An Integrated Neural Network and SEIR Model to Predict COVID-19
Abstract
:1. Introduction
2. Related Work
3. Methodology
3.1. SEIR Model
3.2. An Integrated SEIR and Neural Network Framework
3.3. Neural Network Model
4. SEIR_NN-Based Apps Development Framework
4.1. Mobile Application
4.2. Controller
Algorithm 1 Calculation process of the SEIR differential equations |
|
4.3. RESTful API
5. Implementation
6. Results
7. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Conflicts of Interest
References
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Ref. No. | Description | Model | Limitation |
---|---|---|---|
[7] | Generated the peak value for multiple infection rates. Visualized the effect of intervention. | SEIR | Cannot calculate results for specific parts of a country. |
[8] | Calculated the quarantine strength and effective reproduction number for more than 500 patients. | SIR+NN | Cannot suggest an end date to the pandemic. |
[9] | A numerical simulation based on real data for predicting the transmission of the novel coronavirus. | SEIR | Cannot predict the number of quarantined persons in a day. |
[10] | Investigated the relationship between vulnerable patients and the number of deaths. | Modified SEIR | Cannot analyze the impact of a lockdown in any area. |
[11] | Forecasted the latest pandemic situation of COVID-19 inside and outside of China until 7 March 2020. | Time varying SIR | Applicable only in China. |
[12] | Introduced a new parameter named testing rates accompanying transmission rate and transition rate. The outcome of this experiment suggests that there is a strong benefit in tracing and moving tests. | Fractional type SEIR | Cannot predict the number of quarantined persons in a day. |
[13] | Predicted the disability-adjusted life years (DALYs) of Iran. The result shows that the total DALYs among women and men are 861 years/100,000 and 1082/100,000, respectively. | Extended SEIR | Cannot suggest an end date to the pandemic. |
[14] | Assessed the impact of non-pharmaceutical interventions during this pandemic | Modified SEIR | Cannot analyze the impact of a lockdown in any area. |
[15] | Considered the exponential phases of this disease in Italy, France, China, Switzerland, Spain, the UK, New York State, and Germany. The range was estimated as 4.7 to 11.4, which was higher than previous estimates. | SEIR | Cannot calculate results for specific parts of a country. |
[18] | The removed compartment was extended using two new compartments: death and cured. The model parameters was estimated depending on the issued data of China. | Improved SEIR | Applicable only in China. |
Batch Size | Units | Optimizer | Activation Function | Mean | Standard Deviation |
---|---|---|---|---|---|
25 | 25 | SGD | Relu | 0.830 | 0.0420 |
25 | 25 | SGD | Sigmoid | 0.835 | 0.0212 |
25 | 25 | Adam | Relu | 0.775 | 0.0353 |
25 | 25 | Adam | Sigmoid | 0.795 | 0.0212 |
32 | 40 | SGD | Sigmoid | 0.890 | 0.0140 |
32 | 40 | SGD | Relu | 0.930 | 0.0670 |
32 | 40 | Adam | Relu | 0.865 | 0.0353 |
32 | 40 | Adam | Sigmoid | 0.930 | 0.0283 |
40 | 50 | SGD | Relu | 0.895 | 0.0353 |
40 | 50 | SGD | Sigmoid | 0.801 | 0.0283 |
40 | 50 | Adam | Relu | 0.790 | 0.0141 |
40 | 50 | Adam | Sigmoid | 0.820 | 0.0283 |
Fold | Training Accuracy | Validation Accuracy | Testing Accuracy |
---|---|---|---|
Fold 1 | 0.974 | 0.931 | 0.915 |
Fold 2 | 0.925 | 0.915 | 0.881 |
Fold 3 | 0.977 | 0.953 | 0.911 |
Fold 4 | 0.958 | 0.912 | 0.897 |
Fold 5 | 0.947 | 0.935 | 0.917 |
Average | 0.956 | 0.929 | 0.904 |
Best | 0.977 | 0.953 | 0.917 |
Model | Mean | Standard Deviation |
---|---|---|
SIR | 0.772 | 0.0352 |
SEIR | 0.797 | 0.0215 |
SIR with NN | 0.835 | 0.0212 |
Proposed Model | 0.895 | 0.0353 |
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Zisad, S.N.; Hossain, M.S.; Hossain, M.S.; Andersson, K. An Integrated Neural Network and SEIR Model to Predict COVID-19. Algorithms 2021, 14, 94. https://doi.org/10.3390/a14030094
Zisad SN, Hossain MS, Hossain MS, Andersson K. An Integrated Neural Network and SEIR Model to Predict COVID-19. Algorithms. 2021; 14(3):94. https://doi.org/10.3390/a14030094
Chicago/Turabian StyleZisad, Sharif Noor, Mohammad Shahadat Hossain, Mohammed Sazzad Hossain, and Karl Andersson. 2021. "An Integrated Neural Network and SEIR Model to Predict COVID-19" Algorithms 14, no. 3: 94. https://doi.org/10.3390/a14030094
APA StyleZisad, S. N., Hossain, M. S., Hossain, M. S., & Andersson, K. (2021). An Integrated Neural Network and SEIR Model to Predict COVID-19. Algorithms, 14(3), 94. https://doi.org/10.3390/a14030094