1. Introduction
Petroleum hydrocarbons as soil contaminants endanger human health because of their potential to migrate from contaminated soil into groundwater. Therefore, it is crucial to understand how to remediate petroleum hydrocarbons-contaminated sites. Soil vapor extraction (SVE) is a popular in situ remediation approach, but it faces a tailing issue. Tailing increases mass transfer resistance, which in turn increases the clean-up time. Additionally, tailing keeps contaminant concentrations higher than the clean-up standard. Substituting SVE with an appropriate bioremediation method can eliminate these drawbacks [
1]. Bioventing is usually an appropriate alternative to implement following SVE since the physical system is the same. The main difference is that nutrients are added to stimulate the microbial population and the air flow is reduced to minimize volatilization.
Bioventing (BV) is an in situ method that can economically clean up motor oil-, diesel fuel-, jet fuel-, and gasoline-contaminated soils and overcome the tailing effects caused by the SVE process [
2]. Bioventing is a biological degradation technique where native aerobic microorganisms are stimulated by adding oxygen and nutrients (phosphorus and nitrogen) to bioremediate petroleum hydrocarbons [
3].
The utilization of numerical simulation models has been proposed as a methodology for synthesizing laboratory-scale processes with the intricacies inherent in field settings. These models have been advanced as a means of investigating and comprehending the dynamics within BV systems. It is important to note that existing simulation models applicable to BV systems are diverse in their scope and the processes they consider [
4]. Many modeling studies have been conducted to describe various aspects of bioventing and SVE systems.
Simulation models that are limited to analyzing the behavior of gas flow have been employed in the examination of pneumatic pump tests [
5,
6] and in the evaluation and design of SVE and BV systems [
7,
8]. A more complex group of models integrates analytical or numerical transport solutions with single-phase gas flow solutions [
9,
10]. Additionally, there are models that incorporate multiphase flow in porous media [
11], the simulation of nonequilibrium interphase mass transfer and heat transfer in subsurface [
12], and the inclusion of biodegradation processes [
4,
13,
14]. Among these, the most sophisticated are those of McClure and Sleep [
13] and Rathfelder et al. [
4].
However, it should be noted that each of these models possess limitations in terms of their general applicability to field problems or lack of proper assumptions for developing a robust tool with reasonable computational cost for bioventing simulation. Accordingly, a literature review is conducted to investigate bioventing models’ applicability and limitations, with the aim of highlighting the importance of a new inclusive mixed model based on appropriate assumptions.
McClure and Sleep [
13] developed a 2D model for bioventing using a finite difference method. The equilibrium interphase mass transfer incorporated with three-phase (gas–organic–water) flow and the dispersive transportation of oxygen, carbon dioxide, and organic components were considered in the model. The model included the consumption of components and oxygen, microorganisms’ growth, and the carbon dioxide produced due to their activation. The Dual Monod method was applied to simulate the limitations of biodegradation caused by oxygen and substrate availability. The results of the simulation showed that location and gas flow rates were the key parameters affecting the efficiency of the bioventing technique. The model is comprehensive in its consideration of several factors related to bioventing; however, the inclusion of all three phases as mobile phases necessitates a significant computational cost. Furthermore, utilizing the finite difference method to solve the problem has the disadvantage of being extremely sensitive to the size of the grid, which must be kept relatively small to obtain accurate results. As is discussed in next section, the finite difference method may not be suitable for addressing complex geometries or certain types of boundary conditions.
Rathfelder et al. [
4] developed a 2D model (MISER) to simulate soil vapor extraction and bioventing by considering combined physical, chemical, and biological phenomena. The governing equations included two-phase flow, multi-component compositional transport, and non-equilibrium interphase mass transfer. MISER is considered the most sophisticated model proposed for SVE and bioventing. An aerobic biodegradation process was studied. The model was solved with the Galerkin finite element method using linear triangular elements. The mass transfer of the gas stream controlled the bioventing efficiency; a higher efficiency was achieved with an optimum supply rate of both substrate and oxygen. The model contained some assumptions which impacted the accuracy, such as the neglect of macroscopic diffusive transport within organic and solid phases. In addition, the mass transfer resistance was only considered within the aqueous phase, as was the biodegradation process [
4]. MISER is the most complex and comprehensive model proposed for the simulation of both SVE and bioventing in saturated and unsaturated soil. This model is dimensionally dependent and unable to simulate 3D geometries. The complexity inherent in the model results in significant difficulties in terms of numerical solutions and the computational cost associated with simulation. The Galerkin finite element method, which is utilized as the main numerical solution method in MISER, has a limitation in effectively addressing convective-dominated problems, leading to oscillations in the results. Additionally, the source code package of MISER is not intuitive and is challenging to implement, coupled with a high computational cost associated with simulation in cases of complex geometries.
