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Molecular Research Efforts in Urothelial Carcinoma

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Pathology, Diagnostics, and Therapeutics".

Deadline for manuscript submissions: closed (31 December 2018) | Viewed by 33087

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Guest Editor
Department of Urology, Medizinische Universitat Graz, Graz, Austria
Interests: advanced; metastatic renal cell carcinoma; urologic surgery; urothelial carcinoma of the upper urinary tract; bladder cancer; oncologic outcomes research
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Special Issue Information

Dear Colleagues,

Urothelial carcinoma of the bladder (UCB), as well as urothelial carcinoma of the upper urinary tract, represent one of the most interesting and emerging fields in terms of molecular oncology and uro-oncologic discovery efforts over recent years.

The Cancer Genome Atlas (TCGA), the International Cancer Genome Consortium (ICGC) projects, and others are successful drivers in promoting genome sequencing efforts for the development of various genetic and molecular sub-classification systems in non-invasive, as well as muscle invasive UCB. Recently, several molecular subtypes of muscle-invasive UCB have been identified, of whom the basal subtype shared biomarkers with basal breast cancers and that were characterized by p63 activation, squamous differentiation, and aggressive disease at presentation [1]. Luminal muscle-invasive UCBs contained features of active PPARγ and estrogen receptor transcription, moreover they were enriched with activating FGFR3 mutations. p53-like UCBs were resistant to neoadjuvant MVAC-chemotherapy, adopting a p53-like phenotype after therapy. These findings have important implications for better prognostication, the future development of targeted agents, as well as disease management with chemotherapy.

Based on the progress in molecular oncology and cancer genetics in UCB, novel treatment options including immune-oncology drugs, FGFR inhibitors or other targeted agents are approved or under development. Research efforts should lead to the discovery of novel predictive biomarkers in this emerging field. In addition to alterations in transcriptome and proteome, epigenetic factors, DNA repair mechanisms and non-coding RNAs have been proposed as pathogenic drivers, tumor suppressors and factors in treatment resistance and patient’s clinical outcome.

Apart from the molecular viewpoint, the required treatment modalities (both surgical and medical), long-term follow-up of patients, as well enormous associated costs of UCB represent a tremendously growing and unsolved public health problem worldwide. Regarding the ten leading cancer types among males in the United States in 2018, estimated new UCB cases rank fourth, the associated estimated deaths rank at the eighth position, respectively [2].

Thus, an improved understanding of the underlying molecular mechanisms in UCB development is of paramount interest, not only to optimize treatment outcomes but to improve cost effective management modalities in this important malignancy. Original research articles, review articles, as well as research letters covering the large field of cancer genetics, molecular oncology, cell biology and newly discovered prognostic biomarkers of urothelial carcinoma are strongly invited.

References

  1. Choi, W.; Porten, S.; Kim, S.; Willis, D.; Plimack, E.R.; Hoffman-Censits, J.; Roth, B.; Cheng, T.; Tran, M.; Lee, I.L.; et al. Identification of distinct basal and luminal subtypes of muscle-invasive bladder cancer with different sensitivities to frontline chemotherapy. Cancer Cell 2014, 25, 152–165.
  2. Siegel, R.L.; Miller, K.D.; Jemal, A. Cancer statistics, 2018. CA Cancer J. Clin. 2018, 68, 7–30.

Prof. Dr. Georg C. Hutterer
Guest Editor

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Keywords

  • Urothelial carcinoma of the bladder;
  • Urothelial carcinoma of the upper urinary tract;
  • Biomarkers;
  • Targeted agents;
  • Immune-oncology drugs;
  • Epigenetic factors;
  • DNA repair;
  • Tumor suppressor factor

 

Published Papers (9 papers)

