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Keywords = Decapterus tabl

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14 pages, 4829 KiB  
Article
Otolith Morphometric and Shape Distinction of Three Redfin Species under the Genus Decapterus (Teleostei: Carangidae) from Sulu Sea, Philippines
by Christian James C. Morales, Kyle Dominic E. Barnuevo, Emmanuel S. Delloro, Roxanne A. Cabebe-Barnuevo, Jenylle Kate S. Calizo, Sanny David P. Lumayno and Ricardo P. Babaran
Fishes 2023, 8(2), 95; https://doi.org/10.3390/fishes8020095 - 5 Feb 2023
Cited by 15 | Viewed by 6082
Abstract
Otoliths are paired calcified structures in the inner ear of teleosts that function in hearing and balance. In this study, the use of otolith morphometrics and shape analysis were explored to delineate the redfin species under the genus Decapterus from the Sulu Sea, [...] Read more.
Otoliths are paired calcified structures in the inner ear of teleosts that function in hearing and balance. In this study, the use of otolith morphometrics and shape analysis were explored to delineate the redfin species under the genus Decapterus from the Sulu Sea, Philippines, namely, Decapterus kurroides, D. smithvanizi, and D. tabl. Results showed that the mean otolith shapes are unique within species (p < 0.001). The otolith size-related (OW—otolith weight, OL—otolith length, OH—otolith height, OA—otolith area, and OP—otolith perimeter) and shape-related (RE—rectangularity, SQ—squareness, EL—ellipticity, RO—roundness, AR—aspect ratio, FF—form factor, CO—compactness, and CI—circularity) morphometric indices also showed significant variations (p < 0.001) among the three species. Distinct regions differentiating D. kurroides from the other two species were seen along the dorsal margin of the otoliths, which was supported by its significantly higher values for OH (size-related index) and RO (shape-related index). In addition, the morphometric indices showed significant variations (p < 0.001), except for RE. Furthermore, it was revealed that the size-related indices were able to separate D. kurroides from the other two species, which turned out to be indifferent. The results provided relevant data on the use of otoliths as an additional confirmatory tool in species delineation of the identified redfin species, and, therefore, offer opportunities of applying the same method in delineation and, eventually, identification of species from other genera, especially those that closely resemble each other. Full article
(This article belongs to the Special Issue Otoliths and Their Applications in Fishery Science II)
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17 pages, 15976 KiB  
Article
Complete Mitogenomes of Three Carangidae (Perciformes) Fishes: Genome Description and Phylogenetic Considerations
by Zhenhai Li, Min Li, Shannan Xu, Li Liu, Zuozhi Chen and Keshu Zou
Int. J. Mol. Sci. 2020, 21(13), 4685; https://doi.org/10.3390/ijms21134685 - 30 Jun 2020
Cited by 18 | Viewed by 3977
Abstract
Carangidae are ecologically and economically important marine fish. The complete mitogenomes of three Carangidae species (Alectis indicus, Decapterus tabl, and Alepes djedaba) were sequenced, characterized, and compared with 29 other species of the family Carangidae in this study. The [...] Read more.
Carangidae are ecologically and economically important marine fish. The complete mitogenomes of three Carangidae species (Alectis indicus, Decapterus tabl, and Alepes djedaba) were sequenced, characterized, and compared with 29 other species of the family Carangidae in this study. The length of the three mitogenomes ranged from 16,530 to 16,610 bp, and the structures included 2 rRNA genes (12S rRNA and 16S rRNA), 1 control region (a non-coding region), 13 protein-coding genes, and 22 tRNA genes. Among the 22 tRNA genes, only tRNA-Ser (GCT) was not folded into a typical cloverleaf secondary structure and had no recognizable DHU stem. The full-length sequences and protein-coding genes (PCGs) of the mitogenomes of the three species all had obvious AT biases. The majority of the AT-skew and GC-skew values of the PCGs among the three species were negative, demonstrating bases T and C were more plentiful than A and G. Analyses of Ka/Ks and overall p-genetic distance demonstrated that ATP8 showed the highest evolutionary rate and COXI/COXII were the most conserved genes in the three species. The phylogenetic tree based on PCGs sequences of mitogenomes using maximum likelihood and Bayesian inference analyses showed that three clades were divided corresponding to the subfamilies Caranginae, Naucratinae, and Trachinotinae. The monophyly of each superfamily was generally well supported. The divergence time analyses showed that Carangidae evolved during three geological periods, the Cretaceous, Paleogene, and Neogene. A. indicus began to differentiate from other species about 27.20 million years ago (Mya) in the early Miocene, while D. tabl (21.25 Mya) and A. djedaba (14.67 Mya) differentiated in the middle Oligocene. Full article
(This article belongs to the Section Biochemistry)
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17 pages, 3768 KiB  
Article
Hypoxia-Inducible Factor Inhibitors Derived from Marine Products Suppress a Murine Model of Neovascular Retinopathy
by Chiho Shoda, Yukihiro Miwa, Kazumi Nimura, Kazutoshi Okamoto, Satoru Yamagami, Kazuo Tsubota and Toshihide Kurihara
Nutrients 2020, 12(4), 1055; https://doi.org/10.3390/nu12041055 - 10 Apr 2020
Cited by 19 | Viewed by 4607
Abstract
Neovascular retinal degenerative diseases are the leading causes of blindness in developed countries. Anti-vascular endothelial growth factor (VEGF) therapy is commonly used to treat these diseases currently. However, recent reports indicate that long term suppression of VEGF in the eye is associated with [...] Read more.
Neovascular retinal degenerative diseases are the leading causes of blindness in developed countries. Anti-vascular endothelial growth factor (VEGF) therapy is commonly used to treat these diseases currently. However, recent reports indicate that long term suppression of VEGF in the eye is associated with chorioretinal atrophy. Therefore, a physiological amount of VEGF is required for retinal homeostasis. Hypoxia-inducible factor (HIF) is a transcriptional factor upstream of VEGF. We previously reported that HIF regulated pathological angiogenesis in the retina of murine models of oxygen-induced retinopathy and laser-induced choroidal neovascularization. Most of the known HIF inhibitors are anti-cancer agents which may have systemic adverse effects in for clinical use; thus, there is a need for safer and less invasive HIF inhibitors. In this study, we screened marine products, especially fish ingredients, and found that six species of fish had HIF inhibitory effects. Among them, administration of Decapterus tabl ingredients significantly suppressed retinal neovascular tufts by inhibiting HIF expression in a murine oxygen-induced retinopathy model. These results indicate that particular fish ingredients can act as anti-angiogenic agents in retinal neovascularization diseases. Full article
(This article belongs to the Special Issue Nutritional Support for Eye and Vision Health)
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