Journal Description
Agriculture
Agriculture
is an international, scientific peer-reviewed open access journal published monthly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubAg, AGRIS, RePEc, and other databases.
- Journal Rank: JCR - Q1 (Agronomy) / CiteScore - Q2 (Plant Science)
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 17.7 days after submission; acceptance to publication is undertaken in 2.4 days (median values for papers published in this journal in the second half of 2023).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
- Companion journals for Agriculture include: Poultry, Grasses and Crops.
Impact Factor:
3.6 (2022);
5-Year Impact Factor:
3.6 (2022)
Latest Articles
Genome-Wide Identification and Expression Analysis of the Broad-Complex, Tramtrack, and Bric- à-Brac Domain-Containing Protein Gene Family in Potato
Agriculture 2024, 14(5), 771; https://doi.org/10.3390/agriculture14050771 - 16 May 2024
Abstract
The BTB (broad-complex, tramtrack, and bric-a-brac) domain, also known as the POZ (POX virus and zinc finger) domain, is a conserved protein–protein interaction domain present in various organisms. In this study, we conducted a genome-wide search to identify and characterize BTB genes in
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The BTB (broad-complex, tramtrack, and bric-a-brac) domain, also known as the POZ (POX virus and zinc finger) domain, is a conserved protein–protein interaction domain present in various organisms. In this study, we conducted a genome-wide search to identify and characterize BTB genes in Solanum tuberosum. A total of 57 StBTBs were identified and analyzed for their physicochemical properties, chromosomal distribution, gene structure, conserved motifs, phylogenetic relationships, tissue-specific expression patterns, and responses to hormonal and stress treatments. We found that StBTBs were unevenly distributed across potato chromosomes and exhibited diverse gene structures and conserved motifs. Tissue-specific expression analysis revealed differential expression patterns across various potato tissues, implying their roles in plant growth and development. Furthermore, differential expression analysis under hormonal and stress treatments indicated the involvement of StBTBs in abiotic and biotic stress responses and hormone signaling pathways. Protein–protein interaction analysis identified potential interactions with ribosomal proteins, suggesting roles in translational regulation. Additionally, microRNA target site analysis revealed regulatory relationships between StBTBs and miRNAs. Our study provides a comprehensive understanding of the StBTB gene family in potato, laying the groundwork for further functional characterization and manipulation of these genes to improve stress tolerance and agricultural productivity in potato and related plant species.
Full article
(This article belongs to the Special Issue Abiotic Stress Responses in Horticultural Crops)
Open AccessArticle
Climate Change Risks for the Mediterranean Agri-Food Sector: The Case of Greece
by
Elena Georgopoulou, Nikos Gakis, Dimitris Kapetanakis, Dimitris Voloudakis, Maria Markaki, Yannis Sarafidis, Dimitris P. Lalas, George P. Laliotis, Konstantina Akamati, Iosif Bizelis, Markos Daskalakis, Sevastianos Mirasgedis and Iordanis Tzamtzis
Agriculture 2024, 14(5), 770; https://doi.org/10.3390/agriculture14050770 - 16 May 2024
Abstract
The study assesses the direct effects of climate change by 2060, including extreme events, on the productivity of regional crop farming and livestock in Greece, and the broader socio-economic effects on the agri-food and other sectors. Different approaches (i.e., agronomic models, statistical regression
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The study assesses the direct effects of climate change by 2060, including extreme events, on the productivity of regional crop farming and livestock in Greece, and the broader socio-economic effects on the agri-food and other sectors. Different approaches (i.e., agronomic models, statistical regression models, and equations linking thermal stress to livestock output) were combined to estimate the effects on productivity from changes in the average values of climatic parameters, and subsequently the direct economic effects from this long-term climate change. Recorded damages from extreme events together with climatic thresholds per event and crop were combined to estimate the direct economic effects of these extremes. The broader socio-economic effects were then estimated through input–output analysis. Under average levels of future extreme events, the total direct economic losses for Greek agriculture due to climate change will be significant, from EUR 437 million/year to EUR 1 billion/year. These losses approximately double when indirect effects on other sectors using agricultural products as inputs (e.g., food and beverage, hotels, and restaurants) are considered, and escalate further under a tenfold impact of extreme events. Losses in the GDP and employment are moderate at the national level, but significant in regions where the contribution of agriculture is high.
Full article
(This article belongs to the Special Issue Mediterranean Agriculture under Climate Change)
Open AccessSystematic Review
Bacterial Endophytes and Their Contributions to Alleviating Drought and Salinity Stresses in Wheat: A Systematic Review of Physiological Mechanisms
by
Fayha Al-Hawamdeh, Jamal Y. Ayad, Kholoud M. Alananbeh and Muhanad W. Akash
Agriculture 2024, 14(5), 769; https://doi.org/10.3390/agriculture14050769 - 16 May 2024
Abstract
Drought and salinity stresses significantly threaten global wheat productivity, limiting growth and reducing yields, thus endangering food security worldwide. These stresses disrupt physiological processes, impair photosynthesis, and hinder optimal growth and yield by diminishing water uptake, causing osmotic stress, ion toxicity, and oxidative
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Drought and salinity stresses significantly threaten global wheat productivity, limiting growth and reducing yields, thus endangering food security worldwide. These stresses disrupt physiological processes, impair photosynthesis, and hinder optimal growth and yield by diminishing water uptake, causing osmotic stress, ion toxicity, and oxidative stress. In response, various mitigation strategies have been explored, including breeding for stress-tolerant cultivars, improved irrigation techniques, and the application of exogenous osmoprotectants and soil amendments. Among these strategies, the emergence of rhizospheric and endophytic growth-promoting microorganisms has attracted significant attention. Therefore, a systematic review was undertaken to illustrate the role of endophytic bacteria in enhancing wheat tolerance to drought and salinity stresses. This review analyzes physiological mechanisms and research trends, identifies gaps, and discusses implications for sustainable agriculture. An analysis of the literature related to endophytic bacteria in wheat was conducted using databases of major publishers from 2004 to 2023. The review explores their mechanisms, such as phytohormone production and stress-responsive gene induction, emphasizing their contribution to plant growth and stress resilience. The current research trends indicate a growing interest in utilizing endophytic bacteria to mitigate these stresses in wheat cultivation, with studies focusing on understanding their physiological responses and interactions with wheat plants. Future research should concentrate on elucidating the role of endophytic bacteria in enhancing host plant tolerance to multiple stressors, as well as aspects like endophytic mechanism of action , endophytic lifestyle, and transmission pathways. Overall, endophytic bacteria offer promising avenues for sustainable agricultural practices, aiding in crop resilience and food security amid environmental challenges.