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15 pages, 4770 KiB  
Article
BGJ398, A Pan-FGFR Inhibitor, Overcomes Paclitaxel Resistance in Urothelial Carcinoma with FGFR1 Overexpression
by Se Hyun Kim, Haram Ryu, Chan-Young Ock, Koung Jin Suh, Ji Yun Lee, Ji-Won Kim, Jeong-Ok Lee, Jin Won Kim, Yu Jung Kim, Keun-Wook Lee, Soo-Mee Bang, Jee Hyun Kim, Jong Seok Lee, Joong Bae Ahn, Kui-Jin Kim and Sun Young Rha
Int. J. Mol. Sci. 2018, 19(10), 3164; https://doi.org/10.3390/ijms19103164 - 15 Oct 2018
Cited by 16 | Viewed by 4537
Abstract
Paclitaxel (PTX) is commonly used to treat urothelial carcinoma (UC) after platinum-based chemotherapy has failed. However, single-agent taxane therapy is not sufficient to inhibit tumor progression and drug resistance in advanced UC. Epithelial-to-mesenchymal transition (EMT) induced by fibroblast growth factor receptor (FGFR [...] Read more.
Paclitaxel (PTX) is commonly used to treat urothelial carcinoma (UC) after platinum-based chemotherapy has failed. However, single-agent taxane therapy is not sufficient to inhibit tumor progression and drug resistance in advanced UC. Epithelial-to-mesenchymal transition (EMT) induced by fibroblast growth factor receptor (FGFR)1 signaling has been proposed as a mechanism of PTX resistance, but it is unclear whether this can be overcome by FGFR1 inhibition. The present study investigated whether FGFR1 overexpression contributes to PTX resistance and whether FGFR inhibition can enhance PTX efficacy in UC. The effects of PTX combined with the FGFR inhibitor BGJ398 were evaluated in UC cell lines by flow cytometry; Western blot analysis; cell viability, migration, and colony forming assays; and RNA interference. PTX+BGJ398 induced cell cycle arrest and apoptosis in UC cells with mesenchymal characteristics was accompanied by downregulation of cyclin D1 protein and upregulation of gamma-histone 2A family member X and cleaved poly(ADP-ribose) polymerase. Additionally, PTX+BGJ398 synergistically suppressed UC cell migration and colony formation via regulation of EMT-associated factors, while FGFR1 knockdown enhanced the antitumor effect of PTX. These findings provide a basis for development of effective strategies for overcoming PTX resistance in UC through inhibition of FGFR1 signaling. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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14 pages, 841 KiB  
Review
Metabolic and Molecular Basis of Sarcopenia: Implications in the Management of Urothelial Carcinoma
by Hiroshi Fukushima, Yasuhisa Fujii and Fumitaka Koga
Int. J. Mol. Sci. 2019, 20(3), 760; https://doi.org/10.3390/ijms20030760 - 11 Feb 2019
Cited by 19 | Viewed by 4659
Abstract
Sarcopenia, which represents the degenerative and systemic loss of skeletal muscle mass, is a multifactorial syndrome caused by various clinical conditions. Sarcopenia reflects not only frailty and poor general health status, but also the possible presence of advanced or progressive cancer or cancer [...] Read more.
Sarcopenia, which represents the degenerative and systemic loss of skeletal muscle mass, is a multifactorial syndrome caused by various clinical conditions. Sarcopenia reflects not only frailty and poor general health status, but also the possible presence of advanced or progressive cancer or cancer cachexia. Therefore, sarcopenia affects the management of cancer-bearing patients, including those with urothelial carcinoma. Recently, growing evidence has shown that sarcopenia is significantly associated with higher rates of treatment-related complications and worse prognosis in patients with urothelial carcinoma, including muscle-invasive bladder cancer, upper tract urothelial carcinoma, and advanced urothelial carcinoma. Moreover, several studies reported that a post-therapeutic increase in skeletal muscle mass predicts favorable prognosis in urothelial carcinoma patients. To further explore the role of sarcopenia in the management of urothelial carcinoma patients, comprehensive understanding of its pathophysiology is vital. In this article, we reviewed the metabolic and molecular basis of cancer cachexia and sarcopenia. From this viewpoint, we discussed the possible mechanism of changes in skeletal muscle mass during the course of treatment. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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16 pages, 277 KiB  
Review
Molecular Predictors of Complete Response Following Neoadjuvant Chemotherapy in Urothelial Carcinoma of the Bladder and Upper Tracts
