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16 pages, 5072 KB  
Article
Genome-Wide Association Study Reveals Novel QTNs and Candidate Genes Implicated in Resistance to Northern Corn Leaf Blight in Maize (Zea mays L.)
by Udaya Shetty, Muntagodu Shreekanth Sowmya, Hirenallur Chandappa Lohithaswa, Mallana Goudra Mallikarjuna, Ganiga Jadesha and Siddaiah Chandra Nayaka
Int. J. Mol. Sci. 2025, 26(21), 10677; https://doi.org/10.3390/ijms262110677 (registering DOI) - 2 Nov 2025
Abstract
Northern corn leaf blight is a major fungal disease hindering maize production worldwide. Among the various strategies of disease management, the deployment of host plant resistance is the most economic means to mitigate the yield losses, as it is cost-effective and durable. In [...] Read more.
Northern corn leaf blight is a major fungal disease hindering maize production worldwide. Among the various strategies of disease management, the deployment of host plant resistance is the most economic means to mitigate the yield losses, as it is cost-effective and durable. In this study, we performed the genome-wide association study (GWAS) analysis in a set of 336 maize inbred lines. The experimental material was evaluated for northern corn leaf blight disease response across two seasons during the rainy seasons of 2023 and 2024. The ANOVA results and estimates of genetic variability parameters indicated the existence of a substantial amount of genetic variability. High heritability and high genetic advance as percent mean suggested the presence of additive genetic effects in controlling the disease response. GWAS analysis was performed employing GLM, MLM, CMLM, MLMM, FarmCPU and BLINK. The results from GWAS identified 74 marker associations from GLM and FarmCPU models. The QTN S1_7356398, located on chromosome 1, identified from the GLM model, explained 12.12 percent of phenotypic variation. Another QTN S2_51098833 located on chromosome 2, identified from the FarmCPU model, explained 6.14 percent variation. Remaining associations explained lesser PVE, suggesting the quantitative inheritance of NCLB resistance. Candidate gene identification was performed by keeping B73 as a reference genome. The identified QTNs from the current study were found to be located in annotated genes with functional domains implicated in defence mechanisms in maize and other crops. Many candidate genes, including chitinase, putative serine/threonine protein kinase, and aldehyde oxygenase, were identified and found to play a crucial role in plant defence mechanisms against several biotic and abiotic stresses. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
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17 pages, 1438 KB  
Article
Impact of Stocking Density on Growth, Feeding Behavior, and Flesh Quality of Largemouth bass (Micropterus salmoides) in Coupled Aquaponic Systems
by Marco Birolo, Veronica Trabacchin, Paolo Sambo, Stefano Triolone and Carlo Nicoletto
Fishes 2025, 10(11), 552; https://doi.org/10.3390/fishes10110552 (registering DOI) - 2 Nov 2025
Abstract
Stocking density is a key driver of performance in aquaponics, affecting both fish welfare and crop yield. This study evaluated the impact of three initial stocking densities (3.1, 4.1, and 6.2 kg/m3) on survival, growth, feeding behavior, carcass and filet quality [...] Read more.
Stocking density is a key driver of performance in aquaponics, affecting both fish welfare and crop yield. This study evaluated the impact of three initial stocking densities (3.1, 4.1, and 6.2 kg/m3) on survival, growth, feeding behavior, carcass and filet quality of largemouth bass (Micropterus salmoides), as well as on the yield of lettuce (Lactuca sativa), sweet basil (Ocimum basilicum), and Swiss chard (Beta vulgaris var. cicla) cultivated in vertical coupled aquaponic units. A total of 184 fish (109 ± 28 g) were reared for 176 days in nine independent recirculating systems. Fish reared at the lowest density achieved the highest final live weight and specific growth rate, with a better feed conversion ratio, whereas performance declined at higher densities despite similar survival rates. Feeding behavior was generally consistent across groups, although feed intake rate was reduced at the highest density. Carcass and filet quality traits were unaffected by stocking density. Vegetable yield was enhanced by higher fish biomass, with significant increases in lettuce production and a positive trend for basil. These findings indicate that intermediate stocking densities may represent the most sustainable compromise, ensuring fish welfare and acceptable growth while supporting efficient plant production in largemouth bass–based aquaponics. Full article
(This article belongs to the Special Issue Fish Health and Welfare in Aquaculture and Research Settings)
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25 pages, 3759 KB  
Article
Mechanical Analysis and Prototype Testing of Prestressed Rock Anchors
by Xianzhi Xiao, Risheng Zhu, Zhi Huang, Fengying Xiao, Huajie Yin, Tengfei Zhao and Mojia Huang
Buildings 2025, 15(21), 3952; https://doi.org/10.3390/buildings15213952 (registering DOI) - 2 Nov 2025
Abstract
This study primarily investigates the mechanical performance of prestressed anchor foundations. Based on the assumptions of continuity, homogeneity, and isotropy of the anchor foundation and anchoring materials, a simplified elastic analysis model was developed. Using the superposition principle, the working stresses under vertical [...] Read more.
