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Search Results (1,789)

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Keywords = antioxidant secondary metabolites

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23 pages, 3088 KB  
Article
PvPR10-3 Expression Confers Salt Stress Tolerance in Arabidopsis and Interferes with Jasmonic Acid and ABA Signaling
by Kaouthar Feki, Hanen Kamoun, Amal Ben Romdhane, Sana Tounsi, Wissal Harrabi, Sirine Salhi, Haythem Mhadhbi, Maurizio Trovato and Faiçal Brini
Plants 2025, 14(19), 3092; https://doi.org/10.3390/plants14193092 - 7 Oct 2025
Viewed by 380
Abstract
Salt stress is a major abiotic factor limiting crop productivity worldwide, as it disrupts plant growth, metabolism, and survival. In this study, we report that the genes PvPR10-2 and PvPR10-3 were significantly up-regulated in bean leaves and stems in response to combined salt [...] Read more.
Salt stress is a major abiotic factor limiting crop productivity worldwide, as it disrupts plant growth, metabolism, and survival. In this study, we report that the genes PvPR10-2 and PvPR10-3 were significantly up-regulated in bean leaves and stems in response to combined salt and jasmonic acid (NaCl–JA) treatment. Foliar application of JA with salt induced physiological alterations, including stem growth inhibition, H2O2 accumulation, and activation of antioxidant enzymes. To investigate the role of PvPR10-3 in response to salt and phytohormones, we introduced this gene into Arabidopsis and found that its heterologous expression conferred salt tolerance to the transgenic lines. Interestingly, exogenous JA contributed to salt tolerance by reducing H2O2 levels, inducing ROS-scavenging enzymes, and promoting the accumulation of phenolic compounds and ABA. Furthermore, gene expression analysis of the transgenic lines revealed that PvPR10-3 expression under NaCl–JA stress is associated with the induction of JA-related genes like MYC2, JAZ2, JAZ11, and JAZ12, as well as SA-responsive genes, like ALD1 and TGA2, and two ABA-independent components DREB2A and ERD1, suggesting potential coordination between JA, ABA, and SA signaling in salt stress response. Additionally, key flowering regulators (FT, GI) were upregulated in transgenic lines under NaCl–JA treatment, suggesting a previously unexplored link between salt tolerance pathways and the regulation of flowering time. Taken together, our findings suggest a role of PvPR10-3 in enhancing salt stress tolerance and the involvement of exogenous JA in tolerance potentially by modulating ROS balance, hormone-associated gene expression, and protective secondary metabolites. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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21 pages, 679 KB  
Article
Insight into Cytotoxic Potential of Erica spiculifolia Salisb (Balkan Heath)
by Reneta Gevrenova, Rositsa Mihaylova, Nikolay Bebrivenski, Georgi Momekov and Dimitrina Zheleva-Dimitrova
Plants 2025, 14(19), 3063; https://doi.org/10.3390/plants14193063 - 3 Oct 2025
Viewed by 330
Abstract
Erica spiculifolia Salisb. (Balkan heath) is an evergreen shrub growing in the mountain shrublands of Eastern Europe. E. spiculifolia was used as a diuretic, anti-inflammatory, and antioxidant herbal remedy. The present study aims to conduct an evaluation of the phytochemical composition and antitumor [...] Read more.
Erica spiculifolia Salisb. (Balkan heath) is an evergreen shrub growing in the mountain shrublands of Eastern Europe. E. spiculifolia was used as a diuretic, anti-inflammatory, and antioxidant herbal remedy. The present study aims to conduct an evaluation of the phytochemical composition and antitumor activity of the methanol–aqueous extract from E. spiculifolia aerial parts to explore its potential in cancer treatment. Overall, a total of 54 secondary metabolites, including 28 hydroxybenzoic, hydroxycinnamic acids, and phenolic glycosides, and 10 triterpene acids, together with 17 flavonoids, were identified or annotated in the assayed E. spiculifolia extract using liquid chromatography-high-resolution mass spectrometry. The cytotoxic activity of the extract, alongside gallic, protocatechuic, and oleanolic acids as its constituents, was screened against a panel of malignant human cell lines of different origin (LAMA-84, HL-60, MDA-MB-231, MCF-7, and CASKI). The most prominent antiproliferative effect of the studied extract (with IC50 16.6 μg/mL), matched with the highest tumor selectivity (SI > 120), was observed in the LAMA-84 myeloid cells. These findings were further supported by gallic and oleanolic acid (IC50 6.2 and 1.7 μg/mL, respectively), accounting for a more distinct cytotoxicity. The strongest selective antineoplastic activity was achieved towards the triple-negative breast carcinoma cell line MDA-MB-231, with an IC50 of 32.5 μg/mL. This study provided compelling evidence for a wide spectrum of E. spiculifolia antitumor activity, indicating its potential as a natural alternative for future therapeutic applications. Full article
(This article belongs to the Special Issue Phytochemical Profiling and Bioactive Potential of Plants)
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20 pages, 7431 KB  
Article
Secretory Structures and Essential Oil Composition in Santolina chamaecyparissus L. Cultivated in Northern Italy
by Claudia Giuliani, Fabrizia Milani, Sara Falsini, Alberto Spada, Piero Bruschi, Alessio Papini, Laura Santagostini, Martina Bottoni and Gelsomina Fico
Horticulturae 2025, 11(10), 1184; https://doi.org/10.3390/horticulturae11101184 - 2 Oct 2025
Viewed by 171
Abstract
Santolina chamaecyparissus L. (Asteraceae), cultivated at the Ghirardi Botanic Garden (Toscolano Maderno, Brescia, Northern Italy) of the University of Milan, was investigated adopting a multidisciplinary research approach: micromorphological and histochemical, with special attention on the secretory structures producing secondary metabolites; phytochemical, with the [...] Read more.
