Reference sequence (1): sp|B2ZDY2|L_WWAVU/12219
Identities normalised by aligned length.
Colored by: consensus/70%
                                  cov    pid    1 [        .         .         .         .         :         .         .         . 80  
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      -MVDCNDRINELKDLIRKWVPDEEAYTEQKTTFLSQVNPSSIITEGLKLLSMLIEIDSCLKHGCVFNRN-KTVNQILKDH     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      ----MDEKVFVLKDFIRRQVPDIPELSYQKEALLSQVEVPMVLTEGFKLLSCLVEIESCRKNSCECNFEQKFVDTILSEN     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      ----MEESVNEIKNLIRKHFPERQELAYQRDIFLSQHHPSSLLLEGFKLLSSLVELESCEAHACQINSDQKFVDVILSDH     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      ----MDEYVQELKGLIRKHIPDRCEFAHQKVTFLSQVHPSPLLTEGFKLLSSLVELESCEAHACQANTDQRFVDVILSDN     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      ----MDTFLLELKDLVRKYVPELVELSFQKDALLSQVHPRLVLVEGFKLLSLLVELESCKVNACRHNFEQKFVDVILSDH     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      MQDPLLGTLSELKDLVRKTIPDVIELAYQKDALLSQVHPRSVLIEGFKLLSLLVELESCKVNACHHNYEQKFIDVILSDG     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      ----MDSLKNELLQLISRNFPNDERLAPQKLKVLCQTEPKFIMIEGLKLLSTCIEIDICDENGCIHNTEEKSVELILREN     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      ----MEEDIACVKDLVSKYLVDNERLSRQKLAFLVQTEPRMLLMEGLKLLSLCIEVDSCNANGCEHNSEDKSVERILHDH     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      ----MDEIISELRELCLNYIEQDERLSRQKLNFLGQREPRMVLIEGLKLLSRCIEIDSADKSGCTHNHDDKSVETILVES     
  consensus/100%                                  ....h.t.h..lhthh.p.h.p..ths.Q+..hLsQhps..lhhEGhKLLS.hlEl-.s..puC.hN.p.+.lp.IL.-t     
  consensus/90%                                   ....h.t.h..lhthh.p.h.p..ths.Q+..hLsQhps..lhhEGhKLLS.hlEl-.s..puC.hN.p.+.lp.IL.-t     
  consensus/80%                                   ....hpp.l.pl+pLlp+.hsp..chu.QK.thLsQhcPp.llhEGhKLLS.hlEl-SCphpuC.hN.-pK.V-hILp-p     
  consensus/70%                                   ....M-phltELKsLlp+hlP-..cLuhQK.shLuQscPp.lLhEGhKLLShhlEl-SCctpuCptNh-pK.V-hILp-p     

                                  cov    pid   81          .         1         .         .         .         .         :         . 160 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      RIIGPTLPDVVPDGYRVSGSTIILLETFVRVNQESFEQKYKHDFEKLIQLSKDLSKCGLILVPVIDGRSNYYVDRFPDWV     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      GVVAPTLPKVIPDGYRFFNKTLILLETFVRVNPEEFEKKWKTDMAKLLSLKEDIHRTGITLVPVVDGRGNYNTDLLPDWA     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      GILCPTLPKVIPDGFKLTGKTLILLETFVRVNPDEFEKKWKSDMSKLLNLKSDLLRAGITLVPVVDGRSSYSNRFLADWV     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      GILCPTLPKVIPDGFKLTGKTLILLETFVRVNPDEFEKKWKADMSKLLNLKHDLQKSGVTLVPIVDGRSNYNNRFVADWV     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      GVICPTLPKVTPDGFNLMGKTLILLETFVRVNPNDFERKWKADMSKLMSLKDDLARVGITMVPVVDGRGSYNTSYLPEWA     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      GILCPTLPKVVPDGYNLMGKTLILLETFVRVNPDDFEKKWKADMSKLISLKTDLGKIGVTLVPVVDGRSNYNTSFVSDWT     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      GFVVPSLPCVTPDGFKVSGNMLILLECFVRLNPLEYEQKYNNDMKKLSSLRGDLEHSGITLVPLVVGRSGYENNSIPDWV     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      GILTPSLCLWYPDGYKLTGNVLILLECFVRSSPANFEQKYIEDFKKLEQLKEDLKSVDINLIPLIDGRTSFYNEQIPDWV     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      GIVCPGLPLIIPDGYKLIDNSLILLECFVRSSPASFEKKFIEDTNKLACIREDLAVAGVTLVPIVDGRCDYDNSFMPEWA     
  consensus/100%                                  thlsPsLs.hhPDGaph.sp.lILLEsFVR.s..paEpKa.tDhtKL.plptDl...sl.hlPllsGRssa.sp.hs-Ws     
  consensus/90%                                   thlsPsLs.hhPDGaph.sp.lILLEsFVR.s..paEpKa.tDhtKL.plptDl...sl.hlPllsGRssa.sp.hs-Ws     
  consensus/80%                                   GllsPoLPhlhPDGapl.spsLILLEsFVRssPtpFEpKahtDhpKL.pL+pDLtpsGlsLVPllDGRssY.sp.hs-Ws     
  consensus/70%                                   GllsPoLPpVhPDGa+lhGpoLILLEsFVRlNPtpFEpKaptDhpKLhsL+pDLt+sGlTLVPlVDGRusYpsphlsDWs     

                                  cov    pid  161          .         .         .         2         .         .         .         . 240 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      VERIRWLLLKLMDNVKDTGE-RIEELEYNRLISSLSSMENQNLGLESLKALREEGLDYKTKLMEAIRDGIRPNLTASECR     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      TERFRWLLIDLLRESRGAPTMEIEDQEYHRLIHSLSKTSNQSLGFENIECLKRVHLNYEERLNEQLLKDIVGEVRESKIR     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      VERVRWLLIDILKKSKFMQEINIEEQEYQRLIHSLSNTKNQSLGLENIECLKKNSLGYDERLNESLFVGVRGDIRESVIR     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      IERMRWLLIEILKASKSMLEIDIEDQEYQRLIHSLSNVKNQSLGLENLEHLKRNSLDYDERLNESLFIGLKGDIRESTVR     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      TERLRWLLIEILKGVKATSEIEIEDQEYQRLIHSLAKANNQSMGFENLEFLKRRLLSYDQLLDTSLLVGIRNDVRESKII     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      TERLRWLLIEVLKGMKTTSELEIEEQEYHRLIHSLAKTNNQSLGFENLECLKRNMLSYDQLLDSSLLVGVKNDVKESKVM     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      VFKFKNLIFRLLEYVQEN-EAMLEESEYIRLSESLKGNGSKLFDLDAFNLLKNNSGEHFENIMRLCVEGVRPDIPLSEVN     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      NDKLRDTLFSLLKYAQES-NSLFEESEYSRLCESLFMTSGRLSGVESLNVLMDNRSNHYEEVIASCHQGINNKLTAHEVK     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      NFKFRDLLFKLLEYSNQN-EKVFEESEYFRLCESLKTTIDKRSGMDSMKILKDARSTHNDEIMRMCHEGINPNMSCDDVV     
  consensus/100%                                  ..+h+.hlhplhc..p...p..hE-.EY.RL.pSL....sp..sh-shphLhp...ta.p.l.t.hh.sl.sph..p.h.     
  consensus/90%                                   ..+h+.hlhplhc..p...p..hE-.EY.RL.pSL....sp..sh-shphLhp...ta.p.l.t.hh.sl.sph..p.h.     
  consensus/80%                                   s.+hR.LLhclLc.spt..p..hE-pEY.RLhcSLttstsp..Gh-shphL+ct..sa.p.l.p.hh.Glpsplptsplh     
  consensus/70%                                   s-+hR.LLhclLchspts.Eh.lE-pEYpRLhcSLtpspspphGhEslchLKcsthsapppl.pthh.GlpsclptSclh     

                                  cov    pid  241          :         .         .         .         .         3         .         . 320 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      IGIAKVY---DQFCLLRDSGQYQNVYCRTSRSEMIEWLKDHKLTSLINGSEGTFFNNERCGFCQNHMLRVIAELVHSKRV     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      EELIKLKTWYREEIYRKGLGNF----VQTDRKSLL--------QTLVLSSAHSDSLAPECPMCCSKILDLCYQLSMRIAN     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      EELIKLRFWFKKEIFDKQLGKF----KFSQKSNLI--------NDLVSLGSHKDSDVPSCPFCANKLMDVVYSIASHPID     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      EELIKLKMWFKDEVFSKGLGKF----KLTDRRELL--------ESLSSLGAHLDSDVSSCPFCNNKLMEIVYNVTFSSVE     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      EELIKIKLWYKTEIFNKGLGKF----KRTNKSNLL--------SDLLKIGLHQDSDTINCMFCSCKILELCYTLSNKLSI     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      EELIRLKIWYKSEVYEKGLGKF----VKTDKKVLL--------SQLITLGSHEENDSLDCAFCSSRILELCFKLSVKMHE     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      SKIVENFLEFKAKL---KKGVIPPLFMMTDKERLLKEFCDLYLDQGVSSAPESKWELLRDFKEATSFTNFIYFDSKND--     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      LQIEEEYQVFRNRL---RKGEIEGQFLKVDKSQLLNELNNLYADKVVAE--DNIEHLIYQFKRASPILRFLYANVDEG--     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      FGINSLFSRFRRDL---ESGKLKRNFQKVNPEGLIKEFSELYENLADS---DDILTLSREAVESCPLMRFITAETHG---     
  consensus/100%                                  .tl.p.h...ct.h...t.G.h......sp.p.hl........p.h.....t.......p.hpts.hhphhh..s.t...     
  consensus/90%                                   .tl.p.h...ct.h...t.G.h......sp.p.hl........p.h.....t.......p.hpts.hhphhh..s.t...     
  consensus/80%                                   .tl.c.h..a+pcl...t.Gph....hhss+ptLl........pph.t...cp..p..pp.hpss.hhchhht.s.p...     
  consensus/70%                                   .plhclh.ha+pcl...thGph....hhos+ppLl........splls.u.cp..ph.ps.hpssplhchhat.s.p...     

