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173 Results Found

  • Feature Paper
  • Article
  • Open Access
12 Citations
4,761 Views
16 Pages

1 December 2018

Lateralisation of eye use indicates differential specialisation of the brain hemispheres. We tested eye use by zebra finches to view a model predator, a monitor lizard, and compared this to eye use to view a non-threatening visual stimulus, a jar. We...

  • Article
  • Open Access
592 Views
11 Pages

Description of the Seminiferous Epithelium Cycle Stages in the Zebra Finch Taeniopygia guttata

  • Tatiana Bikchurina,
  • Daria Rubtsova,
  • Daria Odnoprienko,
  • Pavel Borodin,
  • Anna Torgasheva and
  • Lyubov Malinovskaya

27 November 2025

Spermatogenesis in passerine birds remains poorly characterized. Previous studies focused on the steps of spermiogenesis, while a detailed staging of the seminiferous epithelium cycle is still lacking for this order. In this study, we provide the fir...

  • Article
  • Open Access
23 Citations
7,913 Views
17 Pages

The Genome of Blue-Capped Cordon-Bleu Uncovers Hidden Diversity of LTR Retrotransposons in Zebra Finch

  • Jesper Boman,
  • Carolina Frankl-Vilches,
  • Michelly da Silva dos Santos,
  • Edivaldo H. C. de Oliveira,
  • Manfred Gahr and
  • Alexander Suh

13 April 2019

Avian genomes have perplexed researchers by being conservative in both size and rearrangements, while simultaneously holding the blueprints for a massive species radiation during the last 65 million years (My). Transposable elements (TEs) in bird gen...

  • Article
  • Open Access
6 Citations
3,737 Views
21 Pages

Transcriptomics of Parental Care in the Hypothalamic–Septal Region of Female Zebra Finch Brain

  • Rashmi Kumari,
  • Emese A. Fazekas,
  • Boglárka Morvai,
  • Edina B. Udvari,
  • Fanni Dóra,
  • Gergely Zachar,
  • Tamás Székely,
  • Ákos Pogány and
  • Árpád Dobolyi

24 February 2022

(1) Background: The objective of this study was to uncover genomic causes of parental care. Since birds do not lactate and, therefore, do not show the gene expressional changes required for lactation, we investigate gene expression associated with pa...

  • Article
  • Open Access
1 Citations
1,755 Views
19 Pages

This study proposes a side-scan sonar target detection technique for CPU or low-performance GPU to meet the requirement of underwater target detection. To rectify the gray distribution of the original side scan sonar data, enhance picture segmentatio...

  • Review
  • Open Access
71 Citations
8,582 Views
38 Pages

Roadmap on Recent Progress in FINCH Technology

  • Joseph Rosen,
  • Simon Alford,
  • Vijayakumar Anand,
  • Jonathan Art,
  • Petr Bouchal,
  • Zdeněk Bouchal,
  • Munkh-Uchral Erdenebat,
  • Lingling Huang,
  • Ayumi Ishii and
  • Hongqiang Zhou
  • + 16 authors

29 September 2021

Fresnel incoherent correlation holography (FINCH) was a milestone in incoherent holography. In this roadmap, two pathways, namely the development of FINCH and applications of FINCH explored by many prominent research groups, are discussed. The curren...

  • Article
  • Open Access
1,086 Views
18 Pages

13 June 2025

In recent years, many academics have addressed the issue of the intersection of the fields of Biblical studies and Cultural studies. Many academic works have emphasized the importance of the Bible in the building of cultural narratives and the need t...

  • Article
  • Open Access
1 Citations
4,085 Views
12 Pages

Relative Water Economy Is a Useful Index of Aridity Tolerance for Australian Poephiline Finches

  • Philip C. Withers,
  • Christine E. Cooper and
  • Alexander N. Larcombe

31 March 2022

We evaluate if the iconic Australian Zebra Finch (Taeniopygia guttata) has a unique physiology or if its metabolic, thermal and hygric physiology are similar to other Australian poephiline finches, by comparing it with three other species, the arid-h...

