13 February 2023
Proteomes | Top 20 Most Viewed Papers in 2022

1. “Survey of Anti-Pathogen Antibody Levels in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome”
by Adam J. O'Neal, Katherine A. Glass, Christopher J. Emig, Adela A. Vitug, Steven J. Henry, Dikoma C. Shungu, Xiangling Mao, Susan M. Levine and Maureen R. Hanson
Proteomes 2022, 10(2), 21; https://doi.org/10.3390/proteomes10020021
Available online: https://www.mdpi.com/2227-7382/10/2/21 

2. “Potential Tear Biomarkers for the Diagnosis of Parkinson’s Disease—A Pilot Study”
by Arantxa Acera, Juan Carlos Gómez-Esteban, Ane Murueta-Goyena, Marta Galdos, Mikel Azkargorta, Felix Elortza, Noelia Ruzafa, Oliver Ibarrondo, Xandra Pereiro and Elena Vecino
Proteomes 2022, 10(1), 4; https://doi.org/10.3390/proteomes10010004
Available online: https://www.mdpi.com/2227-7382/10/1/4 

3. “Shotgun Proteomics as a Powerful Tool for the Study of the Proteomes of Plants, Their Pathogens, and Plant–Pathogen Interactions”
by Sadegh Balotf, Richard Wilson, Robert S. Tegg, David S. Nichols and Calum R. Wilson
Proteomes 2022, 10(1), 5; https://doi.org/10.3390/proteomes10010005
Available online: https://www.mdpi.com/2227-7382/10/1/5 

4. “Wheat Proteomics for Abiotic Stress Tolerance and Root System Architecture: Current Status and Future Prospects”
by Tanushree Halder, Mukesh Choudhary, Hui Liu, Yinglong Chen, Guijun Yan and Kadambot H. M. Siddique
Proteomes 2022, 10(2), 17; https://doi.org/10.3390/proteomes10020017
Available online: https://www.mdpi.com/2227-7382/10/2/17 

5. “Insights on Proteomics-Driven Body Fluid-Based Biomarkers of Cervical Cancer”
by Amrita Mukherjee, Chinmayi Bhagwan Pednekar, Siddhant Sujit Kolke, Megha Kattimani, Subhiksha Duraisamy, Ananya Raghu Burli, Sudeep Gupta and Sanjeeva Srivastava
Proteomes 2022, 10(2), 13; https://doi.org/10.3390/proteomes10020013
Available online: https://www.mdpi.com/2227-7382/10/2/13 

6. “Multi-Omics Integrative Approach of Extracellular Vesicles: A Future Challenging Milestone”
by Enxhi Shaba, Lorenza Vantaggiato, Laura Governini, Alesandro Haxhiu, Guido Sebastiani, Daniela Fignani, Giuseppina Emanuela Grieco, Laura Bergantini, Luca Bini and Claudia Landi
Proteomes 2022, 10(2), 12; https://doi.org/10.3390/proteomes10020012
Available online: https://www.mdpi.com/2227-7382/10/2/12 

7. “Data-Independent Acquisition Enables Robust Quantification of 400 Proteins in Non-Depleted Canine Plasma”
by Halley Gora Ravuri, Zainab Noor, Paul C Mills, Nana Satake and Pawel Sadowski
Proteomes 2022, 10(1), 9; https://doi.org/10.3390/proteomes10010009
Available online: https://www.mdpi.com/2227-7382/10/1/9 

8. “Comparison of Different Label-Free Techniques for the Semi-Absolute Quantification of Protein Abundance”
by Aarón Millán-Oropeza, Mélisande Blein-Nicolas, Véronique Monnet, Michel Zivy and Céline Henry
Proteomes 2022, 10(1), 2; https://doi.org/10.3390/proteomes10010002
Available online: https://www.mdpi.com/2227-7382/10/1/2 

9. “Applications of Proteomics in Ovarian Cancer: Dawn of a New Era”
by Aruni Ghos, Sri Vidya Niharika Gullapalli, Naila Chohan, Anita Bolina, Michele Moschetta, Elie Rassy and Stergios Boussios
Proteomes 2022, 10(2), 16; https://doi.org/10.3390/proteomes10020016
Available online: https://www.mdpi.com/2227-7382/10/2/16 

10. “Standard Flow Multiplexed Proteomics (SFloMPro)—An Accessible Alternative to NanoFlow Based Shotgun Proteomics”
by Benjamin C. Orsburn, Sierra D. Miller and Conor J. Jenkins
Proteomes 2022, 10(1), 3; https://doi.org/10.3390/proteomes10010003
Available online: https://www.mdpi.com/2227-7382/10/1/3 

