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Search Results (323)

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Keywords = carbon and nitrogen coupling

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24 pages, 2449 KB  
Article
Synthesis and Characterization of a New Hydrogen-Bond-Stabilized 1,10-Phenanthroline–Phenol Schiff Base: Integrated Spectroscopic, Electrochemical, Theoretical Studies, and Antimicrobial Evaluation
by Alexander Carreño, Evys Ancede-Gallardo, Ana G. Suárez, Marjorie Cepeda-Plaza, Mario Duque-Noreña, Roxana Arce, Manuel Gacitúa, Roberto Lavín, Osvaldo Inostroza, Fernando Gil, Ignacio Fuentes and Juan A. Fuentes
Chemistry 2025, 7(4), 135; https://doi.org/10.3390/chemistry7040135 - 21 Aug 2025
Viewed by 565
Abstract
A new Schiff base, (E)-2-(((1,10-phenanthrolin-5-yl)imino)methyl)-4,6-di-tert-butylphenol (Fen-IHB), was designed to incorporate an intramolecular hydrogen bond (IHB) between the phenolic OH and the azomethine nitrogen with the goal of modulating its physicochemical and biological properties. Fen-IHB was synthesized by condensation of [...] Read more.
A new Schiff base, (E)-2-(((1,10-phenanthrolin-5-yl)imino)methyl)-4,6-di-tert-butylphenol (Fen-IHB), was designed to incorporate an intramolecular hydrogen bond (IHB) between the phenolic OH and the azomethine nitrogen with the goal of modulating its physicochemical and biological properties. Fen-IHB was synthesized by condensation of 5-amino-1,10-phenanthroline with 3,5-di-tert-butyl-2-hydroxybenzaldehyde and exhaustively characterized by HR-ESI-MS, FTIR, 1D/2D NMR (1H, 13C, DEPT-45, HH-COSY, CH-COSY, D2O exchange), and UV–Vis spectroscopy. Cyclic voltammetry in anhydrous CH3CN revealed a single irreversible cathodic peak at −1.43 V (vs. Ag/Ag+), which is consistent with the intramolecular reductive coupling of the azomethine moiety. Density functional theory (DFT) calculations, including MEP mapping, Fukui functions, dual descriptor analysis, and Fukui potentials with dual descriptor potential, identified the exocyclic azomethine carbon as the principal nucleophilic site and the phenolic ring (hydroxyl oxygen and adjacent carbons) as the main electrophilic region. Noncovalent interaction (NCI) analysis further confirmed the strength and geometry of the intramolecular hydrogen bond (IHB). In vitro antimicrobial assays indicated that Fen-IHB was inactive against Gram-negative facultative anaerobes (Salmonella enterica serovar Typhimurium and Typhi, Escherichia coli) and strictly anaerobic Gram-positive species (Clostridioides difficile, Roseburia inulinivorans, Blautia coccoides), as any growth inhibition was indistinguishable from the DMSO control. Conversely, Fen-IHB displayed measurable activity against Gram-positive aerobes and aerotolerant anaerobes, including Bacillus subtilis, Streptococcus pyogenes, Enterococcus faecalis, Staphylococcus aureus, and Staphylococcus haemolyticus. Overall, these comprehensive characterization results confirm the distinctive chemical and electronic properties of Fen-IHB, underlining the crucial role of the intramolecular hydrogen bond and electronic descriptors in defining its reactivity profile and selective biological activity. Full article
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20 pages, 3960 KB  
Article
Laboratory-Scale Biochar-Aerated Constructed Wetlands for Low C/N Wastewater: Standardization and Legal Cooperation from a Watershed Restoration Perspective
by Mengbing Li, Sili Tan, Jiajun Huang, Qianhui Chen and Guanlong Yu
Water 2025, 17(16), 2482; https://doi.org/10.3390/w17162482 - 21 Aug 2025
Viewed by 422
Abstract
To address the problems of eutrophication exacerbation in water bodies caused by low carbon-to-nitrogen ratio (C/N) wastewater and the limited nitrogen removal efficiency of conventional constructed wetlands, this study proposes the use of biochar (Corncob biochar YBC, Walnut shell biochar HBC, and [...] Read more.