by Jennifer Tse, Rashed Ghandour, Nirmish Singla and Yair Lotan
Int. J. Mol. Sci. 2019, 20(4), 793; https://doi.org/10.3390/ijms20040793 - 13 Feb 2019
Cited by 26 | Viewed by 3639
Abstract
Urothelial carcinoma of the bladder (UCB) and upper tracts (UTUC) is often regarded as one entity and is managed generally with similar principles. While neoadjuvant chemotherapy (NAC) followed by radical cystectomy (RC) is an established standard of care in UCB, strong evidence for [...] Read more.
Urothelial carcinoma of the bladder (UCB) and upper tracts (UTUC) is often regarded as one entity and is managed generally with similar principles. While neoadjuvant chemotherapy (NAC) followed by radical cystectomy (RC) is an established standard of care in UCB, strong evidence for a similar approach is lacking in UTUC. The longest survival is seen in patients with complete response (pT0) on pathological examination of the RC specimen, but impact of delayed RC in nonresponders may be detrimental. The rate of pT0 following NAC in UTUC is considerably lower than that in UCB due to differences in access and instrumentation. Molecular markers have been evaluated to try to predict response to chemotherapy to reduce unnecessary treatment and expedite different treatment for nonresponders. A variety of potential biomarkers have been evaluated to predict response to cisplatin based chemotherapy including DNA repair genes (ATM, RB1, FANCC, ERCC2, BRCA1, and ERCC1), regulators of apoptosis (survivin, Bcl-xL, and emmprin), receptor tyrosine kinases (EGFR and erbB2), genes involved in cellular efflux (MDR1 and CTR1), in addition to molecular subtypes (Basal, luminal, and p53-like). The current state of the literature on the prediction of response to NAC based on the presence of these biomarkers is discussed in this review. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
14 pages, 3068 KiB  
Article
Exercise Training Impacts Cardiac Mitochondrial Proteome Remodeling in Murine Urothelial Carcinoma
by Rita Ferreira, Maria João Neuparth, Rita Nogueira-Ferreira, Sandra Magalhães, Miguel Aroso, José António Bovolini, Lúcio Lara Santos, Paula Oliveira, Rui Vitorino and Daniel Moreira-Gonçalves
Int. J. Mol. Sci. 2019, 20(1), 127; https://doi.org/10.3390/ijms20010127 - 31 Dec 2018
Cited by 5 | Viewed by 3834
Abstract
Cardiac dysfunction secondary to cancer may exert a negative impact in patients’ tolerance to therapeutics, quality of life, and survival. The aim of this study was to evaluate the potential therapeutic effect of exercise training on the heart in the setting of cancer, [...] Read more.
Cardiac dysfunction secondary to cancer may exert a negative impact in patients’ tolerance to therapeutics, quality of life, and survival. The aim of this study was to evaluate the potential therapeutic effect of exercise training on the heart in the setting of cancer, after diagnosis. Thus, the molecular pathways harbored in heart mitochondria from a murine model of chemically-induced urothelial carcinoma submitted to 8-weeks of high intensity treadmill exercise were characterized using mass spectrometry-based proteomics. Data highlight the protective effects of high intensity exercise training in preventing left ventricle diastolic dysfunction, fibrosis, and structural derangement observed in tumor-bearing mice. At the mitochondrial level, exercise training counteracted the lower ability to produce ATP observed in the heart of animals with urothelial carcinoma and induced the up-regulation of fatty acid oxidation and down-regulation of the biological process “cardiac morphogenesis”. Taken together, our data support the prescription of exercise training after cancer diagnosis for the management of disease-related cardiac dysfunction. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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15 pages, 2579 KiB  
Article
Obatoclax, a BH3 Mimetic, Enhances Cisplatin-Induced Apoptosis and Decreases the Clonogenicity of Muscle Invasive Bladder Cancer Cells via Mechanisms That Involve the Inhibition of Pro-Survival Molecules as Well as Cell Cycle Regulators
by Thomas M. Steele, George C. Talbott, Anhao Sam, Clifford G. Tepper, Paramita M. Ghosh and Ruth L. Vinall
Int. J. Mol. Sci. 2019, 20(6), 1285; https://doi.org/10.3390/ijms20061285 - 14 Mar 2019
Cited by 16 | Viewed by 2775
Abstract
