Search Results (56)

The manuscript explores the valorization of forest logging residues, collected during forest management operations between summer 2023 and spring 2025 in mixed deciduous and coniferous forests, as a raw material for producing valuable bioactive products. These products offer a sustainable alternative to synthetic pesticides and fertilizers. Seven batches of biomass, comprising understory trees and branches from deciduous (mainly aspen, birch, and grey alder) and coniferous (mainly Scots pine) species, were collected during different seasons, crushed, and extracted using an ethanol–water solution. The yield of hydrophilic extracts containing proanthocyanidins (PACs) ranged from 18 to 25% per dry biomass. The highest PACs concentration (42% of extract dry mass) was found in small branches with a high bark content. The extracts and PACs at concentrations of 6.25‒12.50 mg mL⁻¹ showed fungicidal activity against several pathogenic fungi, including Botrytis cinerea Pers., Mycosphaerella sp. Johanson, Heterobasidion annosum (Fr.) Bref., and Heterobasidion parviporum Niemelä & Korhonen. Residual biomass after extraction, enriched with sea buckthorn berry pomace and a siliceous complex, was characterized and evaluated for its impact on the growth of Scots pine seedlings and selected agricultural crops. Results from forest and agricultural field trials in 2023–2025 confirmed a positive effect of the fertilizer on crop yield and quality at a low application rate (40 kg ha⁻¹ per crop). Fertilizer increased the yield of radish, dill, potatoes, and wheat by up to 44% (highest for potatoes and dill) compared to the reference, confirming its agronomic value. Full article

Heterobasidion root rot fungi represent a major threat to conifer forest stands, and virocontrol (biocontrol) has been proposed as an alternative strategy of disease management in recent years. Here, we investigated the occurrence of RNA viruses and viroid-like genomes in Heterobasidion annosum sensu lato in near-natural forests of Bosnia and Herzegovina (Dinaric Alps), a region previously unexplored in this regard. Seventeen H. annosum s.l. isolates were screened for virus presence by RNA Sequencing and bioinformatic analyses. In total, 32 distinct mycoviruses were discovered in the datasets, 26 of which were previously unknown. The detected viruses represent two dsRNA (Partitiviridae and Curvulaviridae), six linear ssRNA (Mitoviridae, Narnaviridae, Botourmiaviridae, Virgaviridae, Benyviridae, and Deltaflexiviridae) and three circular ssRNA (Dumbiviridae, Quambiviridae, and Trimbiviridae) virus families. In addition to the known circular ambiviruses with their hammerhead (HHRz) and hairpin (HPRz) ribozymes, two other smaller non-coding circular RNAs of ca. 910 bp each were identified encoding HHRz and deltavirus (DVRz) ribozymes in both polarities of their genomes. This study documents the first report of a putative viroid-like RNA agent in Heterobasidion, along with beny-like and deltaflexivirus-like viruses in Heterobasidion abietinum, and expands the known virosphere of Heterobasidion species in Southeastern European forests. Full article

Root and butt rot, caused by Heterobasidion species, poses a significant threat to coniferous forests in the Northern Hemisphere. Innovative and effective strategies are crucial to enhance the control of this disease. This study aimed at identifying a Streptomyces strain, FY4, and evaluating its biocontrol potential against H. annosum and H. parviporum. Strain FY4 was identified as Streptomyces blastmyceticus based on morphological, physiological, and biochemical characteristics, supported by a multigene phylogenetic analysis using the 16S rRNA, atpD, rpoB, and trpB genes. In vitro dual-culture experiments showed that S. blastmyceticus exhibited antagonistic activity against both H. annosum and H. parviporum, with an inhibition zone diameter exceeding 15 mm. Moreover, the fermentation broth of S. blastmyceticus FY4 displayed significant inhibitory effects on the mycelial growth and spore germination of both Heterobasidion species. At a 10% concentration, the fermentation broth inhibited the mycelial growth by over 90% and reduced the spore germination rate by more than 60%. Additionally, the fermentation broth exhibited significant inhibitory effects on the mycelial growth of four common pathogenic fungi—Phytophthora cinnamomi, P. sojae, Rhizoctonia solani, and Verticillium dahlia, with an inhibition rate over 50%. These findings suggest that S. blastmyceticus FY4 produces antifungal substances capable of effectively suppressing infection of Heterobasidion species in conifers. Consequently, strain FY4 holds great promise as a biological control agent for managing root and butt rot caused by these pathogens, as well as potential for controlling other fungal diseases. Full article

