Tfeb-Mediated Transcriptional Regulation of Autophagy Induces Autosis during Ischemia/Reperfusion in the Heart
Abstract
:1. Introduction
2. Materials and Methods
2.1. Ischemia/Reperfusion In Vivo
2.2. Measurement of Infarct Size
2.3. Cardiomyocyte Cultures
2.4. Viability of the Cells
2.5. Tat-Beclin 1
2.6. Electron Microscopy
2.7. Real-Time Quantitative Polymerase Chain Reaction (qPCR)
2.8. Immunoblot Analyses
2.9. Immunostaining Analysis
2.10. Statistical Analysis
3. Results
3.1. The Tfeb-Mediated Autophagy–Lysosome Pathway Is Persistently Upregulated during I/R
3.2. Tfeb Facilitates Tat-Beclin 1-Induced Autosis in Neonatal Rat Cardiomyocytes (NRCMs)
3.3. Persistent Activation of Tfeb Triggers Accumulation of Autophagic Vacuoles and Autosis during I/R
3.4. Acute Activation of Tfeb by 3,4-Dimethoxychalcone Aggravates Myocardial Infarction (MI) Caused by I/R
4. Discussion
Author Contributions
Funding
Institutional Review Board Statement
Conflicts of Interest
References
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Gene Symbol | Sense (5′→3′) | Antisense (5′→3′) |
---|---|---|
Akt1 | GCTTCTATGGTGCGGAGATT | CTTGTCCAGCATGAGGTTCT |
Ambra1 | ATACTACGCCCAGAGGATGA | GAAGAAGAGGAGGTGGAAGAAC |
App | TCTCTGTCCCTGCTCTACAA | CAAGACATCGTCGGAGTAGTTC |
Atg10 | CGAGCGGGTTCTCATTAACA | TCCTTGGCTGTTCTCCATTC |
Atg12 | AGCTCTTCAGTCCTGTCATTTC | ACTCCTGGTTCACTCTTCCT |
Atg16l1 | TGTGTGTGTGTGAGGAAAGG | GCAGTGATGCAGGGTAAAGA |
Atg16l2 | CGAGACAACACACTCAAGGTTA | CAGCTTTGGTCCAGTCAGAA |
Atg3 | CCGGTCCTCAAGGAATCAAA | GTTGGACAGTGGTGGACTAAG |
Atg4a | GAAACGAGGGCATTTGGAAAG | ACCTGAAAGGGTGGAGTAGTA |
Atg4b | CAGATGCAGCAGCTCTAAGT | GGGACAAGATATGGGAGAGAAAG |
Atg4c | GCGGAGTCTTCTATGAGGAATG | GGAAGGAAGGAAGGAAGGAAAG |
Atg4d | CCTGGTCTTGTTGTCTCACTAC | TTCCGCTGGTCCAACTAATC |
Atg5 | CAGGTGATGATTCACGGGATAG | GGAGGACACACTCTTTCAATCT |
Atg7 | TCCTGAGAGCATCCCTCTAAT | GGCTCGACACAGATCATCATAG |
Atg9a | GACATCTACCATCGCATCCTAC | GGGTGAAGAAGACAACCTCTC |
Atg9b | GATGACAGGCCCAGGATATTT | GCCAGGCTAGTGTTCTCTTATC |
Bcl2 | GAGCAGGTGCCTACAAGAAA | CTTTGTCCTCTGACTGGGTATG |
Bcl2l1 | CTGGTTGAGCCCATCTCTATT | CTGACTCCAGCTGTATCCTTTC |