  • Article
  • Open Access
4 Citations
4,870 Views
14 Pages

Isotopic Niche Segregation among Darwin’s Finches on Santa Cruz Island, Galápagos

  • Mariana Villegas,
  • Catherine Soos,
  • Gustavo Jiménez-Uzcátegui,
  • Shukri Matan and
  • Keith A. Hobson

30 March 2021

Darwin’s finches are a classic example of adaptive radiation involving differential use of dietary resources among sympatric species. Here, we apply stable isotope (δ13C, δ15N, and δ2H) analyses of feathers to examine ecological segregation among eig...

  • Case Report
  • Open Access
854 Views
6 Pages

Mycobacterium avium subsp. hominissuis (MAH) is a zoonotic pathogen with a broad host range and diverse clinical manifestations. We report here the first documented case of MAH-induced fatal vasculitis in zebra finch (Taeniopygia guttata). Histopatho...

  • Article
  • Open Access
10 Citations
5,678 Views
14 Pages

Effects of Night Illumination on Behavior, Body Mass and Learning in Male Zebra Finches

  • Abhilash Prabhat,
  • Mayank Kumar,
  • Ashwani Kumar,
  • Vinod Kumar and
  • Sanjay K. Bhardwaj

12 November 2021

An increase in artificial night lighting has blurred the boundaries of day and night and transformed the natural day-night environment with alteration in the temporal niche of the animals. Male zebra finches were exposed to a dim light at night (dLAN...

  • Review
  • Open Access
1,710 Views
35 Pages

This comprehensive review examines FINCHES (Force field-based Interaction Network for Characterizing Heterotypic and Entropic Sequences). This groundbreaking computational framework enables the rapid, sequence-based prediction of intermolecular inter...

  • Review
  • Open Access
33 Citations
10,379 Views
17 Pages

The Ecology of the Zebra Finch Makes It a Great Laboratory Model but an Outlier amongst Passerine Birds

  • Simon C. Griffith,
  • Riccardo Ton,
  • Laura L. Hurley,
  • Callum S. McDiarmid and
  • Hector Pacheco-Fuentes

1 February 2021

Zebra Finches have become the most widely researched bird species outside of those used in agricultural production. Their adoption as the avian model of choice is largely down to a number of characteristics that make them easy to obtain and use in ca...

  • Article
  • Open Access
1 Citations
1,157 Views
11 Pages

Prenatal Valproic Acid Exposure Affects Song Learning in Zebra Finches: A Potential Model for Vocal Development in Autism

  • Estifanos Ghebrihiwet Tewelde,
  • Boglárka Morvai,
  • Gergely Zachar and
  • Ákos Pogány

1 July 2025

Autism spectrum disorder (ASD) encompasses a range of neurodevelopmental conditions characterized by impairments in social abilities and communication. Studying appropriate animal models can enhance our understanding of the neural mechanisms underlyi...

  • Article
  • Open Access
1 Citations
1,269 Views
15 Pages

14 January 2025

Conspicuousness increases the risk of predation. One strategy to reduce this risk is to increase vigilance. We investigated the frequency of head movements as a measure of vigilance at waterholes in two related songbird species that differed in their...

  • Article
  • Open Access
2 Citations
2,852 Views
12 Pages

Enclosure Background Preferences Differ between Sexes and Color Morphs in the Gouldian Finch

  • Robert I. Moise,
  • Georgina R. Eccles and
  • Claudia Mettke-Hofmann

15 April 2023

Most wild animals camouflage well into their environment, providing protection from predators, whereas captive animals often contrast with their background. This can cause stress for the animal, which may perceive it as being exposed. Theory suggests...

  • Article
  • Open Access
13 Citations
4,031 Views
14 Pages

Artificial Light at Night Increases Recruitment of New Neurons and Differentially Affects Various Brain Regions in Female Zebra Finches

  • Stan Moaraf,
  • Rachel Heiblum,
  • Yulia Vistoropsky,
  • Monika Okuliarová,
  • Michal Zeman and
  • Anat Barnea

26 August 2020

Despite growing evidence that demonstrate adverse effects of artificial light at night (ALAN) on many species, relatively little is known regarding its effects on brain plasticity in birds. We recently showed that although ALAN increases cell prolife...