Full article
(This article belongs to the Special Issue The Role of Plant Growth-Promoting Bacteria in Crop Improvement)
Open AccessCommunication
The Effect of Combined Application of Biocontrol Microorganisms and Arbuscular Mycorrhizal Fungi on Plant Growth and Yield of Tomato (Solanum lycopersicum L.)
by
Alaa Abdulkadhim A. Almuslimawi, Borbála Kuchár, Susana Estefania Araujo Navas, György Turóczi and Katalin Posta
Agriculture 2024, 14(5), 768; https://doi.org/10.3390/agriculture14050768 - 16 May 2024
Abstract
Sustainable plant production requires less use of synthetic chemicals in plant nutrition and protection. Microbial products are among the most promising substitutes for chemicals. With the increasing popularity and availability of such products, it has become obligatory to use different microbes together. The
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Sustainable plant production requires less use of synthetic chemicals in plant nutrition and protection. Microbial products are among the most promising substitutes for chemicals. With the increasing popularity and availability of such products, it has become obligatory to use different microbes together. The effect of this has been tested in several studies, but their results have sometimes been contradictory depending on the microbial strains tested and the mode of application. We tested the effect of two commercially available antagonists and Funneliformis mosseae alone and in combination on tomato. Mycorrhizal treatment increased plant growth and yield, both alone and combined with the antagonists; however, mycorrhizal root colonization was not influenced by the antagonist. This treatment also led to a slight decrease in the occurrence of Trichoderma spp. on tomato roots but did not impede the colonization of roots by the applied Trichoderma strain. Our result confirmed that Trichoderma asperellum (T34) and Streptomyces griseoviridis (K61) can be safely combined with arbuscular mycorrhizal fungi (AMF), namely with F. mosseae.
Full article
(This article belongs to the Special Issue Advanced Research of Rhizosphere Microbial Activity—Series II)
Open AccessArticle
Little Brands, Big Profits? Effect of Agricultural Geographical Indicators on County-Level Economic Development in China
by
Zhuang Zhang, Qiuxia Yan, Hao Zheng, Mengqing Zeng and Youhua Chen
Agriculture 2024, 14(5), 767; https://doi.org/10.3390/agriculture14050767 - 16 May 2024
Abstract
AGIs (agricultural geographical indicators) are effective quality signals that can improve market welfare, but few studies have investigated the impact of AGIs on economic development. To fill this gap, this paper explores the impact of AGIs on per capita GDP and its mechanisms,
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AGIs (agricultural geographical indicators) are effective quality signals that can improve market welfare, but few studies have investigated the impact of AGIs on economic development. To fill this gap, this paper explores the impact of AGIs on per capita GDP and its mechanisms, according to country-level data in China from 2000 to 2018. For every additional AGI in the country, GDP per capita increased by 0.2–0.4%. Our conclusion remained reliable after various robustness tests. These effects were more salient in western areas, the main grain-producing areas, and settled areas. AGIs related to aquatic environments, animal husbandry, and planting products promoted economic development most significantly. For these effects, encouraging an increase in agricultural value (improving the quantity and quality of products) and promoting the agglomeration of populations, capital, and enterprises in the agricultural sector were the main mechanisms.
Full article
(This article belongs to the Section Agricultural Economics, Policies and Rural Management)
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Open AccessArticle
Effects of Soil Quality Decline on Soil-Dwelling Mesofaunal Communities in Agricultural Lands of the Mollisols Region, China
by
Chen Ma, Xin Yao and Guoming Du
Agriculture 2024, 14(5), 766; https://doi.org/10.3390/agriculture14050766 - 16 May 2024
Abstract
Soil quality decline can adversely affect ecosystem health and land productivity, with soil-dwelling mesofauna considered to potentially fulfill vital functions in accurately predicting these outcomes. However, the current state of research reveals a gap concerning the relationships between soil quality decline and soil-dwelling
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Soil quality decline can adversely affect ecosystem health and land productivity, with soil-dwelling mesofauna considered to potentially fulfill vital functions in accurately predicting these outcomes. However, the current state of research reveals a gap concerning the relationships between soil quality decline and soil-dwelling mesofauna in the Mollisols Region. For a more profound understanding of this issue, we conducted a comprehensive investigation of soil-dwelling mesofaunal communities in the different agricultural lands of the Mollisols Region. In this study, soil-dwelling mesofauna were collected, and 11 soil properties were determined following standard procedures, with soil quality levels quantified by utilizing soil quality index (SQI). Our results revealed that there was a gradient of soil quality across the different agricultural lands, which were divided into five levels, including very strong, strong, medium, weak, and very weak. Subsequently, this investigation provided empirical evidence that the decline in soil quality had implications for soil-dwelling mesofaunal communities in agricultural lands of the Mollisols region. A consistent decrease in the density of soil-dwelling mesofauna was observed with the decline of soil quality. In contrast, a greater richness was observed in areas with relatively weaker soil quality, suggesting that the consequences of soil quality decline on soil-dwelling mesofauna were not exclusively negative. Various taxa of soil-dwelling mesofauna exhibited varying degrees of response to the decline in soil quality. Oribatida was overwhelmingly dominant in the sampling fields with medium soil quality, and most Entomobryidae were found in agricultural lands with very weak soil quality. During soil quality decline, soil nutrients were observed to correlate positively with the density of soil-dwelling mesofauna. Overall, the outcomes of this investigation carry significance for comprehending how soil quality decline relates to soil-dwelling mesofauna, and can provide valuable ecological insights for formulating biodiversity guidelines targeted at preserving soil resources in the Mollisols region.
