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Genes, Volume 8, Issue 3

2017 March - 21 articles

Cover Story: mRNA libraries derived from various tissues of adult Haliotis discus hannai were sequenced and a transcriptome database, containing a total of 15,110 (female) and 12,145 (male) genes, was successfully constructed. Notwithstanding a similar KEGG composition between sexes, both sexes had several hundreds of isoforms and sex-preferentially expressed genes. The information obtained in this study represents the significant contribution to sex-specific transcriptome resources in marine invertebrates and adds insights into further diverse genetics- and physiology-based research using abalones. View this paper
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Articles (21)

  • Review
  • Open Access
8 Citations
8,314 Views
14 Pages

20 March 2017

Cells reproduce using two types of divisions: mitosis, which generates two daughter cells each with the same genomic content as the mother cell, and meiosis, which reduces the number of chromosomes of the parent cell by half and gives rise to four ga...

  • Feature Paper
  • Review
  • Open Access
178 Citations
18,472 Views
19 Pages

18 March 2017

Prenatal adverse environments, such as maternal stress, toxicological exposures, and viral infections, can disrupt normal brain development and contribute to neurodevelopmental disorders, including schizophrenia, depression, and autism. Increasing ev...

  • Article
  • Open Access
74 Citations
8,615 Views
16 Pages

The Complete Chloroplast Genome Sequences of Six Rehmannia Species

  • Shuyun Zeng,
  • Tao Zhou,
  • Kai Han,
  • Yanci Yang,
  • Jianhua Zhao and
  • Zhan-Lin Liu

15 March 2017

Rehmannia is a non-parasitic genus in Orobanchaceae including six species mainly distributed in central and north China. Its phylogenetic position and infrageneric relationships remain uncertain due to potential hybridization and polyploidization. In...

  • Review
  • Open Access
42 Citations
10,788 Views
21 Pages

The Diabetes-Linked Transcription Factor PAX4: From Gene to Functional Consequences

  • Petra I. Lorenzo,
  • Francisco Juárez-Vicente,
  • Nadia Cobo-Vuilleumier,
  • Mario García-Domínguez and
  • Benoit R. Gauthier

9 March 2017

Paired box 4 (PAX4) is a key factor in the generation of insulin producing β-cells during embryonic development. In adult islets, PAX4 expression is sequestered to a subset of β-cells that are prone to proliferation and more resistant to stress-induc...

  • Article
  • Open Access
40 Citations
12,400 Views
16 Pages

Alternative Splicing Profile and Sex-Preferential Gene Expression in the Female and Male Pacific Abalone Haliotis discus hannai

  • Mi Ae Kim,
  • Jae-Sung Rhee,
  • Tae Ha Kim,
  • Jung Sick Lee,
  • Ah-Young Choi,
  • Beom-Soon Choi,
  • Ik-Young Choi and
  • Young Chang Sohn

9 March 2017

In order to characterize the female or male transcriptome of the Pacific abalone and further increase genomic resources, we sequenced the mRNA of full-length complementary DNA (cDNA) libraries derived from pooled tissues of female and male Haliotis d...

  • Communication
  • Open Access
38 Citations
7,621 Views
12 Pages

Development of Gene‐Based SSR Markers in Winged  Bean (Psophocarpus tetragonolobus (L.) DC.) for  Diversity Assessment

  • Quin Nee Wong,
  • Alberto Stefano Tanzi,
  • Wai Kuan Ho,
  • Sunir Malla,
  • Martin Blythe,
  • Asha Karunaratne,
  • Festo Massawe and
  • Sean Mayes

9 March 2017

Winged bean (Psophocarpus tetragonolobus) is an herbaceous multipurpose legume grown in hot and humid countries as a pulse, vegetable (leaves and pods), or root tuber crop depending on local consumption preferences. In addition to its different nutri...

  • Article
  • Open Access
32 Citations
8,889 Views
8 Pages

A Frameshift Mutation in KIT is Associated with  White Spotting in the Arabian Camel

  • Heather Holl,
  • Ramiro Isaza,
  • Yasmin Mohamoud,
  • Ayeda Ahmed,
  • Faisal Almathen,
  • Cherifi Youcef,
  • Semir Gaouar,
  • Douglas F. Antczak and
  • Samantha Brooks

9 March 2017

While the typical Arabian camel is characterized by a single colored coat, there are rare populations with white spotting patterns. White spotting coat patterns are found in virtually all domesticated species, but are rare in wild species. Theories s...

  • Review
  • Open Access
44 Citations
15,545 Views
28 Pages

7 March 2017

All living organisms need to duplicate their genetic information while protecting it from unwanted mutations, which can lead to genetic disorders and cancer development. Inaccuracies during DNA replication are the major cause of genomic instability,...

  • Article
  • Open Access
5 Citations
7,271 Views
17 Pages

6 March 2017

Short interspersed elements (SINEs) are typically silenced by DNA hypermethylation in somatic cells, but can retrotranspose in proliferating cells during adult neurogenesis. Hypomethylation caused by disease pathology or genotoxic stress l...

  • Article
  • Open Access
16 Citations
7,557 Views
11 Pages

c‐Myc‐Induced Survivin Is Essential for Promoting  the Notch‐Dependent T Cell Differentiation from  Hematopoietic Stem Cells

  • Rizwanul Haque,
  • Jianyong Song,
  • Mohammad Haque,
  • Fengyang Lei,
  • Praneet Sandhu,
  • Bing Ni,
  • Songguo Zheng,
  • Deyu Fang,
  • Jin‐Ming Yang and
  • Jianxun Song

6 March 2017

Notch is indispensable for T cell lineage commitment, and is needed for thymocyte differentiation at early phases. During early stages of T cell development, active Notch prevents other lineage potentials including B cell lineage and myeloid cell (e....