                                  cov    pid  321          .         .         :         .         .         .         .         4 400 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      SSNYTPTND--------KEISRHKKLLSDCNKIKGLKVLNTRRHTLLCLDVIVLNSLIEMIKLK------INSSQFLINN     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      QTSLENNFD-EPPLPTTQIEKVYLSLLSACNKIKGKKVFNTRRNTLLFLDLIILNFVAHVYKTQPSEMETLKKAGLIIGE     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      EVNMKSQSD-ENSISIDAVERCYLQALSVCNKVKGLKVFNTRRNTLLFLDLVLLNLLCDLFKKHDDAIVRLRNAGIVVGQ     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      RTDGAATVDQQFSTTHTNIEKHYLSVLSLCNKIKGLKVFNTRRNTLLFLDLIMVNLMVDISESCQDAIESLRKSGLIVGQ     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      DHSKEEMKD-DEVGGKQPVCISYSSLLSICNKIKGSKIFNTRRNTLLFLDLIMLNFIVDEMIQDDSVVDSLRGAGFIIGQ     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      DVLTRGLNL-DGTKTLHSSVQSYLNVLSMCNKIKGSKIFNTRRNTLLFLDLIMLNFVVDEMVKDSTVIRNLKNAGLIVGQ     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      -EGHPEQDKAEKVGNDRHYHRKSCGMISMLNKSKSIKLMNTRRKLLLGLDVVRLSHLIS---LKNEFPRGDDDESVWCGQ     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      -N--------EKRGNQTIGECQVQCWRSFLNKVKSLRILNTRRKLLLIFDALILLA--S---KHD--LMKQKCLKGWLGS     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      ----------HERGSETS--TEYERLLSMLNKVKSLKLLNTRRRQLLNLDVLCLSSLIK---QSK--FKGLKNDKHWVGC     
  consensus/100%                                  ........................thhS.hNK.Ku.+lhNTRRp.LL.hDhlhl....p....p.......pt.thhhsp     
  consensus/90%                                   ........................thhS.hNK.Ku.+lhNTRRp.LL.hDhlhl....p....p.......pt.thhhsp     
  consensus/80%                                   ..........p..hs.p...pph.phlShhNKlKu.KlhNTRRphLLhLDllhLs.hhp....p.....t.cptthhlGp     
  consensus/70%                                   ...h......c..hs.pt..ppa.phLShhNKlKuhKlhNTRRppLLhLDllhLshlhc...ppp..h.tl+ssthhlGp     

                                  cov    pid  401          .         .         .         .         :         .         .         . 480 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      HFKSVNDRLLSVDLIINKLEKKLLKQPDWLGNVKGKLSK---------------------------RIKPYNLDYVITWL     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      MLLLPNDRVLDILVARRLLLKKVESCCNWLDRCRHLL-R---------------------------KEEPVLWDCVSEFT     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      MLMLVNDRLLDILEAIKLIRKKLMTSPKWVQMCSRTL-K---------------------------NSHQDLWSQLEKLI     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      MVMLVNDRVLDILEAIKLIRKKIGTNPNWVKNCSKIL-E---------------------------RSHPEIWLQLNTLI     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      MVVLVNDRALDILAAMKLIRHKLGNSKDWLSVCGKVL-K---------------------------RYDEEMWKEVKTYI     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      MILLVNDRVLDILTANKLIRQKLTTNEKWLSICSSVL-K---------------------------RYDLELWEKLCYLI     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      SFTTVSDRLVSVMSTQRDLKKHLFRLSRMPKNKSKG-KTKALNEIFLDYRRLILNKVFNSLNAHGLTAHSYGLEAS-DFE     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      CFLRVKDRLVSLEATKRDLEKWGERGNRLRSRITQSSQCLSKNQILNSIFQKTILKATTALKDVGISVDHYKIDM--EVI     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      CYSSVNDRLVSFHSTKEEFIRLLRNRKK--SKVFR---KVSFEELFRASISEFIAKIQKCLLVVGLSFEHYGLSEHLEQE     
  consensus/100%                                  .h..spDRhlsh..h.p.h.phh.p..p..t.h.t...p...........................p.c...h.......     
  consensus/90%                                   .h..spDRhlsh..h.p.h.phh.p..p..t.h.t...p...........................p.c...h.......     
  consensus/80%                                   hhh.VsDRllsl..s.c.l.+hl.pt.ph.p.htp...p...........................p.c..hhp...ph.     
  consensus/70%                                   hhhhVNDRllslhtsh+.lc++lhpp.chhp.spph..c...........................p.c..hhpth.phh     

                                  cov    pid  481          .         5         .         .         .         .         :         . 560 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      KELDYEFWYEFKFEREHSARYEKPTLRYKR--QSERVCYQVEFGTDKIFNEEVFLEYLDALSSLSLGMMNSMKTSSATKL     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      NVPDFELLL----SLAEELCSEKPVMHYKPPSSLIGDCAHKDLM---SMSDGEFESLFKCLSHISLSLVNSMKTSFSSRL     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      KHPDMDSMM----ILAQALVSDRPVMRYTIDRESEKICRHQPFS---SLVEGEQKKLFRILSSISLALVNSMKTSFSSRL     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      RQPDFNSLI----SIAQYLVSDRPIMRYSVERGSDKICRHKLFQ---EMSSFEQMRLFKTLSSISLSLINSMKTSFSSRL     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      KEPDFDMLF----QLAKSLVSERPIMRYTVHKDNESRCLHQNSL---NISDQSFKAMLKALSHVSLSLINSMKTSFSSRL     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      RVPDFNELF----QLAKELVSDRPMMRYSVHKAEERQCCHKAME---NFTDDDFKIMLKALSHLSLGLINSMKTSFSSRL     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      NWPSLEDFMSF------KKSGSIPVMNYERDNFR--PQMHLD-----ETSFSEDITDLRMISSLSLSLVNSMKTSSVSKI     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      CLNSYDLIMDF------DVSGVVPTISYQRTEEE--TFPYVM-----GDVELLGTTDLERLSSLSLALVNSMKTSSTVKL     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      CHIPFTEFENF------MKIGAHPIMYYTKFEDY--NF--QP-----STEQLKNIQSLRRLSSVCLALTNSMKTSSVARL     
  consensus/100%                                  p..shp.h..........h...hPhh.Yp............................hchlSplsLuhhNSMKTS.ss+l     
  consensus/90%                                   p..shp.h..........h...hPhh.Yp............................hchlSplsLuhhNSMKTS.ss+l     
  consensus/80%                                   p..shp.hh.........h.uthPhhpYph.pt....h.........thsp...ht.hchLSplSLuLhNSMKTS.ss+L     
  consensus/70%                                   p.ssap.hh........thsup+PhMpYph.ptp...pha.......phsp.p.hp.h+tLSplSLuLlNSMKTS.so+L     

                                  cov    pid  561          .         .         .         6         .         .         .         . 640 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      VINDE--KSFYGTVQCEECYFQDLD--SSYNSILLYQKTGEKSRCYGLMLNDDELSDVYRVGQSFYADPKRFFLPIMSSN     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      LVNEKDYKRYYGTVRLKECYVQRFFLRVGLYGLLFYQKTGEKSRCYSLYLSDKGN---LVELGSFYSDPKRFFLPIFSEF     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      LINEREYSRYFGNVRLRECYVQRFHLIKNTFGLLFYQKTGEKSRCYSIYLSINGV---LEEQGSFYCDPKRFFLPIFSED     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      LVNEREFSKYFGNVRLRECYAQRFYLAESLVGFLFYQKTGERSRCYSVYLSDNGV---MSEQGSFYCDPKRFFLPVFSDE     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      LINEKDYSRYYGNVRLKECYVQRFPISSRVTGYLFYQKTGERSRCYSLYISENGE---LSELGSFYCDPKRFFLPVFSED     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      LINERDYSRYFGNVRLRECYIQRFPITNNIIGLLFYQKTGERSRCYSLYIAENGE---LTEIGSFYCDPKRYFVPIFSEA     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      RQNASGKN-RYGRVSCEECFFQEIKSPKGTFT-LIYQKTGESSKCYSINR-DGEH------ICSFYADPKRYFLPIMSSE     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      RQNEFGPA-RYQVVRCKEAYCQEFSLGNTELQ-LIYQKTGECSKCYAINDNKVGE------VCSFYADPKRYFPAIFSAE     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      RQNQIGSV-RYQVVECKEVFCQVIKLDSEEYH-LLYQKTGESSRCYSIQG-PDGH------LISFYADPKRFFLPIFSDE     
  consensus/100%                                  h.Nt.....hat.VphcEsahQ.h....t..t.LhYQKTGEpS+CYul.....t.........SFYsDPKRaF.slhSt.     
  consensus/90%                                   h.Nt.....hat.VphcEsahQ.h....t..t.LhYQKTGEpS+CYul.....t.........SFYsDPKRaF.slhSt.     
  consensus/80%                                   h.Np.t.t.hatsVphcEsahQch...pt.ht.LhYQKTGEpS+CYul.h..st........tSFYsDPKRaFlPlhSpt     
  consensus/70%                                   h.N-pt.s.haGsVch+ECYhQch.l.pshhs.LhYQKTGEpSRCYSl.hscsG.......hsSFYsDPKRaFLPIFSpp     