Full article
(This article belongs to the Special Issue Soil Management for Sustainable Agriculture)
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Open AccessArticle
A Novel Method for Peanut Seed Plumpness Detection in Soft X-ray Images Based on Level Set and Multi-Threshold OTSU Segmentation
by
Yuanyuan Liu, Guangjun Qiu and Ning Wang
Agriculture 2024, 14(5), 765; https://doi.org/10.3390/agriculture14050765 - 16 May 2024
Abstract
The accurate assessment of peanut seed plumpness is crucial for optimizing peanut production and quality. The current method is mainly manual and visual inspection, which is very time-consuming and causes seed deterioration. A novel imaging technique is used to enhance the detection of
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The accurate assessment of peanut seed plumpness is crucial for optimizing peanut production and quality. The current method is mainly manual and visual inspection, which is very time-consuming and causes seed deterioration. A novel imaging technique is used to enhance the detection of peanut seed fullness using a non-destructive soft X-ray, which is suitable for the analysis of the surface or a thin layer of a material. The overall grayscale of the peanut is similar to the background, and the edge of the peanut seed is blurred. The inaccuracy of peanut overall and peanut seed segmentation leads to low accuracy of seed plumpness detection. To improve accuracy in detecting the fullness of peanut seeds, a seed plumpness detection method based on level set and multi-threshold segmentation was proposed for peanut images. Firstly, the level set algorithm is used to extract the overall contour of peanuts. Secondly, the obtained binary image is processed by morphology to obtain the peanut pods (the peanut overall). Then, the multi-threshold OTSU algorithm is used for threshold segmentation. The threshold is selected to extract the peanut seed part. Finally, morphology is used to complete the cavity to achieve the segmentation of the peanut seed. Compared with optimization algorithms, in the segmentation of the peanut pods, average random index (RI), global consistency error (GCE) and variation of information (VI) were increased by 10.12% and decreased by 0.53% and 24.11%, respectively. Compared with existing algorithms, in the segmentation of the peanut seed, the average RI, VI and GCE were increased by 18.32% and decreased by 9.14% and 6.11%, respectively. The proposed method is stable, accurate and can meet the requirements of peanut image plumpness detection. It provides a feasible technical means and reference for scientific experimental breeding and testing grading service pricing.
Full article
(This article belongs to the Special Issue Sensing and Imaging for Quality and Safety of Agricultural Products)
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Open AccessArticle
Optimization Design of Straw-Crushing Residual Film Recycling Machine Frame Based on Sensitivity and Grey Correlation Degree
by
Pengda Zhao, Hailiang Lyu, Lei Wang, Hongwen Zhang, Zhantao Li, Kunyu Li, Chao Xing and Bocheng Guoyao
Agriculture 2024, 14(5), 764; https://doi.org/10.3390/agriculture14050764 - 15 May 2024
Abstract
This paper takes the frame as the research object and explores the vibration characteristics of the frame to address the vibration problem of a 1-MSD straw-crushing and residual film recycling machine in the field operation process, and an accurate identification of the modal
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This paper takes the frame as the research object and explores the vibration characteristics of the frame to address the vibration problem of a 1-MSD straw-crushing and residual film recycling machine in the field operation process, and an accurate identification of the modal parameters of the frame is carried out to solve the resonance problem of the machine, which can achieve cost reduction and increase income to a certain extent. The first six natural frequencies of the frame are extracted by finite element modal identification and modal tests, respectively. The rationality of the modal test results is verified using the comprehensive modal and frequency response confidences. The maximum frequency error of modal frequency results of the two methods is only 6.61%, which provides a theoretical basis for the optimal design of the frame. In order to further analyze the resonance problem of the machine, the external excitation frequency of the machine during normal operation in the field is solved and compared with the first six natural frequencies of the frame. The results show that the first natural frequency of the frame (18.89 Hz) is close to the external excitation generated by the stripping roller (16.67 Hz). The first natural frequency and the volume of the frame are set as the optimization objectives, and the optimal optimization scheme is obtained by using the Optistruct solver, sensitivity method, and grey correlation method. The results indicate the first-order natural frequency of the optimized frame is 21.89 Hz, an increase of 15.882%, which is much higher than the excitation frequency of 16.67 Hz, and resonance can be avoided. The corresponding frame volume is 9.975 × 107 mm3, and the volume reduction is 3.46%; the optimized frame has good dynamic performance, which avoids the resonance of the machine and conforms to the lightweight design criteria of agricultural machinery structures. The research results can provide some theoretical reference for this kind of machine in solving the resonance problem and carrying out related vibration characteristics research.