11. “A Comparison of Blood Plasma Small Extracellular Vesicle Enrichment Strategies for Proteomic Analysis”
by Natalie P. Turner, Pevindu Abeysinghe, Keith A. Kwan Cheung, Kanchan Vaswani, Jayden Logan, Pawel Sadowski and Murray D. Mitchell
Proteomes 2022, 10(2), 19; https://doi.org/10.3390/proteomes10020019
Available online: https://www.mdpi.com/2227-7382/10/2/19 

12. “Molecular Dynamics Study of Citrullinated Proteins Associated with the Development of Rheumatoid Arthritis”
by Amir Taldaev, Vladimir Rudnev, Liudmila Kulikova, Kirill Nikolsky, Alexander Efimov, Kristina Malsagova and Anna Kaysheva
Proteomes 2022, 10(1), 8; https://doi.org/10.3390/proteomes10010008
Available online: https://www.mdpi.com/2227-7382/10/1/8 

13. “Quantitative Proteogenomic Characterization of Inflamed Murine Colon Tissue Using an Integrated Discovery, Verification, and Validation Proteogenomic Workflow”
by Andrew T. Rajczewski, Qiyuan Han, Subina Mehta, Praveen Kumar, Pratik D. Jagtap, Charles G. Knutson, James G. Fox, Natalia Y. Tretyakova and Timothy J. Griffin
Proteomes 2022, 10(2), 11; https://doi.org/10.3390/proteomes10020011
Available online: https://www.mdpi.com/2227-7382/10/2/11 

14. “Pattern Analysis of Organellar Maps for Interpretation of Proteomic Data”
by Jordan B. Burton, Nicholas J. Carruthers, Zhanjun Hou, Larry H. Matherly and Paul M. Stemmer
Proteomes 2022, 10(2), 18; https://doi.org/10.3390/proteomes10020018
Available online: https://www.mdpi.com/2227-7382/10/2/18 

15. “Bovine Peripheral Blood Derived Lymphocyte Proteome and Secretome Show Divergent Reaction of Bovine Immune Phenotypes after Stimulation with Pokeweed Mitogen”
by Kristina J. H. Kleinwort, Roxane L. Degroote, Sieglinde Hirmer, Lucia Korbonits, Lea Lorenz, Armin M. Scholz, Stefanie M. Hauck and Cornelia A. Deeg
Proteomes 2022, 10(1), 7; https://doi.org/10.3390/proteomes10010007
Available online: https://www.mdpi.com/2227-7382/10/1/7 

16. “Proteomes of Uropathogenic Escherichia coli Growing in Human Urine and in J82 Urinary Bladder Cells”
by Sisse Andersen, Arkadiusz Nawrocki, Andreas Eske Johansen, Ana Herrero-Fresno, Vanesa García Menéndez, Jakob Møller-Jensen and John Elmerdahl Olsen
Proteomes 2022, 10(2), 15; https://doi.org/10.3390/proteomes10020015
Available online: https://www.mdpi.com/2227-7382/10/2/15 

17. “Proteomic Discovery and Validation of Novel Fluid Biomarkers for Improved Patient Selection and Prediction of Clinical Outcomes in Alzheimer’s Disease Patient Cohorts”
by Shivangi Awasthi, Daniel S. Spellman and Nathan G. Hatcher
Proteomes 2022, 10(3), 26; https://doi.org/10.3390/proteomes10030026
Available online: https://www.mdpi.com/2227-7382/10/3/26 

18. “Transcriptional and Epigenetic Factors Associated with Early Thrombosis of Femoral Artery Involved in Arteriovenous Fistula”
by Vikrant Rai and Devendra K. Agrawal
Proteomes 2022, 10(2), 14; https://doi.org/10.3390/proteomes10020014
Available online: https://www.mdpi.com/2227-7382/10/2/14 

19. “Integrative Proteomic and Phosphoproteomic Analyses of Hypoxia-Treated Pulmonary Artery Smooth Muscle Cells”
by Ang Luo, Rongrong Hao, Xia Zhou, Yangfan Jia and Haiyang Tang
Proteomes 2022, 10(3), 23; https://doi.org/10.3390/proteomes10030023
Available online: https://www.mdpi.com/2227-7382/10/3/23 

20. “Potential Satellite Cell-Linked Biomarkers in Aging Skeletal Muscle Tissue: Proteomics and Proteogenomics to Monitor Sarcopenia”
by Diego Fernández-Lázaro, Evelina Garrosa, Jesús Seco-Calvo and Manuel Garrosa
Proteomes 2022, 10(3), 29; https://doi.org/10.3390/proteomes10030029
Available online: https://www.mdpi.com/2227-7382/10/3/29

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