Heterobasidion, a significant forest pathogen affecting coniferous forests in the Northern Hemisphere, can infect 27 species of coniferous trees, leading to widespread forest mortality. It has already caused considerable damage to both natural and plantation forests in Europe. As essential components of the global ecosystem, forests are increasingly affected by ongoing environmental changes. The ability to accurately predict and effectively respond to pathogen outbreaks across different habitats is becoming increasingly critical. This study employs an optimized MaxEnt model in conjunction with six Global Climate Models (GCMs) to simulate and predict the potentially suitable distributions and changes of three Heterobasidion species in Europe (Heterobasidion abietinum, Heterobasidion annosum sensu stricto, Heterobasidion parviporum) under current conditions and four future climate scenarios (SSP126, SSP245, SSP370, and SSP585) for the period 2081–2100. The objective of this analysis is to assess the potential effects of climate change on the distribution of Heterobasidion species. The results indicate that the distributions of the three Heterobasidion species are influenced by factors such as temperature and precipitation. By 2081–2100, under most climate scenarios, except for the SSP585 scenario, the distribution areas of the three Heterobasidion species show an expansion trend. Notably, Heterobasidion abietinum showed the most significant expansion of its suitable habitat, while the expansion of low-suitability areas for Heterobasidion parviporum and Heterobasidion annosum sensu stricto was more pronounced. Heterobasidion abietinum is projected to shift southward due to factors such as precipitation, while Heterobasidion parviporum and Heterobasidion annosum sensu stricto are expected to migrate northward, influenced by factors such as temperature and host tree species. Full article

Transcriptomes from stem-inoculated Scots pine saplings were analyzed to identify unique and enriched H. annosum transcripts in the early stages of infection. Comparing different time points since inoculation identified 131 differentially expressed H. annosum genes with p-values of ≤0.01. Our research supports the results of previous studies on the Norway spruce–Heterobasidion annosum s.l. pathosystem, indicating the role of carbohydrate and lignin degradation genes in pathogenesis at different time points post-inoculation and the role of lipid metabolism genes (including but not limited to the delta-12 fatty acid desaturase gene previously reported to be an important factor). The results of this study indicate that the malic enzyme could be a potential gene of interest in the context of H. annosum virulence. During this study, difficulties related to incomplete reference material of the host plant species and a low proportion of H. annosum transcripts in the RNA pool were encountered. In addition, H. annosum transcripts are currently not well annotated. Improvements in sequencing technologies (including sequencing depth) or bioinformatics focusing on small subpopulations of RNA would be welcome. Full article

Pine stands affected by root and butt rot (Heterobasidion annosum s.l.) contain pines (Pinus sylvestris L.) that can survive for a long time without showing external symptoms of the disease (‘conditionally resistant’ refers to trees that survive without symptoms despite infection). The establishment of stands from the seeds of such trees can significantly increase the effectiveness of artificial afforestation. Since the growth and development of pine trees is determined to a certain extent by the number of cotyledons after seed germination, this article examines this trait in the progeny of trees that are potentially resistant and those that have already been attacked by root pathogens. The number of cotyledons and the resilience of trees is fascinating and not generally known. Presumably, the number of cotyledons can be linked to disease resistance based on increased vigour. Biologically, a larger area for carbon assimilation leads to better photosynthetic efficiency and the production of more assimilates (sugars) necessary to trigger defence processes in the event of infection. From an ecological point of view, this can give tree populations in areas potentially threatened by root system diseases a chance of survival. The aim of this study was to analyze the potential of using the number of cotyledons and other seedling characteristics to predict the resistance of trees to root and butt rot disease. The collected data show that the seedlings from the group of diseased trees exhibited lower growth rates and vigour. However, the seedlings from the group of potentially resistant trees are similar to the control, meaning the trees that show no disease symptoms because they have not come into contact with the pathogen. Our observations suggest that monitoring germinating cotyledons could serve as an early diagnostic tool to identify disease-resistant pines, although further research is needed. Full article

