1. Introduction
Aquatic bird bornavirus 1 (ABBV-1) has been associated with chronic meningoencephalitis and ganglioneuritis in several species of migratory waterfowl (e.g., Canada geese, trumpeter swans, mute swans) throughout Canada and the United States [
1,
2]. ABBV-1 is a virus of the species
Waterbird 1 orthobornavirus, in the genus
Orthobornavirus, family
Bornaviridae and order
Mononegavirales [
3]. Bornaviruses (i.e., viruses in the family
Bornaviridae) have a non-segmented, negative-sense, single-stranded RNA genome, which is roughly 9 kb and contains six genes encoding five structural and one non-structural proteins: nucleoprotein (N), non-structural protein (X), phosphoprotein (P), matrix (M), glycoprotein (G), and RNA dependent RNA polymerase (large; L) [
4,
5].
Bornaviruses do not cause cell lysis, and rather induce a persistent infection through multiple mechanisms, including inhibition of the host immune response, negative regulation of cellular transcription by the viral X protein, and close associations with host chromosomes [
6,
7]. There is limited release of infectious virions during the replication cycle, and virus propagation mainly occurs by cell-to-cell spread, which is mediated by the G protein [
8]. Although primarily neurotropic in vivo, bornaviruses are able to establish persistent infection in a variety of cell types in vitro, typically without production of cytopathic effect (CPE) [
4,
9].
Viruses in the
Psittaciform 1 and
2 orthobornavirus species are the causative agents of proventricular dilatation disease (PDD) in psittacines (i.e., parrots and allies); a disease characterized by inflammation of the ganglia in the gastrointestinal (GI) tract, which causes impaired intestinal motility, leading to maldigestion, starvation, and ultimately death [
10]. Common microscopic lesions include lymphoplasmacytic perivascular cuffs in the peripheral and central nervous system [
10]. Pathological findings in ABBV-1-infected waterfowl are similar to what observed with PDD, although inflammation in the central nervous system appears to be more common compared to psittacines with PDD [
11].
While the typical host range of ABBV-1 includes geese and swans, ABBV-1 has been detected in birds taxonomically distinct from waterfowl, including eagles [
12], gulls [
13], and an emu [
14]. Histological lesions in some of these birds were consistent with what is reported in waterfowl. Similarly, other avian bornaviruses (i.e., bornaviruses isolated from birds) have been shown to have a broad host range, outside the common avian reservoirs. For instance, a Himalayan monal (
Lophophorus impejanus; order
Galliformes), presented with PDD-like clinical signs and post-mortem findings, tested positive for parrot bornavirus-4 (PaBV-4 genotype, in the
Psittaciform 1 orthobornavirus species) [
15].
Despite the high prevalence in waterfowl, and propensity to cause disease in multiple avian taxa, the ability of ABBV-1 to infect and cause disease in poultry species has not been evaluated. Infection and establishment of ABBV-1 in poultry is a hazard that could lead to potential economic losses. In this study, the ability of ABBV-1 to infect and replicate in cells of chicken- and waterfowl-origin was evaluated using both in vitro and in ovo models. First, replication kinetics of ABBV-1 were determined using multi- and single-step growth curves in primary embryo fibroblasts of chicken, duck, and goose. Second, embryonated eggs of chicken and duck species were inoculated into either the yolk or chorioallantoic cavity with ABBV-1, and embryos were harvested at mid or late embryonation. Lesion development in tissues was assessed by histopathology, and virus replication was evaluated by immunohistochemistry (IHC) and RT-qPCR for viral RNA.
2. Materials and Methods
2.1. Eggs and Cells
Fertilized White Leghorn chicken, Pekin duck, and Emden goose (in vitro only) eggs were respectively purchased from the White Leghorn chicken flock of the Canadian Food Inspection Agency (Ottawa, ON, Canada), King Cole Ducks Ltd. (Whitchurch-Stouffville, ON, Canada), and a local producer (ON, Canada). Chicken eggs were specific pathogen free (SPF). Eggs were incubated at 37.5 °C at 60–75% humidity and rotated every 2 h using a commercial incubator (GQF Manufacturing, Savannah, GA, USA).