Santolina chamaecyparissus L. (Asteraceae), cultivated at the Ghirardi Botanic Garden (Toscolano Maderno, Brescia, Northern Italy) of the University of Milan, was investigated adopting a multidisciplinary research approach: micromorphological and histochemical, with special attention on the secretory structures producing secondary metabolites; phytochemical, with the analysis of the essential oil (EO) composition from the air-dried, flowered aerial parts gathered once per year across two consecutive years (2021 and 2022); bio-ecological, focusing, based on literature data, on the biological activity and ecology of the main EO compounds; didactic–educational, with the ex novo realization of an interpretative apparatus at the study site. Two distinct types of secretory structures were described: biseriate glandular trichomes and secretory ducts, both producing an oleoresin rich in flavonoids. Phytochemical analysis revealed stable EO profiles across the two years with regards to the total number of compounds (39 vs. 40), the main chemical classes (oxygenated monoterpenes (72.67% vs. 78.61%) and monoterpenes hydrocarbons (15.06% vs. 10.48%) and the key single components (artemisia ketone, 52.74% vs. 55.67%; camphor, 13.00% vs. 16.18%). The literature data on the bio-ecology of the main compounds allowed us to confirm antimicrobial, antioxidant, and anti-inflammatory properties. Concerning the dissemination actions, the outcomes of this multidisciplinary work were integrated into a new interpretive apparatus for S. chamaecyparissus at the Ghirardi Botanic Garden. The research results enhance our understanding of this species, supporting its potential EO application in medicine and agriculture. Full article
(This article belongs to the Section Medicinals, Herbs, and Specialty Crops)
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22 pages, 1386 KB  
Article
Pharmacokinetic Profile of Extracts from the Chayote (Sechium edule) H387 07 Hybrid and Phytochemical Characterization of Its Segregant H387 M16 for Potential Therapeutic Applications
by Eugenia Elisa Delgado-Tiburcio, Ramón Marcos Soto-Hernández, Itzen Aguiñiga-Sánchez, Jorge Cadena-Iñiguez, Lucero del Mar Ruiz-Posadas, Cecilia B. Peña-Valdivia and Héctor Gómez-Yáñez
Molecules 2025, 30(19), 3948; https://doi.org/10.3390/molecules30193948 - 1 Oct 2025
Viewed by 375
Abstract
The hybrid Sechium edule H387 07, commonly known as chayote, has shown potential as an antiproliferative, cytotoxic, and pro-apoptotic agent in the murine leukemia cell lines P388 (macrophagic) and J774 (monocytic) and in the myelomonocytic leukemia cell line WEHI-3. However, despite these reported [...] Read more.