Becn1 | CAGGAACTCACAGCTCCATTAC | CCATCCTGGCGAGTTTCAATA |
Bnip3 | TCCAGCCTCCGTCTCTATTT | CTGTCACAGTGAGAACTCTTGG |
Cdkn1b | CCTTCCGCCTGCAGAAAT | CTGACTCGCTTCTTCCATATCC |
Cdkn2a | CATGTTGTTGAGGCTAGAGAGG | CACCGTAGTTGAGCAGAAGAG |
Cln3 | CCACCTGTCCCAGACTTTAATC | CCGCAGAACTTCCCATAACA |
Ctsb | CATGCACTGGAGAAGGAGATAC | CTGTTAGACACGCTGTAGGAAG |
Ctsd | CCTGGGCGATGTCTTCATT | GTGGAGAAGGAGCAAGTTAGAG |
Ctss | GGGAGACATGACCAATGAAGAA | TGTCAGGCAATGTCCGATTAG |
Cxcr4 | CTGCCCACCATCTACTTCATC | CGTCATGCTCCTTAGCTTCTT |
Dapk1 | CAACAGGGCTTCTAGGGATTT | AGCTCCCGAAGTTTGGATATAAG |
Dram1 | CAGATCCAAGTCAGGGAGAAAG | CAGGCATTGATAGGAGCAGATAA |
Dram2 | TGGTAGTGCACGCCTTTAAT | CTGTCCTGGAACTCATTCTGTAG |
Eif2ak3 | CCCAGGCATTGTGAGGTATT | CCAGTCTGTGCTTTCGTCTT |
Eif4g1 | GCTACAAGCACTCTATGCTCTC | CTTCACCACGTCCTCATCATATAG |
Esr1 | CTTGGAAGGCCGAAATGAAATG | GGCAGGGCTATTCTTCTTAGTG |
Gaa | CCAATTCCTCTCCACACACTAC | TTGAGCGGGAGATCACAAAG |
Gabarap | CTCCTTCCTTGACATCCAGTTC | GGAGAGACAGCCTCAAACATTA |
Gabarapl1 | CCTAACCTCTGTCTCCATACCT | GAATGTCTCCTGCCACAACT |
Gabarapl2 | GCACTGTCCTCATGGCTATT | CACACCTACCTCCCTTCATTAC |
Hdac1 | GCTGCTCAACTATGGTCTCTAC | CACTGTGGTACTTGGTCATCTC |
Hdac6 | GACCTGTCTACCTGGTGTTATG | GCAGTGTGGTCTGGGATTTA |
Hgs | TGAGGAGAAAGAGAGGATGAGA | GTTCACAGGCGAGGAATACA |
Hsp90aa1 | GACGAGATGGTTTCTCTGAAGG | TTCCACAAAGGCGGAGTTAG |
Hspa8 | ACTCCTCTTTCCCTTGGTATTG | GTCAGAGTAGGTGGTGAAAGTC |
Ifng | CTCTTCCTCATGGCTGTTTCT | TTCTTCCACATCTATGCCACTT |
Igf1 | CAGAAGAGGGAGAGAGAGAGAA | TAGCAAGCAGAAGAGGGATTTAG |
Ins2 | CCCTAAGTGATCCGCTACAATC | CAGGGCCATGTTGAAACAATAA |
Irgm1 | CGAAGACCAGAAGCTGAAAGA | CCGGATGTTGAGAGATGAGATG |
Lamp1 | GACCCTGAAAGTGGAGAACAA | GGGCATCAGGAAGAGTCATATT |
Map1lc3a | GTCTACGCCTCCCAAGAAAC | GGTGTCACATCTCTGCCTAATC |
Map1lc3b | CGCATGCCTTTAGCCTTTAATC | CCTGGAACTCACTTTGTAGACC |
Mapk14 | GAAAGCAGGGACCTTCTCATAG | GTGCTCAGGACTCCATTTCTT |
Mapk8 | TCCAGCACCCATACATCAAC | CTATTGTGTGCTCCCTCTCATC |
Mtor | CGGGACTACAGAGAGAAGAAGA | CATCAACGTCAGGTGGTCATAG |
Nfkb1 | GGGATTTCGATTCCGCTATGT | GACCTGTGGGTAGGATTTCTTG |
Npc1 | GAGCAGATCCTGTCTGCATTAT | CTGGTGTATCCGTGAAGTGTT |
Pik3c3 | CCTGATGCCTGGCTCAATAA | TAACTTCTGGACACCCTCTCT |
Pik3cg | GTACCCTGGTGATCGAGAAATG | ATGGTTTCGTTGGATAGGACTG |