Finite chicken, duck, and goose embryo fibroblasts (CEF, DEF, and GEF, respectively) were produced from embryos, using standard protocols [
16]. Briefly, at 11 days of embryonation (DOE) for chicken, and 13 DOE for duck and goose, eggs were decontaminated by submersion in 70% ethanol and the trunk of harvested embryos was minced and dissociated with 0.25% trypsin (HyClone, London, ON, Canada). The supernatant was then filtered through a 40-μm cell strainer (Corning, Corning, NY, USA), and fetal bovine serum (FBS; Wisent, QC, Canada) was added to a final concentration of 5% (
v/
v) to inactivate the trypsin. Cells were seeded onto T-175 flasks (Fisher, Mississauga, ON, Canada) and routinely passaged in maintenance media (Dulbecco’s modified Eagle’s medium (DMEM; Wisent) with 10% FBS and 1% penicillin/streptomycin/amphotericin (PSA; HyClone)) at 37 °C with 10% CO
2. All cell stocks were tested for presence of ABBV-1 by RT-qPCR at the Animal Health Laboratory (AHL), the provincial laboratory for animal health testing in Ontario.
2.2. Production of Virus Stock and Titration
ABBV-1 was harvested from persistently infected GEF (ABBV-GEF) using a freeze-thaw method [
9]. Cells grown in T-175 flasks with maintenance media were supplemented with 10 mM sodium butyrate (Fisher) for 48 h. Media was then removed and replaced with 10 mL of sterile double distilled water for 2 h at room temperature before freezing at −80 °C. After thawing, the remaining cells were scraped off the surface of the flask and virus-containing supernatant was transferred to a 50 mL centrifuge tube (Fisher) and vortexed for 30 s before being centrifuged at 2000×
g for 5 min to pellet cellular debris. The virus-containing supernatant was moved to a clean centrifuge tube and incubated overnight at 4 °C with shaking in a 1:2 ratio of polyethylene glycol 8000 (PEG8000; Fisher) with 0.4 M sodium chloride (Fisher) to supernatant. Virus was pelleted by centrifugation at 3500×
g for 15 min at 4 °C, and the pellet was re-suspended in phosphate buffered saline (PBS; Fisher) with 1% FBS, with a final ratio of 1:500.
Virus was titrated using 96-well plates and a tissue culture infectious dose 50% (TCID
50) assay in DEF, and immunofluorescence (IF; see below) was used for virus detection as previously described [
9]. The TCID
50 titre was calculated according to the Karber method, and converted to focus-forming units (FFU) by multiplying by 0.69 [
17]. Virus stock was stored in aliquots at −80 °C.
2.3. Immunofluorescence
Immunofluorescence was done as previously described [
9]. Briefly, cells were fixed and permeabilized with ice-cold methanol-acetone (1:1 ratio; Fisher) at −20 °C for 20 min, blocked for 1 h at room temperature in 5% normal goat serum (Sigma, St. Louis, MO, USA), and incubated overnight at 4 °C with a rabbit monospecific antibody against the ABBV-1 N protein (Pacific Immunology, Ramona, CA, USA), used at 1 μg/mL. Reaction was visualized using a goat-anti-rabbit secondary antibody conjugated with AlexaFluor488 (Thermo Fisher, Mississauga, ON, Canada) used at 1 μg/mL, with a DAPI counterstain (Fisher).
