GTL1_colamp_a_m1 | 10 | ACGGTAAAAA |
WRKY_tnt.WRKY11_col_a_m1 | 14 | AGCGTTGACTTTTT |
WRKY_tnt.WRKY14_col_a_m1 | 13 | AAAAGTCAACGAT |
WRKY_tnt.WRKY14_colamp_a_m1 | 13 | AAAAGTCAACGCT |
WRKY_tnt.WRKY15_col_b_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY15_colamp_a_m1 | 12 | GCGTTGACTTTT |
WRKY_tnt.WRKY17_col_a_m1 | 14 | AAAAAGTCAACGCC |
WRKY_tnt.WRKY17_colamp_a_m1 | 13 | AAAAAGTCAACGC |
WRKY_tnt.WRKY18_col_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY18_colamp_a_m1 | 13 | CGTTGACTTTTTT |
WRKY_tnt.WRKY20_col_a_m1 | 13 | AACGTTGACTATT |
WRKY_tnt.WRKY21_col_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY21_colamp_a_m1 | 13 | AGCGTTGACTTTT |
WRKY_tnt.WRKY22_col_m1 | 13 | AAAAGTCAACGAT |
WRKY_tnt.WRKY22_colamp_a_m1 | 13 | ATCGTTGACTTTT |
WRKY_tnt.WRKY24_col_a_m1 | 14 | TCGTTGACTTTTTT |
WRKY_tnt.WRKY24_colamp_a_m1 | 13 | ATCGTTGACTTTT |
WRKY_tnt.WRKY25_col_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY25_colamp_a_m1 | 15 | AGCGTTGACTTTTTT |
WRKY_tnt.WRKY26_col_a_m1 | 13 | AAAAGTCAACGGT |
WRKY_tnt.WRKY26_colamp_a_m1 | 11 | CGTTGACTTTT |
WRKY_tnt.WRKY27_col_a_m1 | 13 | ATCGTTGACTTTT |
WRKY_tnt.WRKY27_colamp_a_m1 | 13 | AAAAGTCAACGAT |
WRKY_tnt.WRKY28_col_a_m1 | 13 | ATCGTTGACTTTT |
WRKY_tnt.WRKY28_colamp_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY29_col_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY29_colamp_a_m1 | 13 | AAAAGTCAACGAT |
WRKY_tnt.WRKY30_col_a_m1 | 11 | AAAGTCAACGC |
WRKY_tnt.WRKY30_colamp_a_m1 | 13 | AAAAGTCAACGCT |
WRKY_tnt.WRKY31_col_a_m1 | 19 | GGATAAAAAAAAGTCAACG |
WRKY_tnt.WRKY31_colamp_a_m1 | 13 | AGCGTTGACTTTT |
WRKY_tnt.WRKY33_col_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY3_col_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY40_col_m1 | 15 | AACGTTGACTTTTTT |
WRKY_tnt.WRKY40_colamp_a_m1 | 13 | AAAAAAGTCAACG |
WRKY_tnt.WRKY42_col_a_m1 | 21 | TTTTAATTAGCGTTGACTTTT |
WRKY_tnt.WRKY42_colamp_a_m1 | 20 | AAATAAAAGTCAACGCTAAT |
WRKY_tnt.WRKY43_col_a_m1 | 14 | GTCGTTGACTTTTT |
WRKY_tnt.WRKY43_colamp_a_m1 | 15 | AAAAAAAGTCAACGA |
WRKY_tnt.WRKY45_col_a_m1 | 12 | CGTTGACTTTTT |
WRKY_tnt.WRKY45_colamp_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY46_col_a_m1 | 11 | CGTTGACTTTG |
WRKY_tnt.WRKY46_colamp_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY47_col_a_m1 | 14 | ACCGGCGTTGACTT |
WRKY_tnt.WRKY47_colamp_a_m1 | 19 | AATTATCGTTGACTTTTTT |
WRKY_tnt.WRKY50_col_a_m1 | 13 | CTTTGACTTTTTT |
WRKY_tnt.WRKY50_colamp_a_m1 | 11 | AAAAGTCAAAG |
WRKY_tnt.WRKY55_col_a_m1 | 12 | AGCGTTGACTTT |
WRKY_tnt.WRKY59_col_a_m1 | 12 | AAAAAGTCAAAG |
WRKY_tnt.WRKY65_col_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY65_colamp_a_m1 | 12 | GCGTTGACTTTT |
WRKY_tnt.WRKY6_col_a_m1 | 19 | CGTTGACTTTTTTTAACAT |