This study primarily investigates the mechanical performance of prestressed anchor foundations. Based on the assumptions of continuity, homogeneity, and isotropy of the anchor foundation and anchoring materials, a simplified elastic analysis model was developed. Using the superposition principle, the working stresses under vertical loads and bending moments were calculated, allowing for the determination of the maximum working stresses within the anchors and the foundation. Additionally, the distribution of bond strength of the prestressed tendons was analyzed, and the concept of effective anchorage length was introduced. The reliability of the model was validated through prototype testing, with the measured free segment strain values showing a high degree of consistency with theoretical calculations, with errors within 6.5%. Empirical data on ultimate bearing capacity and bond characteristics were also obtained. By integrating numerical calculations with experimental results, the performance of the anchoring system under extreme and specialized loading conditions was analyzed. The experimental results indicated that the failure modes of all anchor foundations were characterized by bond failure at the interface between the anchor and the surrounding rock mass. Based on the experimental data, a reasonable anchorage length satisfying design strength requirements was proposed. The findings provide a theoretical foundation and practical guidance for the design and application of prestressed anchor foundations in structures such as wind turbine towers. Full article
(This article belongs to the Section Building Structures)
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21 pages, 1041 KB  
Article
Biochemical Effects of Natural and Nanoparticle Fish and Algal Oils in Gilt Pregnancy Diets on Base Excision Repair Enzymes in Newborn Piglets—Socioeconomic Implications for Regional Pig Farming—Preliminary Results
by Paweł Kowalczyk, Monika Sobol, Joanna Makulska, Andrzej Węglarz, Apoloniusz Kurylczyk, Mateusz Schabikowski and Grzegorz Skiba
Int. J. Mol. Sci. 2025, 26(21), 10676; https://doi.org/10.3390/ijms262110676 (registering DOI) - 2 Nov 2025
Abstract
Base excision repair (BER) is an important mechanism for maintaining genomic integrity and preventing DNA damage and mutations induced by oxidative stress. This study aimed to examine the relationship between oxidative stress and BER activity in newborn piglets by supplementing their mothers’ diets [...] Read more.
Base excision repair (BER) is an important mechanism for maintaining genomic integrity and preventing DNA damage and mutations induced by oxidative stress. This study aimed to examine the relationship between oxidative stress and BER activity in newborn piglets by supplementing their mothers’ diets during pregnancy with long-chain n-3 polyunsaturated fatty acids (PUFAs) from algal and fish oils, provided either in natural form or as nanoparticles. BER enzyme activity was assessed using a nicking assay, and their gene expression levels by RT-qPCR in the livers of pregnant gilts and their offspring. Preliminary results indicated that maternal supplementation with oils rich in long-chain n-3 PUFAs significantly reduced (by 32%) BER capacity in the livers of their offspring. A corresponding decrease in mRNA expression of BER genes (TDG, MPG, OGG1) was observed in piglets from gilts receiving fish and algal oil supplements. Maternal supplementation with long-chain n-3 PUFAs may protect foetuses and neonates against oxidative stress, reducing DNA damage and enhancing genomic stability, which could positively influence early postnatal growth. The observed reduction in BER enzyme activity in newborn piglets likely reflected improved DNA integrity, and natural oil forms appeared more effective than their nanoparticle formulations. Disparities in socioeconomic areas related to access to functional foods with health-promoting properties highlight the importance of targeted strategies that integrate local systems and promote nutritional equity. Full article
(This article belongs to the Special Issue Molecular Progression of Genetics in Breeding of Farm Animals)
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29 pages, 2147 KB  
Article
An Analysis of the Computational Complexity and Efficiency of Various Algorithms for Solving a Nonlinear Model of Radon Volumetric Activity with a Fractional Derivative of a Variable Order
by Dmitrii Tverdyi
Computation 2025, 13(11), 252; https://doi.org/10.3390/computation13110252 (registering DOI) - 2 Nov 2025
Abstract
The article presents a study of the computational complexity and efficiency of various parallel algorithms that implement the numerical solution of the equation in the hereditary α(t)-model of radon volumetric activity (RVA) in a storage chamber. As a test [...] Read more.
