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Applied Microbiology, Volume 2, Issue 4

2022 December - 24 articles

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Articles (24)

  • Review
  • Open Access
11 Citations
5,473 Views
12 Pages

Impacts of the Green Revolution on Rhizosphere Microbiology Related to Nutrient Acquisition

  • Mary Dixon,
  • Carley Rohrbaugh,
  • Antisar Afkairin and
  • Jorge Vivanco

30 November 2022

The Green Revolution (GR) involved selective breeding of cereals and the use of high fertilizer inputs with the goal of increasing crop yields to alleviate hunger. As a result of both greater use of inorganic fertilizers and the introduction of semi-...

  • Review
  • Open Access
9 Citations
3,910 Views
11 Pages

Grapevine crown gall (GCG), which is caused by tumorigenic Allorhizobium vitis (=Rhizobium vitis), is the most important bacterial disease in grapevine, and its economic impact on grapevine is very high. When young vines develop GCG, they often die,...

  • Article
  • Open Access
2 Citations
3,348 Views
16 Pages

Six bacteria (Bacillus velezensis 13, Bacillus subtillis 42, Pseudomonas fluorescens E221, Pseudomonas Poae EE12, Rahnella sp. EM1, and Serratia sp. EM2) isolated from the soil and litter of Mexican oak forests were characterized by identifying their...

  • Article
  • Open Access
5 Citations
2,645 Views
9 Pages

The Development of a Real-Time PCR Assay for Specific Detection of the NISKHI Sheep Pox Vaccine Virus Strain DNA

  • Alexander Sprygin,
  • Ali Mazloum,
  • Antoinette Van Schalkwyk,
  • Alena Krotova,
  • Kseniya Shalina,
  • Marko Dmitric,
  • Olga Byadovskaya,
  • Larisa Prokhvatilova and
  • Ilya Chvala

Sheep pox (SPP) constitutes a global animal health scourge, despite the numerous efforts targeting the eradication of the disease implemented in affected countries. An efficient control and eradication strategy incorporates the use of live attenuated...

  • Article
  • Open Access
9 Citations
2,906 Views
6 Pages

Validation of a Lateral Flow Assay for Rapid Diagnosis of Histoplasmosis in Advanced HIV Disease, Buenos Aires, Argentina

  • Mariana Andreani,
  • Claudia E. Frola,
  • Diego H. Caceres,
  • Cristina E. Canteros,
  • María J. Rolón,
  • Tom Chiller and
  • Liliana Guelfand

Histoplasmosis is a major cause of mortality in individuals with advanced human immunodeficiency virus (HIV) disease (AHD). We evaluated in patients with AHD a lateral flow assay (LFA) developed by MiraVista® Diagnostics (MVD LFA). Histoplasmosis...

  • Article
  • Open Access
5 Citations
3,802 Views
16 Pages

Antimicrobial resistance is a disseminated global health challenge because many of the genes that cause resistance can transfer horizontally between bacteria. Despite the central role of extrachromosomal DNA elements called plasmids in driving the sp...

  • Article
  • Open Access
2,940 Views
13 Pages

Listeria monocytogenes is a pathogenic, gram-positive bacterium causing foodborne infections and listeriosis, an infection responsible for serious medical conditions, especially for pregnant women, newborns, or people with a weak immune system. Even...

  • Article
  • Open Access
4,257 Views
16 Pages

The Baseline Gut Microbiota Enterotype Directs Lifestyle-Induced Amelioration of Pollen Allergy Severity: A Self Controlled Case-Series Study

  • Satoshi Watanabe,
  • Takayoshi Fukushima,
  • Yusuke Matsuo,
  • Takahito Morimoto,
  • Tsuneo Deguchi,
  • Keisuke Fukumuro and
  • Yu Sawai

Deciphering the key factors underlying individual responses to a habitual diet is important in implementing personalized nutrition strategies to treat allergic diseases. This prospective randomized cohort study aimed to identify key factors determini...

  • Article
  • Open Access
11,950 Views
23 Pages

Pangolins are the only animals other than bats proposed to have been infected with SARS-CoV-2 related coronaviruses (SARS2r-CoVs) prior to the COVID-19 pandemic. Here, we examine the novel SARS2r-CoV we previously identified in game animal metatransc...