Full article
(This article belongs to the Section Agricultural Technology)
Open AccessArticle
Interactions between Root Hair Development and Arbuscular Mycorrhizal Fungal Colonization in Trifoliate Orange Seedlings in Response to P Levels
by
Xiu Cao, Yu Zhao, Ren-Xue Xia, Qiang-Sheng Wu, Abeer Hashem and Elsayed Fathi Abd_Allah
Agriculture 2024, 14(5), 763; https://doi.org/10.3390/agriculture14050763 - 15 May 2024
Abstract
Both arbuscular mycorrhizal (AM) fungi and root hairs are crucial in facilitating plant uptake of phosphorus (P), while it is unclear whether and how they respond to varying P supplies. In order to explore how AM fungal colonization and root hair development are
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Both arbuscular mycorrhizal (AM) fungi and root hairs are crucial in facilitating plant uptake of phosphorus (P), while it is unclear whether and how they respond to varying P supplies. In order to explore how AM fungal colonization and root hair development are affected by substrate P supply, trifoliate orange (Poncirus trifoliata) seedlings were inoculated with AM fungus Rhizophagus intraradices and grown under low, moderate, and high P conditions; then, root hair morphological features and AM fungal colonization were measured. Following 120 days of AM fungal inoculation, root hair density, root hair length, AM fungal colonization rate, arbuscule colonization rate, and AM fungal colonization frequency all increased significantly under P-deficient conditions but decreased under high P conditions. Moreover, the colonization of AM fungi had a major impact on root hair formation by altering the expression of related genes and the growth of epidermal cells. The effect of AM fungi was dependent on P supply levels, as evidenced by the fact that root hair density and length increased at high P levels but decreased at low P levels. As a result, root hairs may serve as a preferential site for AM fungal colonization, and their morphology could influence the early stage of AM symbiosis establishment.
Full article
(This article belongs to the Special Issue Arbuscular Mycorrhiza in Cropping Systems)
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Open AccessArticle
Screening of Indicators to Evaluate the Overwintering Growth of Leaf-Vegetable Sweet Potato Seedlings and Their Main Influential Factors
by
Xiao Xiao, Xiaoju Tu, Kunquan Zhong, An Zhang and Zhenxie Yi
Agriculture 2024, 14(5), 762; https://doi.org/10.3390/agriculture14050762 - 14 May 2024
Abstract
Whether the stems and leaves of leaf-vegetable sweet potatoes can be listed ahead of schedule is related to the improvement in economic benefits for farmers, and the key to all of this is to implement the safe overwintering of potato seedlings under the
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Whether the stems and leaves of leaf-vegetable sweet potatoes can be listed ahead of schedule is related to the improvement in economic benefits for farmers, and the key to all of this is to implement the safe overwintering of potato seedlings under the premise of saving production costs. Only in this way can we truly seize the “market opportunity” and achieve the goals of cost saving and increasing economic benefit. In this study, the main leaf-vegetable sweet potato variety Fucai 18 was used as the material, and the L9(34) orthogonal experiment was carried out in a simple solar greenhouse environment for two consecutive years from 2021 to 2022 and from 2022 to 2023, respectively. The effects of nine different combinations of factors on the above-ground and underground agronomic traits of overwintering sweet potato seedlings were studied under the conditions of four factors and three levels: planting density (a); different cutting seedlings (b); rooting agent concentration (c); and transplanting time (d). The methods of principal component analysis, membership function method, cluster analysis, grey correlation degree and stepwise regression analysis were used to evaluate the growth of overwintering seedlings, and try to screen out the key indicators that can be used to identify and evaluate the growth of overwintering sweet potato seedlings. Through range analysis, identify the optimal combination of four factors and three levels, and explore the main factors that have a significant impact on the key indicators for evaluating the growth of overwintering potato seedlings. The results indicate the following: (1) The use of simple sunlight greenhouse in Changsha area can achieve the safe overwintering of vegetable sweet potato seedlings. (2) Stem thickness, root length, and root diameter can be used as three key indicators for identifying and evaluating the growth potential of vegetable sweet potato overwintering seedlings. (3) Under four factors and three levels, the best combination was A3B3C1D1 (planting density of 250,000 plants/ha, stem tip core-plucking seedlings, rooting agent concentration of 50 mg/L, the first batch of transplanting time). (4) The transplanting time (D) is the main factor for the two key evaluation indicators of stem diameter and root diameter, while there is no significant difference in the three other factors. (5) Different cutting seedlings (B) are the main influencing factors for the key evaluation index of root length, while the other three factors have the following impact on root length: transplanting time (D) > rooting agent concentration (C) > planting density (A). The results of this study not only contribute to the construction of a safe overwintering cultivation technology system for vegetable sweet potato seedlings, but also provide a certain theoretical basis for the breeding of new cold-leaf-vegetable sweet potato varieties in the future.
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(This article belongs to the Section Crop Production)
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Open AccessArticle
Heat Stress and Water Irrigation Management Effects on the Fruit Color and Quality of ‘Hongro’ Apples
by
Van Giap Do, Youngsuk Lee, Juhyeon Park, Nay Myo Win, Soon-Il Kwon, Sangjin Yang and Seonae Kim
Agriculture 2024, 14(5), 761; https://doi.org/10.3390/agriculture14050761 - 14 May 2024
Abstract
Increasing fruit crop production sustainability under climate change, particularly increasing temperatures, is a major challenge in modern agriculture. High temperatures affect apple fruit quality and decrease its color. Herein, we constructed an experimental field under temperature simulation to evaluate climate change mitigation strategies
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Increasing fruit crop production sustainability under climate change, particularly increasing temperatures, is a major challenge in modern agriculture. High temperatures affect apple fruit quality and decrease its color. Herein, we constructed an experimental field under temperature simulation to evaluate climate change mitigation strategies for apples. ‘Hongro’ apples were subjected to three treatments: (1) cultivation inside a vinyl house for heat treatment (heat induction), (2) cultivation under water irrigation (heat reduction), and (3) cultivation under normal atmospheric temperature (control). At harvest, the fruits of the heat treatment group exhibited poor coloration, with a lower gene expression and pigment accumulation than those of the water irrigation and control groups. Furthermore, the fruit quality of the heat treatment group decreased, with a lower soluble solid content (SSC) and titratable acidity (TA), and smaller fruits. Additionally, a higher fruit disorder (cracking and spots) ratio was observed in the heat treatment group than in the water irrigation and control groups. However, the fruits of the water irrigation group exhibited higher quality indexes (flesh firmness, SSC, and TA) and less cracking than those of the heat treatment and control groups. Heat reduction, including water irrigation, may be used for orchard management to prevent climate change-induced increasing temperatures.