2.4. ABBV-1 Growth Curves
2.4.1. Multi-Step Growth Curves
An experimental outline of the multi-step growth curve can be found in
Supplemental Material Figure S1. A total of 0.1 × 106 CEF, GEF, and DEF were each plated into separate wells (
n = 3 for each species) of a 12-well plate (Fisher), and let to adhere overnight. The following day, cells were infected with ABBV-1 at a multiplicity of infection (MOI) of 0.01 with virus let to adsorb for 1 h before the inoculum was removed, at which point cells were rinsed 3 times with PBS and replenished with fresh maintenance media. One additional well per species was treated with an equivalent volume of PBS as a negative control. Cells were first passaged 2 days post-infection (dpi) and then every other day for the remaining course of the experiment. A 1:3 ratio was used for each passage, with 2/3 seeded into one well of a 6-well plate (Fisher) and the remaining 1/3 into one well of a 24-well plate (Fisher) to be tested by IF for ABBV-1 the following day, to determine the percentage of infected cells over time (see below). Overall, IF was conducted over 10 passages, corresponding to 3, 5, 7, 9, 11, 13, 15, 17, 19, and 21 dpi. At 21 dpi, remaining cells in each well were detached with trypsin, counted (Countess II Automated Cell Counter (Fisher)), and lysed by 3 cycles of freeze/thaw to release cell-associated virus. Clarified supernatant was titrated for presence of ABBV-1 by TCID50 as described above.
2.4.2. Single-Step Growth Curves
An experimental outline of the single-step growth curve can be found in
Supplemental Material Figure S2. A total of 0.05 × 10
6 CEF, GEF, and DEF were plated in separate wells of a 24-well plate (
n = 15 wells for each species) and let to adhere overnight. The following day, cells were infected with ABBV-1 at an MOI of 5 with virus let to adsorb for 1 h before inoculum was removed, at which point cells were then rinsed 3 times with PBS, and replenished with fresh maintenance media. Five additional wells per species were treated with an equivalent volume of PBS as a negative control. At 0, 1, 2, and 4 dpi, IF was used to detect the percentage of infected cells at each time point (see below). Cells in the remaining four wells per species (3 infected and one control) were split in a 1:3 ratio as described above, and IF for virus was carried out at 6, 10, 14, and 21 dpi
Supplemental Material Figure S2. At 21 dpi, remaining cells in each well were detached with trypsin, counted (Countess II Automated Cell Counter (Fisher)), and lysed by 3 cycles of freeze/thaw to release cell-associated virus. Clarified supernatant was titrated for presence of ABBV-1 by TCID
50 as described above.
2.4.3. Determining Percentage of Infected Cells
The number of ABBV-1 reactive cells was plotted over time to assess virus growth. For assessment of percentage of fluorescent cells, three pictures were taken per well at a 40× magnification (ZEISS Axio Observer.A1) using two channels (DAPI and FITC). For each picture, the total number of cells were counted using the DAPI (blue) channel, and the number of infected cells was determined by counting immunoreactive cells using the FITC channel (green). Therefore, considering three wells for each time point, the number of infected cells over the total number of cells per time point was determined by averaging the data from 9 pictures. Cell counting was assisted using ImageJ software (National Institute of Health, Bethesda, MD, USA).
2.5. In Ovo Inoculation and Tissue Harvest
2.5.1. Experimental Design
A diagram of the experimental plan for the in ovo experiment is shown in
Supplemental Material Figure S3. Eighty (
n = 80) fertilized eggs per species were obtained and incubated as described above. Half (
n = 40) were inoculated in the yolk sac and the other half in the chorioallantoic cavity. For each route, half of the embryos (
n = 20) were inoculated either with ABBV-1 or sterile PBS (control). On account of different developmental rates and times at hatch (i.e., 21 days for chickens and 28 days for ducks), inoculation and embryo harvest were carried out at different days of embryonation (DOE). Yolk inoculation was conducted at 5 DOE in chickens, and 8 DOE in ducks; allantoic inoculation was conducted at 9 DOE in chickens, and 12 DOE in ducks. Therefore, considering the inoculation route and inoculum type, for each species there were four groups, each of
n = 20 embryos (yolk/ABBV-1, yolk/PBS, chorioallantoic/ABBV-1, chorioallantoic/PBS). From each group,
n = 10 embryos were harvested at two time points: early and late embryonation. Early harvest was 11 DOE for chickens, 15 DOE for ducks; late harvest was 19 DOE for chickens, 24 DOE for ducks. Half of the embryos (
n = 5) sampled at each time point were used for histology/immunohistochemistry (IHC), and half for RNA extraction.