                                  cov    pid  641          :         .         .         .         .         7         .         . 720 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      VILKTCEEMLSWLDWLT--NEETNMIRTKLFTLVINVLTVPSKRVQIYLQGFRYFIMAFVNEFHFKRLNEKLSVQALTSA     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      VLLATCAEMLSWLDFDE---KLVDAVTPLLKILVLSILSSPTKRSQTFLQGLRYFIMAYVNQAHHIQLMSKLAVECKSAS     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      VLIEMCEEMTSWLDFSH---ELMTMTRPTLRLLVLAVLCSPSKRNQTFLQGLRYFLMAYANQIHHVDLMSKLRVDCMSGS     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      VLAGMCEEMTSWLDFDT---GLMNDTGPILRLLVLAILCSPSKRNQTFLQGLRYFLMAFANQIHHIDLISKLVVECKSSS     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      TIVSMCNEMVCWLDFDE---QLVELVKPKLRSLVLLLLCSPSKRNQTFIQGLRYFIMAYANQAHHVDLMSKLEIECKSSS     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      VITSMCEEMINWLNFDS---ELVRIVSTQLKTLMLLLLCSPSKRNQTFLQGLRYFIMAYVNQAHHIDLMSKLAVECKSSS     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      VIKGVIDTMVQWLSDVKELEGCIDEIKILLKIIFMSVLLNPSKRSQKFLQNLRYFIMAFFGLAHHVDLMEKVKEDLITKS     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      VLQTTISTMISWIEDCNELEGQLNNIRSLTKMILVLILAHPSKRSQKLLQNLRYFVMAYLSDYHHKDLIDKIREELITDV     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      VLYNMIDIMISWIRSCPDLKDCLTDIEVALRTLLLLMLTNPTKRNQKQVQSVRYLVMAIVSDFSSTSLMDKLREDLITPA     
  consensus/100%                                  sl.thht.MhpWlp......t.hp.ht..hh.lhh.hL..PoKRsQh.lQshRYhlMAhhs.hp.hpL.pKl..phho.s     
  consensus/90%                                   sl.thht.MhpWlp......t.hp.ht..hh.lhh.hL..PoKRsQh.lQshRYhlMAhhs.hp.hpL.pKl..phho.s     
  consensus/80%                                   VlhthhppMhsWlp.sp...t.hp.hpshL+hlhl.lLssPoKRsQphlQslRYFlMAahsphHahpLhpKlt.-hhosu     
  consensus/70%                                   VlhshhppMlsWLc.sp...thhs.lpshL+hLll.lLssPSKRsQpaLQuLRYFlMAassphHHhcLhsKLt.-hhosu     

                                  cov    pid  721          .         .         :         .         .         .         .         8 800 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      EHHVFVLMDELVVCLLEE--ALEENMAKIFKFVLNLSYLCHFITKETPDRLTDQIKCFEKFLEPKLQFGSAFVNLDSSPS     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      DVLIQRLSVKIVDMVLSDGSDPDMHMTRKFKFVLNVSYLCHLITKETPDRLTDQIKCFEKFMEPKLEFGSLIVNPSLNGF     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      EVLIQRMAVELFQTILSEGEDADLYFARRFKYLLNVSYLCHLVTKETPDRLTDQIKCFEKFIEPKVKFDCVVVNPPLNGS     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      EVVVQRLAVGLFIRLLGGESDASSFFSRRFKYLLNVSYLCHLITKETPDRLTDQIKCFEKFIEPKVKFGCAVVNPSLNGK     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      EIQLQRLAVTLFELVLSTGDDKDFGFARRFKFLLNISYLCHFVTKETPDRLTDQIKCFEKFLEPKLNFNSVIVNPSLSGI     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      EIQLQRLCVRLFVSILSGDNEIEYGFTRRFKFLLNISYLCHFITKETPDRLTDQIKCFEKFLEPKLKFNSVIVNPSLNGT     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      EYLIYRCVRKVMILVLGD--SVETMLTSRFKFLLNLSYICHFITKETPDRVTDQIKCFEKFLEPKLKFKSVFVNPKN--D     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      EFLLYRLIRTLMNLVLSE--DVKSMMTNRFKFILNVSYMCHFITKETPDRLTDQIKCFEKFLEPKVRFGHVSTNPAD--T     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      EKVVYKLLRFLIKTIFGT--GEKVLLSAKFKFMLNVSYLCHLITKETPDRLTDQIKCFEKFFEPKSQFGFFVNPKEA--I     
  consensus/100%                                  -h.l.hh...lh..lhtt..t.p..hsthFKahLNlSYhCHhlTKETPDRlTDQIKCFEKFhEPK.pFt.h.ss......     
  consensus/90%                                   -h.l.hh...lh..lhtt..t.p..hsthFKahLNlSYhCHhlTKETPDRlTDQIKCFEKFhEPK.pFt.h.ss......     
  consensus/80%                                   Eh.l.+hhhtlh.hlLut..s.c.hhsp+FKalLNlSYlCHhlTKETPDRLTDQIKCFEKFhEPKlpFsphhsN.t....     
  consensus/70%                                   Ehhl.RLhhpLh.hlLup..shc.hhsp+FKFlLNlSYLCHhITKETPDRLTDQIKCFEKFlEPKlpFssshVNPs....     

                                  cov    pid  801          .         .         .         .         :         .         .         . 880 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      LPKEIEDKFVKDINNLFSKDLH----TNDLESPGLSKEILSLCTSCFNCGMLTVGKVLQN---DPQSPSFSSTALDISSN     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      LSKEQEDVMIEGVEKFFSKELLT---VEDLKRPGVSRELLSYCVSLFNKGRLRVNGTLGT---DPYRPSFTSTALDLSSN     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      LTLEQEDIMIRGLDRFFSKEAKT---SSDTQIPGVSKEILSFCISLFNRGRLKVTGELKS---NPYRPNITSTALDLSSN     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      LTVDQEDIMINGLKKFFSKSLRD---TEDVQTPGVCKELLNYCVSLFNRGKLKVSGELKN---NPFRPNITSTALDLSSN     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      LTEAQEEIMTSSVNRFFQKNLTN---ISDVKEPGVSKELISFCVSLFNRGKLRVSGDLKV---DPFRPSFTSTALDLSSN     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      LTESQEHQMISSIDRFFSKELLD---QSDVKEPGVSRELLGYCVSLFNRGKLRVSGDLKV---DPFRPTFTSTALDISSN     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      VTKEESSLLLESGSRFLNKDE------FDVKAPGVSKQMLSLMLSFVNSTSGFTPDELAKIKTNPLKDARCSTALDLSSN     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      ATEEELDDMVYNAKKFLSKDGCTTIEGPDYKRPGVSKKYLSLLTSSFNNGSLFKEREVKREIKDPLITSGS-AALDLASK     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      TPEEE-CVFYEQMKRFTSKEI-----DCQHTTPGVNLEAFSLMVSSFNNGTLIFKGEKKLNSLDPMTNSGCATALDLASN     
  consensus/100%                                  hs.t..p.hh.thpphhpKp........php.PGlshphhshhhS.hNps.hhh.t.ht....sP..sshs.sALDluSp     
  consensus/90%                                   hs.t..p.hh.thpphhpKp........php.PGlshphhshhhS.hNps.hhh.t.ht....sP..sshs.sALDluSp     
  consensus/80%                                   hs.pp.p.hhpshp+FhsKph.......DhptPGVs+chluhhhS.FNpGpLhhttplt....sPhpsshsuTALDluSN     
  consensus/70%                                   loc-ppchhlpshp+FhSK-hh.....pDhppPGVS+EhLShhlShFNpGpLhsss-Lp....sPhpsshoSTALDLSSN     