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(This article belongs to the Special Issue Organic Management Approaches and Practices to Support Sustainable Horticultural and Fruit Plants Production)
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Open AccessArticle
Examining the Percent Canopy Cover and Health of Winter Wheat in No-Till and Conventional Tillage Plots Using a Drone
by
Clement E. Akumu, Judith N. Oppong and Sam Dennis
Agriculture 2024, 14(5), 760; https://doi.org/10.3390/agriculture14050760 - 14 May 2024
Abstract
The percent canopy cover and health of winter wheat are important crop performance indicators. Thus, understanding how tillage management practices affect these indicators is beneficial for improving crop performance and consequently yield. The availability of high-resolution drone data with spectral characteristics provides an
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The percent canopy cover and health of winter wheat are important crop performance indicators. Thus, understanding how tillage management practices affect these indicators is beneficial for improving crop performance and consequently yield. The availability of high-resolution drone data with spectral characteristics provides an opportunity to examine the percent canopy cover and health of winter wheat in different tillage systems. This is because the use of drones provides real-time high spatial resolution and temporal images to effectively monitor winter wheat conditions throughout the growing season. Nonetheless, very limited studies have utilized drone data for assessing the percent canopy cover and health conditions of winter wheat for different tillage practices. This study aimed to examine the percent canopy cover and health of winter wheat in no-till and conventional tillage plots using a drone. We used the mean Normalized Difference Vegetation Index (NDVI) ± Standard Deviation (SD) (0.89 ± 0.04) of winter wheat for the growth stages of tillering, jointing, and boot/heading to generate the percent wheat canopy cover. The Normalized Difference Red-Edge (NDRE) produced for winter wheat at the middle and late growth stages was used as a proxy for wheat health condition. We found that the mean percentage canopy cover of winter wheat was about 4% higher in no-till compared to conventional tillage plots in most of the growing season. The mean NDRE ± standard error (SE) of winter wheat was about 0.44 ± 0.01 and 0.43 ± 0.01 for no-till and conventional tillage plots, respectively, during the mid- and late growth stages. There was no significant difference in either the percent canopy cover or health of winter wheat between no-till and conventional tillage plots. The results generated in this study could be used to support farmers’ decision-making process regarding tillage practices and wheat crop performance.
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(This article belongs to the Section Digital Agriculture)
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Open AccessArticle
Behavior of Thiamethoxam and Clothianidin in Young Oilseed Rape Plants before Flowering, Monitored by QuEChERS/LC–MS/MS Protocol
by
Izabela Hrynko, Gulzhakhan Ilyasova, Magdalena Jankowska, Ewa Rutkowska, Piotr Kaczyński and Bożena Łozowicka
Agriculture 2024, 14(5), 759; https://doi.org/10.3390/agriculture14050759 - 14 May 2024
Abstract
Nitro-substituted neonicotinoid insecticides have been widely used until recently to control a range of important agricultural pests. Growing concerns about thiamethoxam’s toxicity to pollinators have led to its use being restricted or to it even being banned in some countries. Nevertheless, in Asia,
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Nitro-substituted neonicotinoid insecticides have been widely used until recently to control a range of important agricultural pests. Growing concerns about thiamethoxam’s toxicity to pollinators have led to its use being restricted or to it even being banned in some countries. Nevertheless, in Asia, Africa, Southeast Europe, and South America thiamethoxam is still used. Although thiamethoxam has been intensively studied all over the world, its dissipation dynamics have not been studied in depth. The subject of the present study was to (1) develop and validate a QuEChERS/LC-MS/MS protocol for the determination of thiamethoxam and its main metabolite clothianidin in samples of young oilseed rape plants with high chlorophyll content, and (2) make a comparison of the degradation behaviors of thiamethoxam and clothianidin in two crops of winter oilseed rape, cultivated on soils with different pH. For determination of thiamethoxam and clothianidin in plant material with high chlorophyll content, a QuEChERS/LC–MS/MS protocol enabling the detection of low levels of compound concentrations was developed. The proposed clean-up protocol provided recoveries within the range of 92–98% for the compounds under analysis. Precision, calculated as relative standard deviation, was below 20%. Satisfactory linearity of the method was obtained in the concentration range under analysis (0.001–1.0 mg kg−1). Differences in degradation of both insecticides, depending on the physico-chemical properties of the soil, were observed. Thiamethoxam and clothianidin residues disappeared in plants very quickly, and they were not detected below the limit of quantitation in oilseed rape at the flowering stage.