Schwarze et al. [
15] modeled bioventing and included horizontal venting wells to describe the flow field of pressurized air. Biodegradation was not incorporated in the model as the purpose of the model was to assess the physical behavior of airfields in soil. The governing flow equations in the porous media were discretized using the finite volume method. The heterogeneity of the soil, as well as permeability variations, were considered in the simulation. However, random permeability variations and pressure losses of the air were excluded. The model developed by Schwarze et al. [
15] appropriately accounts for relevant assumptions to accurately depict the gas flow dynamics in bioventing. However, it should be noted that the biodegradation reaction was not incorporated, as the objective of the research was to examine the gas flow in unsaturated soil rather than to predict the duration of the biodegradation process.
Sui et al. [
14,
16] presented a bioventing model to remediate trichloroethylene (TCE) and toluene contaminants from soil. The conditions considered in the model included the non-equilibrium interphase mass transfer, multicomponent flow, and aerobic biodegradation. An upstream-weighted multiple cell balance method and operator splitting method (OS) were applied to solve the model. A key parameter affecting contaminant distribution was the air injection rate; in the late stages of the bioventing technique, a lower flow rate was found to be more suitable. A total TCE remediation rate of 95% was achieved. Although the heterogeneity of the soil density and porosity was considered in the model, some assumptions were simplified so the accuracy decreased. The assumptions were as follows: diffusive and convective transport was assumed only in the vapor phase; the aqueous phase and NAPLs were considered immobile; sorption between the solid and gas phases was neglected; and the biodegradation was assumed to occur only within the aqueous phase.
Fernández et al. [
17] developed a kinetic model for the bioremediation process of a diesel-polluted clayey soil. Mass transfer phenomena, Monod kinetics, and hydrocarbon dispersal among solid, water, non-aqueous liquid, and air phases were simultaneously modeled. The system was considered a completely closed batch reactor as the fluid flow was not incorporated in the model. The simulation results were validated using the Pearson correlation coefficient and were in good agreement with previous experimental works. The following assumptions were considered to expand the mathematical model: the system was considered closed; and the diesel contaminants were assumed to be present in all the phases. The microorganisms were homogeneously dispersed in the aqueous phase after inoculation and had access to the contaminants of the other phases. Mass transfer coefficients and kinetics parameters were estimated using the model.
Huang and Goltz [
18] analytically solved the SVE equations, which incorporate terms such as mechanical dispersion, advection, molecular diffusion, and rate-limited transfer of contaminants in the form of dissolved, absorbed, and separate phases into the gas phase, by utilizing the Laplace transform with respect to time. The solutions were represented in the Laplace domain using confluent hypergeometric functions, which were subsequently inverted numerically to obtain the temporal and spatial concentration distribution of contaminants in the soil vapor extraction well. The study found that while molecular diffusion of the gas phase did not significantly impact the contaminant concentrations at extraction well, it did affect the spatial distribution of concentrations [
18]. These analytical solutions provide a useful tool for designing SVE remediation strategies and verifying the performance of numerical models used to simulate SVE systems. Additionally, the model allows for the inclusion of a decay rate of contaminants as a first-order equation, enabling the modeling of a simplified form of bioventing by adjusting operation parameters such as concentration, air flow rate, and geometry. One limitation of this study is that it does not account for variations in phase saturations and assumes that the gas flow is in a steady state and unchanging throughout the duration of the study across all grid points. Another major limitation is that the analytical solution is in 1D and there is no option to solve 2D or 3D cases.
Many of the physical, biological, and chemical phenomena associated with bioventing are complex, so proposing a comprehensive bioventing model will be complicated. In addition, the structure and degree of soil heterogeneities which affect biodegradation are also challenging. Moreover, the distribution of some parameters such as water content in the field is non-uniform and not clear which imparts the metabolic capability and distribution of microorganisms in the field [
19]. To develop a robust tool for predicting bioventing closure time, it is crucial to enhance the existing mixed models through the incorporation of multiphase fluid flow in porous media, the dynamics of the gas phase, interphase mass transfer mechanisms such as sorption, and biodegradation kinetics, in addition to accounting for soil properties and heterogeneity. By combining assumptions that are based on real-world bioventing systems, and reducing complexity and computational expense, this approach facilitates the creation of a more reliable tool for bioventing.