The article presents a study of the computational complexity and efficiency of various parallel algorithms that implement the numerical solution of the equation in the hereditary α(t)-model of radon volumetric activity (RVA) in a storage chamber. As a test example, a problem based on such a model is solved, which is a Cauchy problem for a nonlinear fractional differential equation with a Gerasimov–Caputo derivative of a variable order and variable coefficients. Such equations arise in problems of modeling anomalous RVA variations. Anomalous RVA can be considered one of the short-term precursors to earthquakes as an indicator of geological processes. However, the mechanisms of such anomalies are still poorly understood, and direct observations are impossible. This determines the importance of such mathematical modeling tasks and, therefore, of effective algorithms for their solution. This subsequently allows us to move on to inverse problems based on RVA data, where it is important to choose the most suitable algorithm for solving the direct problem in terms of computational resource costs. An analysis and an evaluation of various algorithms are based on data on the average time taken to solve a test problem in a series of computational experiments. To analyze effectiveness, the acceleration, efficiency, and cost of algorithms are determined, and the efficiency of CPU thread loading is evaluated. The results show that parallel algorithms demonstrate a significant increase in calculation speed compared to sequential analogs; hybrid parallel CPU–GPU algorithms provide a significant performance advantage when solving computationally complex problems, and it is possible to determine the optimal number of CPU threads for calculations. For sequential and parallel algorithms implementing numerical solutions, asymptotic complexity estimates are given, showing that, for most of the proposed algorithm implementations, the complexity tends to be n2 in terms of both computation time and memory consumption. Full article
(This article belongs to the Section Computational Engineering)
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26 pages, 3560 KB  
Article
Intelligent Identification Method of Valve Internal Leakage in Thermal Power Station Based on Improved Kepler Optimization Algorithm-Support Vector Regression (IKOA-SVR)
by Fengsheng Jia, Tao Jin, Ruizhou Guo, Xinghua Yuan, Zihao Guo and Chengbing He
Computation 2025, 13(11), 251; https://doi.org/10.3390/computation13110251 (registering DOI) - 2 Nov 2025
Abstract
Valve internal leakage in thermal power stations exhibits a strong concealed nature. If it cannot be discovered and predicted of development trend in time, it will affect the safe and economical operation of plant equipment. This paper proposed an intelligent identification method for [...] Read more.