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(This article belongs to the Section Crop Protection, Diseases, Pests and Weeds)
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Open AccessArticle
Utilization of Rhodopseudomonas palustris in Crop Rotation Practice Boosts Rice Productivity and Soil Nutrient Dynamics
by
Laurence Shiva Sundar, Kuei-Shan Yen, Yao-Tsung Chang and Yun-Yang Chao
Agriculture 2024, 14(5), 758; https://doi.org/10.3390/agriculture14050758 - 13 May 2024
Abstract
Using beneficial microorganisms, such as purple non-sulfur bacteria (PNSB), has shown enormous potential for improving plant growth and agricultural production. However, the full extent of their benefits and interactions with agricultural practices is yet to be fully understood. The present study aimed to
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Using beneficial microorganisms, such as purple non-sulfur bacteria (PNSB), has shown enormous potential for improving plant growth and agricultural production. However, the full extent of their benefits and interactions with agricultural practices is yet to be fully understood. The present study aimed to investigate the use of PNSB in crop rotation practice, focusing on its impact on rice growth and yield. The experiment was conducted over two rice cropping seasons, with djulis grown between the rice as a rotation crop. The study shows that PNSB treatment increased the concentration of 5-aminolevulinic acid (5-ALA) in plants, indicating enhanced photosynthesis. Moreover, when combined with crop rotation, PNSB remarkably improved soil fertility. These combined benefits resulted in substantial increases in tiller numbers (163%), leaf chlorophyll content (13%), and lodging resistance (66%), compared to the untreated plants. The combined treatment also resulted in higher productive tillers per hill (112%), average grain per hill (65%), and grain fertility (26%). This led to increased grain yield (65%), shoot dry weight (15%), and harvest index (37%). The findings clearly suggest that the incorporation of PNSB in crop rotation strategies can significantly augment the growth and yield of rice crops. These insights, pivotal for sustainable rice cultivation, hold the potential to simultaneously tackle the pressing issues of global food security and climate change.
Full article
(This article belongs to the Section Crop Production)
Open AccessArticle
Establishing a Hyperspectral Model for the Chlorophyll and Crude Protein Content in Alpine Meadows Using a Backward Feature Elimination Method
by
Tong Ji and Xiaoni Liu
Agriculture 2024, 14(5), 757; https://doi.org/10.3390/agriculture14050757 - 13 May 2024
Abstract
(1) Background: The effective selection of hyperspectral feature bands is pivotal in monitoring the nutritional status of intricate alpine grasslands on the Qinghai–Tibet Plateau. The traditional methods often employ hierarchical screening of multiple feature indicators, but their universal applicability suffers due to the
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(1) Background: The effective selection of hyperspectral feature bands is pivotal in monitoring the nutritional status of intricate alpine grasslands on the Qinghai–Tibet Plateau. The traditional methods often employ hierarchical screening of multiple feature indicators, but their universal applicability suffers due to the use of a consistent methodology across diverse environmental contexts. To remedy this, a backward feature elimination (BFE) selection method has been proposed to assess indicator importance and stability. (2) Methods: As research indicators, the crude protein (CP) and chlorophyll (Chl) contents in degraded grasslands on the Qinghai–Tibet Plateau were selected. The BFE method was integrated with partial least squares regression (PLS), random forest (RF) regression, and tree-based regression (TBR) to develop CP and Chl inversion models. The study delved into the significance and consistency of the forage quality indicator bands. Subsequently, a path analysis framework (PLS-PM) was constructed to analyze the influence of grassland community indicators on SpecChl and SpecCP. (3) Results: The implementation of the BFE method notably enhanced the prediction accuracy, with ΔR2RF-Chl = 56% and ΔR2RF-CP = 57%. Notably, spectral bands at 535 nm and 2091 nm emerged as pivotal for CP prediction, while vegetation indices like the PRI and mNDVI were critical for Chl estimation. The goodness of fit for the PLS-PM stood at 0.70, indicating the positive impact of environmental factors such as grassland cover on SpecChl and SpecCP prediction (rChl = 0.73, rCP = 0.39). SpecChl reflected information pertaining to photosynthetic nitrogen associated with photosynthesis (r = 0.80). (4) Disscusion: Among the applied model methods, the BFE+RF method is excellent in periodically discarding variables with the smallest absolute coefficient values. This variable screening method not only significantly reduces data dimensionality, but also gives the best balance between model accuracy and variables, making it possible to significantly improve model prediction accuracy. In the PLS-PM analysis, it was shown that different coverage and different community structures and functions affect the estimation of SpecCP and SpecChl. In addition, SpecChl has a positive effect on the estimation of SpecCP (r = 0.80), indicating that chlorophyll does reflect photosynthetic nitrogen information related to photosynthesis, but it is still difficult to obtain non-photosynthetic and compound nitrogen information. (5) Conclusions: The application of the BFE + RF method to monitoring the nutritional status of complex alpine grasslands demonstrates feasibility. The BFE filtration process, focusing on importance and stability, bolsters the system’s generalizability, resilience, and versatility. A key research avenue for enhancing the precision of CP monitoring lies in extracting non-photosynthetic nitrogen information.
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(This article belongs to the Section Digital Agriculture)
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Microbial Biomass and Rhizosphere Soil Properties in Response to Heavy Metal-Contaminated Flooding
by
Tibor Szili-Kovács and Tünde Takács
Agriculture 2024, 14(5), 756; https://doi.org/10.3390/agriculture14050756 - 13 May 2024
Abstract
Mining and metallurgy are the main sources of soil contamination with harmful metals, posing a significant threat to human health and ecosystems. River floodplains in the vicinity of metal mines or industrial plants are often subject to flooding with sediments containing heavy metals,
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Mining and metallurgy are the main sources of soil contamination with harmful metals, posing a significant threat to human health and ecosystems. River floodplains in the vicinity of metal mines or industrial plants are often subject to flooding with sediments containing heavy metals, which can be harmful to the soil ecosystem. This study aimed to investigate the microbial properties of the soil at a metal-contaminated site and to determine the significant relationships between the biological and chemical properties of the soil. The study site was located near the village of Gyöngyösoroszi, in the Mátra mountain region of Northwest Hungary. A phytoremediation experiment was conducted in a metal-polluted floodplain using willow and corn plantations. The soil basal respiration, substrate-induced respiration, soil microbial biomass carbon (MBC), acid phosphatase activities, and soil chemical properties were measured. The soil of the contaminated sites had significantly higher levels of As, Pb, Zn, Cu, Cd, and Ca, whereas the unpolluted sites had significantly higher levels of phosphorus and potassium. The substrate-induced respiration showed a positive correlation with MBC and negative correlations with the metabolic quotient (qCO2). The soil plasticity index and phosphorus showed a positive correlation with MBC, whereas salinity and the presence of Cd, Pb, Zn, As, and Cu showed a negative correlation. Acid phosphomonoesterase activity negatively correlated with the plant-available phosphorus content and MBC, but was positively correlated with the contents of toxic elements, including cadmium, lead, zinc, arsenic, and copper. This study found a significant correlation between the qCO2 and the toxic element content. This suggests that an enhanced metabolic quotient (qCO2), together with a decreased MBC/SOC ratio, could be used to indicate the harmful effect of soil contamination by heavy metals in floodplain soils.