2.5.2. Inoculation and Tissue Harvest
Inoculation into the yolk and chorioallantoic sacs was conducted according to standard procedures and sterile techniques [
18], using 10
5 FFU of ABBV-1 in 0.1 mL of PBS with 1% FBS, or an equivalent volume of PBS. After inoculation, eggs were candled every day to assess embryo viability. Embryos that died the day after inoculation were discarded (death interpreted as a consequence of inoculation); embryos that died before harvesting time were regularly sampled as described below.
At the set time points described above, embryos were euthanized by refrigeration from 6 h to overnight prior to harvest; and the embryos were transferred into a sterile petri dish for dissection. Harvested tissues for RNA extraction and histology included vitelline membrane with yolk, brain, spinal cord, liver, proventriculus and ventriculus (P/V). Allantoic fluid was harvested for RNA extraction, and chorioallantoic membrane for histology. For RNA extraction, fluids and tissues were stored in screw cap tubes and frozen at −80 °C. For histology, tissues were fixed in 10% neutral buffered formalin for 48 h and then preserved in 70% ethanol until being embedded in paraffin wax and routinely processed for hematoxylin and eosin (HE) staining and IHC.
2.6. Histology and Immunohistochemistry
Histology was carried out on all sampled tissues for evaluation of lesions. IHC was only done on brain and spinal cord tissue from
n = 2 controls and
n = 3 ABBV-1 inoculated embryos per harvest time point. Nervous tissue was considered the mostly likely site of virus replication based on literature sources [
11]. IHC was conducted as reported previously [
19]. Briefly, after deparaffinization, sections were unmasked using Proteinase K and blocked according to the manufacturer’s instructions (Agilent Technologies, Mississauga, ON, Canada). The primary antibody was the same used for IF, and was applied onto the slides for 30 min at room temperature at 1:6000 dilution, followed by a polymer (Envision, Agilent Technologies) conjugated with peroxidase. Positive reaction was visualized using NovaRED chromogen (Vector Laboratories, Burlington, ON, Canada). Positive control sections derived from the brain of Canada geese (
Branta canadensis) naturally infected with ABBV-1 [
1].
2.7. RNA Extraction and RT-qPCR
RNA was extracted from 300 µL of allantoic fluid or yolk, or 300 mg of solid tissue (brain, liver, P/V) using TRIzol/chloroform after homogenization in a tissue homogenizer (Precellys; ESBE Scientific, Markham, ON, Canada) with 1.0 mm sterile glass beads. RNA was then purified using RNeasy Mini Kit (Qiagen, Toronto, ON, Canada). Viral RNA was detected from purified RNA using the Luna
® Universal One-Step RT-qPCR kit (New England BioLabs, Whitby, ON, Canada), as previously described [
9]. Forward (5′-ATGCACTTGCACTCTTAGAC-3′) and reverse (5′-TCCCCATAAAACCTCCCAAC-3′) primers were designed to target the ABBV-1 N gene along with a probe (5′-6FAM-CCCTGCCCGCAGAGAGAAATTCCAT-BHQ-3′) for detection. Reactions were prepared according to manufacturer instructions, with 100 ng of RNA template.
Viral RNA in tissues was quantitated using a standard curve, which was developed as follows. Virus was harvested from 1.0 × 106 ABBV-GEFs by 3 cycles of freeze/thaw, and released virus titrated by IF as described above. RNA was extracted from an equivalent number of cells using RNeasy Mini Kit (Qiagen), and 10-fold serial dilutions of RNA were used as template for RT-qPCR, using the same conditions previously described. The threshold cycle (i.e., Ct value) of each dilution was then plotted against the relative amount of FFU, to create a standard curve. Since total RNA was extracted from the whole amount of harvested samples (either 300 mg or 300 µL), the standard curve was further modified to plot Ct value versus FFU/mg or µL of sample. Samples were considered positive with Ct values ≤30.
