Roles of ITPA and IL28B Genotypes in Chronic Hepatitis C Patients Treated with Peginterferon Plus Ribavirin
Abstract
:1. Introduction
2. Results
2.1. Patient Characteristics According to IL28B and ITPA Genotypes
Study variables | Total (n = 97) |
---|---|
Age (years) | 55.1 ± 10.8 |
Gender (male/female) | 44/53 |
SNP genotype | |
IL28B rs8099917 TT/TG/GG | 60/35/2 |
ITPA rs1127354 CC/CA/AA | 74/21/2 |
ITPA rs6051702 AA/AC/CC | 59/32/6 |
Response to previous therapy | |
Naïve/relapse/null response | 67/17/13 |
HCV RNA (H/L) | 95/2 |
HCV genotype (G1/G2) | 81/16 |
AST (IU/L) | 56.0 ± 49.4 |
ALT (IU/L) | 67.9 ± 62.4 |
γGTP (IU/L) | 53.5 ± 73.2 |
WBC (/mm3) | 5,410 ± 1,640 |
Hemoglobin (g/dL) | 14.0 ± 1.1 |
Platelets (×104/mm3) | 17.5 ± 5.1 |
History of diabetes mellitus (+/−) | 15/82 |
US (CLD/cirrhosis/unknown) | 83/12/2 |
Treatment Response | |
RVR (+/−/unknown) | 14/82/1 |
EVR (+/−) | 52/45 |
SVR (+/relapser/null/unknown) | 40/27/22/8 |
2.2. Treatment Response According to IL28B and ITPA Genotypes
Study variables | IL28B rs8099917 | ITPA rs1127354 | ITPA rs6051702 | ||||||
---|---|---|---|---|---|---|---|---|---|
TT | TG/GG | P-value | CC | CA/AA | P-value | AA | AC/CC | P-value | |
No. of patients | 60 | 37 | 74 | 23 | 59 | 38 | |||
Age (years) | 55.7 ± 11.2 | 54.7 ± 10.1 | N.S. | 56.8 ± 9.7 | 49.6 ± 12.2 | 0.0043 | 55.6 ± 11.3 | 54.4 ± 9.9 | N.S. |
Gender (male/female) | 25/35 | 19/18 | N.S. | 29/45 | 15/8 | 0.0511 | 29/30 | 15/23 | N.S. |
Response to previous therapy (naïve/relapse/null response) | 46/10/4 | 21/7/9 | 0.029 | 48/17/9 | 19/0/4 | N.S. | 40/12/7 | 27/5/6 | N.S. |
HCV RNA (H/L) | 58/2 | 37/0 | N.S. | 73/1 | 22/1 | N.S. | 58/1 | 37/1 | N.S. |
HCV genotype (G1/G2) | 49/11 | 32/5 | N.S. | 63/11 | 18/5 | N.S. | 48/11 | 33/5 | N.S. |
AST (IU/L) | 53.3 ± 56.2 | 60.3 ± 36.0 | N.S. | 52.8 ± 31.9 | 66.2 ± 84.4 | N.S. | 51.6 ± 30.1 | 62.8 ± 69.5 | N.S. |
ALT (IU/L) | 62.4 ± 65.3 | 76.9 ± 57.0 | N.S. | 62.3 ± 48.5 | 85.7 ± 93.5 | N.S. | 62.4 ± 47.5 | 76.4 ± 80.2 | N.S. |
γGTP (IU/L) | 35.5 ± 34.5 | 82.8 ± 104 | 0.0016 | 55.1 ± 80.9 | 48.7 ± 40.1 | N.S. | 51.6 ± 72.1 | 56.5 ± 75.6 | N.S. |
WBC (/mm3) | 5580 ± 1820 | 5140 ± 1260 | N.S. | 5390 ± 1630 | 5470 ± 1680 | N.S. | 5570 ± 1690 | 5160 ± 1540 | N.S. |
Hb (g/dL) | 13.9 ± 1.1 | 14.3 ± 1.1 | N.S. | 13.9 ± 1.0 | 14.3 ± 1.2 | N.S. | 14.0 ± 1.1 | 14.0 ± 1.1 | N.S. |
Platelets (×104/mm3) | 17.9 ± 5.3 | 16.8 ± 5.0 | N.S. | 17.4 ± 5.4 | 17.7 ± 4.3 | N.S. | 17.8 ± 5.4 | 17.0 ± 4.7 | N.S. |
History of diabetes mellitus (+/−) | 9/51 | 7/30 | N.S. | 11/63 | 4/19 | N.S. | 8/51 | 7/31 | N.S. |
US (CLD/cirrhosis/unknown) | 51/8/1 | 32/4/1 | N.S. | 62/10/2 | 21/2 | N.S. | 50/8/1 | 33/4/1 | N.S. |