Several studies by our group and others have determined that expression levels of Bcl-2 and/or Bcl-xL, pro-survival molecules which are associated with chemoresistance, are elevated in patients with muscle invasive bladder cancer (MI-BC). The goal of this study was to determine whether combining [...] Read more.
Several studies by our group and others have determined that expression levels of Bcl-2 and/or Bcl-xL, pro-survival molecules which are associated with chemoresistance, are elevated in patients with muscle invasive bladder cancer (MI-BC). The goal of this study was to determine whether combining Obatoclax, a BH3 mimetic which inhibits pro-survival Bcl-2 family members, can improve responses to cisplatin chemotherapy, the standard of care treatment for MI-BC. Three MI-BC cell lines (T24, TCCSuP, 5637) were treated with Obatoclax alone or in combination with cisplatin and/or pre-miR-34a, a molecule which we have previously shown to inhibit MI-BC cell proliferation via decreasing Cdk6 expression. Proliferation, clonogenic, and apoptosis assays confirmed that Obatoclax can decrease cell proliferation and promote apoptosis in a dose-dependent manner. Combination treatment experiments identified Obatoclax + cisplatin as the most effective treatment. Immunoprecipitation and Western analyses indicate that, in addition to being able to inhibit Bcl-2 and Bcl-xL, Obatoclax can also decrease cyclin D1 and Cdk4/6 expression levels. This has not previously been reported. The combined data demonstrate that Obatoclax can inhibit cell proliferation, promote apoptosis, and significantly enhance the effectiveness of cisplatin in MI-BC cells via mechanisms that likely involve the inhibition of both pro-survival molecules and cell cycle regulators. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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14 pages, 724 KiB  
Review
Tropomyosins: Potential Biomarkers for Urothelial Bladder Cancer
by Nada Humayun-Zakaria, Roland Arnold, Anshita Goel, Douglas Ward, Stuart Savill and Richard T. Bryan
Int. J. Mol. Sci. 2019, 20(5), 1102; https://doi.org/10.3390/ijms20051102 - 04 Mar 2019
Cited by 7 | Viewed by 3541
Abstract
Despite the incidence and prevalence of urothelial bladder cancer (UBC), few advances in treatment and diagnosis have been made in recent years. In this review, we discuss potential biomarker candidates: the tropomyosin family of genes, encoded by four loci in the human genome. [...] Read more.
Despite the incidence and prevalence of urothelial bladder cancer (UBC), few advances in treatment and diagnosis have been made in recent years. In this review, we discuss potential biomarker candidates: the tropomyosin family of genes, encoded by four loci in the human genome. The expression of these genes is tissue-specific. Tropomyosins are responsible for diverse cellular roles, most notably based upon their interplay with actin to maintain cellular processes, integrity and structure. Tropomyosins exhibit a large variety of splice forms, and altered isoform expression levels have been associated with cancer, including UBC. Notably, tropomyosin isoforms are detectable in urine, offering the potential for non-invasive diagnosis and risk-stratification. This review collates the basic knowledge on tropomyosin and its isoforms, and discusses their relationships with cancer-related phenomena, most specifically in UBC. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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16 pages, 556 KiB  
Review
Aristolochic Acid and Immunotherapy for Urothelial Carcinoma: Directions for unmet Needs
by Huang-Yu Yang, Chih-Chao Yang, Chao-Yi Wu, Li-Jen Wang and Kun-Lin Lu
Int. J. Mol. Sci. 2019, 20(13), 3162; https://doi.org/10.3390/ijms20133162 - 28 Jun 2019
Cited by 10 | Viewed by 3588
Abstract
Urothelial carcinoma of the bladder (UCB) and upper tracts (UTUC) used to share management with similar principles. However, their genetic and epigenetic differences along with different responses to immunotherapy were recently identified, which are reminiscent of their distinct etiologies. Different from the variety [...] Read more.
