Efforts to Identify and Combat Antimicrobial Resistance in Uganda: A Systematic Review
Abstract
:1. Introduction
2. Materials and Methods
2.1. Systematic Literature Search
2.2. Selection of Papers
2.3. Data Analysis
3. Results
Study Characteristics
4. Discussion
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Resistance Type | Number of Articles | AMR Context | Study Design | Output | |||||
---|---|---|---|---|---|---|---|---|---|
Human | Veterinary/Animal | One Health | Field Study | Lab Study | Surveillance or Susceptibility | Resistance Genes | Policy | ||
Antibacterial | 91 | 73 | 12 | 6 | 82 | 9 | 66 | 25 | 0 |
Antimalarial | 68 | 68 | 0 | 0 | 67 | 1 | 13 | 55 | 0 |
Antiviral | 3 | 3 | 0 | 0 | 3 | 0 | 0 | 3 | 0 |
Antifungal | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
Total | 163 | 145 | 12 | 6 | 153 | 10 | 80 | 83 | 0 |
Resistance Type | Target Pathogen | Number of Studies | Examples of Resistance Genes Identified |
---|---|---|---|
Antibacterial | E. coli | 7 | blaCTX-M, blaACT, arnA, integrons class 1 and 2, qnrS1, tetA, tetB, sul2, blaSHV, blaTEM |
Staphylococcus spp. | 8 | spa types t064, t037, SCCmec types I and IV, mecA, aac(6′)-Ie-aph(2′’)-Ia, aph(3′)-IIIa, ant(4′)-Ia, blaZ, mecA, vanA, vanB1 | |
Streptococcus spp. | 3 | dihydropteroate synthase (DHPS) and dihydrofolate reductase (DHFR), folA and folP genes, | |
Salmonella spp. | 2 | blaTEM-1,cmlA, tetA, qnrS, sul1, dhfrI, dhfrVII | |
Mycobacterium spp. | 5 | Mutation gyrA Genotype Uganda I and II has Thr80Ala (acc/gcc), rpoB gene mutations | |
Klebsiella spp. | 1 | blaCTX-M, blaSHV, blaTEM | |
Enterococcus spp. | 1 | EBC, FOX, ACC, CIT, DHA, MOX | |
Antimalarial | Plasmodium falciparum | 55 | Pfmdr1 N86Y, Y184F and D1246Y, Pfpm2, PfKelch13, plasmepsin2 gene, pfcrt 76T, Pfdhfr, Pfdhps |
Antiviral | Hepatitis C virus | 1 | g4 and g7 strains contain nonstructural (ns) protein 3 and 5A polymorphisms associated with resistance to DAAs |
Hepatitis B virus | 1 | rtM204V/I mutations | |
HIV | 1 | Thymidine analog mutations, M184V |
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Kivumbi, M.T.; Standley, C.J. Efforts to Identify and Combat Antimicrobial Resistance in Uganda: A Systematic Review. Trop. Med. Infect. Dis. 2021, 6, 86. https://doi.org/10.3390/tropicalmed6020086
Kivumbi MT, Standley CJ. Efforts to Identify and Combat Antimicrobial Resistance in Uganda: A Systematic Review. Tropical Medicine and Infectious Disease. 2021; 6(2):86. https://doi.org/10.3390/tropicalmed6020086
Chicago/Turabian StyleKivumbi, Mark Tefero, and Claire J. Standley. 2021. "Efforts to Identify and Combat Antimicrobial Resistance in Uganda: A Systematic Review" Tropical Medicine and Infectious Disease 6, no. 2: 86. https://doi.org/10.3390/tropicalmed6020086
APA StyleKivumbi, M. T., & Standley, C. J. (2021). Efforts to Identify and Combat Antimicrobial Resistance in Uganda: A Systematic Review. Tropical Medicine and Infectious Disease, 6(2), 86. https://doi.org/10.3390/tropicalmed6020086