                                  cov    pid  881          .         9         .         .         .         .         :         . 960 
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      KSVVVPKLDEVGEIITHYDYQNLLSSVVVEMAQSFKDKLRYKLDRKSVQYAIYRRLTNMVLTKNLNEKNHINENC----E     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      KSVVIPKLNEVGEIVSEYDKQKLVSTCITSMAERFKTKGRYNLDPDTIDFLIMRNLTNLLSARKLDSSKK--EEL----S     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      KSVVIPKLDELGNILSVYDKEKLVSTCVSTMAERFKTKGRYNLDPDSMDYLILKNLTGLVSTGSRTRTNQ--EEL----S     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      KSVVIPKLDELGNILSTYDKEKLVSACVSSMAERFKTKGRYNLDPESTDYLILKNLTGLVSAGPKAKSSQ--EEL----S     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      KSVVVPKLDELGNALSKYDKQMMISSCVTTLTEMFKTKGRYNLDPDSLDFLVLKNLSNLVSVSVSKGQMK--EEL----S     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      KSVVVPKLDELGNIVDKYNKQLMVSSCVTSLVEMFKTKGRYNLDPDSIDFLVLKNLTNLVSANVPQEKSQ--EEL----S     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      KSVVIPKTDDKGNSV-DYDYDKLVGVSLCDIVEKFHNKTKFCLSPEQLEYKILKSISHTMAEENRKEKKKKTTTRDSQTS     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      KSVVVNKYTDGSRIL-NYDFNKLTALAVSQLTEVFSRKGKYLLNKQDYEYKVQQAMSNLVLGSGQLKSDADGAD------     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      KSVVVNKHLNGERLL-EYDFNKLLVSAVSQITESFVRKQKYKLSHSDYEYKVSKLVSRLVIGSKGEETGRSEDN------     
  consensus/100%                                  KSVVlsKh.phtp.l..Yshp.hhs.slsphsp.F.pK.+a.Ls.pphpahl.p.hothh..t...tp.t..tp......     
  consensus/90%                                   KSVVlsKh.phtp.l..Yshp.hhs.slsphsp.F.pK.+a.Ls.pphpahl.p.hothh..t...tp.t..tp......     
  consensus/80%                                   KSVVlsKhs-huphl.pYDhphhlusslsphsE.FppKt+YpLs.psh-ahl.+tlothl.st..tpptp..pp......     
  consensus/70%                                   KSVVlPKhs-hGpll.pYDhppLlussVophsEhF+sKs+YpLs.csh-ahlh+slosLV.sps.pcppp..-ph....p     

                                  cov    pid  961          .         .         .         0         .         .         .         . 1040
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      DFEEFLDE-----------DTCRLISDIESNVLECLSNMATPPVRKV-IKG--QEITQRYEGPDLLGRLWSR---ELMGP     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      LLYEHLSE-----------DVMKAFEEIKYEVEITLSKMRLSRELEC-G----------HKKPCTLEGVWAPF--NVLKV     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      MMYESLTE-----------DQVRAFEGIRNDVQMTLAKMANSEGSKV-ETTKLKSKNLSVDERESLESLWAPF--GVLRE     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      LMYETLTE-----------EQVESFNEIKYDVQVALAKMADNSVNTR-IKNLGRADNSVKNGNNPLDNLWSPF--GVMKE     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      LLYDTLSE-----------EQLESFEQIKQDVQLTLSRMKESKCNNV-GLGNSRKVNKHLSKSELLETLWSPY--QVLRA     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      TLYEALTE-----------DQISAFEQVRDEVQLALHKMKSSDAREE-RLQDPKRNEKNASKGKILESLWSPH--QVNRA     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      VSESIDLEESEDSVPLEELLPSESLSKIRCSIDKIFSKYQHKQNPKKVQDTEGISVS---EALRD---LVANH--RDRNL     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      L-DEILLDGG---------A-SDYFDQLKETVEKIVDQYREPVKLGSGPNGDGQP------SINDLDEIVSNK--FYIRL     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      L-AEICFDGE---------EETSFFKSLEEKVNTTIARYRRGRRANDKGDGEKLTNT---KGLHHLQLILTGKMAHLRKV     
  consensus/100%                                  ...p...-..............p.hptlc.pl..hhtpht.....t...............t.p....lhs.......t.     
  consensus/90%                                   ...p...-..............p.hptlc.pl..hhtpht.....t...............t.p....lhs.......t.     
  consensus/80%                                   h..-hh.-...........t..p.hpplc.pVphhlsphtps...p....t.........pt.p.Lt.lhush..thhp.     
  consensus/70%                                   h..EhL.E...........-.hc.Fppl+ppVphslu+htpspt.p....s...t.p...pt.p.Lptlhush..tlh+.     

                                  cov    pid 1041          :         .         .         .         .         1         .         . 1120
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      ILAETSLHEVKDFDPSIFSFETYQELCELIFNSE-LKEQFFLDDVLRFCPLELLVKNLTTKNFIEKDFFECFKYILISAG     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      IRSETSVHEIRDFDPDLLGEDVYEKLCVAVYDSP-LRPTFFLEKPLDICPLELLLKNLTTKSYEDDEFFDCFKYILIQAG     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      IKAEVSMHEVKDFDPDVFRSDVYKELCDAVYLSP-FKLTYFLEAPQDICPLGLLLKNLTTIAYQEDEFFECFKYLLIQGH     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      IRAEVSLHEVKDFDPDVLPSDVYKELCDAVYKSS-EKCNFFLEEVLDVCPLGLLLKNLTTSSYMEEEYFMCFKYLLIQGH     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      IKNEVSIHEIKDFDPDIIEHETVKKLCDEVYQSS-NKLEFFLEEPLKSVPLEFLLKNLTTIAYEETDYLECFKYLLIQGG     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      IKNETSIHEIKDFDPDILDSHLVEKLCHEVYNSS-QKSLFFLDEPLKSVPLEMLLINLTTIAYEEEEFFECFKYLLIQGD     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      ILSEVSYHLVEDFEESLFPDSFYEDFCERVGNSPKYSKLVMTETVLESCPIEMFTKNITRKFYEEGDWFKCFKTILLQLN     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      IKGELSNHMVEEFDHDILPGKFYEEFCNAVYENSRLKQKYFYCGHMSQCPIGELTKAVSTRTYFNHEYFQCFKSILLIMN     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      ILSEISFHLVEDFDPSCLTNDDMKFICEAVEGSTELSPLYFTSVIKDQCGLDEMAKNLCRKFFSENDWFSCMKMILLQMN     
  consensus/100%                                  IhsEhS.H.lc-F-.shh..p.hp.hC..l..s...p..hhhp...p.sslt.hhhslsp..a.pt-ah.ChK.lLl.ht     
  consensus/90%                                   IhsEhS.H.lc-F-.shh..p.hp.hC..l..s...p..hhhp...p.sslt.hhhslsp..a.pt-ah.ChK.lLl.ht     
  consensus/80%                                   IhsEhShH.lcDFD.slh.tchhcchCptVhtSs..p..aFhpt.hc.sPlt.hhKNloph.a.-p-aFpCFKhlLlpht     
  consensus/70%                                   IhuEsShH.lcDFDPslhspchhcclCctVapSs..+..aFh-tshc.CPLthLhKNLTThsY.Ep-aFpCFKhlLlQhs     

                                  cov    pid 1121          .         .         :         .         .         .         .         2 1200
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      FDNRVGRYDHRSRSRLGFKDAAYHVKEKSRISLRESNSEAVSKRLDKSFFTNSSLRNLCFYSEESPTFQSTVSSSTGKLK     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      FDQRLGAYEHKNRSRLGLSEEAFRLKEDVRVSNRQSNSEAIADRLDKSFFTSAALRNLCFYSEESPTEYTCISPNVGNLK     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      YDQKLGSYEHRSRSRLGFSSEVLKLKDEVRLSTRESNSEAIADKLDKSYFTNAALRNLCFYSDDSPTEFTSISSNTGNLK     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      FDQKLGSYEHKSRSRLGFTDETLRLKDEVRLSIRESNSEAIADKLDKSYFTNAALRNLCFYSEDSPTEFTSISSNSGNLK     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      FDQKLGSYEHKSRSRLGLSSEALRVQEDARVSTRESNAEAIAKKLDKTFFTSAALRNLCFYSEDSPTEFTSVSTNTGNLK     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      FDQKLGTYEHKSRSRLGLSSEALKVQENARVSTRESNAEAIAKKLDRTFFTSAALRNLCFYSEDSPTEFTSVSTNTGNLK     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      VNHYSGRFKHNSRLRLNYKFDYKKLYEDARISERESNSEAMCKLLSFTKCITSTLKNLCFYSDESPTSYNGAGPDTGRLQ     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      ANTLMGRYTHYKSRNLNFKFDMGKLSDDVRISERESNSEALSKALSLTNCTTAMLKNLCFYSQESPQSYDSVGPDTGRLK     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      ANAYSGKYRHMQRQGLNFKFDWDKLEEDVRISERESNSESLSKALSLTKCMSAALKNLCFYSEESPTSYTSVGPDSGRLK     
  consensus/100%                                  hsth.GtapH.pp.tLshp.th.+l.-psRlS.RpSNuEuhschLsho.hhsu.L+NLCFYSp-SPp..sshusssGpLp     
  consensus/90%                                   hsth.GtapH.pp.tLshp.th.+l.-psRlS.RpSNuEuhschLsho.hhsu.L+NLCFYSp-SPp..sshusssGpLp     
  consensus/80%                                   hsph.GpYcHhpRppLshp.-hh+lp-csRlS.RESNuEAluctLshohhhsusL+NLCFYS--SPTpasslussoGpLK     
  consensus/70%                                   hsphhGpYcHpsRpRLshp.-hh+lp--sRlSpRESNSEAluctLshohhTsAuL+NLCFYS--SPTpaoolussoGpLK     