To address the problems of eutrophication exacerbation in water bodies caused by low carbon-to-nitrogen ratio (C/N) wastewater and the limited nitrogen removal efficiency of conventional constructed wetlands, this study proposes the use of biochar (Corncob biochar YBC, Walnut shell biochar HBC, and Manure biochar FBC) coupled with intermittent aeration technology to enhance nitrogen removal in constructed wetlands. Through the construction of vertical flow wetland systems, hydraulic retention time (HRT = 1–3 d) and influent C/N ratios (1, 3, 5) were regulated, before being combined with material characterization (FTIR/XPS) and microbial analysis (16S rRNA) to reveal the synergistic nitrogen removal mechanisms. HBC achieved efficient NH4+-N adsorption (32.44 mg/L, Langmuir R2 = 0.990) through its high porosity (containing Si-O bonds) and acidic functional groups. Under optimal operating conditions (HRT = 3 d, C/N = 5), the CW-HBC system achieved removal efficiencies of 97.8%, 98.8%, and 79.6% for NH4+-N, TN, and COD, respectively. The addition of biochar shifted the dominant bacterial phylum toward Actinobacteriota (29.79%), with its slow-release carbon source (TOC = 18.5 mg/g) alleviating carbon limitation. Mechanistically, HBC synergistically optimized nitrogen removal pathways through “adsorption-biofilm (bacterial enrichment)-microzone oxygen regulation (pore oxygen gradient).” Based on technical validation, a dual-track institutionalization pathway of “standards-legislation” is proposed: incorporating biochar physicochemical parameters and aeration strategies into multi-level water environment technical standards; converting common mechanisms (such as Si-O adsorption) into legal requirements through legislative amendments; and innovating legislative techniques to balance precision and universality. This study provides an efficient technical solution for low C/N wastewater treatment while constructing an innovative framework for the synergy between technical specifications and legislation, supporting the improvement of watershed ecological restoration systems. Full article
(This article belongs to the Section Wastewater Treatment and Reuse)
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17 pages, 4949 KB  
Article
Dynamic Coupling Mechanism of Soil Microbial Community Shifts and Nutrient Fluxes During the Life Cycle of Dictyophora rubrovolvata
by Zilin Song, Xueli Li, Mengdi Xie, Juan Lu, Dapeng Bao and Shengjuan Jiang
Horticulturae 2025, 11(8), 989; https://doi.org/10.3390/horticulturae11080989 - 20 Aug 2025
Viewed by 229
Abstract
As a rare edible mushroom, Dictyophora rubrovolvata possesses remarkable anti-tumor, anti-inflammatory, and antioxidant properties. However, continuous-cropping obstacles during cultivation significantly reduce soil reuse efficiency and adversely affect yield. To reveal a potential mechanism of continuous-cropping soil obstacles and propose some green precision cultivation [...] Read more.
As a rare edible mushroom, Dictyophora rubrovolvata possesses remarkable anti-tumor, anti-inflammatory, and antioxidant properties. However, continuous-cropping obstacles during cultivation significantly reduce soil reuse efficiency and adversely affect yield. To reveal a potential mechanism of continuous-cropping soil obstacles and propose some green precision cultivation strategies, the soil samples throughout the five growth stages of D. rubrovolvata were collected and systematically analyzed, including soil nutrient contents, pH, and dynamic changes in soil microbial communities. The results showed that soil organic carbon consumption was relatively high during the whole growth cycle. The total nitrogen consumption was greater during mycelial and primordium stages. The total phosphorus content began to exceed control from the egg stage. The total potassium and pH levels were both higher than control, exhibiting an upward trend. The bacterial species in the soil gradually increased with the growth of fruiting bodies, while the fungal species showed a declining trend. Moreover, there were significant differences in dominant bacteria and fungi in the soil during different growth stages. Further analysis revealed a dynamic coupling relationship among the soil microbial community, soil nutrient content, and pH during whole life cycle. This research would provide theoretical and technical support for the sustainable development of the edible mushroom industry. Full article
(This article belongs to the Section Plant Nutrition)
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15 pages, 4270 KB  
Article
Subsoiling-Induced Shifts in Nitrogen Dynamics and Microbial Community Structure in Semi-Arid Rainfed Maize Agroecosystems
by Jian Gu, Hao Sun, Xu Zhou, Yongqi Liu, Mingwei Zhou, Ningning Ma, Guanghua Yin and Shijun Sun
Microorganisms 2025, 13(8), 1897; https://doi.org/10.3390/microorganisms13081897 - 14 Aug 2025
Viewed by 318
Abstract
Global agricultural intensification has exacerbated soil compaction and nitrogen (N) inefficiency, thereby threatening sustainable crop production. Sub-soiling, a tillage technique that fractures subsurface layers while preserving surface structure, offers potential solutions by modifying soil physical properties and enhancing microbial-mediated N cycling. This study [...] Read more.