  • Article
  • Open Access
2 Citations
2,789 Views
9 Pages

Evaluation of STANDARDTM M10 SARS-CoV-2, a Novel Cartridge-Based Real-Time PCR Assay for the Rapid Identification of Severe Acute Respiratory Syndrome Coronavirus 2

  • Laura Grumiro,
  • Martina Brandolini,
  • Giulia Gatti,
  • Agata Scalcione,
  • Francesca Taddei,
  • Giorgio Dirani,
  • Andrea Mancini,
  • Agnese Denicolò,
  • Martina Manera and
  • Vittorio Sambri
  • + 6 authors

Since the beginning of the pandemic, SARS-CoV-2 has caused problems for all of world’s population, not only in terms of deaths but also in terms of overloading healthcare facilities in all countries. Diagnosis is one of the key aspects of contr...

  • Article
  • Open Access
6 Citations
2,962 Views
12 Pages

This study aimed at evaluating the effects of culture media and environmental factors (temperature and water potential (Ψw)) on the growth of the pathogenic fungus Phytopythium vexans (de Bary) associated with root rot and dieback disease in appl...

  • Article
  • Open Access
1,913 Views
6 Pages

Comparison of Fourteen Rapid Point-of-Care Antigen Tests for SARS-CoV-2: Use and Sensitivity

  • Zulema Pérez-Martínez,
  • Gabriel Martín,
  • Marta Sandoval,
  • Cristian Castelló-Abiétar,
  • Susana Rojo-Alba,
  • Jose Antonio Boga,
  • Santiago Melón and
  • Marta Elena Álvarez-Argüelles

Fast, sensitive techniques are advisable for SARS-CoV-2 detection. Various rapid SARS-CoV-2 antigen detection tests have been developed, but type and quality of the sample, stage of the disease and viral load can all have an impact on their sensitivi...

  • Review
  • Open Access
8 Citations
6,382 Views
18 Pages

Lactic Acid Bacteria as Mucosal Immunity Enhancers and Antivirals through Oral Delivery

  • Assad Moon,
  • Yuan Sun,
  • Yanjin Wang,
  • Jingshan Huang,
  • Muhammad Umar Zafar Khan and
  • Hua-Ji Qiu

Mucosal vaccination offer an advantage over systemic inoculation from the immunological viewpoint. The development of an efficient vaccine is now a priority for emerging diseases such as COVID-19, that was declared a pandemic in 2020 and caused milli...

  • Article
  • Open Access
3,291 Views
10 Pages

Although the fungal microbiome in human skin mainly comprises lipophilic yeasts, including Malassezia species, these microorganisms can cause various dermatitis conditions, including pityriasis versicolor, seborrheic dermatitis, folliculitis, and ato...

  • Article
  • Open Access
6 Citations
3,171 Views
9 Pages

Detection of Hepatitis E Virus (HEV) in Pigs and in the Wild Boar (Sus scrofa) Population of Chieti Province, Abruzzo Region, Italy

  • Fabrizio De Massis,
  • Giuseppe Aprea,
  • Silvia Scattolini,
  • Daniela D’Angelantonio,
  • Alexandra Chiaverini,
  • Iolanda Mangone,
  • Margherita Perilli,
  • Giulia Colacicco,
  • Sabrina Olivieri and
  • Angelo Giammarino
  • + 5 authors

Hepatitis E virus (HEV) is a zoonotic pathogen, causing infectious hepatitis in man. Pigs and wild boars are the natural asymptomatic reservoirs, while the disease in humans could be either asymptomatic or evolve in hepatitis. In Europe, an increasin...

  • Article
  • Open Access
5 Citations
2,870 Views
13 Pages

In this study, the potential for a collection of wild-type L. lactis strains to metabolize the breakdown products of lignocellulose was investigated. The strains, isolated from a variety of environmental sources including grass and vegetables, were a...