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(This article belongs to the Special Issue Advanced Research of Rhizosphere Microbial Activity—Series II)
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Oilseed Radish: Nitrogen and Sulfur Management Strategies for Seed Yield and Quality—A Case Study in Poland
by
Artur Szatkowski, Zofia Antoszkiewicz, Cezary Purwin and Krzysztof Józef Jankowski
Agriculture 2024, 14(5), 755; https://doi.org/10.3390/agriculture14050755 - 13 May 2024
Abstract
Nitrogen (N) and sulfur (S) fertilization significantly affect seed yield and quality in Brassica oilseed crops. The effect of N and S management on the crop parameters (plant height, stem-base diameter, and number of branches), yield (seed yield components, seed and straw yields,
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Nitrogen (N) and sulfur (S) fertilization significantly affect seed yield and quality in Brassica oilseed crops. The effect of N and S management on the crop parameters (plant height, stem-base diameter, and number of branches), yield (seed yield components, seed and straw yields, harvest index—HI), and the quality of the seeds and oil (crude fat—CF, total protein—TP, crude fiber—CFR, fatty acids profile—FA, acid detergent fiber; and neutral detergent fiber) of oilseed radish (Raphanus sativus L. var. oleiformis Pers.) was analyzed in the study. The effect of N and S fertilization was evaluated in a field experiment in Bałcyny (north-eastern Poland) in 2020–2022. The experiment had a split-plot design with two factors and three replications. The first factor was the N rate (0, 30, 60, 90, 120 kg ha−1) and the second factor was the S rate (0, 15, 30 kg ha−1). Nitrogen fertilization stimulated stem elongation and branching. The average oilseed radish (OSR) seed yield ranged from 0.59 to 1.15–1.25 Mg ha−1. Seed yields increased significantly, up to 90 kg N ha−1 and 15 kg S ha−1. The N fertilizer use efficiency (NFUE) of OSR decreased with a rise in the N rate (from 4.22 to 2.19 kg of seeds per 1 kg N). The application of S did not increase NFUE. The HI ranged from 10% (0–30 kg N ha−1) to 12% (60 kg N ha−1). The contents of CF, TP, and CFR in OSR seeds (kg−1 dry matter—DM) were 383–384 g, 244–249 g, and 97–103 g, respectively. Nitrogen fertilization decreased the CF content (by 5%) and increased the contents of TP (by 5%) and CFR (by 16%) in OSR seeds. Sulfur fertilizer applied at 30 kg ha−1 decreased the CF content (by 2%), but it did not alter the content of TP or CFR. Oilseed radish oil contained 68–70% of monounsaturated FAs (MUFAs) (erucic acid accounted for 2/3 of the total MUFAs), 24–25% of polyunsaturated FAs (PUFAs), and 6–8% of saturated FAs (SFAs). Nitrogen fertilization increased the proportions of SFAs and PUFAs in OSR oil. Nitrogen rates of 60–90 kg ha−1 increased the contents of alpha-tocopherol (α-T), beta-tocopherol (β-T), and gamma-tocopherol (γ-T) in OSR seeds by 32%, 40%, and 27%, respectively. Sulfur fertilization increased the content of PUFAs and decreased the content of MUFAs in OSR oil, while it increased the contents of α-T (by 15%) and γ-T (by 19%) in OSR seeds. Proper N and S management in OSR cultivation can improve crop productivity and the processing suitability of seeds.
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(This article belongs to the Special Issue Fertilizer Management Strategies for Enhancing the Growth, Yield and Quality in Crops)
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Prediction of Live Bulb Weight for Field Vegetables Using Functional Regression Models and Machine Learning Methods
by
Dahyun Kim, Wanhyun Cho, Inseop Na and Myung Hwan Na
Agriculture 2024, 14(5), 754; https://doi.org/10.3390/agriculture14050754 - 12 May 2024
Abstract
(1) Background: This challenge is exacerbated by the aging of the rural population, leading to a scarcity of available manpower. To address this issue, the automation and mechanization of outdoor vegetable cultivation are imperative. Therefore, developing an automated cultivation platform that reduces labor
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(1) Background: This challenge is exacerbated by the aging of the rural population, leading to a scarcity of available manpower. To address this issue, the automation and mechanization of outdoor vegetable cultivation are imperative. Therefore, developing an automated cultivation platform that reduces labor requirements and improves yield by efficiently performing all the cultivation activities related to field vegetables, particularly onions and garlic, is essential. In this study, we propose methods to identify onion and garlic plants with the best growth status and accurately predict their live bulb weight by regularly photographing their growth status using a multispectral camera mounted on a drone. (2) Methods: This study was conducted in four stages. First, two pilot blocks with a total of 16 experimental units, four horizontals, and four verticals were installed for both onions and garlic. Overall, a total of 32 experimental units were prepared for both onion and garlic. Second, multispectral image data were collected using a multispectral camera repeating a total of seven times for each area in 32 experimental units prepared for both onions and garlic. Simultaneously, growth data and live bulb weight at the corresponding points were recorded manually. Third, correlation analysis was conducted to determine the relationship between various vegetation indexes extracted from multispectral images and the manually measured growth data and live bulb weights. Fourth, based on the vegetation indexes extracted from multispectral images and previously collected growth data, a method to predict the live bulb weight of onions and garlic in real time during the cultivation period, using functional regression models and machine learning methods, was examined. (3) Results: The experimental results revealed that the Functional Concurrence Regression (FCR) model exhibited the most robust prediction performance both when using growth factors and when using vegetation indexes. Following closely, with a slight distinction, Gaussian Process Functional Data Analysis (GPFDA), Random Forest Regression (RFR), and AdaBoost demonstrated the next-best predictive power. However, a Support Vector Machine (SVM) and Deep Neural Network (DNN) displayed comparatively poorer predictive power. Notably, when employing growth factors as explanatory variables, all prediction models exhibited a slightly improved performance compared to that when using vegetation indexes. (4) Discussion: This study explores predicting onion and garlic bulb weights in real-time using multispectral imaging and machine learning, filling a gap in research where previous studies primarily focused on utilizing artificial intelligence and machine learning for productivity enhancement, disease management, and crop monitoring. (5) Conclusions: In this study, we developed an automated method to predict the growth trajectory of onion and garlic bulb weights throughout the growing season by utilizing multispectral images, growth factors, and live bulb weight data, revealing that the FCR model demonstrated the most robust predictive performance among six artificial intelligence models tested.