The hybrid Sechium edule H387 07, commonly known as chayote, has shown potential as an antiproliferative, cytotoxic, and pro-apoptotic agent in the murine leukemia cell lines P388 (macrophagic) and J774 (monocytic) and in the myelomonocytic leukemia cell line WEHI-3. However, despite these reported bioactivities, its pharmacokinetic profile remains largely unexplored. Understanding the absorption, distribution, and elimination of this hybrid is critical for addressing unmet therapeutic needs and for advancing the development of natural product-based therapies. These effects are attributed to the presence of phenols, flavonoids, and cucurbitacins in its organic extracts. In this study, the pharmacokinetic parameters of secondary metabolites from methanolic extracts of Sechium H387 07 were evaluated after oral administration in mice, while its segregant H387 M16 was subjected to complementary phytochemical characterization. Methanolic extracts of Sechium edule H387 07 were orally administered to mice at doses of 8, 125, and 250 mg/kg, and plasma, liver, and urine samples were collected at 1, 6, 24, and 48 h post-treatment. High-performance liquid chromatography (HPLC) identified polyphenols and cucurbitacins, notably cucurbitacin B (CuB) and cucurbitacin IIA (CuIIA), in the biological samples, and pharmacokinetic variables such as the maximum plasma concentration (Cmax), time to reach maximum concentration (Tmax), half-life (T1/2), and volume of distribution (Vd) were determined. For instance, CuB exhibited a Cmax of 37.56 µg/mL at 1 h post-dose after oral administration of 125 mg/kg, confirming its rapid absorption and systemic distribution. Notably, the presence of CuIIA in plasma was documented for the first time, along with the pharmacokinetic profiles of apigenin, phloretin, CuB, CuE, and CuI. In parallel, the segregant H387 M16 was characterized via colorimetric assays, thin-layer chromatography (TLC), HPLC, and antioxidant activity tests, which revealed high levels of flavonoids, phenols, and cucurbitacins, with an antioxidant activity of approximately 75% at the highest tested dose (1 mg/mL), supporting its suitability for future bioassays. Overall, these findings not only provide novel pharmacokinetic data for key metabolites of the H387 07 hybrid but also establish the phytochemical and antioxidant profile of its segregant H387 M16. This dual characterization strengthens the evidence of the therapeutic potential of Sechium genotypes and provides a valuable foundation for future studies aiming to develop standardized protocols and explore translational applications in drug development and natural product-based therapies. Full article
(This article belongs to the Section Natural Products Chemistry)
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16 pages, 2937 KB  
Article
Assessment of Antioxidant, Antiproliferative and Proapoptotic Potential of Aqueous Extracts of Chroococcus sp. R-10
by Inna Sulikovska, Tanya Toshkova-Yotova, Elina Tsvetanova, Vera Djeliova, Vesela Lozanova, Anelia Vasileva, Ivaylo Ivanov, Reneta Toshkova and Ani Georgieva
Appl. Sci. 2025, 15(19), 10628; https://doi.org/10.3390/app151910628 - 1 Oct 2025
Viewed by 250
Abstract
The rising incidence of cancer and the limitations of current therapeutic strategies underscore the urgent need to identify novel bioactive compounds for antitumor drug development. Cyanobacteria are widespread Gram-negative, photoautotrophic prokaryotes that have been recognized as an important source of biologically active secondary [...] Read more.
The rising incidence of cancer and the limitations of current therapeutic strategies underscore the urgent need to identify novel bioactive compounds for antitumor drug development. Cyanobacteria are widespread Gram-negative, photoautotrophic prokaryotes that have been recognized as an important source of biologically active secondary metabolites with vast potential for application in the fields of pharmaceutics. The aim of the present study was to analyze the phytochemical composition, antioxidant, and antitumor activities of low-temperature (LT) and high-temperature (HT) aqueous extracts of the cyanobacterium Chroococcus sp. R-10. Extracts were prepared and analyzed for phytochemical composition using UPLC-DAD, and antioxidant activity was tested via multiple assays. Antiproliferative effects were evaluated on human tumor cell lines, and the effects on cell cycle progression studied using flow cytometry. Fluorescence microscopy was employed to examine extract-induced cytomorphological changes in the treated cancer cells. UPLC-DAD analyses showed very similar chromatographic profiles of the extracts and identified glycogen as their main constituent. Both extracts displayed concentration-dependent antioxidant activity, with notable radical scavenging and ferric-reducing capacity. LT extract demonstrated higher phenolic content and antioxidant capacity. Both extracts reduced cell viability, particularly in MCF-7 and MDA-MB-231 breast carcinoma cell lines. Flow cytometry and fluorescent microscopy analyses revealed that the suppressed proliferative activity of the cancer cells was associated with a retardation of cell cycle progression and apoptosis induction. This study identifies Chroococcus sp. R-10 as a promising source of phytochemical compounds with pharmaceutical relevance and provides a rationale for further investigations to identify the primary bioactive constituents and elucidate their mechanisms of anticancer action. Full article
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17 pages, 1639 KB  
Article
Obtaining Nutraceutical Compounds from Agroindustrial Waste by Biotransformation with Pleurotus djamor
by Byanka A. Cruz-Moreno, Benito Parra-Pacheco, Linda Gilary Acosta-Lizárraga, Juan C. Silva-Jarquín, Juan Fernando García-Trejo, Humberto Aguirre-Becerra and Ana A. Feregrino-Pérez
Recycling 2025, 10(5), 185; https://doi.org/10.3390/recycling10050185 - 28 Sep 2025
Viewed by 219
Abstract
This study explores the production of nutritious edible mushrooms from mixtures of agave bagasse, an abundant agroindustrial byproduct, through the biotechnological application of solid-state fermentation using the edible mushroom Pleurotus djamor. The ability of the fungus to biotransform different mixtures of agave [...] Read more.