Valve internal leakage in thermal power stations exhibits a strong concealed nature. If it cannot be discovered and predicted of development trend in time, it will affect the safe and economical operation of plant equipment. This paper proposed an intelligent identification method for valve internal leakage that integrated an Improved Kepler Optimization Algorithm (IKOA) with Support Vector Regression (SVR). The Kepler Optimization Algorithm (KOA) was improved using the Sobol sequence and an adaptive Gaussian mutation strategy to achieve self-optimization of the key parameters in the SVR model. A multi-step sliding cross-validation method was employed to train the model, ultimately yielding the IKOA-SVR intelligent identification model for valve internal leakage quantification. Taking the main steam drain pipe valve as an example, a simulation case validation was carried out. The calculation example used Mean Squared Error (MSE), Root Mean Squared Error (RMSE), Mean Absolute Error (MAE), Mean Absolute Percentage Error (MAPE) and determination coefficient (R2) as performance evaluation metrics, and compared and analyzed the training and testing dataset using IKOA-SVR, KOA-SVR, Particle Swarm Optimization (PSO)-SVR, Random Search (RS)-SVR, Grid Search (GS)-SVR, and Bayesian Optimization (BO)-SVR methods, respectively. For the testing dataset, the MSE of IKOA-SVR is 0.65, RMSE is 0.81, MAE is 0.49, and MAPE is 0.0043, with the smallest values among the six methods. The R2 of IKOA-SVR is 0.9998, with the largest value among the six methods. It indicated that IKOA-SVR can effectively solve problems such as getting stuck in local optima and overfitting during the optimization process. An Out-Of-Distribution (OOD) test was conducted for two scenarios: noise injection and Region-Holdout. The identification performance of all six methods decreased, with IKOA-SVR showing the smallest performance decline. The results show that IKOA-SVR has the strongest generalization ability and robustness, the best effect in improving fitting ability, the smallest identification error, the highest identification accuracy, and results closer to the actual value. The method presented in this paper provides an effective approach to solve the problem of intelligent identification of valve internal leakage in thermal power station. Full article
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30 pages, 4326 KB  
Article
Experimental Study on Zeolite–Polyester-Coated Jute–Sisal Fibre Back Sheets for Improved Efficiency of Solar Panels: A Renewable Composite Material Strategy
by Aishwarya Sathyanarayanan, Balasubramanian Murugesan and Narayanamoorthi Rajamanickam
J. Compos. Sci. 2025, 9(11), 599; https://doi.org/10.3390/jcs9110599 (registering DOI) - 2 Nov 2025
Abstract
This study examines the potential of jute–sisal (JS) fibre, both coated and uncoated, as a sustainable alternative to solar panels with polyethylene terephthalate (PET) back sheets. The coated version was developed using a zeolite–polyester resin composite to enhance thermal performance. The investigation was [...] Read more.
This study examines the potential of jute–sisal (JS) fibre, both coated and uncoated, as a sustainable alternative to solar panels with polyethylene terephthalate (PET) back sheets. The coated version was developed using a zeolite–polyester resin composite to enhance thermal performance. The investigation was carried out in two phases: controlled laboratory testing using a solar-cell tester and a 90-day real-world evaluation under natural environmental conditions. In controlled conditions, solar panels with coated JS (CJS) fibre back sheets exhibited improved electrical performances compared to PET panels, including higher current (1.23 A), voltage (12.79 V), maximum power output (14.79 W), efficiency (13.47%), and fill factor (94.03%). Lower series resistance and higher shunt resistance further indicated superior electrical characteristics. Under real-world conditions, CJS panels consistently outperformed PET-based panels, showing a 6% increase in current and an 8% increase in voltage. The model showed strong agreement with the experimental results. These findings suggest that coated JS fibre is a viable, eco-friendly alternative to PET for back sheets in solar panels. Further research should examine its long-term durability, environmental resistance, and commercial scalability. Full article
(This article belongs to the Section Fiber Composites)
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22 pages, 827 KB  
Article
Unilateral Resistance Training Strategies for Boosting Rehabilitation: An Expert Survey
by Ioana Mădălina Petre, Mircea Boșcoianu and Petronela Mocanu
J. Funct. Morphol. Kinesiol. 2025, 10(4), 425; https://doi.org/10.3390/jfmk10040425 (registering DOI) - 2 Nov 2025
Abstract
Objectives: This research paper proposes an innovative framework for developing adaptive and dedicated rehabilitation strategies based on the perceptions of specialists in sports rehabilitation (RT), sports training (AR) and with mixed expertise (RT+AR) regarding advanced resistance training methods, including Effort-Based Training (EBT-3/7), Cluster [...] Read more.
