About the Genetic Mechanisms of Apatites: A Survey on the Methodological Approaches
Abstract
:1. Introduction
- (1)
- A sketch of the apatite bulk structure, drawn according the most realistic related symmetry space groups, focusing mainly on Hydroxyapatite (HAp) and, secondarily, on its structurally derivated, the Carbonated apatite (CAp).
- (2)
- A comparison between the stable surface profiles of the main crystallographic {hkl} forms, i.e., the hexagonal prism and pinacoids, and the monoclinic pinacoids.
- (3)
- The ambiguities arising in interpreting the growth morphology, when the hexagonal symmetry of apatite is assumed “a priori” and the twinning occurrence is not considered as a “habit modifier”.
- (4)
- The role of the epitaxy when another phosphate works as a precursor of the apatite (e.g., the case of the Monetite assisted growth of micrometric HAp crystals).
- (5)
- The growth of nanosized vs. micrometric HAp crystals.
2. Crystal-Chemistry and Bulk Structure of Apatites: Hydroxy-Apatite as a “Case Study”
2.1. The Hexagonal Setting
2.2. The Monoclinic Setting
2.3. The Complexity of Carbonated Apatites
3. Solved and Unsolved Problems about the Relationship between Monoclinic and Hexagonal HAp Growth Behavior
- The first paper in which the surface profiles of HAp were systematically examined and growth morphology was predicted and compared with the observed one, appeared on 1986. Terpstra et al. [13] applied the “connected net” method, based on the morphological theory by Hartman-Perdok [63] to the hexagonal (P63/m) HAp structure. Starting from a qualitative evaluation of the Ca–PO4 and Ca–OH bonds, and assuming that the ordering of the OH dipoles has any influence on the Ca–OH bonds, the Authors argued that one can expect that “…monoclinic HAp should have the same morphological appearance of the hexagonal HAp”; accordingly, “…the lowering of the apatite symmetry (P63/m → P21/b) due to the ordering of OH is not likely to be the cause of the occurrence of the plate-like apatitic crystals in calcified tissues”.
- Surface relaxation on two opposite (100) free surfaces of a P63/m HAp crystal, was invoked to explain the “… symmetry breaking effect on growth morphologies, producing equilibrium platelet morphologies even when these are inconsistent with the symmetry of the crystal” [14,64]. However, the Authors are conscious that platelet growth morphology does not occur when HAp is precipitated in vitro. Hence they speculated that “…it may be possible that in vivo growth of apatite the body may manipulate the growth conditions (carbonate impurities, organic molecules found in bones) so as to allow the platelet growth mechanism to work”.
- An interesting attempt was performed by De Leeuw and Rabone [17], who used molecular dynamics simulations to evaluate the interaction of citric acid with the hexagonal (P63/m) prismatic (01.0) and pinacoidal (00.1) surfaces in an aqueous environment. The prismatic surfaces were assumed as terminated by PO4 groups (nothing being revealed about the termination of the pinacoid). Surface energies were calculated for dehydrated (in vacuum) surfaces, followed by those calculated in aqueous environment and, finally, with citric acid in an aqueous environment. The large difference in the adsorption energies for these two kind of surfaces indicates that “…citric acid would be a much better growth inhibitor of the {01.0} prismatic form, slowing down its growth rate by binding to surface growth sites”. As a consequence, the crystal shape of HAp grown in the presence of citric acid would become along [001], the direction of the OH channels, with expression of the prismatic form, as compared to the crystal morphology in the absence of citric acid. It is worth noting that this work, published on 2007, allowed outlining, for the first time, the influence of the different surface structure of two important HAp forms, even if the molecular adsorption is assumed within the “large constraints” of the Molecular Dynamic Simulation.
- Astala and Stott [61] carried out a first-principles study about water adsorption on the {01.0}, {00.1} and {10.1} forms of hexagonal (P63/m) HAp. In particular, they determined the surface energy in vacuum of the pinacoid {00.1} having considered the approach to modeling the surface profiles proposed by Rulis et al. [62]. In this model, the sole constraint imposed was that “… surface must be constructed so that the corresponding slabs were charge neutral”. Moreover, they considered that, in HAp, the orientation of the OH group along the [001] channels (c axis) reduces the symmetry such that the top and bottom of the 001 slab surfaces are no longer symmetric. Accordingly, these Authors introduced the term “symmetry breaking” limited to the form {00.1}. As concerns the other important form, the hexagonal {01.0} prism, the problem of the “symmetry breaking” does not longer exist since the OH dipoles lie parallel to the {01.0} surfaces. However, this form can terminate with three different profiles, according to the geometric 01.0 cut applied to the bulk of the crystal. One of them corresponds to a stoichiometric slab (Ca/P ratio being 1.67); the two out of three are non-stoichiometric: a Ca-rich slab (Ca/P ratio = 1.75) and a PO4 rich slab (Ca/P ratio = 1.5). This is surely interesting, but something was wrong, not only from a crystallographic point of view but also because the growth mechanism of the flat faces (F-faces, in the sense of Hartman-Perdok [63]) was not respected. In fact, the space group (P63/m) implies that the slices of thickness d002 and d010 should be centrosymmetric and hence their total dipole moment should vanish (owing to the electrical stability of the slice). Hence, the symmetry breaking attributed to the steps growing on both sides of the {00.1} form is not self-consistent.