Pik3r4 | AGGTTCTGGGACTTGGTTTC | GACCTCGGTGCCTTCTATTATC |
Prkaa1 | TGGCTGGGTGTGTAAAGATATG | CATGTCAGAGCCCACAATGA |
Pten | CAGTGAATGCCATCACCATTTC | CTGGGCTTAAGGTCTGATTCTC |
Rab24 | ATCTGGCCCAGTGGAATTAG | GTGAGAGGCACCTGGAATAG |
Rb1 | CCTCCTACCTTGTCACCAATAC | GTTACCTCCAGGAATCCGTAAG |
Rgs19 | TGCGAGAAGGCATCAATAGG | GGAGTAATAGAGAGCGGTAGGT |
Rps6kb1 | AGAGATGGGTCAGGGTTAAGA | TTCAGGTTCCCAGGAAGTAAAG |
Snca | TGACAACAGTGGCTGAGAAG | CCAGTGGCAGCAGCTATATT |
Sqstm1 | CTCTGGACACGATCCAGTATTC | CTGCTCTACGTGATGCAACTA |
Tgfb1 | GGTGGTATACTGAGACACCTTG | CCCAAGGAAAGGTAGGTGATAG |
Tgm2 | CATCACCAGCACTCTGTATCTC | GGTTCCTTCGGTTCCTTCAT |
Tmem74 | TGCTCCAAGACAGTGCTATTC | GTTCCTGGCTGCAACAATTAC |
Tnf | TTGTCTACTCCCAGGTTCTCT | GAGGTTGACTTTCTCCTGGTATG |
Tnfsf10 | CAGCCCTAAAGTACCCAGTAATC | CACATCTGTCCTGAGGTTTCTAC |
Trp53 | CAGTCTACTTCCCGCCATAAA | GTCTCAGCCCTGAAGTCATAAG |
Ulk1 | CAGGGTGGACACATGCTAATAC | CAGCTTGTGGACACTCAGATAC |
Ulk2 | CAACATCTCGTCAGACCACTC | CACTGCCCTCCACACATAAA |
Uvrag | GACCACGAGACAGTTGAGATAG | GCAGGGACAATGGACTTAGAA |
Wipi1 | GTGTGTCTAGACGACGAGAATG | GACTTCTGAGGTAGGCTTCTTG |
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Nah, J.; Sung, E.-A.; Zhai, P.; Zablocki, D.; Sadoshima, J. Tfeb-Mediated Transcriptional Regulation of Autophagy Induces Autosis during Ischemia/Reperfusion in the Heart. Cells 2022, 11, 258. https://doi.org/10.3390/cells11020258
Nah J, Sung E-A, Zhai P, Zablocki D, Sadoshima J. Tfeb-Mediated Transcriptional Regulation of Autophagy Induces Autosis during Ischemia/Reperfusion in the Heart. Cells. 2022; 11(2):258. https://doi.org/10.3390/cells11020258
Chicago/Turabian StyleNah, Jihoon, Eun-Ah Sung, Peiyong Zhai, Daniela Zablocki, and Junichi Sadoshima. 2022. "Tfeb-Mediated Transcriptional Regulation of Autophagy Induces Autosis during Ischemia/Reperfusion in the Heart" Cells 11, no. 2: 258. https://doi.org/10.3390/cells11020258
APA StyleNah, J., Sung, E. -A., Zhai, P., Zablocki, D., & Sadoshima, J. (2022). Tfeb-Mediated Transcriptional Regulation of Autophagy Induces Autosis during Ischemia/Reperfusion in the Heart. Cells, 11(2), 258. https://doi.org/10.3390/cells11020258