The study proposes an improved mixed model for industrial bioventing in vadose zones that considers gas phase flow in soil in the presence of immobile aqueous and NAPL phases, component transport in the phases, and biodegradation in the aqueous phase. The model incorporates soil properties through a rate constant correlation and soil heterogeneity to provide a reliable tool for predicting unsaturated bioventing closure time. Furthermore, the model can be utilized to investigate soil vapor extraction, gas flow dynamics in soil, and the effectiveness of injection and extraction wells, as well as to explore the effects of soil heterogeneity and variations in gas permeability. The proposed model is numerically implemented in OpenFOAM using the finite volume method and is adaptable to various geometries and boundary conditions in 3D simulation. The selection of the main assumptions for model development is discussed in detail in the model development section to enhance the model’s prediction accuracy while minimizing computational costs.
2. Different Mathematical Solutions of Bioventing Equations
The selection of an appropriate mathematical solution for a bioventing model is crucial for achieving accurate results within a reasonable computational time. This is particularly important when accounting for key elements of the bioventing process and aligning the model’s assumptions with specific research objectives. Various methods have been used in the past to solve these equations. Some of the key methods that may be discussed include analytical solutions, numerical solutions, and hybrid solutions.
Numerous studies have been conducted on the analytical solutions of bioventing equations, with a focus on resolving coupled component transport and reaction equations [
18,
20,
21,
22,
23]. However, it should be noted that analytical methods have a solution constraint when applied to models that incorporate multiple sets of equations such as phase flow, component transport, mass transfer, and biodegradation equations. This limitation necessitates the utilization of numerical methods or a combination of numerical and analytical methods (hybrid) to fully capture the complexity of the system under investigation.
Different numerical methods, including finite difference (FD), finite element (FE), and finite volume (FV), are commonly used to solve equations related to flow and transport in porous media [
24]. Each method has its own advantages and disadvantages, and it is crucial to consider these factors when selecting the most appropriate method for a particular study, considering the nature of the equations, goal of the research, and availability of necessary tools.
The FDM (finite difference method) is a widely used and versatile method for solving bioventing numerical model equations [
13,
16,
25], but it is not without its limitations. It is an efficient method that can be used to solve a wide range of problems. One of the main advantages of FDM is its simplicity and ease of implementation. The method involves dividing the domain of interest into a grid of discrete points and approximating the derivatives in the equations using the values at these points. This makes it straightforward to implement and can be applied to a wide range of equations. FDM, in the same way as any other approximation, has certain limitations, including oscillations and diffusion, particularly at discontinuous points. Additionally, FDM may encounter issues with conserving mass since it is mass conservative only when the grid spacing goes to zero and may have difficulty handling irregular shapes [
26,
27].
On the other hand, FE is a complex numerical method which has been widely used to solve the equations of flow and transport in porous media for decades [
14,
28,
29]. In some complex cases such as coupled flow and transport in porous media including interphase mass transfer and biodegradation, using FEM provides the option of combining different kinds of functions that approximate the solution of each equation within each element. This is referred to as mixed formulation [
4]. Compared to FDM, the FE method is quite capable of handling complex geometries and unstructured meshes [
30].
The main disadvantage of the classic FE method is that it is not mass conservative, which might cause difficulties in the convergence of the final code. Numerous studies have been conducted to improve classic FE and render it mass conservative [
31]. Regarding mass conservation, volume discretization approaches of FEM and FDM are more beneficial when compared to ordinary FE techniques. These methods are locally conservative, contrary to classic FE approaches. Although mixed FE approaches are locally mass conservative, they are not efficient. In nonlinear cases, which include large grid alterations, local mass conservation is significant to avoid considerable errors [
12].
The finite volume method (FVM) is a numerical method which converts partial differential equations illustrating conservation laws on differential volumes to discrete algebraic equations expanding on finite volumes, cells, or elements. To solve partial differential equations using FVM, first the domain should be discretized, similar to the first step in the finite element or finite difference methods. Then the geometric domain is discretized into finite volumes or elements which are not overlapped in the FVM technique. The partial differential equations are integrated over each discrete volume, and then converted to the set of algebraic equations. After that, the dependent variables are computed for each element, solving the set of algebraic equations. Some terms of conservation equations are transformed into face fluxes and, therefore, are assessed at the finite-volume faces [
32].