  • Article
  • Open Access
56 Citations
12,371 Views
21 Pages

Antisense Oligonucleotides Used to Target the DUX4 mRNA as Therapeutic Approaches in FaciosScapuloHumeral Muscular Dystrophy (FSHD)

  • Eugénie Ansseau,
  • Céline Vanderplanck,
  • Armelle Wauters,
  • Scott Q. Harper,
  • Frédérique Coppée and
  • Alexandra Belayew

3 March 2017

FacioScapuloHumeral muscular Dystrophy (FSHD) is one of the most prevalent hereditary myopathies and is generally characterized by progressive muscle atrophy affecting the face, scapular fixators; upper arms and distal lower legs. The FSHD locus maps...

  • Review
  • Open Access
101 Citations
11,088 Views
34 Pages

3 March 2017

Innate and acquired chemoresistance exhibited by most tumours exposed to conventional chemotherapeutic agents account for the majority of relapse cases in cancer patients. Such chemoresistance phenotypes are of a multi-factorial nature from multiple...

  • Review
  • Open Access
17 Citations
10,157 Views
15 Pages

2 March 2017

During DNA replication many factors can result in DNA replication stress. The DNA replication stress checkpoint prevents the accumulation of replication stress-induced DNA damage and the potential ensuing genome instability. A critical role for post-...

  • Review
  • Open Access
97 Citations
11,324 Views
16 Pages

2 March 2017

Gene therapy arises as a great promise for cancer therapeutics due to its potential to silence genes involved in tumor development. In fact, there are some pivotal gene drivers that suffer critical alterations leading to cell transformation and ultim...

  • Article
  • Open Access
18 Citations
7,332 Views
15 Pages

Rapid Sampling of Escherichia coli After Changing Oxygen Conditions Reveals Transcriptional Dynamics

  • Joachim Von Wulffen,
  • Andreas Ulmer,
  • Günter Jäger,
  • Oliver Sawodny and
  • Ronny Feuer

28 February 2017

Escherichia coli is able to shift between anaerobic and aerobic metabolism by adapting its gene expression, e.g., of metabolic genes, to the new environment. The dynamics of gene expression that result from environmental shifts are limited, amongst o...

  • Review
  • Open Access
33 Citations
6,283 Views
10 Pages

Epigenetics in Stroke Recovery

  • Haifa Kassis,
  • Amjad Shehadah,
  • Michael Chopp and
  • Zheng Gang Zhang

27 February 2017

Abstract: While the death rate from stroke has continually decreased due to interventions in the hyperacute stage of the disease, long-term disability and institutionalization have become common sequelae in the aftermath of stroke. Therefore, identif...

  • Review
  • Open Access
81 Citations
16,018 Views
15 Pages

MYC in Regulating Immunity: Metabolism and Beyond

  • J.N. Rashida Gnanaprakasam and
  • Ruoning Wang

25 February 2017

Myelocytomatosis oncogene (MYC) family members, including cellular MYC (c-Myc), neuroblastoma derived MYC (MYCN), and lung carcinoma derived MYC (MYCL), have all been implicated as key oncogenic drivers in a broad range of human cancers. Beyond cance...

  • Review
  • Open Access
43 Citations
16,888 Views
17 Pages

Targeting Splicing in the Treatment of Human Disease

  • Marc Suñé-Pou,
  • Silvia Prieto-Sánchez,
  • Sofía Boyero-Corral,
  • Cristina Moreno-Castro,
  • Younes El Yousfi,
  • Josep Mª Suñé-Negre,
  • Cristina Hernández-Munain and
  • Carlos Suñé

24 February 2017

The tightly regulated process of precursor messenger RNA (pre-mRNA) alternative splicing (AS) is a key mechanism in the regulation of gene expression. Defects in this regulatory process affect cellular functions and are the cause of many human diseas...

  • Article
  • Open Access
12 Citations
7,125 Views
18 Pages

Systematic Identification and Assessment of Therapeutic Targets for Breast Cancer Based on Genome-Wide RNA Interference Transcriptomes

  • Yang Liu,
  • Xiaoyao Yin,
  • Jing Zhong,
  • Naiyang Guan,
  • Zhigang Luo,
  • Lishan Min,
  • Xing Yao,
  • Xiaochen Bo,
  • Licheng Dai and
  • Hui Bai

24 February 2017

With accumulating public omics data, great efforts have been made to characterize the genetic heterogeneity of breast cancer. However, identifying novel targets and selecting the best from the sizeable lists of candidate targets is still a key challe...

  • Review
  • Open Access
8 Citations
9,758 Views
16 Pages

Historical and Clinical Experiences of Gene Therapy for Solid Cancers in China

  • Bo Li,
  • Ning Gao,
  • Zhuang Zhang,
  • Qian‐Ming Chen,
  • Long‐Jiang Li and
  • Yi Li

24 February 2017

Based on the theoretical and clinical development of modern medicines, gene therapy has been a promising treatment strategy for cancer and other diseases. The practice of gene therapy is nearly 27 years old, since the first authorized gene transfer s...

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Genes - ISSN 2073-4425