Proteopeptidomic, Functional and Immunoreactivity Characterization of Bothrops moojeni Snake Venom: Influence of Snake Gender on Venom Composition
Abstract
:1. Introduction
2. Results and Discussion
2.1. Functional and Cytotoxic Characterization
2.2. Immunoreactivity Characterization
2.3. Proteomic Analyses
2.3.1. Fractionation by Reversed-Phase High-Performance Liquid Chromatography (HPLC) and Matrix Assisted Laser Desorption Ionization-Time of Flight (MALDI-TOF) Mass Spectrometry
2.3.2. Analysis in the AmaZon Speed electron transfer dissociation (ETD) Ion Trap Mass Spectrometer
2.3.3. Shotgun Proteomics on Q-Exactive Orbitrap Mass Spectrometer
Analysis Against the Transcriptome Database
Analysis Against Uniprot Database
3. Discussion
4. Methods
4.1. Chemicals and Materials
4.2. Venoms
4.3. Functional Characterization
4.3.1. L-Amino Acid Oxidase (LAAO) Activity
4.3.2. Hyaluronidase Activity
4.3.3. Metalloproteinase Activity
4.3.4. Phospholipase Activity
4.3.5. Serine Protease Activity
4.4. Cytotoxicity Assay
4.5. Immunoreactivity Characterization
4.5.1. Western Blotting
4.5.2. Enzyme-Linked Immunosorbent Assay (ELISA)
4.6. Statistical Analyses
4.7. Fractionation of Crude Venom by Reversed-Phase High-Performance Liquid Chromatography (HPLC)
4.8. Proteomics Analyses
4.8.1. Matrix Assisted Laser Desorption Ionization-Time of Flight (MALDI-TOF) Mass Spectrometry
4.8.2. Analysis in the AmaZon Speed ETD Ion Trap Mass Spectrometer
4.8.3. Shotgun Proteomics Using the Q-Exactive Orbitrap Mass Spectrometer
Supplementary Materials
Author Contributions
Acknowledgments
Conflicts of Interest
References
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Accession | −10lgP | Coverage (%) | Number of Peptides | Number of Unique Peptides | Average Mass | Description |
---|---|---|---|---|---|---|
ATU85535.1 | 489.98 | 93 | 316 | 316 | 56,840 | L-amino acid oxidase |
ATU85523.1 | 426.4 | 94 | 164 | 164 | 24,669 | Snake venom metalloproteinase BmooMPalpha-I-like isoform |
ATU85528.1 | 376.13 | 88 | 71 | 71 | 15,699 | Basic phospholipase A2 myotoxin |
ATU85541.1 | 334.57 | 85 | 35 | 35 | 26,837 | Cysteine-rich secretory protein Moojin |
ATU85526.1 | 322.31 | 54 | 43 | 43 | 63,875 | Phospholipase B |
ATU85531.1 | 272.92 | 61 | 23 | 23 | 16,334 | Snake venom vascular endothelial growth factor toxin |
ATU85542.1 | 172.96 | 16 | 7 | 7 | 52,550 | Hyaluronidase BmooHyal-1 |
ATU85551.1 | 172.41 | 38 | 4 | 4 | 9767 | Waprin 1 |
ATU85533.1 | 109.82 | 30 | 5 | 4 | 16,657 | C-type lectin isoform 1 |
Statistics Data | ||
BmooM | BmooF | |
Number of MS scans | 6676 | 6586 |
Number of MS/MS scans | 42,843 | 39,953 |
Statistics of filtered result | ||
Peptide-Spectrum Matches | 12,453 | 9421 |
Peptide Sequences | 3148 | 3349 |
Protein Groups | 142 | 206 |
Proteins | 191 | 252 |
Proteins (number of Unique Peptides) | 103 (>2); 88 (=2); 0 (=1) | 149 (>2); 103 (=2); 0 (=1) |
De novo Only Spectra | 1445 | 1040 |
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Amorim, F.G.; Costa, T.R.; Baiwir, D.; De Pauw, E.; Quinton, L.; Sampaio, S.V. Proteopeptidomic, Functional and Immunoreactivity Characterization of Bothrops moojeni Snake Venom: Influence of Snake Gender on Venom Composition. Toxins 2018, 10, 177. https://doi.org/10.3390/toxins10050177
Amorim FG, Costa TR, Baiwir D, De Pauw E, Quinton L, Sampaio SV. Proteopeptidomic, Functional and Immunoreactivity Characterization of Bothrops moojeni Snake Venom: Influence of Snake Gender on Venom Composition. Toxins. 2018; 10(5):177. https://doi.org/10.3390/toxins10050177
Chicago/Turabian StyleAmorim, Fernanda Gobbi, Tassia Rafaela Costa, Dominique Baiwir, Edwin De Pauw, Loic Quinton, and Suely Vilela Sampaio. 2018. "Proteopeptidomic, Functional and Immunoreactivity Characterization of Bothrops moojeni Snake Venom: Influence of Snake Gender on Venom Composition" Toxins 10, no. 5: 177. https://doi.org/10.3390/toxins10050177
APA StyleAmorim, F. G., Costa, T. R., Baiwir, D., De Pauw, E., Quinton, L., & Sampaio, S. V. (2018). Proteopeptidomic, Functional and Immunoreactivity Characterization of Bothrops moojeni Snake Venom: Influence of Snake Gender on Venom Composition. Toxins, 10(5), 177. https://doi.org/10.3390/toxins10050177