This study explores the production of nutritious edible mushrooms from mixtures of agave bagasse, an abundant agroindustrial byproduct, through the biotechnological application of solid-state fermentation using the edible mushroom Pleurotus djamor. The ability of the fungus to biotransform different mixtures of agave bagasse and corn stover into secondary metabolites of nutraceutical interest, such as polyphenols, organic acids, and bioactive polysaccharides, was evaluated. Biological efficiency (BE), morphological change, texture, and antioxidant capacity were also assessed, correlating the results with the impact of substrates and fungal developmental stages. The color, size, and margin of P. djamor basidiomas were observed to vary among treatments; BE progressively decreased from T0 (106.5%) to T4 (33.16%). Treatments with higher amounts of agave bagasse (T4) generated firmer fungi, with a fracture toughness of 7.06 ± 3.06 newtons. During fungal development, phenols, flavonoids, and tannins fluctuated. Treatment T0 showed the highest concentration of phenols (5.41 ± 0.92 mg GAE g−1). Treatment T4 stood out for its high antioxidant capacity (DPPH) (61.83 ± 12.16% inhibition). Finally, 17 non-phenolic secondary metabolites were found: L-valine, L-leucine, L-isoleucine, L, D-phenylalanine, L-proline, alanine, L-asparagine, serine, glutamic acid, linoleic acid, palmitic acid, butanoic acid, propanoic acid, pyrimidine, succinic acid, hexanedioic acid, and phosphoric acid. In conclusion, P. djamor can biotransform agroindustrial waste into edible fungi containing nutraceutical compounds. Full article
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13 pages, 13750 KB  
Article
Preliminary Insights into the Non-Volatile Constituents of Commiphora ornifolia (Balf.f.) J.B.Gillett Oleogum Resin from Socotra Island
by Martina Bortolami, Dario La Montagna, Chiara Toniolo, Fabio Sciubba, Adriano Patriarca, Tiziana Moretti, Ilaria Serafini, Francesco Mura, Emma Cocco, Petr Maděra, Kay Van Damme, Stefania Garzoli, Luca Santi, Fabio Attorre and Daniela De Vita
Plants 2025, 14(19), 2999; https://doi.org/10.3390/plants14192999 - 28 Sep 2025
Viewed by 238
Abstract
Natural resins are complex mixtures of secondary metabolites produced by many plants in response to stress or injury and have long been used for their antimicrobial, anti-inflammatory, and antioxidant properties. Among resin-producing genera, Commiphora Jacq. (Burseraceae) stands out for the traditional and medicinal [...] Read more.
Natural resins are complex mixtures of secondary metabolites produced by many plants in response to stress or injury and have long been used for their antimicrobial, anti-inflammatory, and antioxidant properties. Among resin-producing genera, Commiphora Jacq. (Burseraceae) stands out for the traditional and medicinal relevance of its oleogum resins, commonly known as myrrh. In this study, we investigated, for the first time, the non-volatile fraction of the oleogum resin of Commiphora ornifolia (Balf.f.) J.B.Gillett, which is an endemic species of Socotra Island. Ethanol extraction followed by chromatographic and spectroscopic analysis (HPLC-DAD, NMR, HRMS) led to the isolation of (+)-yangambin, a furofuran lignan not previously reported in this species. Quantitative analysis showed yangambin to be present in all eight resin samples analyzed, at concentrations ranging from 3.50 (±0.02) to 9.05% (±0.19) of the ethanol extract. In addition, the analysis of the hydrolyzed polysaccharide fraction revealed the presence of arabinose, rhamnose, galactose, and galacturonic acid. These preliminary findings highlight the phytochemical richness of C. ornifolia oleogum resin and suggest the presence of other potentially bioactive compounds. The presence of yangambin, known for various pharmacological activities, supports further phytochemical and biological studies on this largely unexplored species. Full article
(This article belongs to the Topic Natural Compounds in Plants, 2nd Volume)
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4 pages, 193 KB  
Proceeding Paper
The Antioxidant Power of an Algerian Dry Date Variety Phoenix dactylifera L.
by Hadria Mansour-Djaalab, Imene Djaalab, Samia Haffaf and Foulla Riachi
Biol. Life Sci. Forum 2025, 49(1), 10; https://doi.org/10.3390/blsf2025049010 - 26 Sep 2025
Viewed by 122
Abstract
The date palm (Phoenix dactylifera L.), which is the pivot of oasian agriculture, offers a range of agricultural by-products, which remain very poorly exploited and are still used in a traditional way in animal rations. Date waste or dry dates are the [...] Read more.