The FVM is strictly conservative, since the flux entering a volume is equal to the flux exiting the neighbouring volume. Therefore, FVM is preferable in computational fluid dynamics (CFD) due to this intrinsic conservation feature [
26]. The FVM is even applicable on unstructured polygonal meshes which is a significant advantage of this method. The FVM is easily applicable to various boundary conditions because the computations of unknown variables are carried out at the centroids of volume elements instead of their boundaries [
15,
32,
33]. Considering the above-mentioned attributes of the FV approach, it is a useful method to numerically simulate complex systems involving mass transfer, component transport, and fluid flow in porous media.
4. Model Implementation
The equations are mathematically solved using FVM in OpenFOAM which is an open-source coding toolbox for computational fluid dynamics (CFD) analysis. The utilization of OpenFOAM allows for the deployment of simulation on parallel computers and provides the advantage of unlimited customization through the extension of solvers, utilities, and libraries, with the prerequisite knowledge of the underlying method, physics, and programming techniques. The software is code-based, utilizing the C++ programming language, resulting in a highly flexible modeling environment, facilitating ease of adjustment of parameters and equations, as necessary.
Another significant benefit of this model is being dimensionally independent. OpenFOAM has automatic discretization of equations. This allows any solver to be used on 1D, 2D, or 3D meshes and models can be run by imposing user-defined meshes and geometry. Meshes and geometry can be created in OpenFOAM or in other software such as Fluent.
Simple Case Simulation
To show the efficiency of the proposed model and FVM in OpenFOAM, a simple case is simulated considering steady-state gas flow (constant velocity) and component mass balance in all three phases. The model’s solution was compared against the analytical solution by Huang and Goltz [
18].
Huang and Goltz [
18] proposed an analytical solution to model a SVE system. Considering the similar soil physics of SVE and bioventing systems, by adding a first-order kinetics term to the aqueous-phase component mass balance equation, the simulation was performed for bioventing.
A conceptual model of the application of SVE/bioventing in a contaminated vadose zone is presented in
Figure 1 based on the work of Huang and Goltz [
18]. An extraction well is located on the left-hand side of the mesh and air is extracted radially through this well. Contamination concentration in soil is homogeneous in an area with radius 50 m and depth of 3 m and the change in gas-phase concentration during the process is only radial (
Figure 1).
The vadose zone is composed of voids filled with air, water, and NAPL, where volatilized contaminant is extracted through a fully screened well. Meanwhile, dissolved and NAPL-phase contaminants volatilize into the gas phase. To mathematically describe the conceptual model, several assumptions were made. A steady, radially convergent gas flow field is induced by the extraction well, where water and NAPL phases are immobile, the transport of volatilized contaminants in the vadose zone is governed by advection, dispersion, and molecular diffusion, contaminant mass transfer between phases can be described by first-order kinetics, and first-order biodegradation of contaminant occurs in the aqueous phase.
Another assumption made by Huang and Goltz [
18] is that saturation of NAPLs is low; therefore, NAPL desaturation does not significantly affect gas- and water-phase saturations, which are assumed to be constant. However, in the FVM model, changes in the saturations of all the phases are considered and for the immobile phases (aqueous phase and NAPL phase), changes in saturations are only due to mass transfer and biodegradation (in the aqueous phase). In this case, a simple form of contaminant transport in bioventing was simulated and the code was incorporated in a 2D mesh in which the change in gas-phase concentration is radial only (1D).
5. Results and Discussion
When designing and implementing a bioventing process for a hydrocarbon-contaminated site, accurately predicting the closure time is of paramount importance for site owners and consultants. However, current commercial software tools for this purpose have limitations when simulating different cases. The presented model aims to provide a robust solution to these limitations by satisfying the following criteria:
Offering robustness and low computational cost by allowing for simulation of simple geometries on a personal computer;
Supporting any type of geometry and boundary conditions, as well as the option to run complex simulations on parallel computing cores and cloud-based systems;
Incorporating all relevant aspects of bioventing, including fluid flow in porous media in the presence of three phases, biodegradation kinetics, and component transport;
Incorporating soil properties through a biodegradation constant correlation that considers the effect of different soil types;
Providing flexibility to run simulations in 1D, 2D, and 3D;
Accounting for soil heterogeneity in complex systems, including different soil layers, variable soil permeability, and changes in soil moisture content;
Accounting for the effect of aged contamination;
The ability to simulate both SVE and bioventing.