- A sensible step forward was taken by the Ugliengo et al. [19], who carried out a periodic B3LYP study of hexagonal P63 HAp (00.1) surface modelled by thin layer slabs [19]. The (00.1) surface coming out from P63 group is intrinsically polar, owing to the OH dipoles, all iso-oriented perpendicularly to the 00.1 planes. Nevertheless, the convergence of , the specific surface energy value for the hexagonal (00.1) form, has been ascertained for a slab thickness varying from a minimum of one layer (~7Å) to a maximum of 9 layers (~60Å). For the homologous monoclinic (non-polar) P21/b HAp (00.1) surface the convergence is, obviously, more rapidly obtained. For the sake of comparison, the two asymptotic values are: = 1107 and = 1337 erg cm−2. In a successive paper [26], it has been explained why the right choice of the P63 group has been made: as a matter of fact, “… the quantum-mechanical simulation of the hexagonal HAp cannot be performed within P63/m space group because of the unphysical duplication of each OH group by the m mirror plane”. In the same paper, the surface profiles of hexagonal prismatic {01.0} and pyramidal {10.1} forms were investigated as well. On the ground of Astala and Stott [61] and according to the Authors way of thinking, the {01.0} non-polar surfaces can be imagined as a stacking of electro-neutral layers …-ABA-ABA-…where the A-type has the composition Ca3(PO4)2 while the B-type corresponds to the composition Ca4(PO4)2(OH)2. The specific surface energy related to these “stoichiometric” surfaces is = 1709 erg cm−2. On the ground of recent findings [59,61], two other “non-stoichiometric” {01.0} surfaces were also considered: [B-AA-B-AA-B], Ca-rich, being Ca/P = 1.71 and [AA-B-AA-B-AA], P-rich, being Ca/P = 1.62. Regrettably, the corresponding values were not calculated, since thesurface energy cannot be evaluated using the standard formula, adopted by the Authors, that is valid for stoichiometric slab only.
- It is worth recollecting as well a remarkable paper recently publishedby Putnis et al. [65] about the growth kinetics measured by AFM on a (010) prismatic face of a synthetic HAp crystal growing from aqueous solution [65]. It was observed that HAp crystallization occurred by either classical spiral growth or non-classical particle-attachment from various supersaturated solutions at near-physiological conditions, suggesting these mechanisms do not need to be mutually exclusive. Moreover, this work represents “… the first evidence of time-resolved morphology evolution during precursor-particle attachment processes, ranging from primary spheroidal particles of different sizes to triangular and hexagonal solids formed by kinetically accessible organized assembly and aggregation”.
4. Approaching the Morphology of the Monoclinic HAp through the Hartman-Perdok Method
4.1. The Surface Profiles of the Faces in the [010] Zone, i.e., Parallel to the HAp Channels
- Neither PO4 tetrahedra nor Ca ions lie on the ideal separation surface between two adjacent slices and hence both ions are not shared between adjacent slices. Further, the , and slices do not show dipole moments perpendicular to their surfaces. Accordingly, the surface profiles of the three pinacoids {100}, {} and {001} do not have to be reconstructed.
- The OH ions in the channels are screened from the mother phase by the outmost layers of each slice populated by PO4 and Ca ions not directly bound to the OH in the channels.
- The and slices are center-symmetric, while the slice contains only the 21 screw axes parallel to the [010] channels: this implies that a growing HAp monoclinic crystal shows two types of slices, according to whether the OH dipoles lying in the middle of the slice are oriented along the positive or negative sense of the y axis. On the contrary, and slices do not show polarity parallel to the slice itself, which could unavoidably affect the difference of both surface and attachment energies of {100} and {} with respect to the {001} form.
- the outmost layers of the new surfaces are populated not only by the PO4 tetrahedra, but also by Ca ions and OH dipoles;
- the occupancies of the outmost layers must be reduced by 50%, as follows from the constraints (symmetry, charge, stoichiometry) imposed by the frontiers between adjacent , and slices. In fact, these frontiers pass through the centers of mass of PO4, Ca and OH ions.
4.2. The Specific Surface Energies of the Monoclinic HAp and Its Equilibrium Shape (ES) Calculated at 0 K
- The surfaces of the three pinacoids {001}, {} and {100}, parallel to the OH channels, can be terminated either by only PO4 or by the complete set composed by PO4, Ca and OH ions.
- The basal {010} pinacoid, which is perpendicular to the OH channels, can be terminated either by only Ca or by the set made by PO4, Ca and OH ions.