The date palm (Phoenix dactylifera L.), which is the pivot of oasian agriculture, offers a range of agricultural by-products, which remain very poorly exploited and are still used in a traditional way in animal rations. Date waste or dry dates are the result of sorting after harvest, accounting for 25% of annual date production. This co-product of poor quality and low market value has been shown to be rich in various secondary metabolites endowed with antioxidant and anti-radical properties. In order to make the most of Algerian oasian flora, a potential source of bioactive natural molecules, a chemical and biological study of three parts of the fruit of the Phoenix dactylifera plant (‘N’ stone, ‘P’ pulp and ‘N + P’ whole dates) was carried out. The bioactivities of hydro-methanolic extracts were assessed by determining antioxidant activity. The date pulp ‘P’ showed better anti-free radical activity with the DPPH test (p < 0.01). The bioactive substances isolated in the stone fractions ‘N’ showed excellent antioxidant activity with the ABTS test (p < 0.05). Moreover, the raw extract of N showed excellent antioxidant activity superior to that of the standard BHT with the CUPRAC test (p < 0.001). The fruits of Phoenix dactylifera and mainly the stones ‘N’ have excellent antioxidant activity and abundant secondary metabolites, which could provide corroborating evidence in terms of the potential elimination of free radicals from the fruit. Full article
37 pages, 2255 KB  
Review
Phytochemistry and Pharmacological Potential of the Mangrove Plant Sonneratia caseolaris: A Comprehensive Review
by Federico Cerri and Paolo Galli
Mar. Drugs 2025, 23(10), 378; https://doi.org/10.3390/md23100378 - 26 Sep 2025
Viewed by 606
Abstract
Mangroves represent a promising yet underexplored source of natural products. Sonneratia caseolaris (mangrove apple) is a widely distributed species with a long history of use in traditional medicine, and it is receiving increasing recognition for its bioactive secondary metabolites. Research has expanded in [...] Read more.
Mangroves represent a promising yet underexplored source of natural products. Sonneratia caseolaris (mangrove apple) is a widely distributed species with a long history of use in traditional medicine, and it is receiving increasing recognition for its bioactive secondary metabolites. Research has expanded in recent decades, but findings remain dispersed across diverse sources, complicating interpretation of its chemistry and pharmacological potential. This review consolidates four decades of investigations, documenting 141 identified compounds from studies largely restricted to India, Bangladesh, Indonesia, and China and focusing on leaves, fruits, bark, stems, and twigs, with roots notably unexplored. The phytochemical profile is dominated by phenolic acids, flavonoids, and tannins, alongside terpenoids, steroids, fatty acids, fatty alcohols, aldehydes, hydrocarbons, and polysaccharides. The most extensively studied activities are antioxidant and antimicrobial, with extracts consistently exhibiting strong free-radical scavenging capacity and broad-spectrum antibacterial and antifungal effects, including efficacy against drug-resistant strains. Additional reports describe central nervous system depressant, antidiarrheal, metabolic, anti-inflammatory, analgesic, antipyretic, and anti-allergic activities. In contrast, anticancer investigations remain scarce, despite promising outcomes reported for related mangrove taxa. By consolidating and critically evaluating the existing evidence, this review highlights the pharmacological potential of S. caseolaris and identifies key knowledge gaps to guide future marine drug discovery. Full article
(This article belongs to the Special Issue International Summer School of Blue Biotechnology)
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15 pages, 1970 KB  
Article
Untargeted LC-IMS-qToF-MS-Based Lipidomics Approach to Evaluate the Effect of a Polyphenol-Rich Beverage on Human Lipid Profiles
by Simone Stegmüller, Marleen Huber, Celina Rahn, Tamara Bakuradze, Jens Galan and Elke Richling
Int. J. Mol. Sci. 2025, 26(19), 9417; https://doi.org/10.3390/ijms26199417 - 26 Sep 2025
Viewed by 262
Abstract
Polyphenols are an important class of secondary metabolites that possess antioxidant or anti-inflammatory properties and are associated with many health benefits. It has been reported that extracts of fruit juices or the fruit juices themselves are able to influence lipid metabolism. The aims [...] Read more.