  • Article
  • Open Access
3 Citations
2,582 Views
10 Pages

6 February 2024

The role of chemical communication in the social relationships of birds is receiving growing attention, but our knowledge is still scarce compared to that of other taxa. Previous evidence suggests that chemical cues emitted by birds may carry informa...

  • Article
  • Open Access
4 Citations
3,147 Views
12 Pages

Effectivity of Two Cell Proliferation Markers in Brain of a Songbird Zebra Finch

  • Lubica Kubikova,
  • Justina Polomova,
  • Viktoria Mikulaskova and
  • Kristina Lukacova

25 October 2020

There are two most heavily used markers of cell proliferation, thymidine analogues 5-bromo-2′-deoxyuridine (BrdU) and 5-ethynyl-2′-deoxyuridine (EdU) that are incorporated into the DNA during its synthesis. In neurosciences, they are ofte...

  • Article
  • Open Access
2,140 Views
8 Pages

3 October 2023

Zebra finches are a model animal used in the study of audition. They are adept at recognizing zebra finch songs, and the neural pathway involved in song recognition is well studied. Here, this example is used to illustrate the estimation of mutual in...

  • Article
  • Open Access
13 Citations
6,186 Views
14 Pages

Karyotype Evolution and Genomic Organization of Repetitive DNAs in the Saffron Finch, Sicalis flaveola (Passeriformes, Aves)

  • Rafael Kretschmer,
  • Benilson Silva Rodrigues,
  • Suziane Alves Barcellos,
  • Alice Lemos Costa,
  • Marcelo de Bello Cioffi,
  • Analía del Valle Garnero,
  • Ricardo José Gunski,
  • Edivaldo Herculano Corrêa de Oliveira and
  • Darren K. Griffin

19 May 2021

The Saffron finch (Sicalis flaveola), a semi-domestic species, is tolerant of human proximity and nesting in roof spaces. Considering the importance of cytogenomic approaches in revealing different aspects of genomic organization and evolution, we pr...

  • Article
  • Open Access
13 Citations
8,057 Views
18 Pages

4 December 2021

When different introduced species across trophic levels (parasite, predator) invade island systems, they may pose significant threats to nesting birds. In this study, we measure nesting height and infer causes of offspring mortality in the critically...

  • Article
  • Open Access
5 Citations
4,110 Views
11 Pages

25 November 2021

Animals invest in costly vigilance to detect threats. Joining groups reduces these costs, which can be further reduced in mixed-species assemblages. In colour-polymorphic species, morphs often experience different predation pressure and vary in a var...

  • Article
  • Open Access
14 Citations
3,552 Views
17 Pages

Evidence That Artificial Light at Night Induces Structure-Specific Changes in Brain Plasticity in a Diurnal Bird

  • Stan Moaraf,
  • Rachel Heiblum,
  • Monika Okuliarová,
  • Abraham Hefetz,
  • Inon Scharf,
  • Michal Zeman and
  • Anat Barnea

21 July 2021

We recently reported that artificial light at night (ALAN), at ecologically relevant intensities (1.5, 5 lux), increases cell proliferation in the ventricular zone and recruitment of new neurons in several forebrain regions of female zebra finches (T...

  • Feature Paper
  • Article
  • Open Access
8 Citations
5,922 Views
10 Pages

Flight Initiation Distance in an Urban Bird: Influence of the Number of People, Gaze Orientation, and Bird Behavior

  • Natália Cardoso de Resende,
  • Camila Palhares Teixeira and
  • Cristiano Schetini de Azevedo

5 June 2024

The flight initiation distance (FID) measures the distance a bird flees from an approaching predator. Factors such as the frequency of predator approaches, the direction of predator gaze, variations in predator presence across different areas, and th...

  • Article
  • Open Access
5 Citations
3,067 Views
9 Pages

22 July 2022

Due to the biological uniqueness of the Galápagos Islands, ectoparasites of their avian fauna are relatively well-studied compared with other oceanic islands. However, in this study, quill mites (Acariformes: Prostigmata: Syringophilidae) were...

  • Communication
  • Open Access
5 Citations
3,798 Views
15 Pages

21 April 2021

To understand the social interactions among songbirds, extracting the timing, position, and acoustic properties of their vocalizations is essential. We propose a framework for automatic and fine-scale extraction of spatial-spectral-temporal patterns...