2.8. Statistical Analysis
For the growth curves, differences between the means of the proportions of infected cells at each time point between species were assessed using a two-way analysis of variance (ANOVA), wherein the variables included species (i.e., type of cell) and time point, followed by a post-hoc Tukey’s test for multiple comparisons. To assess differences in virus titres between GEF, DEF, and CEF at the end of the growth curves, means of viral titres per one million cells were log10 transformed and tested by a two-tailed t-test.
For the in ovo experiment, differences between the proportion of positive/negative samples between species were determined using a Chi-squared test. All statistical analyses were conducted using GraphPad Prism 8.0 software (GraphPad, La Jolla, CA, USA).
4. Discussion
In this study, we assessed the replication kinetics of ABBV-1 in primary fibroblasts derived from chicken, duck, and goose embryos through multi- and single-step growth curves; and used an in ovo experimental infection model to determine the ability of ABBV-1 to replicate and cause lesions in chicken and duck embryos. Compared to CEF, GEF and DEF could best support ABBV-1 replication and establishment of persistent infection. Multi-step growth curves showed that ABBV-1 is not able to spread in CEF, while single-step growth curves showed that CEF could be infected, but could not sustain ABBV-1 persistent infection. In ovo inoculation showed that regardless of host, inoculation route, or harvest time, ABBV-1 fails to replicate or cause lesions in the tested embryonic tissues.
Infection of GEF and DEF with a low MOI resulted in growth kinetics characterized by an initial slow growth, followed by exponential increase of infected cells and a plateau reached by the end of experiment, indicating infection of all cells in the population. This kinetic is similar to what is described with Borna disease virus (BoDV-1), which commonly reaches a plateau in infected cells between 15 and 30 dpi in hippocampal neurons and Vero cells, respectively [
21,
22]. In our study, infection of CEF with a low MOI yielded no IF-positive cells over the 21-day duration of the experiment. Studies with Estrildid finch bornavirus-1 (EsBV-1) has indicated that establishment of a persistent infection, where all cells are infected, can take up to several months [
23]. In the present study, all cells were primary embryo fibroblasts, and experiments were not protracted for greater numbers of passages due to cellular senescence. Although no immunoreactivity in CEF infected with ABBV-1 was observed at low MOI, virus replication may have been present at very low levels, detectable only by a more sensitive method, such as RT-qPCR. Indeed, immortalized chicken embryo fibroblasts (DF1) had detectable levels of ABBV-1 RNA upon infection without any immunoreactivity noticed by IF [
9].
In single-step curves, ABBV-1 replicated in GEF and DEF with a trend similar to what seen in multi-step growth curves, albeit at a much faster rate, and were able to maintain an infected state for three weeks (i.e., persistent infection). Similar to GEF and DEF, CEF also rapidly became infected upon inoculation with ABBV-1 at a high MOI, however the intensity of fluorescence signal and amount of positive cells decreased with the number of passages. The initial burst of replication is likely due to infection with an overwhelming amount of virus, followed by decreasing replication rates, possibly caused by poor adaptation of ABBV-1 to the chicken host.
Differences in the staining pattern between CEF and the other cells were seen by immunofluorescence. CEF showed both nuclear and cytoplasmic reactivity initially, which at later time points became predominately nuclear, while in the other cells signal appeared to be both cytoplasmic and nuclear. In BoDV-1, the nucleoprotein has been shown to exist as two different isomers: p40, which is nuclear, and p38, which is cytoplasmic and transcribed without the N-terminal nuclear localization signal [
24]. Both isoforms are critical for nucleo-cytoplasmic shuttling of viral RNA, and are essential for BoDV-1 replication [
25,
26]. The lack of cytoplasmic staining seen in CEF at later time points may indicate inefficient replication. There was no measurable infectious virus produced by infected CEF in spite of the presence of immunoreactive nuclei. Absent cytoplasmic reactivity may be due to impaired nucleocytoplasmic shuttling of the nucleoprotein, although the two isoforms have yet to be shown to exist in avian bornaviruses.