Study variables | IL28B rs8099917 | ITPA rs1127354 | ITPA rs6051702 | ||||||
---|---|---|---|---|---|---|---|---|---|
TT | TG/GG | P-value | CC | CA/AA | P-value | AA | AC/CC | P-value | |
No. of patients | 60 | 37 | 74 | 23 | 59 | 38 | |||
RVR (+/−/unknown) | 12/47/1 | 2/35/0 | 0.085 | 10/63/1 | 4/19/0 | N.S. | 10/49/0 | 4/33/1 | N.S. |
EVR (+/−) | 43/17 | 9/28 | 0.000014 | 36/38 | 16/17 | N.S. | 31/28 | 21/17 | N.S. |
SVR (+/Relapser/Null/unknown) | 29/6/18/7 | 11/16/9/1 | 0.042 | 28/17/22/7 | 12/5/5/1 | N.S. | 27/13/16/3 | 13/9/11/5 | N.S. |
2.3. Ribavirin-Induced Anemia According to IL28B and ITPA Genotypes
2.4. Association Between ITPA rs1127354 Genotype and Dose Reduction of Drugs During Treatment
Study variables | ITPA rs1127354 major type | ITPA rs1127354 minor type |
---|---|---|
A | ||
Dose reduction (+) | 17 | 4 |
Dose reduction (−) | 57 | 19 |
B | ||
Dose reduction (+) | 22 | 0 |
Dose reduction (−) | 52 | 23 |
2.5. Effects of IL28B and ITPA Genotypes on the Reduction of White Blood Cell/Neutrophil Count
2.6. Effects of IL28B and ITPA Genotypes on the Reduction of Platelet Count
3. Experimental Section
3.1. Patients
3.2. Treatment
3.3. HCV RNA Quantification
3.4. HCV Genotyping
3.5. Classification of Treatment Outcome
3.6. DNA Extraction and TaqMan SNP Assay
3.7. Statistical Analysis
4. Discussion and Conclusion
Acknowledgments
Conflict of Interest
References and Notes
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Miyamura, T.; Kanda, T.; Nakamoto, S.; Wu, S.; Jiang, X.; Arai, M.; Fujiwara, K.; Imazeki, F.; Yokosuka, O. Roles of ITPA and IL28B Genotypes in Chronic Hepatitis C Patients Treated with Peginterferon Plus Ribavirin. Viruses 2012, 4, 1264-1278. https://doi.org/10.3390/v4081264
Miyamura T, Kanda T, Nakamoto S, Wu S, Jiang X, Arai M, Fujiwara K, Imazeki F, Yokosuka O. Roles of ITPA and IL28B Genotypes in Chronic Hepatitis C Patients Treated with Peginterferon Plus Ribavirin. Viruses. 2012; 4(8):1264-1278. https://doi.org/10.3390/v4081264
Chicago/Turabian StyleMiyamura, Tatsuo, Tatsuo Kanda, Shingo Nakamoto, Shuang Wu, Xia Jiang, Makoto Arai, Keiichi Fujiwara, Fumio Imazeki, and Osamu Yokosuka. 2012. "Roles of ITPA and IL28B Genotypes in Chronic Hepatitis C Patients Treated with Peginterferon Plus Ribavirin" Viruses 4, no. 8: 1264-1278. https://doi.org/10.3390/v4081264
APA StyleMiyamura, T., Kanda, T., Nakamoto, S., Wu, S., Jiang, X., Arai, M., Fujiwara, K., Imazeki, F., & Yokosuka, O. (2012). Roles of ITPA and IL28B Genotypes in Chronic Hepatitis C Patients Treated with Peginterferon Plus Ribavirin. Viruses, 4(8), 1264-1278. https://doi.org/10.3390/v4081264