Polyphenols are an important class of secondary metabolites that possess antioxidant or anti-inflammatory properties and are associated with many health benefits. It has been reported that extracts of fruit juices or the fruit juices themselves are able to influence lipid metabolism. The aims of this study were to establish a reliable analytical method and thereafter investigate the influence of a polyphenol-rich fruit juice during an eight-week intervention on plasma lipid profiles in healthy male subjects. A placebo-controlled intervention study with 36 healthy male subjects was carried out. Volunteers consumed 750 mL of a polyphenol-rich or placebo beverage on a daily basis. With the established untargeted LC-IMS-qTof method, lipids could be identified, and changes in the lipidome could be detected. For the first time, a comparison of the lipidome of the control vs. treatment group allowed for the identification of differences in lipid profiles. The observed changes suggest that polyphenol intake leads to the targeted re-modeling of the lipidome, affecting bioactive lipid mediators and membrane components in particular. In the future, our identified lipid markers may be established as potential biomarker candidates related to health. Full article
(This article belongs to the Special Issue Lipid Metabolism in Human Health and Diseases)
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17 pages, 5455 KB  
Article
Untargeted Metabolomics Reveals the Effect of Carbon Dots on Improving the Shelf Life of Postharvest Goji Berries (Lycium barbarum L.)
by Yuan-Zhe Wang, Juan Du, Wen-Ping Ma, Run-Hui Ma, Kiran Thakur, Zhi-Jing Ni, Wei Wang and Zhao-Jun Wei
Foods 2025, 14(19), 3336; https://doi.org/10.3390/foods14193336 - 26 Sep 2025
Viewed by 391
Abstract
Lycium barbarum L. (goji berry) undergoes rapid quality deterioration after harvest owing to its high water activity and abundant reactive oxygen species (ROS). Carbon-dot-mediated photodynamic treatment (CD-PDT) has recently been shown to extend shelf life by modulating ROS-scavenging and defense enzymes, yet the [...] Read more.
Lycium barbarum L. (goji berry) undergoes rapid quality deterioration after harvest owing to its high water activity and abundant reactive oxygen species (ROS). Carbon-dot-mediated photodynamic treatment (CD-PDT) has recently been shown to extend shelf life by modulating ROS-scavenging and defense enzymes, yet the global metabolic reprogramming that supports this protection remains unresolved. Here, we applied ultra-high-performance liquid chromatography–tandem mass spectrometry (HPLC-MS/MS)-based untargeted metabolomics to decode the metabolic footprint of CD-PDT in freshly harvested goji berries. Our results revealed a total of 17,603 differentially expressed metabolites between the treatment and control groups under both positive- and negative-ion modes. Principal component analysis indicated that CD-mediated PDT significantly altered the metabolic profile of fresh goji berries. The treatment activated the phenylpropanoid biosynthesis pathway, promoting the accumulation of compounds such as kaempferol-3-sophoroside, kaempferol-3-O-β-D-glucoside, and galactoside, thereby enhancing the antioxidant capacity of the fruit. Furthermore, CD-mediated PDT induced the tricarboxylic acid cycle, providing sufficient energy to support the phenylpropanoid biosynthesis pathway. In conclusion, these findings provide the systems-level evidence that CD-PDT orchestrates a coordinated activation of primary and secondary metabolism in postharvest goji berries, establishing a mechanistic framework for preservation of horticultural products. Full article
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18 pages, 1236 KB  
Review
The Current State of Knowledge About Changes in the Synthesis of the Secondary Metabolites Caused by Habitat Conditions and Microbial Activity
by Barbara Bacler-Żbikowska, Agnieszka Hutniczak, Barbara Pilawa, Ewa Chodurek, Magdalena Zdybel, Anna Piekarska-Stachowiak, Dewi Fatmawati, Leszek Malinowski and Gabriela Woźniak
Agronomy 2025, 15(10), 2251; https://doi.org/10.3390/agronomy15102251 - 23 Sep 2025
Viewed by 396
Abstract
This comprehensive review paper describes how stressful environmental conditions affect the amounts and types of secondary metabolites synthetized by plants, with particular emphasis on plants that spontaneously grow on post-mining sites. Secondary metabolites are compounds that are not directly necessary for the performance [...] Read more.