  • Article
  • Open Access
4 Citations
3,365 Views
14 Pages

22 December 2022

Vigilance is an important behaviour to monitor the environment from detecting predators to tracking conspecifics. However, little is known about how vigilance changes over time either without disturbance (vigilance decrement) or after a change occurr...

  • Article
  • Open Access
1 Citations
1,930 Views
21 Pages

12 November 2024

Among eukaryotes, there are many examples of partial genome elimination during ontogenesis. A striking example of this phenomenon is the loss of entire avian chromosomes during meiosis, called a germline-restricted chromosome (GRC). The GRC is absent...

  • Feature Paper
  • Article
  • Open Access
1,236 Views
12 Pages

24 June 2025

Real-time health assessment is crucial for diagnosing emerging threats to wildlife. Point-of-care instruments now allow detailed, affordable measurements of blood metabolites (e.g., glucose, triglycerides, ketones) in free-ranging animals. Ketones, h...

  • Article
  • Open Access
257 Views
15 Pages

28 December 2025

Animals scan their environment to detect threats. Such vigilance behaviour is costly, and animals adjust their vigilance to prevailing threats. Waterholes are dangerous places that attract predators, and require heightened vigilance. We investigated...

  • Article
  • Open Access
707 Views
16 Pages

Web-Based Photography Documents the Evening Grosbeak’s (Hesperiphona vespertina) Highly Diverse Diet

  • William M. Kirsch,
  • Caleb T. Centanni,
  • Matthew A. Young,
  • Jack Hobe,
  • Colton R. Veltkamp and
  • W. Douglas Robinson

4 December 2025

Community-sourced biodiversity imagery has expanded rapidly in the past decade, facilitating analyses of ecology on unprecedented spatial scales. Proliferation of these databases has also helped to reveal understudied or previously overlooked aspects...

  • Review
  • Open Access
3 Citations
3,190 Views
33 Pages

Recent Advances in Spatially Incoherent Coded Aperture Imaging Technologies

  • Vipin Tiwari,
  • Shivasubramanian Gopinath,
  • Tauno Kahro,
  • Francis Gracy Arockiaraj,
  • Agnes Pristy Ignatius Xavier,
  • Narmada Joshi,
  • Kaupo Kukli,
  • Aile Tamm,
  • Saulius Juodkazis and
  • Vijayakumar Anand
  • + 1 author

Coded aperture imaging (CAI) is a powerful imaging technology that has rapidly developed during the past decade. CAI technology and its integration with incoherent holography have led to the development of several cutting-edge imaging tools, devices,...

  • Article
  • Open Access
9 Citations
4,500 Views
10 Pages

13 April 2022

Anthropogenic noise and artificial light at night (ALAN) can disrupt the morning singing routines of urban birds, however, its influence on tropical species remains poorly explored. Here, I assessed the association between light and noise pollution w...

  • Feature Paper
  • Review
  • Open Access
126 Citations
17,966 Views
18 Pages

Incoherent Digital Holography: A Review

  • Jung-Ping Liu,
  • Tatsuki Tahara,
  • Yoshio Hayasaki and
  • Ting-Chung Poon

20 January 2018

Digital holography (DH) is a promising technique for modern three-dimensional (3D) imaging. Coherent holography records the complex amplitude of a 3D object holographically, giving speckle noise upon reconstruction and presenting a serious drawback i...

  • Article
  • Open Access
16 Citations
4,318 Views
11 Pages

Edge and Contrast Enhancement Using Spatially Incoherent Correlation Holography Techniques

  • Vijayakumar Anand,
  • Joseph Rosen,
  • Soon Hock Ng,
  • Tomas Katkus,
  • Denver P Linklater,
  • Elena P Ivanova and
  • Saulius Juodkazis

Image enhancement techniques (such as edge and contrast enhancement) are essential for many imaging applications. In incoherent holography techniques such as Fresnel incoherent correlation holography (FINCH), the light from an object is split into tw...