Objectives: This research paper proposes an innovative framework for developing adaptive and dedicated rehabilitation strategies based on the perceptions of specialists in sports rehabilitation (RT), sports training (AR) and with mixed expertise (RT+AR) regarding advanced resistance training methods, including Effort-Based Training (EBT-3/7), Cluster Training (CT), Rest-Pause Training (RPT) and Post-Activation Potentiation (PAP). The aim of this paper was to develop a tailored strategy for rehabilitation programs, grounded in a targeted selection of training methods, short-term periodization and exercises structured around key training variables such as frequency, intensity and volume. Methods: In order to reach this objective, a quantitative research method is proposed, aiming to identify the experts’ opinion on the way of managing and integrating Unilateral Resistance Training Exercise (URTE). Data processing and analysis were conducted by means of specific tests supplied by the SPSS Statistics for Windows (version 20.0, IBM Corp., Armonk, NY, USA)Results: The findings indicate that EBT-3/7 is perceived as the most effective method for rehabilitation with minimal injury risk, whereas CT and PAP are associated with performance benefits but higher perceived injury risk. RT+AR specialists reported more frequent use of these methods and higher perceived effectiveness. Additionally, they demonstrated superior operational and dynamic capabilities compared to single-domain specialists. Conclusions: According to specialists’ opinions, URTE is effective for post-injury rehabilitation, with combined rehabilitation and training expertise enhancing utilization, perceived effectiveness and implementation of personalized, performance-oriented strategies. Full article
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14 pages, 1919 KB  
Article
Crunchiness of Osmotically Dehydrated Freeze-Dried Strawberries
by Agata Marzec, Jolanta Kowalska, Marcin Korolczuk and Hanna Kowalska
Appl. Sci. 2025, 15(21), 11704; https://doi.org/10.3390/app152111704 (registering DOI) - 2 Nov 2025
Abstract
Consumers prefer snacks that are tasty, healthy, and crunchy. However, optimizing crunchiness using sensory methods is time-consuming and expensive. Therefore, this paper proposes a new approach to measuring instrumental crunchiness. Whole strawberries of the “Honeoya” variety were osmotic dehydrated in a sucrose solution [...] Read more.
Consumers prefer snacks that are tasty, healthy, and crunchy. However, optimizing crunchiness using sensory methods is time-consuming and expensive. Therefore, this paper proposes a new approach to measuring instrumental crunchiness. Whole strawberries of the “Honeoya” variety were osmotic dehydrated in a sucrose solution or chokeberry juice concentrate for 1, 2, and 3 h before freeze-drying. Texture was analyzed using acoustic emission (AE) and a compression test. The crunchiness index was calculated taking into account the number of AE events and mechanical energy. The content of bioactive substances, water activity, and porosity of the freeze-dried products were also assessed. Freeze-dried fruits that were osmotically dehydrated in chokeberry juice concentrate were characterized by lower final water activity and higher content of bioactive substances, but their crunchiness was the lowest. The crunchiest, loudest, and least hard were freeze-dried strawberries osmotically dehydrated in the sucrose solution. The tested freeze-dried strawberries differed in the range of sound frequencies generated, which indicates a different cracking mechanism. Full article
(This article belongs to the Section Agricultural Science and Technology)
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21 pages, 64275 KB  
Article
Characterization on Mode-I/II Interlaminar Strength and Fracture Toughness of Co-Cured Fiber–Metal Laminates
by Mingjie Wang, Hongyi Hao, Qinghao Liu, Xinyue Miao, Ziye Lai, Tianqi Yuan, Guohua Zhu and Zhen Wang
Polymers 2025, 17(21), 2937; https://doi.org/10.3390/polym17212937 (registering DOI) - 2 Nov 2025
Abstract
This study systematically evaluates the mode-I (opening) and mode-II (shearing) interlaminar strength and fracture toughness of four co-cured fiber–metal laminates (FMLs): AL–CF (aluminum–carbon fiber fabric), AL–GF (aluminum–glass fiber fabric), AL–HC (aluminum–carbon/glass hybrid fabric), and AL–HG (aluminum–glass/carbon hybrid fabric). Epoxy adhesive films were interleaved [...] Read more.