The family Bondarzewiaceae is an important and diverse group of macrofungi associated with wood as white rotting fungi, and some species are forest tree pathogens. Currently, there are nine genera and approximately 89 species in the family, distributed in tropical, subtropical, and temperate climates. To address the phylogenetic relationships among the genera, a combined ITS-28S dataset was subjected to maximum likelihood (ML), Bayesian inference (BI), and time divergence analyses using the BEAST package. Both ML and BI analyses revealed two major clades, where one major clade consisted of Amylosporus, Stecchericium, and Wrightoporia austrosinensisa. The second major clade is composed of Bondarzewia, Heterobasidion, Gloiodon, Laurilia, Lauriliella, and Wrightoporia, indicating that these genera are phylogenetically similar. Wrightoporia austrosinensisa recovered outside of Wrightoporia, indicating that this species is phylogenetically different from the rest of the species of the genus. Similarly, time divergence analyses suggest that Bondarzewiaceae diversified around 114 million years ago (mya), possibly during the Early Cretaceous Epoch. The genus Amylosporus is well resolved within the family, with an estimated stem age of divergent around 62 mya, possibly during the Eocene Epoch. Further, the species of the genus are recovered in two sister clades. One sister clade consists of species with pileate basidiomata and generative hyphae with clamp connections, corresponding to the proposed section Amylosporus sect. Amylosporus. The other consists of species having resupinate basidiomata and generative hyphae without clamps, which is treated here as Amylosporus sect. Resupinati. We provided the key taxonomic characters, known distribution, number of species, and stem age of diversification of each section. Furthermore, we also described a new species, Amylosporus wadinaheezicus, from Oman, based on morphological characters of basidiomata and multigene sequence data of ITS, 28S, and Tef1-α. With pileate basidiomata and phylogenetic placement, the new species is classified under the proposed A. sect. Amylosporus. An identification key to the known species of Amylosporus is presented. Ecology and distribution of species of the genera in the family are discussed. Full article

Aegerolysins are a family of proteins that recognize and bind to specific membrane lipids or lipid domains; hence they can be used as membrane lipid sensors. Although aegerolysins are distributed throughout the tree of life, the most studied are those produced by the fungal genus Pleurotus. Most of the aegerolysin-producing mushrooms code also for proteins containing the membrane attack complex/perforin (MACPF)-domain. The combinations of lipid-sensing aegerolysins and MACPF protein partners are lytic for cells harboring the aegerolysin membrane lipid receptor and can be used as ecologically friendly bioinsecticides. In this work, we have recombinantly expressed four novel aegerolysin/MACPF protein pairs from the mushrooms Heterobasidion irregulare, Trametes versicolor, Mucidula mucida, and Lepista nuda, and compared these proteins with the already studied aegerolysin/MACPF protein pair ostreolysin A6–pleurotolysin B from P. ostreatus. We show here that most of these new mushroom proteins can form active aegerolysin/MACPF cytolytic complexes upon aegerolysin binding to membrane sphingolipids. We further disclose that these mushroom aegerolysins bind also to selected glycerophospholipids, in particular to phosphatidic acid and cardiolipin; however, these interactions with glycerophospholipids do not lead to pore formation. Our results indicate that selected mushroom aegerolysins show potential as new molecular biosensors for labelling phosphatidic acid. Full article