Global agricultural intensification has exacerbated soil compaction and nitrogen (N) inefficiency, thereby threatening sustainable crop production. Sub-soiling, a tillage technique that fractures subsurface layers while preserving surface structure, offers potential solutions by modifying soil physical properties and enhancing microbial-mediated N cycling. This study investigated the effects of subsoiling depth (0, 20, and 40 cm) on soil microbial communities and N transformations in a semi-arid maize system in China. The results demonstrated that subsoiling to a depth of 40 cm (D2) significantly enhanced the retention of nitrate-N and ammonium-N, which correlated with improved soil porosity and microbial activity. High-throughput 16S rDNA sequencing revealed subsoiling depth-driven reorganization of microbial communities, with D2 increasing the abundance of Proteobacteria (+11%) and ammonia-oxidizing archaea (Nitrososphaeraceae, +19.9%) while suppressing denitrifiers (nosZ gene: −41.4%). Co-occurrence networks indicated greater complexity in microbial interactions under subsoiling, driven by altered aeration and carbon redistribution. Functional gene analysis highlighted a shift from denitrification to nitrification-mineralization coupling, with D2 boosting maize yield by 9.8%. These findings elucidate how subsoiling depth modulates microbiome assembly to enhance N retention, providing a mechanistic basis for optimizing tillage practices in semi-arid agroecosystems. Full article
(This article belongs to the Special Issue Microbial Communities and Nitrogen Cycling)
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18 pages, 11654 KB  
Article
Reservoir Characterization and 3D Geological Modeling of Fault-Controlled Karst Reservoirs: A Case Study of the Typical Unit of the TP12CX Fault Zone in the Tuoputai Area, Tahe Oilfield
by Bochao Tang, Chenggang Li, Chunying Geng, Bo Liu, Wenrui Li, Chen Guo, Lihong Song, Chao Yu and Binglin Li
Processes 2025, 13(8), 2529; https://doi.org/10.3390/pr13082529 - 11 Aug 2025
Viewed by 289
Abstract
This study presents an integrated workflow for the characterization of fault-controlled fractured–vuggy reservoirs, demonstrated through a comprehensive analysis of the TP12CX fault zone in the Tahe Oilfield. The methodology establishes a four-element structural model—comprising the damage zone, fault core, vuggy zone, and cavern [...] Read more.
This study presents an integrated workflow for the characterization of fault-controlled fractured–vuggy reservoirs, demonstrated through a comprehensive analysis of the TP12CX fault zone in the Tahe Oilfield. The methodology establishes a four-element structural model—comprising the damage zone, fault core, vuggy zone, and cavern system—coupled with a multi-attribute geophysical classification scheme integrating texture contrast, deep learning, energy envelope, and residual impedance attributes. This framework achieves a validation accuracy of 91.2%. A novel structural element decomposition–integration approach is proposed, combining deterministic structural reconstruction with facies-constrained petrophysical modeling to quantify reservoir properties. The resulting models identify key heterogeneities, including caverns (Φ = 17.8%, K = 587 mD), vugs (Φ = 3.5%, K = 25 mD), and fractures (K = 1400 mD), with model reliability verified through production history matching. Field application of an optimized nitrogen foam flooding strategy, guided by this workflow, resulted in an incremental oil recovery of 3292 tons. The proposed methodology offers transferable value by addressing critical challenges in karst reservoir characterization, including seismic resolution limits, complex heterogeneity, and late-stage development optimization in fault-controlled carbonate reservoirs. It provides a robust and practical framework for enhanced oil recovery in structurally complex carbonate reservoirs, particularly those in mature fields with a high water cut. Full article
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14 pages, 2413 KB  
Article
Effect of Carbon and Nitrogen Concentrations on the Superconducting Properties of (NbMoTaW)1CxNy Carbonitride Films
by Gabriel Pristáš, Slavomír Gabáni, Petra Hviščová, Jozef Dobrovodský, Dmitry Albov, Maksym Lisnichuk, Oleksandr Onufriienko, Janina Zorych, František Lofaj and Karol Flachbart
Materials 2025, 18(16), 3732; https://doi.org/10.3390/ma18163732 - 8 Aug 2025
Viewed by 324
Abstract
We report about the effect of nitrogen and carbon concentration on the superconducting transition temperature TC of (NbMoTaW)1CxNy carbonitride films deposited using reactive DC magnetron sputtering. By measuring the temperature dependence of electrical resistance and magnetization of [...] Read more.