The differential growth of ABBV-1 in the cell cultures of the present work are likely to be explained by species-specific differences in the innate immune response, or permissivity to virus replication. Future research will need to address the differences in expression of antiviral genes that are activated upon ABBV-1 infection. Additionally, the use of neural cell lines might provide a more realistic understanding of replication kinetics, however the use of the fibroblast model to address the question of host range appears appropriate, considering that goose and duck fibroblasts were able to be infected and establish a persistent infection.
In order to better answer ABBV-1 host restriction, we also attempted infection of embryonated eggs. In ovo models are used frequently in virology for both virus propagation and pathogenesis studies. Inoculation of embryonated eggs into the allantoic cavity is a common method for growing influenza virus and Newcastle disease virus (NDV), where the virus infects the chorioallantoic membrane (CAM), replicates, and is released back into the allantoic fluid [
27,
28]. In cases with mesogenic and velogenic NDV, the virus is capable of infiltrating through the outermost epithelial layer of CAM to access the blood, and become systemically distributed throughout embryonic tissues [
29]. Yolk sac inoculation is less common, but has been utilized as a route to isolate and grow Marek’s disease virus (
Gallid alphaherpesvirus 2;
GaHV-2) and Coxsackie virus [
30,
31]. In these cases, the virus infiltrates the yolk sac membrane before distributing throughout the embryo. In the present study, there were only two samples that tested positive for viral RNA by RT-qPCR: a yolk-inoculated early harvest chicken brain, and a yolk-inoculated late harvest duck yolk. Both samples had Ct values barely above the cut-off threshold, and had estimated viral titres less than 1 FFU/mg of tissue. ABBV-1 may not be able to infiltrate the vitelline or chorioallantoic membrane to get to a permissive cell or tissue (i.e., neurons, nervous tissue) and subsequently degraded, resulting in the majority of samples testing negative. The two samples that were positive had low estimated titres, suggesting that these likely represent remnants of the initial inoculum.
In addition to RT-qPCR, virus replication was evaluated by IHC using a monospecific antibody against the ABBV-1 N protein, in both the brain and spinal cord of inoculated embryos. In naturally infected Canada geese, brains show scattered immunoreactivity for ABBV-1 in the nuclei of both neurons and glial cells [
1]. In the present study, immunoreactivity was not observed in any samples. This corroborates the finding from the RT-qPCR results, and the claim that the two weak positives likely represent a low-level contamination.
Microscopic lesion development was assessed in multiple embryonic tissues. The two most common lesions documented with avian bornavirus infections in multiple avian species (including ABBV-1 infection in waterfowl) include lymphoplasmacytic infiltration of the peripheral ganglia and perivascular cuffs of mononuclear cells in the CNS [
1]. No lesions were observed in the central and peripheral nervous tissue, as well as other organs, in any of the tissues from ABBV-1- or mock-inoculated embryos. As bornaviruses do not cause direct cell lysis, lesion development is believed to be a consequence of inflammation mediated by the cell-mediated immune response of the host [
10]. The lack of a fully-functioning immune system in the developing embryo [
32] could explain the absence of lesions observed in the embryonic tissues of this study. Overall, lack of lesions and the negative IHC and RT-qPCR results, suggest that ABBV-1 did not spread or replicate in embryonic tissues, and did not elicit lesion development.
For a cell-associated virus, the nervous tissue (i.e., the site of ABBV-1 replication) might have been inaccessible from a distant site of inoculation (i.e., chorioallantoic and vitelline sac). Additionally, the incubation time before hatch might have been too short for ABBV-1 to fully replicate in tissues. In fact, experimental inoculation of cockatiels with brain homogenate from an African gray parrot infected with PaBV-4 failed to show clinical signs until 21 days after infection, and, in another study, cockatiels inoculated with PaBV-4 did not develop clinical signs for 110 days [
33,
34].