  • Article
  • Open Access
2 Citations
2,986 Views
17 Pages

Habitat Selection of Three Neotropical Grassland Birds Is Dependent on Vegetation Structure and Resources

  • Jo Peacock,
  • Ross Macleod,
  • G. Matt Davies,
  • Tjalle Boorsma and
  • Christopher M. Tonra

10 April 2024

Grassland birds are globally imperiled. Those of endemic Neotropical savannas may be particularly threatened as knowledge of the ecology of many species is lacking, restricting our ability to take decisive conservation action. During the dry (non-bre...

  • Proceeding Paper
  • Open Access
3 Citations
1,925 Views
8 Pages

6 March 2023

Optical imaging has been utilized in nature and technology for decades. Recently, new methods of optical imaging assisted by computational imaging techniques have been proposed and demonstrated. We describe several new methods of three-dimensional op...

  • Article
  • Open Access
3 Citations
2,716 Views
22 Pages

Classification of Metaplectic Fusion Categories

  • Eddy Ardonne,
  • Peter E. Finch and
  • Matthew Titsworth

5 November 2021

In this paper, we study a family of fusion and modular systems realizing fusion categories Grothendieck equivalent to the representation category for so(2p+1)2. These categories describe non-abelian anyons dubbed ‘metaplectic anyons’. We obtain expli...

  • Article
  • Open Access
10 Citations
4,533 Views
17 Pages

Sub-Acute Feeding Study of Saxitoxin to Mice Confirms the Effectiveness of Current Regulatory Limits for Paralytic Shellfish Toxins

  • Sarah C. Finch,
  • Nicola G. Webb,
  • Michael J. Boundy,
  • D. Tim Harwood,
  • John S. Munday,
  • Jan M. Sprosen,
  • Vanessa M. Cave,
  • Ric B. Broadhurst and
  • Jeane Nicolas

7 September 2021

Regulatory limits for shellfish toxins are required to protect human health. Often these limits are set using only acute toxicity data, which is significant, as in some communities, shellfish makes up a large proportion of their daily diet and can be...

  • Article
  • Open Access
17 Citations
5,025 Views
21 Pages

Maraviroc Prevents HCC Development by Suppressing Macrophages and the Liver Progenitor Cell Response in a Murine Chronic Liver Disease Model

  • Adam M. Passman,
  • Robyn P. Strauss,
  • Sarah B. McSpadden,
  • Megan Finch-Edmondson,
  • Neil Andrewartha,
  • Ken H. Woo,
  • Luke A. Diepeveen,
  • Weihao Zhao,
  • Joaquín Fernández-Irigoyen and
  • Laura Ochoa-Callejero
  • + 14 authors

30 September 2021

Maraviroc (MVC), a CCR5 antagonist, reduces liver fibrosis, injury and tumour burden in mice fed a hepatocarcinogenic diet, suggesting it has potential as a cancer therapeutic. We investigated the effect of MVC on liver progenitor cells (LPCs) and ma...

  • Article
  • Open Access
9 Citations
3,302 Views
22 Pages

Single-Shot ChAd3-MARV Vaccine in Modified Formulation Buffer Shows 100% Protection of NHPs

  • Courtney L. Finch,
  • Thomas H. King,
  • Kendra J. Alfson,
  • Katie A. Albanese,
  • Julianne N. P. Smith,
  • Paul Smock,
  • Jocelyn Jakubik,
  • Yenny Goez-Gazi,
  • Michal Gazi and
  • Rong Xu
  • + 9 authors

15 November 2022

Marburg virus (MARV) is a virus of high human consequence with a case fatality rate of 24–88%. The global health and national security risks posed by Marburg virus disease (MVD) underscore the compelling need for a prophylactic vaccine, but no...

  • Article
  • Open Access
2,020 Views
18 Pages

Toxicological Assessment of Pure Lolitrem B and Ryegrass Seed Infected with the AR37 Endophyte Using Mice

  • Sarah C. Finch,
  • Allan D. Hawkes,
  • Joan M. Fitzgerald,
  • Ric B. Broadhurst,
  • Maryann R. Staincliffe and
  • John S. Munday

28 October 2022

Fungal endophytes in perennial ryegrass are essential to New Zealand’s pastoral system due to anti-insect effects. However, endophytes also produce compounds which can be detrimental to animals. Furthermore, as these toxins have been detected i...

