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Epigenomes, Volume 3, Issue 2

2019 June - 5 articles

Cover Story: The brain is highly dependent on the environment to function, promoting unique DNA methylation profiles across brain tissues. Little is known about brain epigenomics in any agricultural species, but it has the potential to be influential in phenotypic variation for many economically important traits. Global variation in DNA methylation in the amygdala, bed nucleus of the stria terminalis, cingulate gyrus, dorsal raphe, hippocampus, hypothalamus, nucleus accumbens, periaqueductal gray, and prefrontal cortex was measured in six Red Angus x Simmental steers. Three of these tissues have not been measured for global DNA methylation in any species. View this paper.
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Articles (5)

  • Article
  • Open Access
15 Citations
5,726 Views
18 Pages

Disruption of Broad Epigenetic Domains in PDAC Cells by HAT Inhibitors

  • Diana L. Gerrard,
  • Joseph R. Boyd,
  • Gary S. Stein,
  • Victor X. Jin and
  • Seth Frietze

The spreading of epigenetic domains has emerged as a distinguishing epigenomic phenotype for diverse cell types. In particular, clusters of H3K27ac- and H3K4me3-marked elements, referred to as super-enhancers, and broad H3K4me3 domains, respectively,...

  • Article
  • Open Access
23 Citations
6,630 Views
16 Pages

Integrating Signals from Sperm Methylome Analysis and Genome-Wide Association Study for a Better Understanding of Male Fertility in Cattle

  • Lingzhao Fang,
  • Yang Zhou,
  • Shuli Liu,
  • Jicai Jiang,
  • Derek M. Bickhart,
  • Daniel J. Null,
  • Bingjie Li,
  • Steven G. Schroeder,
  • Benjamin D. Rosen and
  • George E. Liu
  • + 3 authors

Decreased male fertility is a big concern in both human society and the livestock industry. Sperm DNA methylation is commonly believed to be associated with male fertility. However, due to the lack of accurate male fertility records (i.e., limited ma...

  • Editorial
  • Open Access
3 Citations
4,653 Views
6 Pages

In addition to the genetic variations, recent evidence has shown that DNA methylation of both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC) underlies the pathogenesis of pediatric cancer. Given the high mortality rate, there is an urgent...

  • Brief Report
  • Open Access
8 Citations
6,391 Views
7 Pages

Global DNA Methylation in the Limbic System of Cattle

  • Bonnie Cantrell,
  • Hannah Lachance,
  • Brenda Murdoch,
  • Julia Sjoquist,
  • Richard Funston,
  • Robert Weaber and
  • Stephanie McKay

To elucidate the extent to which DNA methylation varies across multiple tissues in the brain and between animals, we have quantified global DNA methylation in tissues comprising the limbic system for six Red Angus x Simmental steers. Global DNA methy...

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Epigenomes - ISSN 2075-4655