This study systematically evaluates the mode-I (opening) and mode-II (shearing) interlaminar strength and fracture toughness of four co-cured fiber–metal laminates (FMLs): AL–CF (aluminum–carbon fiber fabric), AL–GF (aluminum–glass fiber fabric), AL–HC (aluminum–carbon/glass hybrid fabric), and AL–HG (aluminum–glass/carbon hybrid fabric). Epoxy adhesive films were interleaved between metal and composite plies to enhance interfacial bonding. Mode-I interlaminar tensile strength (ILTS) and mode-II interlaminar shear strength (ILSS) were measured using curved beam and short beam tests, respectively, while mode-I and mode-II fracture toughness (GIc and GIIc) were obtained from double cantilever beam (DCB) and end-notched flexure (ENF) tests. Across laminates, interlaminar tensile strength (ILTS) values lie in a narrow band of 31.6–31.8 MPa and interlaminar shear strength (ILSS) values in 41.0–41.9 MPa. The mode-I initiation (GIc,init) and propagation (GIc, prop) toughnesses are 0.44–0.56 kJ/m2 and 0.54–0.64 kJ/m2, respectively, and the mode-II toughness (GIIc) is 0.65–0.79 kJ/m2. Scanning electron microscopy reveals that interlaminar failure localizes predominantly at the metal–adhesive interface, displaying river-line features under mode-I and hackle patterns under mode-II, whereas the adhesive–composite interface remains intact. Collectively, the results indicate that, under the present processing and test conditions, interlaminar strength and toughness are governed by the metal–adhesive interface rather than the composite reinforcement type, providing a consistent strength–toughness baseline for model calibration and interfacial design. Full article
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27 pages, 915 KB  
Review
Sex-Specific Molecular and Genomic Responses to Endocrine Disruptors in Aquatic Species: The Central Role of Vitellogenin
by Faustina Barbara Cannea, Cristina Porcu, Maria Cristina Follesa and Alessandra Padiglia
Genes 2025, 16(11), 1317; https://doi.org/10.3390/genes16111317 (registering DOI) - 2 Nov 2025
Abstract
Endocrine-disrupting chemicals (EDCs) are widespread contaminants that interfere with hormonal signaling and compromise reproductive success in aquatic organisms. Vitellogenin (VTG) is one of the most widely established biomarkers of estrogenic exposure, especially in males and juveniles. However, evidence from multi-omics studies indicates that [...] Read more.
Endocrine-disrupting chemicals (EDCs) are widespread contaminants that interfere with hormonal signaling and compromise reproductive success in aquatic organisms. Vitellogenin (VTG) is one of the most widely established biomarkers of estrogenic exposure, especially in males and juveniles. However, evidence from multi-omics studies indicates that VTG induction occurs within broader transcriptional and regulatory networks, involving genes such as cyp19a1 (aromatase), cyp1a (cytochrome P4501A), and other stress-responsive genes, underscoring the complexity of endocrine disruption. This review focuses on nuclear receptor isoforms, including estrogen receptor alpha (ERα), estrogen receptor beta (ERβ), and androgen receptor (AR) variants. We examine the diversification of vtg gene repertoires across teleost genomes and epigenetic mechanisms, such as DNA methylation and microRNAs, that modulate sex-dependent sensitivity. In addition, we discuss integrative approaches that combine VTG with transcriptomic, epigenetic, and histological endpoints. Within the Adverse Outcome Pathway (AOP) and weight-of-evidence (WoE) frameworks, these strategies provide mechanistic links between receptor activation and reproductive impairment. Finally, we outline future directions, focusing on the development of sex-specific biomarker panels, the integration of omics-based data with machine learning, and advances in ecogenomics. Embedding molecular responses into ecological and regulatory contexts will help bridge mechanistic insights with environmental relevance and support sustainability goals such as SDG 14 (Life Below Water). Full article
(This article belongs to the Section Animal Genetics and Genomics)
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27 pages, 4682 KB  
Article
Expression Profile and Clinical Relevance of ADAR Family Genes in Head and Neck Squamous Cell Carcinoma
by Tomasz Kolenda, Piotr Białas, Paulina Poter, Marlena Janiczek-Polewska, Anna Zapłata, Kacper Guglas, Patrycja Mantaj, Anna Przybyła, Urszula Kazimierczak, Ewa Leporowska, Zefiryn Cybulski and Anna Teresiak
Genes 2025, 16(11), 1316; https://doi.org/10.3390/genes16111316 (registering DOI) - 2 Nov 2025
Abstract
Background: ADAR1 (ADAR), ADAR2 (ADARB1), and ADAR3 (ADARB2) are deaminase adenosine RNA-specific enzymes that play a significant role in RNA metabolism. ADAR1 (ADAR) and ADAR2 (ADARB1) catalyze A-to-I editing and ADAR3 (ADARB2 [...] Read more.
