From Weeds to Feeds: Exploring the Potential of Wild Plants in Horticulture from a Centuries-Long Journey to an AI-Driven Future
Abstract
:1. Introduction
2. Materials and Methods
2.1. Research Design and Approach
2.2. Gathering Ethnobotanical Knowledge in the Field
2.3. Building a Global Database of Wild Food Plants
2.4. Conceptual Analysis
2.5. Specific Models
2.6. Proposal for a Specialized Model Combining Multimodal Data
3. Results and Discussion
3.1. Literature Background—Concept of Wild Plants and Their Potential Use as a Novel Crop
3.1.1. Steps in the Concept of Wild Plants
3.1.2. Horticultural Perspective of the “Wild Plant”
- Post-cultivated wild plants, which merely extend a previously domesticated line but have been left uncultivated thereafter.
- Sub-spontaneous wild plants that originate in uncultivated soil from seeds of cultivated plants.
- Spontaneous wild plants that represent a natural element in the local flora. These spontaneous wild plants can, at least theoretically, have a triple origin:
- They may derive from sub-spontaneous wild plants that have found favorable conditions in the natural environment for a return to a wild state. We will refer to them as colonial wild plants.
- They may descend from ancestors that have never passed through the cultivated stage. We will refer to them as autochthonous, or indigenous, wild plants.
- Hybrid mixed wild plants. They may result from the hybridization of indigenous wild plants with either of the forms, and these are referred to as hybrid wild plants.
3.1.3. “Weeds” Versus “Invasive Species”
3.1.4. Weeds as Novel Crops
3.1.5. Indigenous Wild Plants Versus Weeds as Potential Novel Crops
3.2. Occurrences, Extension of Use, and Local Consensus for Selecting Wild Food Plant Species as Potential Crops
The Local Consensus Model for the Huerta de Murcia (Spain)
3.3. Analysis at Different Scales: A Comparison of Murcia and World Data
3.3.1. The Global Occurrence Patterns of Potential Crops
3.3.2. Integrating Diverse Sources of Evidence
3.4. Developing a General Model to Integrate Multimodal Data
3.4.1. Preliminary Considerations
3.4.2. Tools and Techniques Available
- Machine Learning Algorithms [57]: Supervised learning is useful for predicting outcomes based on labeled training data. Common algorithms include decision trees, random forests, support vector machines, and neural networks. Unsupervised learning helps in clustering and finding patterns in data without pre-existing labels. Algorithms like k-means clustering and hierarchical clustering can be used to group plants with similar traits.
- Natural Language Processing (NLP) [58]: Text mining and data extraction: Tools like NLTK [59] (it’s an open-source project developed and maintained by a community of contributors), spaCy [60] (it is an open-source project developed and maintained by a community of contributors), and BERT [61] (Google AI. While Google AI, Alphabet Inc., Mountain View, CA, USA) can extract relevant information about plant characteristics, nutritional value, health benefits, and cultivation requirements from the scientific literature, databases, and online resources. Sentiment analysis and entity recognition tools can be used to understand and categorize qualitative data from various sources.
- Geographic Information Systems (GISs): Spatial analysis, tools like ArcGIS (Esri, Redlands, CA, USA) and QGIS (it is developed by a global community of volunteers and is not affiliated with any specific company or country) can help analyze the geographic distribution of wild plants and their environmental conditions, providing insights into optimal growing regions. Remote sensing, satellites, and drones can gather data on land use, soil types, and climate conditions to support decision-making.
- Genomic and Bioinformatics Tools: Gene sequencing data analysis [62]: Tools like BLAST [63] (NCBI, Bethesda, MD, USA), ClustalW (its development and maintenance have been primarily carried out at the University of Cambridge in the United Kingdom), and Bioconductor (initially developed at the Fred Hutchinson Cancer Research Center in Seattle, WA, USA, it has since become a collaborative effort) can analyze genetic information to identify plants with desirable traits for breeding and cultivation. Genome-wide association studies (GWAS) (is not associated with a specific company or country) [64] are used to find correlations between genetic variants and traits of interest in plants.
- Big Data Platforms: Data storage and processing in platforms like Hadoop (the Apache Software Foundation, which oversees Hadoop’s and Spark’s development and governance, is a global collaboration of individuals and organizations), Spark, and Google Cloud (Google LLC, Mountain View, CA, USA) to manage and process large datasets efficiently. Data integration [65] with tools like KNIME (it’s a collaborative project involving researchers and developers from various institutions worldwide. The KNIME AG company, based in Switzerland, provides commercial support and additional features for enterprise users) and Alteryx (Alteryx, Inc. Irvine, CA, USA) can integrate data from multiple sources, including genomic, phenotypic, and environmental data.