                                  cov    pid 1201          .         .         .         .         :         .         .         . 1280
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      FGLSYKEQVGSNRELYVGDLNTKLTSRLIEDYFESITSESKFSCLNNDSEFEKAILDMKSVVRLSGLAVSLDHSKWGPYM     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      FGLSYKEQVGSNRELYVGDLNTKMMTRLVEDFTEAVANSMNYTCLNSEKEFERAICDMKMAVNNGDLCCSLDHSKWGPFM     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      FGLSYKEQVGSNRELYVGDLNTKLMTRLVEDFSEAVGSSMRYTCLNSEKEFERAICDMKMAVNNGDLSCSYDHSKWGPTM     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      FGLSYKEQVGSNRELYVGDLNTKLMTRLVEDFSEAVGNSMKYTCLNSEKEFERAICDMKMAVNNGDLSCSYDHSKWGPTM     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      FGLSYKEQVGSNRELYVGDLNTKLMTRLVEDFSEMITSSMRYSCLNSEKEFERAICDMKMAVNNGDISMSLDHSKWGPHM     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      FGLSYKEQVGSNRELYVGDLNTKLMTRLVEDFSEVVTGSMRFSCLNSEKEFERAICDMKMAVNNGDFSLSMDHSKWGPHM     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      FSLSYKEQVGGNRELYIGDMKTKMYTRFVEDFFESLTGQLNGSCLNDEAQFEEAISEMKQCIREGNLSYNMDHSKWGPTM     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      FSLSYKEQVGGNRELYIGDLRTKMFTRLIEDYFEAISLQLSGSCLNNEKEFENAILSMKLNVSLAHVSYSMDHSKWGPMM     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      FALSYKEQVGGNRELYIGDLRTKMFTRLIEDYFESFSSFFSGSCLNNDKEFENAILSMTINVREGFLNYSMDHSKWGPMM     
  consensus/100%                                  FuLSYKEQVGuNRELYlGDhpTKhhoRhlEDa.E.hs...phoCLNs-tpFEpAI.pMp.slp.u.hshshDHSKWGPhM     
  consensus/90%                                   FuLSYKEQVGuNRELYlGDhpTKhhoRhlEDa.E.hs...phoCLNs-tpFEpAI.pMp.slp.u.hshshDHSKWGPhM     
  consensus/80%                                   FuLSYKEQVGuNRELYlGDLpTKhhTRLlEDa.EslssphphoCLNs-pEFEpAIhsMK.sVp.utlshShDHSKWGPhM     
  consensus/70%                                   FuLSYKEQVGuNRELYlGDLpTKhhTRLlEDa.EulssphphoCLNsEKEFEcAIh-MKhsVppGsluhShDHSKWGPhM     

                                  cov    pid 1281          .         3         .         .         .         .         :         . 1360
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      SPAIFNSLFTSLDLQL-R-DGSLIDKSPIENLLNWHLHKLVEVPYNVIEAYLKGYTKRGLGLMDKMSSTVCEDFIFNWF-     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      SPALFHAFFGALKFKISK-TGEQVDLGPVLNVLKWHLHKAVEVPISVAEAYCTGMLKRRLGLMSLSCQSVCEEFFHQKLL     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      SPALFLSFLYTLELKNPR-DRTKVNLEPVMNILKWHLHKVVEVPINVAEAYCVGKLKRSLGLMGCDCTSVGEEFFHQYLQ     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      SPALFLALLQMLELRTPV-DRSKIDLDSVKSILKWHLHKVVEVPINVAEAYCIGKLKRSLGLMGCGSTSLSEEFFHQTMQ     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      SPALFYSFLANLNLTEPK-SRAKLNLGPLLDILKWHLHKVVEVPFNVAQAYCVGKIKRSLGLMECQTSSVTEQFYHNFLQ     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      SPALFFTFLANLNLTEPK-SRTRLNLDPLLNILKWHLHKTVEVPFNVAQAYCIGKLKRSLGLMECQCSSLTEEFYHSYLQ     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      CPLLFLTVLKNIKYIKD----FDKPIEHISTLLSWHVHKYVEVPFNVINAITKSFVKRQLGIQQGVINTKTEEFIFSHL-     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      CPFLFLTVLQNLIFLSKDLQADIKGRDYLSTLLMWHMHKMVEIPFNVVTAMMKSFIKAQLGLRKKTKQSITEDFFYSNF-     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      CPFLFLMFLQNLKLGDD--QYVRSGKDHVSTLLTWHMHKLVEVPFPVVNAMMKSYVKSKLKLLRGSETTVTERIFRQYF-     
  consensus/100%                                  sPhlF..hh..l.h..........sht.l.slL.WHhHKhVElPhsVhpAhhhuhhKttLtl.th..pohsEphhhp.h.     
  consensus/90%                                   sPhlF..hh..l.h..........sht.l.slL.WHhHKhVElPhsVhpAhhhuhhKttLtl.th..pohsEphhhp.h.     
  consensus/80%                                   sPhLFhshhtsLphh....ph..hsht.l.slLpWHhHKhVEVPhsVhpAhhhuhlKppLGLhtt.ppolsEcFhaphh.     
  consensus/70%                                   sPhLFhshLtsLphtps..ptsphshs.l.slLpWHlHKhVEVPhNVspAhhhuhlKRpLGLhpttpsolsE-Faaphh.     

                                  cov    pid 1361          .         .         .         4         .         .         .         . 1440
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      AKGQVPSHISSVLDMGQGILHNTSDYYGLVTEQFIMLCLELCFDVRMTAYTSSDDEIMLSNSHSLKDKSDESLDIQKCGE     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      LEEGVPSHIMSVLDMGQGILHNSSDLYGLITEQFINYCLDFLFDVIPVSYTSSDDQITTFKLPTMSS-SEDGLDGFDWLE     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      SRDQVPSHIMSVLDMGQGILHNTSDLYGLITEQFLCYALDLLYDVIPVTYTSSDDQVSLIKIPCLSD--EKCQDRTELLE     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      LSGQIPSHIMSVLDMGQGILHNTSDLYGLITEQFLCYALDLLYDVIPVSYTSSDDQITLVKTPSLDI--EGGSDAAEWLE     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      RENEIPSHIMSVLDMGQGILHNLSDLYALITEQFLNYAIYKLYDVDVLSYTSSDDQISIMKLPAYEH--I-DEDSPDWLE     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      IQDEIPSHIMSVLDMGQGILHNLSDLYALITEQFLNYVIHKLFDIDVTSYTSSDDQISIMKLPLSTK--E-NDEDFDWLE     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      DHGIVPSHISSILDMGQGILHNASDYYGLITEKFINYTLKLLFRGELKSFTSSDDQISLFDKELSAT---LRDDTEELLC     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      QAGVVPSHISSILDMGQGILHNTSDFYALISERFINYAISCICGGTIDAYTSSDDQISLFDQSLTEL---LQRDPEEFRT     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      EMGIVPSHISSLIDMGQGILHNASDFYGLLSERFINYCIGVIFGERPEAYTSSDDQITLFDRRLSDL---VVSDPEEVLV     
  consensus/100%                                  ..t.lPSHI.SllDMGQGILHN.SDhYuLloEpFl.hsl.hhht....saTSSDDpl.h.p....t.......-..chh.     
  consensus/90%                                   ..t.lPSHI.SllDMGQGILHN.SDhYuLloEpFl.hsl.hhht....saTSSDDpl.h.p....t.......-..chh.     
  consensus/80%                                   .ts.lPSHI.SlLDMGQGILHNhSDhYuLloEpFlsYslthlash...uYTSSDDQIolhc....p.....t.D..-hhp     
  consensus/70%                                   .ps.lPSHI.SlLDMGQGILHNsSDhYuLITEpFlsYslphlacs..huYTSSDDQIolhch.h.p.....spDs.-hLp     