WRKY_tnt.WRKY6_colamp_a_m1 | 15 | AGCGTTGACTTTTTT |
WRKY_tnt.WRKY70_col_m1 | 13 | AGCGTTGACTTTT |
WRKY_tnt.WRKY71_col_a_m1 | 11 | AAAAGTCAACG |
WRKY_tnt.WRKY75_col_a_m1 | 13 | AAAAGTCAACGAC |
WRKY_tnt.WRKY75_colamp_a_m1 | 13 | ATCGTTGACTTTT |
WRKY_tnt.WRKY7_col_m1 | 14 | AGCGTTGACTTTTT |
WRKY_tnt.WRKY7_colamp_a_m1 | 21 | TAAAAGAAAAAAAGTCAACGA |
WRKY_tnt.WRKY8_col_m1 | 15 | AAAAAAGTCAACGAT |
WRKY_tnt.WRKY8_colamp_a_m1 | 15 | AATCGTTGACTTTTT |
ZFHD_tnt.ATHB23_col_b_m1 | 22 | AATCTTAATTAATTAATAAATT |
ZFHD_tnt.ATHB23_colamp_a_m1 | 11 | CTTAATTAATT |
ZFHD_tnt.ATHB24_col_a_m1 | 15 | AAATGTAATTAATTA |
ZFHD_tnt.ATHB24_colamp_a_m1 | 15 | AAAAATAATTAATTA |
ZFHD_tnt.ATHB25_col_a_m1 | 15 | TAATTAATTAAGTTT |
ZFHD_tnt.ATHB25_colamp_a_m1 | 11 | CGTAATTAATG |
ZFHD_tnt.ATHB33_col_a_m1 | 11 | ACGTAATTAAT |
ZFHD_tnt.ATHB33_colamp_a_m1 | 15 | AAAAACGTAATTAAT |
ZFHD_tnt.ATHB34_col_a_m1 | 15 | TTTAATCATTAATTA |
ZFHD_tnt.ATHB34_colamp_a_m1 | 15 | TAAAACATGATTAAT |
ZFHD_tnt.AtHB32_col200_a_m1 | 11 | AATCGCATTAT |
bHLH_tnt.BIM1_col_a_m1 | 14 | CACGTGACATCCAC |
bHLH_tnt.BIM1_colamp_a_m1 | 22 | TGTCACGTGACTTTCACGTGCT |
bHLH_tnt.BIM2_col_v3b_m1 | 15 | CACGTGACTTTCACG |
bHLH_tnt.BIM2_colamp_m1 | 19 | GCCACGTGAATGGCACGTG |
bHLH_tnt.BIM3_col_a_m1 | 18 | ACGTGAATGTCACGTGAC |
bHLH_tnt.PIF7_col_a_m1 | 15 | GTGAATGCCACGTGG |
bHLH_tnt.bHLH104_col_b_m1 | 20 | GACACGTGTCAGCCCCGGGC |
bHLH_tnt.bHLH10_col_a_m1 | 14 | GAATGTGTCGGTGG |
bHLH_tnt.bHLH10_colamp_a_m1 | 13 | ATTGTCGGTGGAG |
bHLH_tnt.bHLH122_col100_a_m1 | 14 | TTAGCAACTTGCAT |
bHLH_tnt.bHLH122_colamp_a_m1 | 11 | TGCAACTTGCA |
bHLH_tnt.bHLH130_col_a_m1 | 11 | AGCAACTTGCA |
bHLH_tnt.bHLH157_col_a_m1 | 20 | ACAAATTGAACACGTCTCTT |
bHLH_tnt.bHLH18_col_a_m1 | 17 | CACGTGTTTCACGTGGT |
bHLH_tnt.bHLH28_col_a_m1 | 12 | AATTGTACGGAC |
bHLH_tnt.bHLH31_col_m1 | 21 | GAGGTGGCACGTGGCATTCAC |
bHLH_tnt.bHLH34_col_m1 | 23 | GTGGATGACACGTGTCAACACGT |
bHLH_tnt.bHLH34_colamp_a_m1 | 21 | TGGCACGTGTCATACACGTGC |
bHLH_tnt.bHLH64_col_a_m1 | 6 | ACCAGT |
bHLH_tnt.bHLH69_col_a_m1 | 15 | CGTGTTTGGCACGTG |
bHLH_tnt.bHLH74_col_a_m1 | 21 | CGTGAAAAGCACGTGACACCT |
bHLH_tnt.bHLH74_colamp_a_m1 | 8 | CACGTGAC |
bHLH_tnt.bHLH77_col_a_m1 | 15 | GAGAGGTCACGTGCG |
bHLH_tnt.bHLH80_col_a_m1 | 11 | TGCAAGTTGCA |
bHLH_tnt.bHLH80_colamp_a_m1 | 11 | TGCAACTTGCA |
bZIP_tnt.ABF2_col_v3a_m1 | 18 | AAAAATGCCACGTGACCA |
bZIP_tnt.ABI5_col_v3h_m1 | 18 | AAATGGTGACGTGGCAGT |
bZIP_tnt.ABI5_colamp_v3b_m1 | 15 | AATGGTGACGTGGCA |
bZIP_tnt.AREB3_col_v31_m1 | 15 | AATGGACACGTGGCA |
bZIP_tnt.AREB3_colamp_a_m1 | 15 | AATGGACACGTGGCA |
bZIP_tnt.GBF3_col_m1 | 15 | TGCCACGTCAGCATT |
bZIP_tnt.GBF3_colamp_m1 | 15 | AATGGTCACGTGGCA |
bZIP_tnt.GBF5_col_v3a_m1 | 15 | AATGCTGACGTGGCA |
bZIP_tnt.GBF5_colamp_a_m1 | 15 | AATGCTGACGTGGCA |