The model is simulated in OpenFOAM for three separate time periods (1 day, 10 days, 30 days) to determine the concentration of contaminant present in the gas phase at 20 m (r
b in
Figure 1) from the extraction well. Thirty days is the duration of the experiments used to generate the calibrating data [
1]. The velocity of gas flow is calculated using Darcy’s equation, and it is presumed that alterations in saturations do not influence the velocity of the gas phase in the soil. The calculated Darcy’s velocity is then utilized to assess the component transport in the gas phase, which can be used to infer the concentration profile.
The analytical results of this study are based on the research of Huang and Goltz [
18]. The model equations are solved analytically by employing the Laplace transform method with respect to time. The solutions are depicted using confluent hypergeometric functions in the Laplace domain, and subsequently evaluated through a numerical Laplace inversion algorithm. These solutions enable the simulation of the spatial distribution and temporal evolution of contaminant concentrations that may arise during the operation of a SVE/bioventing well. The code is developed in MATLAB and represents the exact solution of the component transport equations by considering a steady-state constant gas velocity. Additionally, first-order kinetics are employed to represent biodegradation in the aqueous phase. All the relevant parameters and initial conditions used in both models are presented in
Table 1.
Figure 2 shows good consistency in trends with respect to time and space between the analytical solution and the developed model. The slight difference between results is due to a basic assumption which is made in the analytical method. Huang and Goltz [
18] assumed that the saturations of gas and aqueous phases do not change during the process which is a simplifying assumption to help develop the analytical solution. However, in the numerical FVM model, changes in saturations are accounted for and this probably caused the slight difference in results.
The standard error of regression (
SER) method is used to show how precise the model’s predictions are against the results of the analytical solution using the units of the dependent variable (mg/L).
N is number of values in each set;
in and
jn represent values of numerical results and analytical results, respectively.
The SER value indicates how far the data points are from the regression line on average. The result shows the error for cases of 1 day, 10 days, and 30 days as 10.4 (2.48%), 8.12 (2.37%), and 6.64 (2.08 %), respectively.
In the next phase of the research, a more comprehensive simulation will be performed to validate the model using independent sets of experimental data published by Khan and Zytner [
1,
41] and Mosco and Zytner [
42] by simulating bioventing in a larger cylindrical reactor in 3D. Furthermore, a comprehensive simulation will be conducted to analyze the impacts of soil heterogeneity and the aging of contamination on the bioventing closure time. To account for aged contaminated soil, a correlation developed by Mosco and Zytner [
42] will be employed to correlate the biodegradation rate constant, which will be integrated into the model. In addition, the reactor will be modeled with various permeable layers of soil to examine the heterogeneity of the system.
6. Conclusions
The foundation of a comprehensive bioventing model was developed to accurately predict closure time. After investigating various models and their assumptions, an improved mixed model for industrial bioventing in vadose zones is proposed that considers gas-phase flow in soil, immobile aqueous and NAPL phases, component transport, and biodegradation in the aqueous phase. Soil properties are incorporated through a degradation rate constant correlation and soil heterogeneity to provide a dependable tool for forecasting unsaturated bioventing closure time.
Selecting the appropriate numerical method to solve the model needs to be capable of addressing the intricacies of equations and geometry, a crucial element in the advancement of bioventing simulation. Comparing applications of different mathematical methods shows that FVM features such as mass conservation, applicability on unstructured polygonal meshes, and ease of implementing various boundary conditions make it the best choice to solve the proposed mathematical model. OpenFOAM was selected to implement the simulation due to its ability to deploy simulations on parallel computers, unlimited customization, flexibility, and dimensionally independent nature with automatic discretization of equations. These features allow for easy adjustment of parameters and equations as necessary and the ability to use any solver on 1D, 2D or 3D mesh with user-defined meshes and geometry.
A simple form of the foundational numerical model was simulated, and the results were compared to an analytical solution presenting a good match with errors less than 2.5%, showing the accuracy of mass-conservative FVM. This success shows the potential to build on the foundation model and incorporate additional scenarios.