We report about the effect of nitrogen and carbon concentration on the superconducting transition temperature TC of (NbMoTaW)1CxNy carbonitride films deposited using reactive DC magnetron sputtering. By measuring the temperature dependence of electrical resistance and magnetization of these carbonitrides, with 0.20 ≤ x ≤ 1.17 and 0 ≤ y ≤ 0.73, we observe a TC enhancement that occurs especially at high (x ≥ 0.76) carbon concentrations, with the largest TC = 9.6 K observed in the over-doped fcc crystal structure with x = 1.17 and y = 0.41. The reason why the largest TC appears at high C concentrations is probably related to the lower atomic mass of carbon compared to nitrogen and to the increase in the electron–phonon interaction due to different bonding of carbon (compared to nitrogen) to the Nb-Mo-Ta-W metallic sublattice. However, for concentrations where y > 0.71 and x + y > 1.58, two structural phases begin to form. Additionally, the proximity to structural instability may play a role in the observed BC2 enhancement. Further measurements in a magnetic field show that the upper critical fields BC2 of (NbMoTaW)1CxNy carbonitrides provide BC2/BC2 < 2 T/K, which falls within the weak-coupling pair breaking limit. Full article
(This article belongs to the Special Issue High-Entropy Alloys: Synthesis, Characterization, and Applications)
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20 pages, 7313 KB  
Article
Integrated Modeling of Composition-Resolved Source Apportionment and Dynamic Projection for Ozone Pollution in Datong
by Xiaofeng Yao, Tongshun Han, Zexuan Yang, Xiaohui Zhang and Liang Pei
Toxics 2025, 13(8), 666; https://doi.org/10.3390/toxics13080666 - 8 Aug 2025
Viewed by 396
Abstract
Growing ozone (O3) pollution in industrial cities urgently requires in-depth mechanistic research. This study utilized multi-year observational data from Datong City, China, from 2020 to 2024, integrating time trend diagnostics, correlation dynamics analysis, Environmental Protection Agency Positive Matrix Factorization 5.0 (EPA [...] Read more.
Growing ozone (O3) pollution in industrial cities urgently requires in-depth mechanistic research. This study utilized multi-year observational data from Datong City, China, from 2020 to 2024, integrating time trend diagnostics, correlation dynamics analysis, Environmental Protection Agency Positive Matrix Factorization 5.0 (EPA PMF 5.0) model simulations, and a grey prediction model (GM (1,1)) projection method to reveal the coupling mechanisms among O3 precursors. Key breakthroughs include the following: (1) A ratio of volatile organic compounds (VOCs) to nitrogen oxides (NOx) of 1.5 clearly distinguishes between NOx-constrained (winter) and VOC-sensitive (summer) modes, a conclusion validated by the strong negative correlation between O3 and NOx (r = −0.80, p < 0.01) and the dominant role of NO titration. (2) Aromatic compounds (toluene, xylene) used as solvents in industrial emissions, despite accounting for only 7.9% of VOC mass, drove 37.1% of ozone formation potential (OFP), while petrochemical and paint production (accounting for 12.2% of VOC mass) contributed only 0.3% of OFP. (3) Quantitative analysis of OFP using PMF identified natural gas/fuel gas use and leakage (accounting for 34.9% of OFP) and solvent use (accounting for 37.1% of OFP) as key control targets. (4) The GM (1,1) model predicts that, despite a decrease in VOC concentrations (−15.7%) and an increase in NOx concentrations (+2.4%), O3 concentrations will rise to 169.7 μg m−3 by 2025 (an increase of 7.4% compared to 2024), indicating an improvement in photochemical efficiency. We have established an activity-oriented prioritization framework targeting high-OFP species from key sources. This provides a scientific basis for precise O3 emission reductions consistent with China’s 15th Five-Year Plan for synergistic pollution/carbon governance. Full article
(This article belongs to the Special Issue Analysis of the Sources and Components of Aerosols in Air Pollution)
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17 pages, 3193 KB  
Article
Effects of Nitrogen and Phosphorus Additions on the Stability of Soil Carbon Fractions in Subtropical Castanopsis sclerophylla Forests
by Yunze Dai, Xiaoniu Xu and LeVan Cuong
Forests 2025, 16(8), 1264; https://doi.org/10.3390/f16081264 - 2 Aug 2025
Viewed by 305
Abstract
Soil organic carbon (SOC) pool plays an extremely important role in regulating the global carbon (C) cycle and climate change. Atmospheric nitrogen (N) and phosphorus (P) deposition caused by human activities has significant impacts on soil C sequestration potential of terrestrial ecosystem. To [...] Read more.