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(This article belongs to the Special Issue Applications of Data Analysis in Agriculture—2nd Edition)
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Characterizing Spatial and Temporal Variations in N2O Emissions from Dairy Manure Management in China Based on IPCC Methodology
by
Bin Hu, Lijie Zhang, Chao Liang, Xiao Yang, Zhengxiang Shi and Chaoyuan Wang
Agriculture 2024, 14(5), 753; https://doi.org/10.3390/agriculture14050753 - 11 May 2024
Abstract
The emission factor method (Tier 1) recommended by the Intergovernmental Panel on Climate Change (IPCC) is commonly used to estimate greenhouse gas (GHG) emissions from livestock and poultry farms. However, the estimation accuracy may vary due to practical differences in manure management across
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The emission factor method (Tier 1) recommended by the Intergovernmental Panel on Climate Change (IPCC) is commonly used to estimate greenhouse gas (GHG) emissions from livestock and poultry farms. However, the estimation accuracy may vary due to practical differences in manure management across China. The objectives of this study were to estimate the direct and indirect nitrous oxide (N2O) emissions from dairy manure management between 1990 and 2021 in China and characterize its spatial and temporal variations following IPCC guideline Tier 2. The N2O emission factor (EF) of dairy cow manure management systems was determined at the national level and regional level as well. The results showed that the national cumulative N2O emission of manure management from 1990 to 2021 was 113.1million tons of CO2 equivalent, ranging from 90.3 to 135.9 million tons with an uncertainty of ±20.2%. The annual EF was 0.021 kg N2O-N (kg N)−1 for total emissions, while it was 0.014 kg N2O-N (kg N)−1 for direct emissions. The proportions of N2O emissions in North China, Northeast China, East China, Central and Southern China, Southwest China and Northwest China were 32.3%, 18.6%, 11.4%, 5.8%, 6.1% and 25.8%, respectively. In addition, N2O emissions varied among farms in different scales. The respective proportions of total N2O emissions from small-scale and large-scale farms were 64.8% and 35.2% in the past three decades. With the improvement in farm management and milk production efficiency, the N2O emissions per unit mass of milk decreased from 0.77 × 10−3 kg to 0.48 × 10−3 kg in 1990–2021. This study may provide important insights into compiling a GHG emission inventory and developing GHG emission reduction strategies for the dairy farming system in China.
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(This article belongs to the Section Ecosystem, Environment and Climate Change in Agriculture)
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Research on the Population Flow and Mixing Characteristics of Pelleted Vegetable Seeds Based on the Bonded-Particle Model
by
Jian Xu, Shunli Sun, Xiaoting Li, Zhiheng Zeng, Chongyang Han, Ting Tang and Weibin Wu
Agriculture 2024, 14(5), 752; https://doi.org/10.3390/agriculture14050752 - 11 May 2024
Abstract
In order to precisely reproduce the precise seeding process of the population in the air-suction seed-metering device, it is necessary to execute accurate modeling of seed particles using the bonded-particle model, in combination with the discrete element method (DEM) and computational fluid dynamics
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In order to precisely reproduce the precise seeding process of the population in the air-suction seed-metering device, it is necessary to execute accurate modeling of seed particles using the bonded-particle model, in combination with the discrete element method (DEM) and computational fluid dynamics (CFD). Through the repose angle, slope screening, rotating container, and particle sedimentation experiments, in this paper, the influence of the filling accuracy of the bonded-particle model on the flow behavior and mixing characteristics of the seed population was first explored based on EDEM software. The viability of the suggested modeling approach for pelleted vegetable seeds, as described in this study, was confirmed by comparing experimental and simulation outcomes. The surface roughness values obtained from the studies above were utilized to assess the accuracy of the bonded-particle model in filling. Additionally, a mathematical technique for determining the surface roughness was provided. Furthermore, an analysis of the multiple contacts in the bonded-particle model was also performed. The results indicated that the simulation results closely matched the experimental data when the number of sub-spheres in the bonded-particle model was equal to or more than 70, as measured by the standard deviation. In addition, the most optimal modeling scheme for the pelletized vegetable seed bonded-particles, based on the cost of coupling simulation, was found to be the bonded-particle surface roughness (BS) with a value of 0.1. Ultimately, a practical example was utilized to demonstrate the utilization of the pelleted vegetable seed bonded-particle model and the DEM-CFD coupling approach in analyzing the accuracy of the seeding process in the air-suction seed-metering device. This example will serve as a valuable reference point for future field studies.
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(This article belongs to the Section Agricultural Technology)
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