- The three monoclinic prisms {012}, {110} and {} can terminate either by Ca ions (as for the {012} prism) or by PO4 ions (as for the {110} and {} prisms). It follows that the terms like “Ca rich” and “P rich” along with the terms like “stoichiometric” and “non-stoichiometric” lose meaning. On the contrary, “reconstructed, or non-reconstructed, outmost layer”, “polar, or non-polar, dhkl slice”, “relative disposition of ions in a given reconstruction”, assume a precise crystallographic meaning, unambiguous in order to describe both equilibrium and growth crystal properties.
- The lowest values of the calculated specific surface energies, for every {hkl} form, was used to draw the ES of HAp at 0K. As shown in Figure 7 of reference [38], the monoclinic ES can be described by a pseudo-hexagonal “prism” truncated by the {010} pinacoid, which reaches the lowest γ value of the entire crystal when its surface is Ca-terminated ( = 1041 erg cm−2). The pseudo-hexagonality of the “prism” arises from the closeness of the lowest γ values of the three pinacoids: = 1546 erg cm−2; = 1525 erg cm−2; = 1515 erg cm−2, all these values being obtained when the outmost layers of these forms are reconstructed and exhibit an outmost population made by PO4, Ca and OH ions. The ES is completed by the presence of the small–sized quasi-equivalent prisms {012}, {110} and {}.
4.3. About the Growth Morphology of the Monoclinic HAp: A Comparison with the Hexagonal One
5. The Growth of Nanosized vs. Micrometric HAp Crystals, in the Frame of the Experimental Methods
5.1. The Role of the Epitaxy on the Growth of HAp from a Phosphate Precursor and the Control of Nucleation Frequency and Growth Rate by Supersaturation
5.2. The Issue of the Solubility and Its Consequences on the Nucleation Frequency
5.3. The Effect of the Presence of Carbonate Ions in Solution
6. Conclusions
Acknowledgments
Author Contributions
Conflicts of Interest
References
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Ca/P Molar Ratio | Mineral Name | Chemical Composition |
---|---|---|
1.5–1.67 | Calcium-deficient hydroxyapatite (Ca-def HAp) | Ca10−x(HPO4)x(PO4)6−x (OH)2−x(0 < x < 1) |
1.67 | Hydroxyapatite (HAp) | Ca10(PO4)6(OH)2 |
1.67 | End-member, A-type, carbonated apatite | Ca10(PO4)6CO3 |
≥1.67 | End-member, B-type, carbonated hydroxylapatite | Ca10−x[(PO4)6−2x (CO3)2x](OH)2(0 < x < 1) |
≥1.67 | Mixed A-type and B-type carbonated apatite | Ca10−x[(PO4)6−2x (CO3)2x]CO3(0 < x < 1) |
1.67 | Fluorapatite (FAp) | Ca10(PO4)6F2 |
1.67 | Oxyapatite (OAp), mineral voelckerite | Ca10(PO4)6O |
Structure | Space Group | a0 | b0 | c0 | α | β | γ | Reference |
---|---|---|---|---|---|---|---|---|
HAp (Hydroxy-apatite) | ||||||||
hexagonal | P63/m | 9.4302 | 9.4302 | 6.8911 | 90° | 90° | 120° | [7,8,9,10,11,12,13,14,15,16,17,18,19] |
monoclinic | P21/b | 9.4214 | 2 × a0 | 6.881 | 90° | 90° | 120° | [20,21,22] |
FAp (fluor-apatite) | ||||||||
hexagonal | P63/m | 9.367 | 9.3973 | 6.8782 | 90° | 90° | 120° | [12,23,24,25] |
OAp (oxy-apatite) | ||||||||
hexagonal | P | 9.432 | 9.432 | 6.88 | 90.3° | 90° | 119.9° | [1,23,24,25] |
Monoclinic HApForm | PBC of Reference | Surface Termination | Is the Outmost Layer Shared between Adjacent Slices? | Surface Reconstruction Needed | γ001(erg cm−1) |
---|---|---|---|---|---|
{001} | [010]B | PO4, Ca, OH | yes | yes | 1546, 1613, 1666,1691 |
[010]A | PO4 | no | no | 1712 | |
[010]B | PO4, Ca, OH | yes | yes | 1738,1741,1742,1793 |
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Pastero, L.; Bruno, M.; Aquilano, D. About the Genetic Mechanisms of Apatites: A Survey on the Methodological Approaches. Minerals 2017, 7, 139. https://doi.org/10.3390/min7080139
Pastero L, Bruno M, Aquilano D. About the Genetic Mechanisms of Apatites: A Survey on the Methodological Approaches. Minerals. 2017; 7(8):139. https://doi.org/10.3390/min7080139
Chicago/Turabian StylePastero, Linda, Marco Bruno, and Dino Aquilano. 2017. "About the Genetic Mechanisms of Apatites: A Survey on the Methodological Approaches" Minerals 7, no. 8: 139. https://doi.org/10.3390/min7080139
APA StylePastero, L., Bruno, M., & Aquilano, D. (2017). About the Genetic Mechanisms of Apatites: A Survey on the Methodological Approaches. Minerals, 7(8), 139. https://doi.org/10.3390/min7080139