- Decision Support Systems (DSSs) [66]: multi-criteria decision analysis (MCDA): Tools like DEXi (Dexi.io San Francisco, CA, USA) and PROMETHEE (it is not associated with a specific company or country) can evaluate multiple criteria to rank and select candidate species based on their suitability for cultivation. Expert systems: AI-driven systems that use rule-based approaches to simulate expert-level decision-making in selecting crop candidates.
- AI and Machine Learning Platforms: TensorFlow (Google Brain, a research division of Google AI, which is part of Alphabet Inc., the parent company of Google, Mountain View, CA, USA) [67] and PyTorch (Facebook AI Research (FAIR), Menlo Park, CA, USA) [68]: widely used frameworks for developing and deploying machine learning models. AutoML Tools [69,70]: tools like Google AutoML (Google Cloud, Alphabet Inc., Mountain View, CA, USA) and H2O.ai (H2O.ai, Mountain View, California, Estados Unidos) [71] automate the process of model selection, hyperparameter tuning, and feature engineering.
- Data Visualization Tools [72]: Visualization libraries: libraries like Matplotlib (it is not associated with a specific company or country) [73], Seaborn (it is an open-source project developed and maintained by a community of contributors) [74], and Plotly (Plotly, Inc., Montreal, QC, Canada) [75] in Python (it was created by Guido van Rossum in the late 1980s and released to the public in 1991) can create insightful visualizations to interpret complex data. Interactive dashboards: tools like Tableau (Salesforce, Seattle, WA, USA) and Power BI (Microsoft Power Platform, Microsoft Corporation, Redmond, WA, USA) [76] can create interactive dashboards to help stakeholders understand the data and results.
- Collaborative Platforms and Research Collaboration Tools [77]: Platforms like GitHub (GitHub, San Francisco, CA, USA. It was acquired by Microsoft in 2018) [78] and Jupyter Notebooks (Jupyter Notebooks don’t have a specific physical location) [79] facilitate collaboration among researchers by enabling code sharing and collaborative data analysis.
3.4.3. Critical Points
- Multimodal Data Integration: The model must build a coherent data system integrating ecological (environmental conditions where the species thrive, such as soil type, climate, and geographic distribution), genetic (genomic information to understand the genetic diversity, adaptation mechanisms, and potential for breeding), agronomic (growth rates, yield potential, resistance to pests and diseases, and watering requirements) [80], socioeconomic (local and global market demand, cultural importance, and economic viability), ethnobotanical (historical and traditional uses of the species, including medicinal, nutritional, and cultural significance), nutritional, toxicological, and pharmacological data (active substances present, their relative abundance and their physiological and pharmacological properties in humans and livestock) [81].
- AI Techniques: Machine learning supervised and unsupervised learning algorithms to identify patterns and make predictions based on integrated data. Deep learning, neural networks for complex data analysis, such as image recognition of plant species or genomic data interpretation [82]. Natural language processing (NLP) [83] to analyze textual data from the scientific literature, reports, and ethnobotanical records. Geospatial analysis, GIS, and remote sensing data to map species distribution and environmental conditions.
- Model Development: Feature selection, identifying the most relevant variables from the multimodal data that influence the potential of species as crops. Model training using historical data to train AI models to predict the suitability and potential productivity of plant species. Cross-validation and testing with independent datasets to ensure model accuracy and reliability.
3.4.4. Key Steps
- Data collection and preprocessing: Gather data from various sources, including ecological databases, genetic repositories, agronomic trials, and socioeconomic surveys. Clean and preprocess the data to manage missing values, normalize scales, and encode categorical variables.
- Feature Engineering: derive new features that capture interactions between diverse types of data, such as genotype–environment interactions or socio-economic factors influencing plant use. Use domain knowledge to guide feature selection and ensure meaningful variables are included.
- Model Selection: Start with basic machine learning models (e.g., decision trees [84], random forests [85]) to establish baselines. Progress to more complex models (e.g., neural networks [86], ensemble methods [87]) for improved accuracy and robustness. Implement geospatial models to incorporate environmental data effectively.
- Training and Validation: Split the data into training and validation sets. Train the model on the training set, using cross-validation techniques to fine-tune hyperparameters. Validate the model on the validation set, iterating to improve performance.
- Deployment, Monitoring, and Updating: Deployment involves implementing the AI model in a practical and accessible format, such as a software application or online platform so that stakeholders—such as researchers, practitioners, or decision-makers—can easily interact with and utilize the model. The goal is to make the AI tool user-friendly, ensuring that it meets the needs of its intended audience and integrates smoothly into their workflows. Monitoring involves evaluating its accuracy, efficiency, and overall effectiveness as it processes new data. Continuous monitoring helps to identify any issues or discrepancies that may arise and ensures that the model remains reliable and relevant. Updating involves regularly refining the model based on performance evaluations and new information to maintain its relevance and effectiveness.