In 2019, the bark beetle Ips amitinus (native to central Europe) was identified in south-western Siberia at a distance exceeding 2500 km east of its previously known easternmost location in the European part of Russia. In Siberia, its invasive populations are characterised by high abundance and harmfulness. Here, I. amitinus accomplishes primary attacks on standing vital trees of Pinus sibirica with a lethal outcome. This invasion has already resulted in massive dieback in stands of pine over a large geographic territory. By, 2021, the invaded area was estimated to cover at least 31,200 km². The objectives of this study were to investigate fungi associated with/vectored by I. amitinus in its invasive area in south-western Siberia and wood decay fungi that cause root and butt rots to P. sibirica. This led to the following conclusions: (i) DNA analysis of sixty adult beetles of Ips amitinus collected from P. sibirica in south-west Siberia revealed the presence of 143 fungal taxa; (ii) species richness was significantly higher in beetles collected from dead branches than from (more recently infested) dying branches; (iii) fungal communities were >90% dominated by yeasts, among which the most common were Nakazawaea holstii, Kuraishia molischiana, and N. ambrosiae; (iv) entomopathogenic Beauveria bassiana s.l. was the most common fungus isolated from dead/mycosed beetles of I. amitinus, followed by Lophium arboricola and four Ophiostoma spp.; and (v) Heterobasidion parviporum was the most common decay fungus detected, which was causing heart rot in stems of P. sibirica. Full article

This study investigates the mycelial biomass production and chitosan extraction potential of various Basidiomycota strains, including Heterobasidion annosum, Phanerochaete chrysosporium, Pleurotus ostreatus, Trametes versicolor, and Lentinus lepideus. Both submerged fermentation (SF) and solid-state fermentation (SSF) methods were employed. The chitosan yield in basidiocarps of Pleurotus ostreatus, Agaricus bisporus, and Ganoderma applanatum was also evaluated as a reference material. The chitosan extracted from fungal cells was characterized using elemental analyses and FTIR spectroscopy. Among the cultivated strains, P. chrysosporium exhibited the highest mycelial biomass concentration in SF (1.03 g 100 mL^–1) after 14 days, while T. versicolor achieved the highest biomass concentration in SSF (3.65 g 100 mL^–1). The highest chitosan yield was obtained from the mycelium of P. chrysosporium (0.38%) and T. versicolor (0.37%) in shaken SF. Additionally, commercially cultivated A. bisporus demonstrated the highest chitosan yield in fungal fruiting bodies (1.7%). The extracted chitosan holds potential as a functional biopolymer additive for eco-friendly materials, serving as an alternative to synthetic wet and dry strength agents in packaging materials. Full article

Heterobasidion spp. are among the most destructive root rot pathogens, causing severe economic losses to conifer forestry. High infection frequency has been observed in Scots pine stands growing on dry sandy soils with low organic matter or former agricultural soils. In this study, we investigated the incidence of Heterobasidion spp. infection in Scots pine forests established on low-risk sites where the trees looked healthy and unlikely to be infected. In total, 135 healthy-looking pine trees from nine different stands were examined for Heterobasidion spp. presence. Heterobasidion spp. was detected in six stands and infection frequency was 13%–33%. There was a significant correlation between site index and infection frequency, which was higher in pine stands established on more fertile soils. There was no correlation between disease incidence and defoliation level, diameter of tree at breast height, root diameter, tree volume, or stand age. Overall, our results showed that, regardless of the soil type, Scots pine can be intensively infected by Heterobasidion pathogens while showing no outward signs. Therefore, the risk of Heterobasidion disease should be taken into consideration in management of pine forests growing on both low- and high-risk sites for more productive and sustainable forests. Full article

Heterobasidion annosum (Fr.) Bref. sensu lato (s.l.) is a dangerous forest pathogen causing root and butt rot disease in most conifers of the northern hemisphere. This pathogen is most widespread in the forests of Europe and North America. The economic impact on forestry related to tree mortality, reduction in timber yield, and wood rot is calculated in millions of dollars and euros. The genus Heterobasidion (Basidiomycota; Russulales) has been relatively recently separated into three genetically distinct groups (H. annosum, H. insulare and H. araucariae) comprising a total of 12 species and one newly described hybrid taxon. These species are the best studied in terms of the ecology, the physiology of control methods, and the tree’s resistance to the pathogen. The article gives an overview of the symptoms and the etiology of the disease and provides information on ways to recognize the disease and limit the economic damage. Full article