bZIP_tnt.GBF6_col_m1 | 15 | TGCCACGTCAGCATC |
bZIP_tnt.GBF6_colamp_a_m1 | 15 | AATGCTGACGTGGCA |
bZIP_tnt.HY5_colamp_v3a_m1 | 15 | AATGATGACGTGGCC |
bZIP_tnt.TGA10_col_a_m1 | 15 | GATGATGACGTCACT |
bZIP_tnt.TGA10_colamp_a_m1 | 14 | AATGACGTCATCAT |
bZIP_tnt.TGA1_col_m1 | 15 | AATGATGACGTCATC |
bZIP_tnt.TGA1_colamp_a_m1 | 15 | AAGATGACGTCATCA |
bZIP_tnt.TGA2_col_m1 | 20 | AATGACGTCATCATTATTGT |
bZIP_tnt.TGA2_colamp_v31_m1 | 11 | TGACGTCACCA |
bZIP_tnt.TGA3_col_m1 | 14 | GATGACGTCATCAT |
bZIP_tnt.TGA3_colamp_a_m1 | 13 | TGATGACGTCATC |
bZIP_tnt.TGA4_col_a_m1 | 11 | TGACGTCATCA |
bZIP_tnt.TGA4_colamp_a_m1 | 15 | AATGATGACGTCATC |
bZIP_tnt.TGA5_col_v3a_m1 | 14 | AATGACGTCATCAT |
bZIP_tnt.TGA6_col_a_m1 | 15 | AATGACGTCATCATT |
bZIP_tnt.TGA6_colamp_a_m1 | 15 | AATGACGTCATCATC |
bZIP_tnt.TGA9_col_a_m1 | 11 | GATGACGTCAT |
bZIP_tnt.TGA9_colamp_a_m1 | 11 | TGATGACGTCA |
bZIP_tnt.VIP1_col_v3a_m1 | 12 | TTGACAGCTGTA |
bZIP_tnt.VIP1_colamp_a_m1 | 14 | TGTACAGCTGTCAA |
bZIP_tnt.bZIP16_col_v3a_m1 | 15 | AATGGTCACGTGGCA |
bZIP_tnt.bZIP16_colamp_a_m1 | 15 | AATGCTGACGTGGCA |
bZIP_tnt.bZIP18_col_v31_m1 | 11 | ACCAGCTGTCA |
bZIP_tnt.bZIP18_colamp_a_m1 | 11 | ATGACAGCTGG |
bZIP_tnt.bZIP28_col_a_m1 | 15 | AATGATGACGTGGCA |
bZIP_tnt.bZIP3_col_a_m1 | 15 | GATGCTGACGTGGCA |
bZIP_tnt.bZIP42_col_a_m1 | 12 | TGCTGACGTGGC |
bZIP_tnt.bZIP42_colamp_a_m1 | 13 | TGCCACGTCAGCA |
bZIP_tnt.bZIP43_col_a_m1 | 12 | GCCACGTCAGCA |
bZIP_tnt.bZIP44_col_m1 | 15 | GATGCTGACGTGGCA |
bZIP_tnt.bZIP44_colamp_a_m1 | 13 | ATGCTGACGTGGC |
bZIP_tnt.bZIP48_col_a_m1 | 14 | GCCACGTCAGCATC |
bZIP_tnt.bZIP48_colamp_a_m1 | 15 | TGCCACGTCAGCATT |
bZIP_tnt.bZIP50_col_v31_m1 | 17 | TGATGACGTCATCTTTT |
bZIP_tnt.bZIP50_colamp_v31_m1 | 14 | CTGACGTCATCATC |
bZIP_tnt.bZIP52_col_v31_m1 | 14 | TTGACAGCTGGTCA |
bZIP_tnt.bZIP52_colamp_a_m1 | 14 | TGACCAGCTGTCAT |
bZIP_tnt.bZIP53_col_m1 | 15 | GATGCTGACGTGGCA |
bZIP_tnt.bZIP53_colamp_a_m1 | 15 | TATGCTGACGTGGCA |
bZIP_tnt.bZIP68_col_a_m1 | 15 | TGCCACGTCAGCATC |
bZIP_tnt.bZIP69_col_a_m1 | 11 | TACAGCTGGCA |
bZIP_tnt.bZIP69_colamp_a_m1 | 11 | GACAGCTGGCA |
mTERF_tnt.AT5G23930_col_a_m1 | 20 | CGCCGCCGCCACCGCCGCCG |
zfGRF_tnt.AT3G42860_col_a_m1 | 11 | AAAAGTCAACG |
Random model letter frequencies (./background):
A 0.306 C 0.194 G 0.194 T 0.306
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|
Command line:
fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_19 --bgfile ./background --motif HSF_tnt.HSF3_colamp_a_d1 db/ARABD/ArabidopsisDAPv1.meme ./bZIP_intersect_summits.fasta
Settings:
output_directory = fimo_out_19 | MEME file name = db/ARABD/ArabidopsisDAPv1.meme | sequence file name = ./bZIP_intersect_summits.fasta |
background file name = ./background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.