Next Article in Journal
Inheritance and Quantitative Trait Loci Mapping of Aromatic Compounds from Clementine (Citrus × clementina Hort. ex Tan.) and Sweet Orange (C. × sinensis (L.) Osb.) Fruit Essential Oils
Previous Article in Journal
Investigating Neuron Degeneration in Huntington’s Disease Using RNA-Seq Based Transcriptome Study
 
 
Article
Peer-Review Record

Cancer Classification Utilizing Voting Classifier with Ensemble Feature Selection Method and Transcriptomic Data

Genes 2023, 14(9), 1802; https://doi.org/10.3390/genes14091802
by Rabea Khatun 1, Maksuda Akter 2, Md. Manowarul Islam 2,*, Md. Ashraf Uddin 3, Md. Alamin Talukder 2, Joarder Kamruzzaman 4, AKM Azad 5, Bikash Kumar Paul 6,7, Muhammad Ali Abdulllah Almoyad 8, Sunil Aryal 3 and Mohammad Ali Moni 9,*
Reviewer 1: Anonymous
Reviewer 3: Anonymous
Genes 2023, 14(9), 1802; https://doi.org/10.3390/genes14091802
Submission received: 15 August 2023 / Revised: 10 September 2023 / Accepted: 12 September 2023 / Published: 14 September 2023
(This article belongs to the Section Molecular Genetics and Genomics)

Round 1

Reviewer 1 Report

Authors provide an interesting work and present it in the appropriate way.

There are some limitations that should be addressed in the revision:

1. what is the threshold to define the cancer type

2. I am curious the reason of authors abandoned AUROC in the evaluation, which is the most prevalent matrix to evaluate the predictor performances

3. for table 6, authors used what kind of data to evaluate pervious works? 

Author Response

Please see the attachment.

Author Response File: Author Response.pdf

Reviewer 2 Report

The paper is very interesting, very well written. The pro problem with used datasets is that they are imabanced  i.e. not equal number of samples per class. Have you considered using oversampling or undersampling methods to improve classification accuracy. If not please cosider it in future research.

 

 

Author Response

Please see the attachment.

Author Response File: Author Response.pdf

Reviewer 3 Report

The authors have presented the work titled as "Cancer Classification Utilising Voting Classifier with Ensemble Feature Selection Method and Transcriptomic Data". The overall presentation seems good. There are few comments which the authors need to address:

1. In several sections such as section 3.2, I will suggest to rename Ensemble because there are a number of tools in biological field with the same name. If possible.

2. Why pearson correlation has been preferred and why not spearmann?

3. Variance threshold needs further expansion and to the point for better clarity.

4. Conclusions seem to be not organised in precise way.

5. Please go through the entire text for some small rewording and rephrasing for english improvement.

Please go through the entire text for some small rewording and rephrasing for english improvement.

Author Response

Please see the attachment.

Author Response File: Author Response.pdf

Back to TopTop