This comprehensive review paper describes how stressful environmental conditions affect the amounts and types of secondary metabolites synthetized by plants, with particular emphasis on plants that spontaneously grow on post-mining sites. Secondary metabolites are compounds that are not directly necessary for the performance of basic life functions by plants but play an important role in the protection against adverse biotic and abiotic factors. Stress conditions stimulate the synthesis of secondary metabolites. The challenging post-mining sites are spontaneously colonized by many plant species, including medical plants. This observation inspired us to conduct the present review study. Apart from the abiotic conditions, the synthesis of secondary metabolites is also influenced by symbionts such as mycorrhizal fungi. A common effect of abiotic stressors is oxidative damage caused by reactive oxygen species (ROS). Metabolites such as antioxidants maintain the level of ROS at a level safe for the organism. This article presents the current state of knowledge about the impact of habitat conditions on the synthesis of secondary metabolites, which could impact the plant species growing spontaneously in post-mining areas. It considers the possibility of using such post-mining, mineral habitats to enhance these physiological mechanisms for synthesizing secondary metabolites. Full article
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23 pages, 1444 KB  
Review
Streptococcus thermophilus: Metabolic Properties, Functional Features, and Useful Applications
by Alyaa Zaidan Ghailan and Alaa Kareem Niamah
Appl. Microbiol. 2025, 5(4), 101; https://doi.org/10.3390/applmicrobiol5040101 - 23 Sep 2025
Viewed by 928
Abstract
Streptococcus thermophilus is a Gram-positive, homofermentative lactic acid bacterium classified within the Firmicutes phylum, recognized for its probiotic properties and significant role in promoting human health. This review consolidates existing understanding of its metabolic pathways, functional metabolites, and diverse applications, highlighting evidence-based insights [...] Read more.
Streptococcus thermophilus is a Gram-positive, homofermentative lactic acid bacterium classified within the Firmicutes phylum, recognized for its probiotic properties and significant role in promoting human health. This review consolidates existing understanding of its metabolic pathways, functional metabolites, and diverse applications, highlighting evidence-based insights to enhance scientific integrity. S. thermophilus predominantly ferments lactose through the Embden-Meyerhof-Parnas pathway, resulting in L(+)-lactic acid as the primary end-product, along with secondary metabolites including acetic acid, formic acid, and pyruvate derivatives. Exopolysaccharides (EPS) are composed of repeating units of glucose, galactose, rhamnose, and N-acetylgalactosamine. They display strain-specific molecular weights ranging from 10 to 2000 kDa and contribute to the viscosity of fermented products, while also providing antioxidant and immunomodulatory benefits. Aromatic compounds such as acetaldehyde and phenylacetic acid are products of amino acid catabolism and carbohydrate metabolism, playing a significant role in the sensory characteristics observed in dairy fermentations. Bacteriocins, such as thermophilins (e.g., Thermophilin 13, 110), exhibit extensive antimicrobial efficacy against pathogens including Listeria monocytogenes and Bacillus cereus. Their activity is modulated by quorum-sensing mechanisms that involve the blp gene cluster, and they possess significant stability under heat and pH variations, making them suitable for biopreservation applications. In food applications, S. thermophilus functions as a Generally Recognized as Safe (GRAS) starter culture in the production of yogurt and cheese, working in conjunction with Lactobacillus delbrueckii subsp. bulgaricus to enhance acidification and improve texture. Specific strains have been identified to mitigate lactose intolerance, antibiotic-related diarrhea, and inflammatory bowel diseases through the modulation of gut microbiota, the production of short-chain fatty acids, and the inhibition of Helicobacter pylori. The genome, characterized by a G + C content of approximately 37 mol%, facilitates advancements in Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-Cas technology and heterologous protein expression, with applications extending to non-dairy fermentations and the development of postbiotics. This review emphasizes the adaptability of S. thermophilus, showcasing the variability among strains and the necessity for thorough preclinical and clinical validation to fully utilize its potential in health, sustainable agriculture, and innovation. It also addresses challenges such as susceptibility to bacteriophages and limitations in proteolytic activity. Full article
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14 pages, 1161 KB  
Article
Antioxidant and Photoprotective Capacity of Secondary Metabolites Isolated from Pseudocyphellaria berberina
by Cecilia Rubio, Javiera Ramírez, José L. Rojas, Norma A. Valencia-Islas, Carolina Campos and Natalia Quiñones
Molecules 2025, 30(18), 3833; https://doi.org/10.3390/molecules30183833 - 22 Sep 2025
Viewed by 367
Abstract
Exposure to sunlight, whose main component is UV radiation (UVR), leads to various skin damage such as sunburns, premature aging, or more severe issues such as increased symptoms of autoimmune disease and skin cancer. Therefore, there is a growing interest in developing improved [...] Read more.