                                  cov    pid 1441          :         .         .         .         .         5         .         . 1520
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      LLEFHYYLSSKLNKFVSPKTVAGSFASEFKSRFFIWSQEVPLLTKFVAAALHNVKAKSPHQLAETVDTILDQCVANGVSI     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      LLCFHDFLSSKFNKFVSPKSVSGTFVAEFKSRFFVMGEETPLLTKFVSAALHNVKCKTPTQLAETIDTICDQCVANGVGI     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      MVCFHEFLSSKLNKFISPKSVIGTFVAEFKSRFFVMGEETPLLTKFVSAALHNVKCKTPTQLSETIDTICDQCIANGVST     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      MICFHEFLSSKLNKFVSPKSVIGTFVAEFKSRFFVMGEETPLLTKFVSAALHNVKCKTPTQLSETIDTICDQCIANGVST     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      IVCFHEYLSSKLNKFVSPKSVVGNFVAEFKSRFFVMGEETPLLTKFVAAALHNVRCKTPTQLAETVDTICDQCVANGVSV     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      IICFHEYLSSKLNKFVSPKSVVGNFVAEFKSRFFVMGEETPLLTKFVAAALHNVKCKTPTQLAETIDTICDQCVANGVGV     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      FLNYHYYLSSQLNKFVSPKSSLCEFVAEFKSRFFVWGEEVPLLTKFVAASLHNVKCKTPHQLSETVDTIVDQCAANGVPI     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      LIEFHYYMSDQLNKFVSPKSVIGRFVAEFKSRFFVWGDEVPLLTKFVAAALHNIKCKEPHQLAETIDTIIDQSVANGVPV     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      LLEFQSHLSGLLNKFISPKSVAGRFAAEFKSRFYVWGEEVPLLTKFVSAALHNVKCKEPHQLCETIDTIADQAIANGVPV     
  consensus/100%                                  hlpap.ahSs.hNKFlSPKos.spFsuEFKSRFalhupEsPLLTKFVuAuLHNl+sKpPpQLsETlDTIhDQshANGVsh     
  consensus/90%                                   hlpap.ahSs.hNKFlSPKos.spFsuEFKSRFalhupEsPLLTKFVuAuLHNl+sKpPpQLsETlDTIhDQshANGVsh     
  consensus/80%                                   hlpFH.aLSupLNKFlSPKSVhGpFsAEFKSRFFVhG-EsPLLTKFVuAALHNVKCKpPpQLuETlDTIhDQslANGVsh     
  consensus/70%                                   hlpFH.aLSSpLNKFVSPKSVhGpFVAEFKSRFFVhGEEsPLLTKFVuAALHNVKCKoPpQLuETlDTIsDQClANGVsl     

                                  cov    pid 1521          .         .         :         .         .         .         .         6 1600
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      KIIKEISKRTNRLISYSGHPIDPFLCVVETDLKDWVDGSRGYRLQRSIESIIADDKQLSIIRNSCKKLFYKIRSGDIQEE     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      EIVTKISERVNRLIRYSGYPQTPFLAVEKQDVKDWTDGSRGYRLQRNIEHYLQGSEQLEFVRKCAKKVLLKIKKGQVFEE     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      HIVSKISIRVNQLIRYSGYRETPFGAIEEQDVKDWVDGSRGYRLQRKIEAIFSDDKETMFIRNCARKVFNDIKKGKIFEE     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      KIVARISKRVNQLIRYSGYGDTPFGAIEDQDVKDWVDGSRGYRLQRKIEAIFYDDKETSFIRNCARKVFNDIKRGRIFEE     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      SIVSKISERVNRLVKYSGFGETPFLSVVKQDVKDWSDGSRGYRLQRNIENSLRDSKILEVMRKGARKVFLGIKNGRIFEE     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      DIVSRISERVNRLISYSGYKETPFLTIVNQDVKDWTDGSRGYRLQRNIENSFGNQELLRLIRRGARKVFLEIKKGHVFEE     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      NICNLLQKRCINLLRYCRFPINPFLLNVNTDIKDWIDGTRGYRIQRQLENLFPDS--TGTVRKLVRRLYNSLKNDEVRED     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      HLCNLIQKRTLNPLQYARYPIDPFLLNCETDVRDWVDGNRSYRIMRQIEGLIPNA--CSKIRSMLRKLYNRLKTGQLHEE     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      SLVNSIQRRTLDLLKYANFPLDPFLLNTNTDVKDWLDGSRGYRIQRLIEELCPNE--TKVVRKLVRKLHHKLKNGEFNEE     
  consensus/100%                                  plht.lp.Rs.p.lpYsta..sPFh...ppDl+DW.DGsRuYRl.R.lEt.h.st..h.hhRp.h++lh.tl+psph.E-     
  consensus/90%                                   plht.lp.Rs.p.lpYsta..sPFh...ppDl+DW.DGsRuYRl.R.lEt.h.st..h.hhRp.h++lh.tl+psph.E-     
  consensus/80%                                   plss.IpcRs.pLlpYuta..sPFhh..ppDlKDWhDGoRGYRlQRpIEt.h.sp..hthlRphs+Kla.plKpGpl.EE     
  consensus/70%                                   pIlspIpcRs.pLlpYusas.sPFLh..ppDVKDWsDGSRGYRlQRpIEshh.ss..hphlRphsRKla.clKpGclhEE     

                                  cov    pid 1601          .         .         .         .         :         .         .         . 1680
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      YLVNALQSSPDDCLRQMLRITEVDDQTIEKLIEIRWLNLRAFGDLRLVLRTKIM-SGTRILDREEVPSLIRSVQSKLSKN     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      YLVQLIGKDGDDALKGFLSYAGCESDEIKDVLKYRWLNLSANGDLRLVLRTKLM-STRRVLEREQIPTLIKTLQSKLSKN     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      NLINLISRGGDEALSGFLQYAGCSEDEIRRTLDYRWVNLASFGDLRLVLRTKLM-TSRRVLEKEEMPTLIKTIQSRLSRN     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      NLINLIGRGGDEALTGFLQYAGCSEQEVNRVLNYRWVNLSSFGDLRLVLRTKLM-TSRRVLEREEVPTLIKTLQSKLSRN     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      NLIGLIGRGGDEALRGFLLYAEVDKDEIENALRYRWVNTSTFGDLRLVLRTKIM-SSKRVLERESIPSLVKTLQSRMSKN     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      NLIGLIGRGGDEALRGFLLYAGFAENDIVEALRHKWLNPSTFGDLRLVLRTKIM-SSKRILERESVPSLIKTLQSRMSKN     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      FLAELFSRDPFTVLKSLFKHYDLDEP-Q---LRDCWLNLEAHHPIRMVLRQKVLFPSALQIESVNLPTVIRVLQNKLSHS     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      FTTNYLSSEHLSSLRNLCELLDVEPP-SESDLEYSWLNLAAHHPLRMVLRQKIIYSGAVNLDDEKIPTIVKTIQNKLSST     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      FFLDLFNRDKTEAILQLGDLLGLEED-LNQLADVNWLNLNEMFPLRMVLRQKVVYPSVMTFQEERIPSLIKTLQNKLCSK     
  consensus/100%                                  .hhthhtpt..psl.thh.hhtht.......hp.pWlN.tt.hslRhVLRpKlh.sshh.hpp.phPoll+slQs+hspp     
  consensus/90%                                   .hhthhtpt..psl.thh.hhtht.......hp.pWlN.tt.hslRhVLRpKlh.sshh.hpp.phPoll+slQs+hspp     
  consensus/80%                                   .hhthhsps..psLpthh.hhthpp....p.lchpWlNhtshtsLRhVLRpKlh.suth.l-cEplPoll+olQs+hSps     
  consensus/70%                                   .LlsLlu+sss-uLpshhphhshpcs.lpphLchpWlNLssatsLRhVLRpKlh.oothhL-cEplPoLIKTlQs+LS+s     

                                  cov    pid 1681          .         7         .         .         .         .         :         . 1760
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      FVRGAKKIVTDAINKSAFQSSVCSGFIGVCKSMGSKCVRDGSGGFVYIKSLLSEVVCHHTCETC-KPRFSVYCKS-----     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      FTKGVKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGSGGFMYIREVLNKQRVC-PCEICAQNPGIIFCSD-----     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      FTKGVKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGKGGFLYIKDIFTRIMPC-LCEICEKKPKVIYCQK-----     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      FTKGVKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGKGGFLYIKEVYSGINVC-ICEICALKPKIIYCND-----     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      FTKGAKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGSGGFIYLKDIYKKITTC-ECKHCSVWRGVVYCEK-----     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      FIKGAKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGKGGFMYLKELYNNVNKC-GCCICLEWPGVVYCQD-----     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      FTKSTQKLLSDSVNKSAFQSSVASGFIGLAKTIGSKCVRDADRNCHYIVEILSKLESLPGLKVIMKDDIL---IVELESE     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      FTRGAQKLLSEAINKSAFQSSIASGFVGLCRTLGSKCVRGPNKENLYIKSIQSLISDVKGIKLLTNSNGIQYWQVPLELR     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      FTRGAQKLLSEAINKSAFQSCISSGFIGLCKTLGSRCVRNKNRENLYIKKLLEDLTTDDHVTRVCNRDGITLYICDKQSH     
  consensus/100%                                  Fh+uspKlls-ulNKSAFQSslsSGFlGhs+ohGS+CVRs.ptt.hYlhpl.p.......hphh....h...........     
  consensus/90%                                   Fh+uspKlls-ulNKSAFQSslsSGFlGhs+ohGS+CVRs.ptt.hYlhpl.p.......hphh....h...........     
  consensus/80%                                   Fs+GspKlLu-uINKSAFQSSluSGFIGhCKohGSKCVRssptt.hYl+plhptl.sh..hphh....hl.hh.......     
  consensus/70%                                   FT+GspKlLuEuINKSAFQSSVASGFIGhCKohGSKCVRDuptshhYIKclhsplpss.hschs.p.stlhahps.....     

