Single-Cell Analysis of CHO Cells Reveals Clonal Heterogeneity in Hyperosmolality-Induced Stress Response
Abstract
:1. Introduction
2. Materials and Methods
2.1. Cell Culture Maintenance
2.2. Stage Batch Cultivation in Shakers
2.3. Microfluidic Single-Cell Cultivation
2.4. Single-Cell Diameter Analysis
2.5. Mitochondrial Mass Assessment
2.6. Mitochondrial Activity Assessment
2.7. Relative mtDNA Copy-Number Analysis via qPCR
2.7.1. DNA Extraction
2.7.2. Primers
2.7.3. qPCR Settings and Experiment
2.7.4. Data Analysis
2.8. FUCCI-Transduced CHO DP-12 Cells-Based Cell Cycle Assessment
2.9. Flow Cytometry
2.10. Statistical Analysis
2.11. Growth Rate and Doubling Time (td) Calculation
3. Results and Discussion
3.1. Influence of Hyperosmolality on Cell Growth
3.2. Influence of Hyperosmolality on Cell Diameter
3.2.1. Populational Observation of Cell Diameter Dynamics
3.2.2. Single-Cell Analysis Reveals Heterogeneity in Response to Hyperosmolality
3.3. Influence of Hyperosmolality on Mitochondria
3.4. Cells Accumulate in the Late G1 Phase without Entering Mitosis upon Oversupplemented Feed Exposure
4. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Appendix A
Intercept | Intercept | Slope | Slope | Statistics | |
---|---|---|---|---|---|
Value | Std Error | Value | Std Error | Adj. R-Square | |
Linear fit parameters, high-glucose feed | |||||
300 mOsm/kg | 1.01148 | 0.01283 | 0.03374 | 0.00181 | 0.96636 |
370 mOsm/kg | 1.03204 | 0.00772 | 0.01142 | 4.90 × 10−4 | 0.95248 |
460 mOsm/kg | 1.01358 | 0.00742 | 0.00991 | 3.64 × 10−4 | 0.9547 |
530 mOsm/kg | 1.03775 | 0.00653 | 0.00326 | 2.39 × 10−4 | 0.79675 |
Linear fit parameters, high-mannitol feed | |||||
300 mOsm/kg | 1.02563 | 0.01405 | 0.01684 | 0.00133 | 0.89788 |
370 mOsm/kg | 1.05082 | 0.00945 | 0.01661 | 8.97 × 10−4 | 0.94995 |
460 mOsm/kg | 1.01276 | 0.00705 | 0.00924 | 4.04 × 10−4 | 0.94572 |
530 mOsm/kg | 1.00536 | 0.00343 | 0.00512 | 1.48 × 10−4 | 0.96777 |
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Condition | Spent Medium * | TCX6D w/6 mM Gln | 80% High-Glucose or High-Mannitol Feed + 20% TCX6D w/6 mM Gln |
---|---|---|---|
300 mOsm/kg (control) ** | 50% v/v | 50% v/v | - |
370 mOsm/kg | 50% v/v | 16.65% v/v | 33.3% v/v |
460 mOsm/kg | 50% v/v | 33.3% v/v | 16.65% v/v |
530 mOsm/kg | 50% v/v | - | 50% v/v |
Primer | Sequence (5′ to 3′) | Genome Region |
---|---|---|
mt16srRNA (for) | TATCCTGACCGTGCAAAGGTA | 1999–2134 bp |
mt16srRNA (rev) | AGGTTATTCCAGCCTCTTCACTG | |
refB2m (for) | CTTGGGCTCCTTCAGAGTGG | 178,645–178,693 bp |
refB2m (rev) | TGGACAAAGTCGAGCTGTCA |
Cultivation | Doubling Times according to Osmolality Stage and Reagent [h] | |||
---|---|---|---|---|
300 mOsm/kg | 370 mOsm/kg | 460 mOsm/kg | 530 mOsm/kg | |
CHO DP-12 Man | 21.37 | 21.7 | 28.78 | 67.98 |
CHO DP-12 Glc | 21.12 | 24.42 | 50.27 | 862.02 |
DP-12 FUCCI Man | 19.3 | 19.67 | 24.26 | 48.54 |
DP-12 FUCCI Glc | 21.68 | 24.24 | 35.76 | 195.32 |
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Romanova, N.; Schmitz, J.; Strakeljahn, M.; Grünberger, A.; Bahnemann, J.; Noll, T. Single-Cell Analysis of CHO Cells Reveals Clonal Heterogeneity in Hyperosmolality-Induced Stress Response. Cells 2022, 11, 1763. https://doi.org/10.3390/cells11111763
Romanova N, Schmitz J, Strakeljahn M, Grünberger A, Bahnemann J, Noll T. Single-Cell Analysis of CHO Cells Reveals Clonal Heterogeneity in Hyperosmolality-Induced Stress Response. Cells. 2022; 11(11):1763. https://doi.org/10.3390/cells11111763
Chicago/Turabian StyleRomanova, Nadiya, Julian Schmitz, Marie Strakeljahn, Alexander Grünberger, Janina Bahnemann, and Thomas Noll. 2022. "Single-Cell Analysis of CHO Cells Reveals Clonal Heterogeneity in Hyperosmolality-Induced Stress Response" Cells 11, no. 11: 1763. https://doi.org/10.3390/cells11111763