Soil organic carbon (SOC) pool plays an extremely important role in regulating the global carbon (C) cycle and climate change. Atmospheric nitrogen (N) and phosphorus (P) deposition caused by human activities has significant impacts on soil C sequestration potential of terrestrial ecosystem. To investigate the effects of N and P deposition on soil C sequestration and C-N coupling relationship in broad-leaved evergreen forests, a 6-year field nutrient regulation experiment was implemented in subtropical Castanopsis sclerophylla forests with four different N and P additions: N addition (100 kg N·hm−2·year−1), N + P (100 kg N·hm−2·year−1 + 50 kg P·hm−2·year−1), P addition (50 kg P·hm−2·year−1), and CK (0 kg N·hm−2·year−1). The changes in the C and N contents and stable isotope distributions (δ13C and δ15N) of different soil organic fractions were examined. The results showed that the SOC and total nitrogen (STN) (p > 0.05) increased with N addition, while SOC significantly decreased with P addition (p < 0.05), and N + P treatment has low effect on SOC, STN (p > 0.05). By density grouping, it was found that N addition significantly increased light fraction C and N (LFOC, LFN), significantly decreased the light fraction C to N ratio (LFOC/N) (p < 0.05), and increased heavy fraction C and N (HFOC, HFN) accumulation and light fraction to total organic C ratio (LFOC/SOC, p > 0.05). Contrary to N addition, P addition was detrimental to the accumulation of LFOC, LFN and reduced LFOC/SOC. It was found that different reactive oxidized carbon (ROC) increased under N addition but ROC/SOC did not change, while N + P and P treatments increased ROC/SOC, resulting in a decrease in SOC chemical stability. Stable isotope analysis showed that N addition promoted the accumulation of new soil organic matter, whereas P addition enhanced the transformation and utilization of C and N from pre-existing organic matter. Additionally, N addition indirectly increased LFOC by significantly decreasing pH; significantly contributed to LFOC and ROC by increasing STN accumulation promoted by NO3-N and NH4+-N; and decreased light fraction δ13C by significantly increasing dissolved organic C (p < 0.05). P addition had directly significant negative effect on LFOC and SOC (p < 0.05). In conclusion, six-year N deposition enhances soil C and N sequestration while the P enrichment reduces the content of soil C, N fractions and stability in Castanopsis sclerophylla forests. The results provide a scientific basis for predicting the soil C sink function of evergreen broad-leaved forest ecosystem under the background of future climate change. Full article
(This article belongs to the Section Forest Soil)
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16 pages, 2713 KB  
Article
Change in C, N, and P Characteristics of Hypericum kouytchense Organs in Response to Altitude Gradients in Karst Regions of SW China
by Yage Li, Chunyan Zhao, Jiajun Wu, Suyan Ba, Shuo Liu and Panfeng Dai
Plants 2025, 14(15), 2307; https://doi.org/10.3390/plants14152307 - 26 Jul 2025
Viewed by 231
Abstract
The environmental heterogeneity caused by altitude can lead to trade-offs in nutrient utilization and allocation strategies among plant organs; however, there is still a lack of research on the nutrient variation in the “flower–leaf–branch–fine root–soil” systems of native shrubs along altitude gradients in [...] Read more.
The environmental heterogeneity caused by altitude can lead to trade-offs in nutrient utilization and allocation strategies among plant organs; however, there is still a lack of research on the nutrient variation in the “flower–leaf–branch–fine root–soil” systems of native shrubs along altitude gradients in China’s unique karst regions. Therefore, we analyzed the carbon (C), nitrogen (N), and phosphorus (P) contents and their ratios in flowers, leaves, branches, fine roots, and surface soil of Hypericum kouytchense shrubs across 2200–2700 m altitudinal range in southwestern China’s karst areas, where this species is widely distributed and grows well. The results show that H. kouytchense organs had higher N content than both global and Chinese plant averages. The order of C:N:P value across plant organs was branches > fine roots > flowers > leaves. Altitude significantly affected the nutrient dynamics in plant organs and soil. With increasing altitude, P content in plant organs exhibited a significant concave pattern, leading to unimodal trends in the C:P of plant organs, as well as the N:P of leaves and fine roots. Meanwhile, plant organs except branches displayed significant homeostasis coefficients in C:P and fine root P, indicating a shift in H. kouytchense’s P utilization strategy from acquisitive-type to conservative-type. Strong positive relationships between plant organs and soil P and available P revealed that P was the key driver of nutrient cycling in H. kouytchense shrubs, enhancing plant organ–soil coupling relationships. In conclusion, H. kouytchense demonstrates flexible adaptability, suggesting that future vegetation restoration and conservation management projects in karst ecosystems should consider the nutrient adaptation strategies of different species, paying particular attention to P utilization. Full article
(This article belongs to the Special Issue Plant Functional Diversity and Nutrient Cycling in Forest Ecosystems)
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21 pages, 2263 KB  
Article
Elevational Patterns and Drivers of Soil Total, Microbial, and Enzymatic C:N:P Stoichiometry in Karst Peak-Cluster Depressions in Southwestern China
by Siyu Chen, Chaohao Xu, Cong Hu, Chaofang Zhong, Zhonghua Zhang and Gang Hu
Forests 2025, 16(8), 1216; https://doi.org/10.3390/f16081216 - 24 Jul 2025
Viewed by 367
Abstract
Elevational gradients in temperature, moisture, and vegetation strongly influence soil nutrient content and stoichiometry in mountainous regions. However, exactly how total, microbial, and enzymatic carbon (C), nitrogen (N), and phosphorus (P) stoichiometry vary with elevation in karst peak-cluster depressions remains poorly understood. To [...] Read more.