                                  cov    pid 1761          .         .         .         8         .         .         .         . 1840
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      ----------ALERISKYSRSLLWDYFSLVFTNACELGNWVFSCVETPK-----KIPSVVNPNFFWCVKPGSHTELEDKV     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      ----------ALTLIPEFSRSILWDYFSLVLTNACELGEWVFSSVQPPK-----VPILLNNPNLFWAVKPRGTRLIEDQL     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      ----------SLQEVNQFSKPILWDYFSLVLTNACELGEWVFSAVKSPQ-----APLVLCNKNFFWAVKPKAVRQIEDQL     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      ----------SLNKVSQFSKPILWDYFSLVLTNACELGEWVFSTVKEPQ-----KPLVLNNQNFFWAVKPKVVRQIEDQL     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      ----------SVEKIFQFTRSIMWDYFTLVLTNACELGEWVFSSVKLPT-----KATILDNPNLFWAIKPRTHKHIEDRL     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      ----------SLAKISQFARSILWDYFTLVLTNACEIGEWVFSDVKSPS-----APPILSNPNLFWAVKPKIQKHIEDRL     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      DGSIQSDWPPECEWLRPMIRPILIDYLCIVLSNCLELGTWVLGDPEPPQ----RGPFLGRSSHDYVAVFPVKSAVLEDKV     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      N-------GSGGESVVSYFRPLLWDYMCISLSTAIELGAWVLGEPKTVK----VFDFFKHNPCDYFPLKPTASKLLEDRV     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      --------PEAHRDHICLLRPLLWDYICISLSNSFELGVWVLAEPTKGKNNSENLTLKHLNPCDYVARKPESSRLLEDKV     
  consensus/100%                                  ..........tht.h..h.+slhhDYhslshosshElG.WVhutsp.sp.....h...h.s.p.ahshhP...t.lEDpl     
  consensus/90%                                   ..........tht.h..h.+slhhDYhslshosshElG.WVhutsp.sp.....h...h.s.p.ahshhP...t.lEDpl     
  consensus/80%                                   ..........uhp.l.ph.+slLWDYhslsLoNuhELGtWVhupsp.sp.....hs.hh.N.s.ahslKPt..p.lEDpl     
  consensus/70%                                   ..........uhppl.pa.RslLWDYhslVLoNAhELGpWVhussc.Pp.....hshhhpNss.aaAlKPpsp+.lEDpl     

                                  cov    pid 1841          :         .         .         .         .         9         .         . 1920
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      NMNHVLYSIKRNFPDLFDEHIAPFLSDLSSLKISWVQRIRFLDLCVAMDMSSECLGVISHIMRRKREESYIVKQNELSLA     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      GLGHVLQSVRRSYPKVFEEHLVPFMNDLQVSRTTDFTRLRYLDVCVALDMMNENLGIVSHLLKAKDNSIYIVKQSECAVA     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      GMNHVLHSIRRNYPKLFEEHLAPFMNDLQVNRSLDSGRLKFLDVCVALDMMNENLGIISHLLKVRDNNVYIVKQSDCASA     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      GMNHVLQSIRRNYPVLFDEHLAPFMNDLQVSRTMDSGRLKFLDVCIALDMMNENLGIISHLLKTRDNSVYIVKQSDCALA     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      GLNHILHSIKKNYPQLFEEHLAPFMSDLQSNQMINPSKIKFLDICVALDMVNENLGIIGHLLRGRNNTIYIVKQSECAGA     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      SLNHILHSIKRNYPYLFEEHLAPFMSDLQFNQMMNPSHVKFLDVCIALDMMNENLGIIGHLLRGRNHFIYIVKQSECASA     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      GYNHILQSVRRLYPSLFETHLLPFLDDNSLRKSSWAPKIRFLDLCVSLDITCEAISLISHVVKWKRSEQYTVLTLDLSNS     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      GLNHIIHSLRRLYPSVFEKHILPFMSDLASTKMKWSPRIKFLDLCVALDVNCEALSLVSHIVKWKREEHYIVLSSELRLS     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      NLNQVIQSVRRLYPKIFEDQLLPFMSDMSSKNMRWSPRIKFLDLCVLIDINSESLSLISHVVKWKRDEHYTVLFSDLANS     
  consensus/100%                                  shspll.Sl++.aP.lF-pplhPFhsD.t..p.....+l+aLDlCl.hDh.sEslulluHlh+h+pp..YhVh..-ht.u     
  consensus/90%                                   shspll.Sl++.aP.lF-pplhPFhsD.t..p.....+l+aLDlCl.hDh.sEslulluHlh+h+pp..YhVh..-ht.u     
  consensus/80%                                   shNHllpSl+R.YP.lF-cHlhPFhsDhp.pp...ss+l+FLDlClulDh.sEsLulluHll+h+ppp.YhVhps-hu.u     
  consensus/70%                                   uhNHlLpSl+R.YPplFE-HLhPFMsDLpspphh.ss+l+FLDlCVALDh.sEsLulISHll+h+cpphYIVhpS-hu.u     

                                  cov    pid 1921          .         .         :         .         .         .         .         0 2000
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      HMRDSTPLEGGFQLNSLEICRNFLYQIVFESMLHPVLLTTSQFKKYFWYGEVELLPN-DADHDLGQLTQFIMDCKTLNVS     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      HIRQVEYVNQELGLSPQQICSNFKIQLVFSSMINPLVITTSVLKSFFWFNEVLNLED-ESQIDVGELTDFTILIKKYNLN     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      HVRQSEYTNWEVGISPQQVCRNFMVQVVLSSMINPLVMSTSCLKSFFWFNEVLDLED-DSQVDLAELTDFTLSIKNNKVS     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      HIRQSSYTDWELGLSPQQICTNFKTQLVLSSMVNPLVLSTSCLKSFFWFNEVLELED-DSQIELAELTDFALMVKNQNVS     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      HVRQADYVDQDLGLSPQQICYNFKVQFLLSSMINPLIVSTSTLRSFFWFNEVLSIEE-DDQIELGELTDFTLSIKTYNLE     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      HIRQSDYVDHELGLSPQQVCYNFKVQFLFSSMIDPLIVSTSTLKTFFWFNEVLSIEE-EDQIDLGELTDFTLFIKTGHLN     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      HNRKFTTMIDSKVISTSDTCINFLKQLFFESLIRPVLLSSRTLGSFTWFPHASMMPKGEGAPSLGPFENFVLKTIHKGQE     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      HSRTHEPMVEERVVSTSDAVDNFMRQIYFESYVRPFVATTRTLGSFTWFPHKTSVPEGEGLHRMGPFSSFVEKVIHKGVE     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      HQRSDSSLVDEFVVSTRDVCKNFLKQVYFESFVREFVATTRTLGNFSWFPHKEMMPSEDGAEALGPFQSFVSKVVNKNVE     
  consensus/100%                                  H.Rp.p.h..th.lss.phs.NFhhQhhhpShlp.hlhoop.htpa.Wasch..h.p.-s..thu.hppFh..hhp.t.p     
  consensus/90%                                   H.Rp.p.h..th.lss.phs.NFhhQhhhpShlp.hlhoop.htpa.Wasch..h.p.-s..thu.hppFh..hhp.t.p     
  consensus/80%                                   H.Rp.p.h..phslSspphC.NFhhQhhhpShlpPhlhoTpsLtsFhWFsch..h.p.-st.plu.hpsFs..hhp.tlp     
  consensus/70%                                   H.Rpsp.hst-hslSspplChNFhhQlhhpShlpPllhoTpsLtoFhWFscs..l.c.-uthcLG.hosFsh.lhphslp     

                                  cov    pid 2001          .         .         .         .         :         .         .         . 2080
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      RCMSLDDLDVGYVHSKITLSDVFINLSSFIHLLDWGNLCDYESFDKIILESGLEQVPIEIGIVVSHVRRSFKFKYDRKTN     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      RAMMLDDLTMGYVVSTISEPTIHLVSLKRNSNSIVGEQN----SEMLHGEQVEDMYSIVLHIQLEHKRHSTKYHLSRTVV     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      RAMFVEDIAMGYVVSSFDNIKVFLESVSVDNISLLPQEDMIDLHTVLRNVACQEAVKLKLIIQVEHTRVSTKFKLRRKMV     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      RAMFVEDIAMGYVVSNFEGVRISLSNVMVDGVQLPPKEKAPDVGVLFGLK--AENVIVGLVVQIDHVRMSTKFKLRRKMV     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      RAMTLDDMTMGYVCSTLLDEVVSLESLDSCQDLAALQFKRQDLSDFFRD-LGEDFVKVGLNIQIVHQRRSTKFDISRKVV     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      RAMTADDITMGYVCSNLAEEIITLNSYGSFQEFRSNHPSKNDLSDILKT-LTSESIKLTLDIQIVHMRNSTKYNISRKIV     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      RPMYRDDLSSGFSWIDLKDFKAYISSAHQRISRVSS---ADAGRDCFNL-----DERVVITITHNFIKRNRNGACDSKFS     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      RPMFKHDLMMGYAWIDFDIEPARFNQNQLIASGLVDPK-FDSLEDFFDAVASLPPGSAKLSQTVRFRVKSQDASFKESFA     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      RPMFRNDLQFGFGWFSYRMGDVVCNAAMLIRQGLTNPKAFKSLKDLWDYMLNYTKGVLEFSISVDFTHNQNNTDCLRKFS     
  consensus/100%                                  RsM.hpDh..Gash.ph....h.h.....................hh..........h.h...h.a.h.p.phth.pphs     
  consensus/90%                                   RsM.hpDh..Gash.ph....h.h.....................hh..........h.h...h.a.h.p.phth.pphs     
  consensus/80%                                   RsMhhcDlthGash.sht...h.hpt....t..h.s.....t.tshht.......h.l.l.lpl.ah+.spphphpcphs     
  consensus/70%                                   RsMhh-DlshGYsh.shp...lhlssht..t..hss..th.shp-hhph..s.p.h.ltlsIplpah+pSpchphpRKhs     