Exposure to sunlight, whose main component is UV radiation (UVR), leads to various skin damage such as sunburns, premature aging, or more severe issues such as increased symptoms of autoimmune disease and skin cancer. Therefore, there is a growing interest in developing improved photoprotective agents that can protect skin from sunlight incidence and antioxidants that counteract the oxidative stress caused by it. Lichens are a source of such agents since they adapt to extreme environments including those with high UVR by biosynthesizing metabolites with those properties. In this study, brialmontin 2 (1), physciosporin (2), and pseudocyphellarin A (3) were isolated for the first time from the lichen Pseudocyphellaria berberina (G. Forst.) D. J. Galloway & P. James, along with calycin (4) and 22-hydroxystictan-3-one (5). Their structural characterization was carried out by spectroscopy (1H and 13C NMR). Sun protection factor (SPF) along with critical wavelength (λcrit), a UVA/UVB ratio (UVA/UVB-r) of one to five, and acetone extract (AE) were evaluated spectrophotometrically as a measure of their UVB and UVA photoprotective capacities, respectively. Additionally, their antioxidant activity was measured by scavenging DPPH free radicals (RSA). Compounds 2, 4, and AE showed “medium” UVB photoprotective capacities (with SPFs between 15 and 30). Additionally, 4 and AE presented “maximum” UVA photoprotective capacities (λcrit > 370 nm and UVA/UVB-r > 0.8), whereas this activity was “good” for 2 and 3crit 350 to 370 nm and UVA/UVB-r 0.4 to 0.6), and “moderate” for 1crit 335 to 350 nm and UVA/UVB-r 0.2 to 0.4). All compounds and AE showed antioxidant activity, standing out were AE and 4 with activity comparable to the controls (ca. 95 and 81 RSA %, respectively, at 1000 ppm). AE and 4 are dual agents with photoprotective (UVB-UVA) and antioxidant capacities that could help prevent skin damage associated with sunlight. In silico assays suggest that 4 spontaneously diffuses into the stratum corneum with limited absorption through the skin. Additionally, 4 lacks potential toxicity to Normal Human Epidermal Keratinocytes (showing viability ca. 70% at 100 ppm); therefore, it is a candidate for the development of sunscreen formulations. Full article
(This article belongs to the Special Issue Exploring the Therapeutic Potential of Natural Antioxidants)
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Article
Leguminous Cover Crops Promote Microbial Community Diversity in the Rhizosphere Soil of Tea Plants: Insights from 16S rRNA Microbiome Analysis
by Sabin Saurav Pokharel, Zahid Ali, Changyu Wang, Xingfu Jiang and Fajun Chen
Agronomy 2025, 15(9), 2217; https://doi.org/10.3390/agronomy15092217 - 19 Sep 2025
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Abstract
The integration of leguminous cover cropping systems (LCR), particularly soybean (LC-S) and cowpea (LC-C), into tea agroecosystem provides a sustainable strategy to enhance soil ecosystem services by promoting beneficial soil microbial communities through the modulation of the rhizosphere microbiome in the tea rhizosphere [...] Read more.
The integration of leguminous cover cropping systems (LCR), particularly soybean (LC-S) and cowpea (LC-C), into tea agroecosystem provides a sustainable strategy to enhance soil ecosystem services by promoting beneficial soil microbial communities through the modulation of the rhizosphere microbiome in the tea rhizosphere soil. This study employs 16S rRNA gene sequencing to assess how these leguminous cover crops, when incorporated as green manure within the tea row spaces, influence the microbial community diversity in the rhizosphere soil of tea plants. Compared to conventional monoculture tea plantations (CK), the introduction of LC-S and LC-C significantly reshape the microbial communities in the tea rhizosphere soil. They promote the abundance of copiotrophic and specialized taxa such as Proteobacteria, Actinobacteria, and Mycobacterium, which are crucial for nutrient cycling and organic matter decomposition. Additionally, LC-S and LC-C enrich beneficial microbes including Chloroflexi, Bradyrhizobium, Acidothermus, and Cyanobacteria, supporting processes like nitrogen fixation and pathogen suppression. The metagenomic analysis confirms that leguminous cover crops consistently increase bacterial diversity and enrich beneficial phyla vital for soil nutrient dynamics, organic matter breakdown, and environmental stress resilience. Furthermore, microbial genera linked to nitrogen mobilization and complex organic matter degradation are promoted, underpinning the synthesis of nitrogenous compounds (such as theanine, amino acids), polyphenolic secondary metabolites (like flavonoids), and volatile organic compounds essential for tea quality. Functional pathway analyses revealed that LC-S enhances degradation pathways involved in carbohydrate and aromatic compound metabolism, augmenting precursors for key bioactive constituents such as theanine and catechins. Conversely, LC-C favors glycan biosynthesis and degradation pathways, likely improving root–microbe interactions and micronutrient uptake, both critical for polyphenol biosynthesis. Collectively, these microbiome-driven changes improve tea’s sensory qualities, including flavor, aroma, and antioxidant capacity, by enriching bioactive compounds. This microbiome-mediated agro-ecological approach offers a sustainable alternative to conventional monoculture, enhancing soil functionality, ecological resilience, and the economic viability of tea production systems. Full article
(This article belongs to the Section Innovative Cropping Systems)
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