Somatic embryogenesis (SE) is considered the most effective method for vegetative propagation of Norway spruce (Picea abies L. Karst). When the aim is commercial production, the process needs scaling up. This includes many initiations to increase the number of available genotypes in the cryo-bank. Numerous genotypes are needed to maintain genetic diversity in reforestation and, at the same time, are a prerequisite for the efficient improvement of breeding traits. Norway spruce is also highly susceptible to Heterobasidion root rot. We analysed the data from the SE initiations of Norway spruce from six different years, including a total of 126 families and almost 13,000 initiations, and used several genetic (including allele PaLAR3B improving Heterobasidion resistance), environmental, and operational variables to explain the initiation success and the number of cryopreserved embryogenic tissue (ET). Overall, the cone collection date was the best and most comprehensive single variable for predicting the initiation success and the number of cryopreserved ET in the logistic regression models. PaLAR3B allele did not interfere with SE initiation or the cryopreservation. In the optimal scenario, according to the current data, Norway spruce cones would be collected in southern Finland during the first two weeks of July (in approximately 800 d.d. accumulation) from the seed orchard or greenhouse and delivered quickly to the laboratory, and the cones would be cold-stored for five days or less before initiations on mLM media. Lower initiation frequencies in some families can be compensated by increasing the number of explants—however, taking operational limitations into account. Full article

Treatment of conifer stumps with a control agent effectively prevents Heterobasidion spore infections in summer cuttings and protects the residual stand and the next tree generation from damage caused by Heterobasidion root rot. Thus far, stump treatment experiments have been carried out in mineral soils, and no information is available on the efficacy of stump treatment agents in boreal peatland conditions. In the present study, biological and chemical control agents (Phlebiopsis gigantea and urea, respectively) were tested in Scots pine and Norway spruce stands subjected to thinning, cap cutting, and clearcutting on drained peatland in Central Finland. The control efficacy of urea was high in both spruce and pine stumps (on average 99.5 and 85.3%, respectively), while the efficacy of P. gigantea was highly variable on both tree species and ranged from full protection down to negative control effect, i.e., there were more Heterobasidion infections on the treated than untreated half of the stumps. The moisture content of the stump wood or the thickness of the peat layer did not affect the control efficacy of either control agent. These results emphasize a need for further studies to determine the reasons for the unsteadiness of the biological control in peatland conditions. Full article

Fungal extracts possess potential anticancer activity against many malignant neoplastic diseases. In this research, we focused on the evaluation of Heterobasidion annosum (HA) extract in colorectal cancer in an in vivo model. The mice with implanted DLD-1 human cancer cells were given HA extract, the referential drug—5-fluorouracil (5FU), or were treated with its combination. Thereafter, tumor volume was measured and apoptotic proteins such as caspase-8, caspase-3, p53, Bcl-2, and survivin were analyzed in mice serum with an ELISA assay. The Ki-67 protein was assessed in tumor cells by immunohistochemical examination. The biggest volumes of tumors were confirmed in the DLD-1 group, while the lowest were observed in the population treated with 5FU and/or HA extract. The assessment of apoptosis showed increased concentrations of caspase 8 and p53 protein after the combined administration of 5FU and HA extract. The levels of survivin and Bcl-2 were decreased in all tested groups compared to the DLD-1 group. Moreover, we observed a positive reaction for Ki-67 protein in all tested groups. Our findings confirm the apoptotic effect of extract given alone or with 5FU. The obtained results are innovative and provide a basis for further research concerning the antitumor activity of the HA extract, especially in the range of its interaction with an anticancer chemotherapeutic agent. Full article