Elevational gradients in temperature, moisture, and vegetation strongly influence soil nutrient content and stoichiometry in mountainous regions. However, exactly how total, microbial, and enzymatic carbon (C), nitrogen (N), and phosphorus (P) stoichiometry vary with elevation in karst peak-cluster depressions remains poorly understood. To address this, we studied soil total, microbial, and enzymatic C:N:P stoichiometry in seasonal rainforests within karst peak-cluster depressions in southwestern China at different elevations (200, 300, 400, and 500 m asl) and depths (0–20 and 20–40 cm). We found that soil organic carbon (SOC), total nitrogen (TN), and the C:P and N:P ratios increased significantly with elevation, whereas total phosphorus (TP) decreased. Microbial phosphorus (MBP) also declined with elevation, while the microbial N:P ratio rose. Activities of nitrogen- (β-N-acetylglucosaminidase and L-leucine aminopeptidase combined) and phosphorus-related enzymes (alkaline phosphatase) increased markedly with elevation, suggesting potential phosphorus limitation for plant growth at higher elevations. Our results suggest that total, microbial, and enzymatic soil stoichiometry are collectively shaped by topography and soil physicochemical properties, with elevation, pH, and exchangeable calcium (ECa) acting as the key drivers. Microbial stoichiometry exhibited positive interactions with soil stoichiometry, while enzymatic stoichiometry did not fully conform to the expectations of resource allocation theory, likely due to the functional specificity of phosphatase. Overall, these findings enhance our understanding of C–N–P biogeochemical coupling in karst ecosystems, highlight potential nutrient limitations, and provide a scientific basis for sustainable forest management in tropical karst regions. Full article
(This article belongs to the Section Forest Soil)
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22 pages, 1438 KB  
Article
The Transcription Machinery and the Driving Force of the Transcriptional Molecular Condensate: The Role of Phosphates
by Raúl Riera Aroche, Esli C. Sánchez Moreno, Yveth M. Ortiz García, Andrea C. Machado Sulbarán, Lizbeth Riera Leal, Luis R. Olivas Román and Annie Riera Leal
Curr. Issues Mol. Biol. 2025, 47(7), 571; https://doi.org/10.3390/cimb47070571 - 20 Jul 2025
Viewed by 466
Abstract
The dynamic phosphorylation of the human RNA Pol II CTD establishes a code applicable to all eukaryotic transcription processes. However, the ability of these specific post-translational modifications to convey molecular signals through structural changes remains unclear. We previously explained that each gene can [...] Read more.
The dynamic phosphorylation of the human RNA Pol II CTD establishes a code applicable to all eukaryotic transcription processes. However, the ability of these specific post-translational modifications to convey molecular signals through structural changes remains unclear. We previously explained that each gene can be modeled as a combination of n circuits connected in parallel. RNA Pol II accesses these circuits and, through a series of pulses, matches the resonance frequency of the DNA qubits, enabling it to extract genetic information and quantum teleport it. Negatively charged phosphates react under RNA Pol II catalysis, which increases the electron density on the deoxyribose acceptor carbon (2’C in the DNA sugar backbone). The phosphorylation effect on the stability of a carbon radical connects tyrosine to the nitrogenous base, while the subsequent pulses link the protein to molecular water through hydrogen bonds. The selective activation of inert C(sp3)–H bonds begins by reading the quantum information stored in the nitrogenous bases. The coupling of hydrogen proton transfer with electron transfer in water generates a supercurrent, which is explained by the correlation of pairs of the same type of fermions exchanging a boson. All these changes lead to the formation of a molecular protein–DNA–water transcriptional condensate. Full article
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16 pages, 2652 KB  
Article
Evaluation of the Effect of Floating Treatment Wetlands Planted with Sesuvium portulacastrum on the Dynamics of Dissolved Inorganic Nitrogen, CO2, and N2O in Grouper Aquaculture Systems
by Shenghua Zheng, Man Wu, Jian Liu, Wangwang Ye, Yongqing Lin, Miaofeng Yang, Huidong Zheng, Fang Yang, Donglian Luo and Liyang Zhan
J. Mar. Sci. Eng. 2025, 13(7), 1342; https://doi.org/10.3390/jmse13071342 - 14 Jul 2025
Viewed by 307
Abstract
Aquaculture expansion to meet global protein demand has intensified concerns over nutrient pollution and greenhouse gas (GHG) emissions. While floating treatment wetlands (FTWs) are proven for water quality improvement, their potential to mitigate GHG emissions in marine aquaculture remains poorly understood. This study [...] Read more.