                                  cov    pid 2081          .         1         .         .         .         .         :         . 2160
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      YHIKCKIIIRKSELIMSKVNGVDILEIEVSEIECFVSGSQGHHISLDGVGLIPLHPLFSGKELI-DFNKLLADQSIEFKQ     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      YSYTVECETNITDIEK------EPSLATVKNVVLRASGSIEGHQFLDGVNLVASQPIFTGKKVI-NLSELLADSEITETY     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      YSYTIVSSLRVDDVST------PELELNVDAMSQCVSGSEGNHSLLDGALVIASLPLFTGHESF-DLAGLFIDAGYAVTN     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      YSFSLECTMDVGDIQN------KEVILKVVAVDQSVSGSGGNHMLLDGVPVIASLPLFTGQASF-DLAAMLIESNLAGSN     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      YTFRILLLINLSEHLR------EEVKIPVQSLSLYASGAGNNHLFLDGVSMIPTLPLFNGSKSV-NLAKVLIEHELATSN     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      YTLKALCALPLEDCFT------KDPVALVESLELFASGVNGGHLQLDGVTMVSVLPLLRGKKAV-NLAQILMDNDLAATN     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      IIHRIHGSVSDA--------SEGFLMVEVLGVECGFSGAVRDEFVRTNILAIARSLSFSKEDMTVFVQRQMIDQHEEPSN     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      IHLEYTGSMNQQ--------AKY----LVHDVTVMYSGAVSPCVLSDCWRLVLSGPTFKGKSAW-YVDTEIINEFLIDTN     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      LIFLVRCQLQNP--------GVA----ELLSCSHLFKGEIDRRMLDECLHLLRTDSVFKVNDGVFDIRSEEFEDYMEDPL     
  consensus/100%                                  h.h.h...h...................l.th...hpG..t.p...psh.hl.....hphpt.h..htt..hpt......     
  consensus/90%                                   h.h.h...h...................l.th...hpG..t.p...psh.hl.....hphpt.h..htt..hpt......     
  consensus/80%                                   h.hph.h.hp.t................V.shp.hhSGs.ttc...-sh.hl...shFpspp.h..ltt.hh-p.ht.s.     
  consensus/70%                                   hphphhsthp.s..........t...h.V.slphhhSGu.ss+hhhDsl.hlss.PlFpGpcsh.slsp.hh-pthtsop     

                                  cov    pid 2161          .         .         .         2         .         .         .         . 2240
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      -VSSVFQKVKLDFKQHVKELRNKFSYKFQGPEQGLSPLHLYRGQIIERDTIVSRLDVPVTSKSVFLALEALDAADHT-PF     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      KEGDAVGSILLNFGTFYEHIDDRYAYEIVGPECSDSPLVLDGGSILADGKKLSSIKVELTGDVILKALGALESEKEVQSL     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      -DDNILSHVKLNFGDFYSELGNKYAYDLIGPNNPGEPLVLKEGIFYRGNERLSTYKVELSGDVIVKAIGALEDIDSVETL     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      -DNFLMSNVTLDLGGFSPELSDKYSYRLSGPENQEDPLVLKDGAFYVGGERLSTYKVELTGDLVVKALGALEDDEGVVSM     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      -DFKLLECVIMDFSNFLDELRDKYSYVLVGPEEQENPIVFQNGAFMADNQKLSYMRVEIFGDTIVKALGALETDREIENL     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      -DHNVMESVTLDFTKFHDELGDKFCYSLVGPEDQGNPIVLHNGMFMIDNQKLSYLKVEIFGDTIIKALGALDSPREIGSL     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      Q--DTIMVELIP--GESFSVDDPLAYTRLGPDWVPVGLVLIDGDVKELKETVAQLKVSLDTKDVMIFLAELYPEH-MALI     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      QLGHVTPVEIVV-DMER-LQFTEYDFVLVGPCTEPTPLVVHRGGLWECGKKLASFTPVIQDQDLEIFVREVGDTS-SDLL     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      ILGDSLELELLG-SKRILDGIRSIDFERVGPEWEPVPLTVKMGALFEGRNLVQNIIVKLETKDMKVFLAGLEGY---EKI     
  consensus/100%                                  .....h...hhs.........p.hsa.h.GPp....slhh..G.hh..tphlt.h.s.l.sp.h.hhlttl.s......h     
  consensus/90%                                   .....h...hhs.........p.hsa.h.GPp....slhh..G.hh..tphlt.h.s.l.sp.h.hhlttl.s......h     
  consensus/80%                                   ...phh...hls.tt...ph.sphsa.h.GPp...sPlsl.tG.hh.ttphlu.hpV.l.scslhhhlttLts.p....h     
  consensus/70%                                   ..tphht..hls.sthh.cltscasYphlGP-pt.sPLVlppGthhtssppluphcVplpscslhhhLuuL-s.c.ht.l     

                                  cov    pid 2241          :         .         .         .         .         3         .         . 2320
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      LKSLHTYMKT----RMSKSNPCFIRMTQEDLCLLIESYEVAFANILKSESDWVEFGDFALCFSNSLNCIMIADDGGQFKL     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      LTGLWPFIRI---------NNLKVKMAQEDFLLMYEMHRESLLKSLEVFSEWCEFVDFSVCYSKSLRDLVISDSSGSLRL     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      LCQLWPYLKT---------TSQTILFQQEDFVLVYDLHKEQLVRSLDKFGDWLEFSNFKVAFSRSLNDLLVSDPQGQFRL     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      LHQLWPYLKA---------TSQVILFQQEDFTIVHDLYKIQLTKSIESFGEWIEFTNFKVAYSKSLKELVISDTQGSFRL     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      LCNLWPYLKS---------IKKTIDFNQADFEMIYDLHRTALLKSLCQMDSWIEFTSFSVAYSKHLQDLVVSDNLGNLRL     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      LHGLWPYLKA---------TKQIINFDQTDFEMIYDLHRVVLLESIAQFGDWVEFASFKVAFSKHYKDIVVADNLGNLRL     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      KKGIETMLKKSQKHEVDLSRVDLIKCFK----DVG-LTEHDLVDCFSGVIGWVKLSSYTLAYSKHLKDLVIAHPGGGMRL     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      IGALSDMMIDRLGLRMQWSGVDIVSTLR----AAAPSCEGILSAVLEAVDNWVEFKGYALCYSKSRGKVMVQSSGGKLRL     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      SDVLGNLFLHRFRTGEHLLGSEISVILQ----EL-CIDRSILLIPLSLLPDWFAFKDCRLCFSKSRSTLMYEIVGGRFRL     
  consensus/100%                                  .t.l.shhh.............h..h.p.....h....c..h...ht...tWhth.shtlsaSpphtplhht.s.Gth+L     
  consensus/90%                                   .t.l.shhh.............h..h.p.....h....c..h...ht...tWhth.shtlsaSpphtplhht.s.Gth+L     
  consensus/80%                                   hptL.shhht.........t.phl.h.p.....hh..hc..Lhtslp.hspWhcFtsatlsaS+phpplhltps.GphRL     
  consensus/70%                                   lpsLhshh+t.........ssphl.h.Q....hlhphpc..LhpslpthssWlEFssaplsaSKphpclhlucstGphRL     

                                  cov    pid 2321          .        ] 2339
1 sp|B2ZDY2|L_WWAVU/12219      100.0% 100.0%      KGRKCRSASTNPR-PLEIE     
2 sp|Q6UY70|L_GTOVV/12198       97.6%  43.1%      KGITCKPINLSNS-VTEIE     
3 sp|Q6XQI4|L_JUNIN/12210       98.1%  43.2%      KGVTCRPLKHKVE-IKDID     
4 sp|Q6IUF8|L_MACHU/12209       98.0%  43.5%      KGVMCRPLANTLQ-VEDIE     
5 sp|B2C4J3|L_CHAVB/12208       98.0%  42.4%      KGITCRPFRRDQC-IQEIE     
6 sp|Q6UY61|L_SABVB/12212       98.1%  42.0%      KGVTCRLFRQQQS-VEDIE     
7 tr|C5ILC4|C5ILC4_9VIRU/12234  95.9%  33.1%      GGVCCRLLREGTSTIE-IE     
8 sp|O09705|L_LASSJ/12218       96.1%  33.7%      KGRTCEELTRKDECIEDIE     
9 sp|P14240|L_LYCVA/12210       95.7%  33.3%      KGRSCDDWLGGSV-AEDID     
  consensus/100%                                  tGh.Cc.h..t......I-     
  consensus/90%                                   tGh.Cc.h..t......I-     
  consensus/80%                                   KGhpCc.httt.p.hp-I-     
  consensus/70%                                   KGhsC+.hppp.p.lp-IE     

MView 1.63, Copyright © 1997-2018 Nigel P. Brown