  • Brief Report
  • Open Access
1,682 Views
5 Pages

Utilization of Microwaves: A Novel Approach to SARS-CoV-2 Genome Extraction

  • Marta Elena Álvarez-Argüelles,
  • Susana Rojo-Alba,
  • Gabriel Martín,
  • Zulema Pérez-Martínez,
  • Cristian Castelló-Abietar,
  • Jose Antonio Boga and
  • Santiago Melón

In this study, an innovative approach to the heat extraction method has been tested: the use of microwaves, which can dramatically decrease the time that is needed to do the genome extraction. The method can obtain the virus with enough quality to as...

  • Review
  • Open Access
6 Citations
7,847 Views
18 Pages

Zika Virus Infection and Development of Drug Therapeutics

  • Jiao Guo,
  • Xi Ma,
  • Xi Xu,
  • Yan Guo,
  • Bixuan Li,
  • Meihua Wang and
  • Yang Wang

Zika virus (ZIKV) is an emerging flavivirus that is associated with neurological complications, such as neuroinflammatory Guillain Barré Syndrome in adults and microcephaly in newborns, and remains a potentially significant and international p...

  • Article
  • Open Access
3 Citations
4,041 Views
16 Pages

The Growth Medium Affects the Viability of IPEC-J2 Animal Cell Line in the Presence of Probiotic Bacteria

  • Marie-Josée Lemay,
  • Yves Raymond,
  • Claude P. Champagne and
  • Julie Brassard

Background: The IPEC-J2 cell line is frequently used as an in vitro model to study the bioactivity of live probiotics. However, lactic acid bacteria (LB) acidify the medium, and the impact of pH and lactic acid accumulation on cell viability seem to...

  • Article
  • Open Access
5 Citations
4,065 Views
17 Pages

Genomic Features of Pseudomonas putida PCL1760: A Biocontrol Agent Acting via Competition for Nutrient and Niche

  • Daniel Mawuena Afordoanyi,
  • Roderic Gilles Claret Diabankana,
  • Aynur Kamilevich Miftakhov,
  • Evgenii Sergeyevich Kuchaev and
  • Shamil Zavdatovich Validov

Pseudomonasputida strain PCL1760 is a biocontrol agent protecting plants from pathogens via the mechanism of competition for nutrients and niches (CNN). To confirm this mechanism as well as to adapt the strain for biotechnological applications, full...

  • Article
  • Open Access
12 Citations
3,893 Views
14 Pages

30 September 2022

Bacterial-fungal interactions are important in the functioning of natural ecosystems. We examined possible synergistic or antagonistic effects during the degradation of polycyclic aromatic hydrocarbons (PAHs) by a fungal–bacterial co-culture. B...

  • Review
  • Open Access
27 Citations
6,354 Views
19 Pages

Combined Biological and Chemical/Physicochemical Pretreatment Methods of Lignocellulosic Biomass for Bioethanol and Biomethane Energy Production—A Review

  • Shruthi Meenakshisundaram,
  • Antoine Fayeulle,
  • Estelle Léonard,
  • Claire Ceballos,
  • Xiaojun Liu and
  • André Pauss

30 September 2022

Lignocellulosic biomass is a low-cost and environmentally-friendly resource that can be used to produce biofuels such as bioethanol and biogas, which are the leading candidates for the partial substitution of fossil fuels. However, the main challenge...

  • Review
  • Open Access
4 Citations
2,913 Views
15 Pages

Photocatalytic Inactivation of Viruses and Prions: Multilevel Approach with Other Disinfectants

  • Takashi Onodera,
  • Katsuaki Sugiura,
  • Makoto Haritani,
  • Tohru Suzuki,
  • Morikazu Imamura,
  • Yoshifumi Iwamaru,
  • Yasuhisa Ano,
  • Hiroyuki Nakayama and
  • Akikazu Sakudo

23 September 2022

Ag, Cu, Zn, Ti, and Au nanoparticles show enhanced photocatalytic properties. Efficient indoor disinfection strategies are imperative to manage the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. Virucidal agents, such as ethan...

  • Article
  • Open Access
1 Citations
3,004 Views
13 Pages

21 September 2022

Campylobacter is a major cause of acute human diarrheal illness. Broiler chickens constitute a primary reservoir for C. jejuni leading to human infection. Consequently, there is a need for developing novel intervention methods. Antimicrobial peptides...

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Appl. Microbiol. - ISSN 2673-8007