Background: ADAR1 (ADAR), ADAR2 (ADARB1), and ADAR3 (ADARB2) are deaminase adenosine RNA-specific enzymes that play a significant role in RNA metabolism. ADAR1 (ADAR) and ADAR2 (ADARB1) catalyze A-to-I editing and ADAR3 (ADARB2) plays a regulatory role. The role of these three genes still remains unknown in head and neck cancers (HNSCC). The aim of this study is to reveal the role of deaminase adenosine RNA-specific enzymes in pathomechanisms of HNSCC and to investigate their potential utility as diagnostic and/or prognostic biomarkers. Methods: The quantitative PCR analysis was conducted using RNA isolated from 22 pairs of matched tumor and adjacent normal tissues, 76 formalin-fixed paraffin-embedded (FFPE) tumor samples, and a panel of HNSCC cell lines (DOK, SCC-25, SCC-40, FaDu, and CAL-27). In parallel, transcriptomic and clinical data from the Cancer Genome Atlas HNSCC cohort were analyzed. Patients were stratified into high- and low-expression groups, and statistical assessments included overall survival and progression-free interval analyses, evaluation of gene expression in relation to clinicopathological parameters, correlation with other genes, and functional pathway exploration using gene set enrichment analysis. Results: ADARB2 was significantly downregulated in HNSCC tumor tissues compared to adjacent normal mucosa (p = 0.044), with discriminatory potential to distinguish malignant from non-malignant tissues (AUC = 0.692, p = 0.029). TCGA data confirmed ADAR (p < 0.0001) and ADARB1 (p < 0.0001) upregulation in tumors, while ADARB2 was markedly reduced (p = 0.04). Patients with high ADARB2 expression showed significantly longer overall survival (pa = 0.0121; pb = 0.0098), with a trend toward improved progression-free survival (pb = 0.0681). Subsite analysis revealed high ADAR expression correlated with poor OS in pharyngeal tumors (p < 0.05), whereas high ADARB2 expression was linked to improved DFS (pa = 0.0023, pb = 0.0047). GSEA indicated that low ADARB2 expression was enriched in oncogenic pathways, including Wnt/β-catenin (p = 0.006), MYC targets (p = 0.009), and TGF-β1 (p = 0.009). Conclusions: ADARB2 expression was significantly reduced in HNSCC tumor tissues compared to normal mucosa and demonstrated strong discriminatory power for distinguishing malignant from non-malignant samples. High ADARB2 expression was associated with markedly improved overall survival, whereas low expression correlated with enrichment of oncogenic pathways, including Wnt/β-catenin, Notch, and Hedgehog, consistent with a poorer clinical prognosis. These findings highlight ADARB2 as a promising diagnostic biomarker and independent prognostic factor in HNSCC. Full article
(This article belongs to the Section Human Genomics and Genetic Diseases)
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16 pages, 2811 KB  
Article
Seismic Performance and Architectural Function Recoverability for Self-Centering Precast Concrete Frames with Enhanced Post-Stiffness and Energy Dissipation
by Sicong Wang, Xiaoyan Zhou, Guoqing Yuan, Dandan Zhang, Linjie Huang and Yang Wei
Buildings 2025, 15(21), 3949; https://doi.org/10.3390/buildings15213949 (registering DOI) - 2 Nov 2025
Abstract
Based on the principle of re-centering with low prestress and energy dissipation through sloped friction (SF) energy dissipators, this study proposes a new hysteresis concept characterized by enhanced post-stiffness and energy dissipation for self-centering prestressed concrete (SCPC) frames. The focus of this research [...] Read more.
