Fetal Fractures in an Infant with Maternal Ehlers-Danlos Syndrome, CCDC134 Pathogenic Mutation and a Negative Genetic Test for Osteogenesis Imperfecta
Abstract
:1. Introduction
Case Report
2. Materials and Methods
Whole-Genome Sequencing
3. Results
3.1. Phenotypes of the Patient and Parents
3.2. Whole-Genome Sequencing Results
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Mother | Father | Infant | |
---|---|---|---|
Phenotype | hEDS and nonunion fracture | Normal | Intrauterine Fractures |
Gene | Genotypes | Genotypes | Genotypes |
CCDC134 | N/V | N/V | V/V |
COL15A1 | N/V | N/V | V/V |
ZFPM1 | N/V | N/V | V/V |
SNTB1 | N/V | N/V | V/V |
F13B | N/N | N/V | N/V |
TTN | N/N | N/V | N/V |
ACAD9 | N/V | N/N | N/V |
BCHE | N/N | N/V | N/V |
NBEAL2 | N/N | N/V | N/V |
AUTS2 | N/V | N/N | N/V |
ASPH | N/V | N/N | N/V |
NCAPD3 | N/N | N/V | N/V |
CABP4 | N/N | N/V | N/V |
MYH3 | N/V | N/N | N/V |
KIR2DL3 | N/N | N/V | N/V |
CRYBB3 | N/V | N/N | N/V |
ZNF75D | N/V | N/N | N/V |
Zygosity of Variant in the Infant | Gene | SNP | HGVSC | HGVSP | Allele Frequency | Allele | Clinical Significance | Consequence | Suggested Gene Function | SIFT | PolyPhen |
---|---|---|---|---|---|---|---|---|---|---|---|
Homozygous variants | CCDC134 *a | rs1255441851 | c.2T>C | p.Met1Thr | 0.000004 | T > C | Not reported | Initiator codon loss-of-function | Regulating ERK-MAPK pathwayOsteogenesis Imperfecta phenotype | Deleterious | Probably damaging |
COL15A1 * | rs7851787 | c.1762-6T>C | - | 0.15361 | T > C | Not reported | Splice region variant | Bone extracellular matrix protein | - | - | |
ZFPM1 * | rs759189176 | c.1335_1338del | p.Leu446fs | 0.0003 | delTCTG | Not reported | Frameshift variant | Regulating osteogenic lineage by interaction with GATA2 | |||
SNTB1 | rs547154887 | c.12_14GGC | p.Ala8_Ala10del | 0.02 | delGCC | Not reported | Inframe deletion | Unknown | - | - | |
Heterozygous variants | F13B | rs17514281 | c.1025T>C | p.Ile342Thr | 0.007 | A > G | Conflicting | Missense variant | Unknown | Deleterious | Probably damaging |
TTN | rs397517630 | c.57586C>G | p.Leu19196Val | 0.00017 | G > C | Conflicting | Missense variant | Unknown | - | Probably damaging | |
ACAD9 | rs863224844 | c.359del | p.Phe120fs | 0.0001 | delT | Likely pathogenic | Frameshift variant | Unknown | - | - | |
BCHE * | rs1799807 | c.293A>G | p.Asp98Gly | 0.012 | T > C | Likely pathogenic | Missense variant | Regulating the number of osteoclasts and bone microarchitecture | Deleterious | Probably damaging | |
NBEAL2 | rs201373710 | c.1948G>A | p.Gly650Arg | 0.0016 | G > A | Conflicting | Missense variant | Bone marrow | Deleterious | Probably damaging | |
AUTS2 * | rs767529359 | c.1295C>T | p.Pro432Leu | 0.0002 | C > A | Conflicting | Missense variant | Skeletal anomalies | Deleterious | Probably damaging | |
ASPH | rs80163539 | c.518del | p.Asp173fs | 0.001 | delT | Conflicting | Frameshift variant | Osteogenic differentiationunknown | - | - | |
NCAPD3 | rs151013524 | c.1981G>T | p.Asp661Tyr | 0.0019 | C > A | Uncertain significance | Missense variant | Abnormal development of lower spine | Deleterious | Probably damaging | |
CABP4 | rs146764702 | c.547G>C | p.Gly183Arg | 0.0005 | G > C | Uncertain significance | Missense variant | Unknown | Deleterious | Probably damaging | |
MYH3 * | rs557849165 | c.-9+1G>A | - | 0.00274 | C > T | Pathogenic | Splice donor variant | Skeletal dysplasia | - | - | |
KIR2DL3 | rs193921051 | c.71-4C>T | - | 0.08 | C > T | Uncertain significance | Splice region variant | Bone marrow | - | - | |
CRYBB3 | rs147937174 | c.584G>A | p.Arg195His | 0.0001 | G > A | Conflicting * | Missense variant | Unknown | Deleterious | Probably damaging | |
Hemizygous variants | ZNF75D | rs150700463 | c.934C>T | p.Gln312Ter | 0.00134 | G > A | Not reported | Stop gained | Unknown | - | - |
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Holick, M.F.; Shirvani, A.; Charoenngam, N. Fetal Fractures in an Infant with Maternal Ehlers-Danlos Syndrome, CCDC134 Pathogenic Mutation and a Negative Genetic Test for Osteogenesis Imperfecta. Children 2021, 8, 512. https://doi.org/10.3390/children8060512
Holick MF, Shirvani A, Charoenngam N. Fetal Fractures in an Infant with Maternal Ehlers-Danlos Syndrome, CCDC134 Pathogenic Mutation and a Negative Genetic Test for Osteogenesis Imperfecta. Children. 2021; 8(6):512. https://doi.org/10.3390/children8060512
Chicago/Turabian StyleHolick, Michael F., Arash Shirvani, and Nipith Charoenngam. 2021. "Fetal Fractures in an Infant with Maternal Ehlers-Danlos Syndrome, CCDC134 Pathogenic Mutation and a Negative Genetic Test for Osteogenesis Imperfecta" Children 8, no. 6: 512. https://doi.org/10.3390/children8060512