Urothelial carcinoma of the bladder (UCB) and upper tracts (UTUC) used to share management with similar principles. However, their genetic and epigenetic differences along with different responses to immunotherapy were recently identified, which are reminiscent of their distinct etiologies. Different from the variety of environmental factors relating to UCB, UTUC is best known for its close relationship with exposure to aristolochic acid (AA). AA is believed to cause its carcinogenicity through forming DNA adducts of deoxyadenosine-aristolactam, as well as A:T → T:A transversions in the TP53 tumor suppressor gene. Since recent findings suggested that cancers with higher somatic mutations are associated with better treatment responses upon immune checkpoint blockade, UTUC and AA-related biomarkers reasonably serve as good candidates, as well as a potential prognostic predictor for the flourishing immunotherapy. This review covers the current state of the literature on the clinical response of UTUC and UCB receiving immunotherapy and points out directions for refinement regarding patient selection. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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19 pages, 5341 KiB  
Article
Transcriptional Analysis of Immunohistochemically Defined Subgroups of Non-Muscle-Invasive Papillary High-Grade Upper Tract Urothelial Carcinoma
by Minsun Jung, Jeong Hoon Lee, Bohyun Kim, Jeong Hwan Park and Kyung Chul Moon
Int. J. Mol. Sci. 2019, 20(3), 570; https://doi.org/10.3390/ijms20030570 - 29 Jan 2019
Cited by 12 | Viewed by 3674
Abstract
Immunohistochemical (IHC) staining for CK5/6 and CK20 was reported to be correlated with the prognosis of early urothelial carcinoma in a way contrary to that of advanced tumors for unknown reasons. We aimed to characterize the gene expression profiles of subgroups of non-muscle-invasive [...] Read more.
Immunohistochemical (IHC) staining for CK5/6 and CK20 was reported to be correlated with the prognosis of early urothelial carcinoma in a way contrary to that of advanced tumors for unknown reasons. We aimed to characterize the gene expression profiles of subgroups of non-muscle-invasive papillary high-grade upper tract urothelial carcinoma (UTUC) classified by CK5/6 and CK20 expression levels: group 1 (CK5/6-high/CK20-low), group 2 (CK5/6-high/CK20-high), and group 3 (CK5/6-low/CK20-high). Expression of group 3 was predictive of worse prognosis of non-muscle-invasive papillary high-grade UTUC. Transcriptional analysis revealed 308 differentially expressed genes across the subgroups. Functional analyses of the genes identified cell adhesion as a common process differentially enriched in group 3 compared to the other groups, which could explain its high-risk phenotype. Late cell cycle/proliferation signatures were also enriched in group 3 and in some of the other groups, which may be used as a prognostic biomarker complementary to CK5/6 and CK20. Group 2, characterized by low levels of genes associated with mitogen-activated protein kinase and tumor necrosis factor signaling pathways, was hypothesized to represent the least cancerous subtype considering its normal urothelium-like IHC pattern. This study would facilitate the application of easily accessible prognostic biomarkers in practice. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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8 pages, 189 KiB  
Editorial
Special Issue on Molecular Research Efforts in Urothelial Carcinoma: Summary of Included Topics
by Georg C. Hutterer
Int. J. Mol. Sci. 2019, 20(15), 3790; https://doi.org/10.3390/ijms20153790 - 02 Aug 2019
Cited by 2 | Viewed by 2270
Abstract
This Special Issue of International Journal of Molecular Sciences (IJMS) covers one of the most intriguing and emerging fields in terms of molecular oncology and uro-oncologic research efforts over the recent years, namely urothelial carcinoma of the bladder (UCB), as well as urothelial [...] Read more.
This Special Issue of International Journal of Molecular Sciences (IJMS) covers one of the most intriguing and emerging fields in terms of molecular oncology and uro-oncologic research efforts over the recent years, namely urothelial carcinoma of the bladder (UCB), as well as urothelial carcinoma of the upper urinary tract (UTUC). A total of 8 articles published in this Special Issue highlight the current progress in molecular oncology and cancer genetics in UCB, including a wide range of research topics, such as FGFR-inhibitors, sarcopenia in UCB, molecular predictors of response following neoadjuvant chemotherapy, exercise cardiac training impacts in the murine UCB model, Obatoclax, tropomyosins as potential biomarkers, immunotherapeutic approaches, as well as a transcriptional analysis of immunohistochemically defined UCB-subgroups. Find a brief summary of the respective articles below. Full article
(This article belongs to the Special Issue Molecular Research Efforts in Urothelial Carcinoma)
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