- Case Studies and Pilot Projects: Conduct case studies or pilot projects to validate the model using real-world scenarios and gather feedback from agronomists, farmers, and other stakeholders to refine the model and its application.
4. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Basic Codes | Basic Categories | Notes |
---|---|---|
A | Post-cultivated wild plants | Remains of perennial crops in abandoned fields occupied by natural vegetation |
B | Sub-spontaneous wild plants | Natural habitats suitable for the species and close to crop fields |
C | Spontaneous wild plants | Natural habitats |
D | Colonial wild plants (subset of spontaneous) | Natural habitats |
E | Autochthonous or indigenous wild plants (subset of spontaneous) | Natural habitats |
F | Hybrid mixed wild plants | Natural habitats |
G 1 | Domesticated cultivated plants | Cropland |
Coded relationships | Relationships between Categories 2 | |
C = D ∪ E | Spontaneous wild plants are the union of colonial and autochthonous wild plants | |
D ∩ E = ∅ | Colonial and autochthonous wild plants are mutually exclusive | |
A ∩ B = ∅ | Post-cultivated and sub-spontaneous wild plants are mutually exclusive | |
A ∩ C = ∅ | Post-cultivated and spontaneous wild plants are mutually exclusive | |
B ∩ C = ∅ | Sub-spontaneous wild plants and spontaneous wild plants and are mutually exclusive. | |
A ∪ B ⊆ G 1 | All post-cultural and Sub-spontaneous wild plants are domesticated plants, despite their wild appearance. | |
F = (G 1 ∩ E) ∪ (E ∩ D) | Relationship of hybrid wild plants with other categories |
Theme | Features | Weed 1 | Invasive 1 |
---|---|---|---|
Reproductive Strategy | Exhibit a high reproductive capacity (R-strategists), allowing them to establish and spread rapidly in various environments. | Yes | Yes |
Ability to Compete | Can outcompete native or desirable plants for resources such as light, water, and nutrients. | Yes | Yes |
Adaptability | Tendency to be highly adaptable to different environmental conditions, enabling them to thrive in a variety of habitats | Yes | Yes |
Habitat Occupancy | Primarily associated with disturbed or cultivated areas, competing with crops or desirable plants in human-altered landscapes | Yes | Not |
Ecological Impact | Often considered nuisances in agricultural settings, impacting crop yields and quality and sometimes damage infrastructure | Yes | Not |
Human Perception | Generally perceived as unwanted plants in cultivated areas | Yes | Not |
Management Approach | Control measures often include herbicide application, cultivation practices, or manual removal, including collection as food for humans or livestock | Yes | Not |
Ecological Impact | Can have broader ecological impacts, leading to the decline or displacement of native species and disruption of ecosystem functions. They may alter habitat structures, nutrient cycles, and community compositions, affecting the overall biodiversity. | Not | Yes |
Human Perception | These are also generally perceived as unwanted plants, but in natural environments. The preservation of native biodiversity is a fundamental goal of conservation biology. Invasive species can contribute to the decline of native species, making their management essential for maintaining healthy ecosystems | Not | Yes |
Management Approach | Management may involve a more comprehensive ecological approach, considering the restoration of native habitats and the prevention of further spread. | Not | Yes |
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Rivera, D.; Rivera-Obón, D.-J.; Palazón, J.-A.; Obón, C. From Weeds to Feeds: Exploring the Potential of Wild Plants in Horticulture from a Centuries-Long Journey to an AI-Driven Future. Horticulturae 2024, 10, 1021. https://doi.org/10.3390/horticulturae10101021
Rivera D, Rivera-Obón D-J, Palazón J-A, Obón C. From Weeds to Feeds: Exploring the Potential of Wild Plants in Horticulture from a Centuries-Long Journey to an AI-Driven Future. Horticulturae. 2024; 10(10):1021. https://doi.org/10.3390/horticulturae10101021
Chicago/Turabian StyleRivera, Diego, Diego-José Rivera-Obón, José-Antonio Palazón, and Concepción Obón. 2024. "From Weeds to Feeds: Exploring the Potential of Wild Plants in Horticulture from a Centuries-Long Journey to an AI-Driven Future" Horticulturae 10, no. 10: 1021. https://doi.org/10.3390/horticulturae10101021
APA StyleRivera, D., Rivera-Obón, D. -J., Palazón, J. -A., & Obón, C. (2024). From Weeds to Feeds: Exploring the Potential of Wild Plants in Horticulture from a Centuries-Long Journey to an AI-Driven Future. Horticulturae, 10(10), 1021. https://doi.org/10.3390/horticulturae10101021