Aquaculture expansion to meet global protein demand has intensified concerns over nutrient pollution and greenhouse gas (GHG) emissions. While floating treatment wetlands (FTWs) are proven for water quality improvement, their potential to mitigate GHG emissions in marine aquaculture remains poorly understood. This study quantitatively evaluated the dual capacity of Sesuvium portulacastrum FTWs to (a) regulate dissolved inorganic nitrogen (DIN) and (b) reduce CO2/N2O emissions in grouper aquaculture systems. DIN speciation (NH4+, NO2, NO3) and CO2/N2O fluxes of six controlled ponds (three FTW and three control) were monitored for 44 days. DIN in the FTW group was approximately 90 μmol/L lower than that in the control group, and the water in the plant group was more “oxidative” than that in the control group. The former groups were dominated by NO3, with lower dissolved inorganic carbon (DIC) and N2O concentrations, whereas the latter were dominated by NH4+ during the first 20 days of the experiment and by NO2 at the end of the experiment, with higher DIC and N2O concentrations on average. Higher primary production may be the reason that the DIC concentration was lower in the plant group than in the control group, whereas efficient nitrification and uptake by plants reduced the availability of NH4+ in the plant group, thereby reducing the production of N2O. A comparison of the CO2 and N2O flux potentials in the plant group and control group revealed that, in the presence of FTWs, the CO2 and N2O emissions decreased by 14% and 36%, respectively. This showed that S. portulacastrum FTWs effectively couple DIN removal with GHG mitigation, offering a nature-based solution for sustainable aquaculture. Their low biomass requirement enhances practical scalability. Full article
(This article belongs to the Special Issue Coastal Geochemistry: The Processes of Water–Sediment Interaction)
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22 pages, 892 KB  
Review
Membrane Technologies for Bioengineering Microalgae: Sustainable Applications in Biomass Production, Carbon Capture, and Industrial Wastewater Valorization
by Michele Greque Morais, Gabriel Martins Rosa, Luiza Moraes, Larissa Chivanski Lopes and Jorge Alberto Vieira Costa
Membranes 2025, 15(7), 205; https://doi.org/10.3390/membranes15070205 - 11 Jul 2025
Viewed by 795
Abstract
In accordance with growing environmental pressures and the demand for sustainable industrial practices, membrane technologies have emerged as key enablers for increasing efficiency, reducing emissions, and supporting circular processes across multiple sectors. This review focuses on the integration among microalgae-based systems, offering innovative [...] Read more.
In accordance with growing environmental pressures and the demand for sustainable industrial practices, membrane technologies have emerged as key enablers for increasing efficiency, reducing emissions, and supporting circular processes across multiple sectors. This review focuses on the integration among microalgae-based systems, offering innovative and sustainable solutions for biomass production, carbon capture, and industrial wastewater treatment. In cultivation, membrane photobioreactors (MPBRs) have demonstrated biomass productivity up to nine times greater than that of conventional systems and significant reductions in water (above 75%) and energy (approximately 0.75 kWh/m3) footprints. For carbon capture, hollow fiber membranes and hybrid configurations increase CO2 transfer rates by up to 300%, achieving utilization efficiencies above 85%. Coupling membrane systems with industrial effluents has enabled nutrient removal efficiencies of up to 97% for nitrogen and 93% for phosphorus, contributing to environmental remediation and resource recovery. This review also highlights recent innovations, such as self-forming dynamic membranes, magnetically induced vibration systems, antifouling surface modifications, and advanced control strategies that optimize process performance and energy use. These advancements position membrane-based microalgae systems as promising platforms for carbon-neutral biorefineries and sustainable industrial operations, particularly in the oil and gas, mining, and environmental technology sectors, which are aligned with global climate goals and the UN Sustainable Development Goals (SDGs). Full article
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19 pages, 5983 KB  
Article
Fabrication of CoP@P, N-CNTs-Deposited Nickel Foam for Energy-Efficient Hydrogen Generation via Electrocatalytic Urea Oxidation
by Hany M. Youssef, Maged N. Shaddad, Saba A. Aladeemy and Abdullah M. Aldawsari
Catalysts 2025, 15(7), 652; https://doi.org/10.3390/catal15070652 - 4 Jul 2025
Viewed by 548
Abstract
The simultaneous generation of hydrogen fuel and wastewater remediation via electrocatalytic urea oxidation has emerged as a promising approach for sustainable energy and environmental solutions. However, the practical application of this process is hindered by the limited active sites and high charge-transfer resistance [...] Read more.