Based on the principle of re-centering with low prestress and energy dissipation through sloped friction (SF) energy dissipators, this study proposes a new hysteresis concept characterized by enhanced post-stiffness and energy dissipation for self-centering prestressed concrete (SCPC) frames. The focus of this research is to compare the seismic performance of SCPC frames utilizing both traditional and novel hysteresis concepts, aiming to provide critical evidence for the advancement of seismic-resilient structures. Nonlinear dynamic time history analyses were conducted under various seismic levels to investigate the impact of the novel hysteretic concept on seismic performance indicators, including inter-story drift, residual inter-story drift, and beam-column damage. Additionally, the influence of energy dissipator configuration and prestress level on the repair costs of structures subjected to the maximum considered earthquake (MCE) was analyzed to elucidate the structural functional recovery capacity. The results indicate that the combination of low prestress and sloped friction energy dissipators significantly reduces internal forces in beams and columns compared to traditional high prestress SCPC frames with conventional friction energy dissipators. The integration of sloped friction energy dissipators and the application of low prestress to post-tensioned (PT) strands effectively dissipate the energy transmitted to the frame during an earthquake, leading to a substantial reduction in structural damage within the SCPC frame utilizing the new hysteresis concept during large earthquakes, thereby facilitating post-earthquake repairs. Full article
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37 pages, 6437 KB  
Article
A Novel Methodology for Identifying the Top 1% Scientists Using a Composite Performance Index
by Alexey Remizov, Shazim Ali Memon and Saule Sadykova
Publications 2025, 13(4), 55; https://doi.org/10.3390/publications13040055 (registering DOI) - 2 Nov 2025
Abstract
There is a growing need for comprehensive and transparent frameworks in bibliometric evaluation that support fairer assessments and capture the multifaceted nature of research performance. This study proposes a novel methodology for identifying top-performing researchers based on a composite performance index (CPI). Unlike [...] Read more.
There is a growing need for comprehensive and transparent frameworks in bibliometric evaluation that support fairer assessments and capture the multifaceted nature of research performance. This study proposes a novel methodology for identifying top-performing researchers based on a composite performance index (CPI). Unlike existing rankings, this framework presents a multidimensional approach by integrating sixteen weighted bibliometrics metrics, spanning research productivity, citation, publications in top journal percentiles, authorship roles, and international collaboration, into a single CPI, enabling a more nuanced and equitable evaluation of researcher performance. Data were retrieved from SciVal for 1996–2025. Two ranking exercises were conducted with Kazakhstan as the analytical unit. Subject-specific rankings identified the top 1% authors within different research areas, while subject-independent rankings highlighted the overall top 1%. CPI distributions varied markedly across disciplines. A comparative analysis with the Stanford/Elsevier global top 2% list was conducted as additional benchmarking. The results highlight that academic excellence depends on a broad spectrum of strengths beyond just productivity, particularly in competitive disciplines. The CPI provides a consistent and adaptable tool for assessing and recognizing research performance; however, future refinements should enhance data coverage, improve representation of early-career researchers, and integrate qualitative aspects. Full article
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20 pages, 4547 KB  
Article
Fatigue Behaviors of High-Speed Track Slabs Reinforced by GFRP Composite Rebar: Full-Scale Experimental Verification
by Sang-Youl Lee
J. Compos. Sci. 2025, 9(11), 597; https://doi.org/10.3390/jcs9110597 (registering DOI) - 2 Nov 2025
Abstract
This study deals with the fatigue behavior of on-site-installation-type track slabs subject to cycling train load developed by applying glass-fiber-reinforced polymer (GFRP) reinforcing bars. Concrete track slabs have the most severe deterioration in track circuit characteristic values due to the conduction influence of [...] Read more.
This study deals with the fatigue behavior of on-site-installation-type track slabs subject to cycling train load developed by applying glass-fiber-reinforced polymer (GFRP) reinforcing bars. Concrete track slabs have the most severe deterioration in track circuit characteristic values due to the conduction influence of existing steel bars. Therefore, a track slab applying an insulator and lightweight GFRP reinforcement by replacing the existing steel bar was proposed from a design perspective. In order to present the validity of the proposed method, a full-size specimen was manufactured and a fatigue performance test was performed, and the results were compared with the test specimen applied with steel bars. From the results of various fatigue behaviors, it was found that displacement variations during cyclic loading remained within 1 mm, and load variations were within 10 kN, indicating excellent stability under accumulated fatigue cycles. This study analyzed the macro-level structural behavior of GFRP-reinforced concrete track slabs under fatigue loading. Future research will further investigate micro-level bond interactions between the reinforcement and concrete to validate long-term performance. Full article
(This article belongs to the Special Issue Research on Fatigue and Failure Mechanisms of Composites)
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