  • Article
  • Open Access
27 Citations
3,968 Views
17 Pages

Identification and Structure Elucidation of Epoxyjanthitrems from Lolium perenne Infected with the Endophytic Fungus Epichloë festucae var. lolii and Determination of the Tremorgenic and Anti-Insect Activity of Epoxyjanthitrem I

  • Sarah C. Finch,
  • Michèle R. Prinsep,
  • Alison J. Popay,
  • Alistair L. Wilkins,
  • Nicola G. Webb,
  • Sweta Bhattarai,
  • Joanne G. Jensen,
  • Allan D. Hawkes,
  • Jacob V. Babu and
  • Geoffrey A. Lane
  • + 1 author

17 August 2020

Epoxyjanthitrems I–IV (14) and epoxyjanthitriol (5) were isolated from seed of perennial ryegrass (Lolium perenne) infected with the endophytic fungus Epichloë festucae var. lolii. Although structures for epoxyjanthitrems I–IV...

  • Article
  • Open Access
6 Citations
4,008 Views
20 Pages

The study aimed to compare the effectiveness of a suite of implementation strategies of varying intensities on centre-based childcare service implementation of nutrition guideline recommendations at 12-month follow-up. A six-month three-arm parallel...

  • Article
  • Open Access
7 Citations
5,517 Views
20 Pages

A Model for the Production of Regulatory Grade Viral Hemorrhagic Fever Exposure Stocks: From Field Surveillance to Advanced Characterization of SFTSV

  • Unai Perez-Sautu,
  • Se Hun Gu,
  • Katie Caviness,
  • Dong Hyun Song,
  • Yu-Jin Kim,
  • Nicholas Di Paola,
  • Daesang Lee,
  • Terry A. Klein,
  • Joseph A. Chitty and
  • Seong Tae Jeong
  • + 19 authors

29 August 2020

Severe fever with thrombocytopenia syndrome virus (SFTSV) is an emerging human pathogen, endemic in areas of China, Japan, and the Korea (KOR). It is primarily transmitted through infected ticks and can cause a severe hemorrhagic fever disease with c...

  • Article
  • Open Access
4 Citations
3,966 Views
11 Pages

A Recipe for Success? A Nutrient Analysis of Recipes Promoted by Supermarkets

  • Jasmin Wademan,
  • Gael Myers,
  • Anne Finch,
  • Satvinder S. Dhaliwal,
  • Jane Scott and
  • Andrea Begley

Recipe use impacts eating habits, yet there is limited research investigating the nutritional quality of recipes. Supermarket recipe magazines command large readerships, with over 4 million readers for each of the two major Australian supermarket pub...

  • Review
  • Open Access
101 Citations
19,575 Views
31 Pages

The Role of Flies as Pollinators of Horticultural Crops: An Australian Case Study with Worldwide Relevance

  • David F Cook,
  • Sasha C Voss,
  • Jonathan T D Finch,
  • Romina C Rader,
  • James M Cook and
  • Cameron J Spurr

2 June 2020

Australian horticulture relies heavily on the introduced managed honey bee, Apis mellifera Linnaeus 1758 (Hymenoptera: Apidae), to pollinate crops. Given the risks associated with reliance upon a single species, it would be prudent to identify other...

  • Article
  • Open Access
22 Citations
5,040 Views
10 Pages

12 October 2020

1. Bats are important components of agricultural ecosystems. However, little is known about the extent to which bats use linear features when foraging and commuting in agricultural settings, when compared to the interior of fields. 2. As part of a la...

  • Article
  • Open Access
15 Citations
8,636 Views
14 Pages

Risk Assessment of Pectenotoxins in New Zealand Bivalve Molluscan Shellfish, 2009–2019

  • Michael J. Boundy,
  • D Tim Harwood,
  • Andreas Kiermeier,
  • Cath McLeod,
  • Jeane Nicolas and
  • Sarah Finch

6 December 2020

Pectenotoxins (PTXs) are produced by Dinophysis spp., along with okadaic acid, dinophysistoxin 1, and dinophysistoxin 2. The okadaic acid group toxins cause diarrhetic shellfish poisoning (DSP), so are therefore regulated. New Zealand currently inclu...

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