The simultaneous generation of hydrogen fuel and wastewater remediation via electrocatalytic urea oxidation has emerged as a promising approach for sustainable energy and environmental solutions. However, the practical application of this process is hindered by the limited active sites and high charge-transfer resistance of conventional anode materials. In this work, we introduce a novel CoP@P, N-CNTs/NF electrocatalyst, fabricated through a facile one-step thermal annealing technique. Comprehensive characterizations confirm the successful integration of CoP nanoparticles and phosphorus/nitrogen co-doped carbon nanotubes (P, N-CNTs) onto nickel foam, yielding a unique hierarchical structure that offers abundant active sites and accelerated electron transport. As a result, the CoP@P, N-CNTs/NF electrode achieves outstanding urea oxidation reaction (UOR) performance, delivering current densities of 158.5 mA cm−2 at 1.5 V and 232.95 mA cm−2 at 1.6 V versus RHE, along with exceptional operational stability exceeding 50 h with negligible performance loss. This innovative, multi-element-doped electrode design marks a significant advancement in the field, enabling highly efficient UOR and energy-efficient hydrogen production. Our approach paves the way for scalable, cost-effective solutions that couple renewable energy generation with effective wastewater treatment. Full article
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20 pages, 4790 KB  
Article
Long-Term Nitrogen Addition Regulates Plant-Soil 15N–13C Coupling Through Species Traits and Temporal-Spatial Dynamics in a Temperate Forest
by Mingxin Zhou and Yibo Li
Forests 2025, 16(7), 1046; https://doi.org/10.3390/f16071046 - 22 Jun 2025
Viewed by 399
Abstract
Nitrogen deposition is a critical driver of plant-soil interactions in forest ecosystems. However, the species-specific coordination of nitrogen uptake and carbon assimilation—traced using 15N- and 13C-labeled compounds—under varying nitrogen forms, depths, and time points remains poorly understood. We conducted a dual-isotope [...] Read more.
Nitrogen deposition is a critical driver of plant-soil interactions in forest ecosystems. However, the species-specific coordination of nitrogen uptake and carbon assimilation—traced using 15N- and 13C-labeled compounds—under varying nitrogen forms, depths, and time points remains poorly understood. We conducted a dual-isotope (15NH4Cl, K15NO3, and Na213CO3) labeling experiment in a temperate secondary forest to investigate nutrient uptake and carbon assimilation in three understory species—Carex siderosticta, Maianthemum bifolium, and Oxalis acetosella—across three nitrogen treatments (control, low N, and high N), two soil depths (0–5 cm and 5–15 cm), and two post-labeling time points (24 h and 72 h). We quantified 15N uptake and 13C assimilation in above- and belowground plant tissues, as well as 15N and 13C retention in soils. C. siderosticta exhibited the highest total 15N uptake (2.2–6.9 μg N m−2 aboveground; 1.4–4.1 μg N m−2 belowground) and 13C assimilation (58.4–111.2 mg C m−2 aboveground; 17.6–39.2 mg C m−2 belowground) under high ammonium at 72 h. High nitrogen input significantly enhanced the coupling between plant biomass and nutrient assimilation (R2 > 0.9), and increased 15N-TN and 13C-SOC retention in the surface soil layer (13,200–17,400 μg N kg−1; 30,000–44,000 μg C kg−1). Multifactorial analysis revealed significant interactions among nitrogen treatment, form, depth, and time. These findings demonstrate that ammonium-based enrichment promotes nutrient acquisition and carbon assimilation in responsive species and enhances surface soil C—N retention, highlighting the integrative effects of nitrogen form, species traits, and spatial–temporal dynamics on forest biogeochemistry. Full article
(This article belongs to the Section Forest Soil)
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