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Keywords = cold-shock vectors

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18 pages, 6010 KB  
Article
Control Method of Cold and Hot Shock Test of Sensors in Medium
by Jinming Tian, Yue Zeng, Linhai Ji, Huimin Zhu and Zu Guo
Sensors 2023, 23(14), 6536; https://doi.org/10.3390/s23146536 - 20 Jul 2023
Cited by 2 | Viewed by 1914
Abstract
In order to meet the latest requirements for sensor quality test in the industry, the sample sensor needs to be placed in the medium for the cold and hot shock test. However, the existing environmental test chamber cannot effectively control the temperature of [...] Read more.
In order to meet the latest requirements for sensor quality test in the industry, the sample sensor needs to be placed in the medium for the cold and hot shock test. However, the existing environmental test chamber cannot effectively control the temperature of the sample in the medium. This paper designs a control method based on the support vector machine (SVM) classification algorithm and K-means clustering combined with neural network correction. When testing sensors in a medium, the clustering SVM classification algorithm is used to distribute the control voltage corresponding to temperature conditions. At the same time, the neural network is used to constantly correct the temperature to reduce overshoot during the temperature-holding phase. Eventually, overheating or overcooling of the basket space indirectly controls the rapid rise or decrease in the temperature of the sensor in the medium. The test results show that this method can effectively control the temperature of the sensor in the medium to reach the target temperature within 15 min and stabilize when the target temperature is between 145 °C and −40 °C. The steady-state error is less than 0.31 °C in the high-temperature area and less than 0.39 °C in the low-temperature area, which well solves the dilemma of the current cold and hot shock test. Full article
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14 pages, 1770 KB  
Article
Effect of Banana Bunchy Top Virus on the Heat Shock Protein Genes of Pentalonia nigronervosa during Temperature Susceptibility and Its Effect on Virus Transmission
by Swati Chakraborty, Mritunjoy Barman, Snigdha Samanta, Moupiya Roy and Jayanta Tarafdar
Agronomy 2021, 11(9), 1866; https://doi.org/10.3390/agronomy11091866 - 17 Sep 2021
Cited by 7 | Viewed by 3883
Abstract
Acquisition of plant viruses is known to exert various effects on vectors’ developmental biology. Pentalonia nigronervosa is the only known vector of banana bunchy top virus (BBTV), which is an economically detrimental virus infecting banana cultivars all over the world. In the present [...] Read more.
Acquisition of plant viruses is known to exert various effects on vectors’ developmental biology. Pentalonia nigronervosa is the only known vector of banana bunchy top virus (BBTV), which is an economically detrimental virus infecting banana cultivars all over the world. In the present study, the developmental biology of viruliferous (Vr) and non-viruliferous (NVr) aphids was compared, with a marked reduction noted in the lifespan of aphids upon acquisition of BBTV. Among all the environmental parameters temperature is an important determinant of an insect’s abundance and geographical distribution. Temperature susceptibility of P. nigronervosa was scrutinized by comparing the mortality percentage and differential expression pattern of three heat shock proteins (Hsps; Hsp40, Hsp70, and Hsp90) at the mRNA level between NVr and Vr aphids. After exposure to different temperature stress (5 °C, 15 °C, 38 °C and 25 °C as control) highest mortality of Vr aphids were recorded at 5 °C. Analysis of expression levels of Hsp genes using qPCR showed that both cold and heat shock treatment stimulated higher expression of the three Hsps at various rates in Vr than NVr aphids.. Finally, the effect of temperature stress on the BBTV titer level and their transmission by P.nigronervosa was determined by absolute quantification. The transmission efficiency along with the virus titer was found to be the lowest at 15 °C compared to 38 °C. Overall, our results provide a novel insight into the intricate interaction between aphid fitness and thermal stress concerning the acquisition and transmission of BBTV, which could be a roadmap for the future epidemiological control system. Full article
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14 pages, 4112 KB  
Article
Functional Expression, Purification and Identification of Interaction Partners of PACRG
by Tiankai Liu, Haizhou Zhao, Shaofen Jian, Shu Gong, Sainan Li, Yanhong Ma, Jun Chen and Wenhua Liu
Molecules 2021, 26(8), 2308; https://doi.org/10.3390/molecules26082308 - 16 Apr 2021
Cited by 3 | Viewed by 3622
Abstract
PACRG (Parkin co-regulated gene) shares a bi-directional promoter with the Parkinson’s disease-associated gene Parkin, but the physiological roles of PACRG have not yet been fully elucidated. Recombinant expression methods are indispensable for protein structural and functional studies. In this study, the [...] Read more.
PACRG (Parkin co-regulated gene) shares a bi-directional promoter with the Parkinson’s disease-associated gene Parkin, but the physiological roles of PACRG have not yet been fully elucidated. Recombinant expression methods are indispensable for protein structural and functional studies. In this study, the coding region of PACRG was cloned to a conventional vector pQE80L, as well as two cold-shock vectors pCold II and pCold-GST, respectively. The constructs were transformed into Escherichia coli (DE3), and the target proteins were overexpressed. The results showed that the cold-shock vectors are more suitable for PACRG expression. The soluble recombinant proteins were purified with Ni2+ chelating column, glutathione S-transferase (GST) affinity chromatography and gel filtration. His6 pull down assay and LC-MS/MS were carried out for identification of PACRG-binding proteins in HEK293T cell lysates, and a total number of 74 proteins were identified as potential interaction partners of PACRG. GO (Gene ontology) enrichment analysis (FunRich) of the 74 proteins revealed multiple molecular functions and biological processes. The highest proportion of the 74 proteins functioned as transcription regulator and transcription factor activity, suggesting that PACRG may play important roles in regulation of gene transcription. Full article
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13 pages, 1419 KB  
Review
Pathogens Manipulating Tick Behavior—Through a Glass, Darkly
by Giovanni Benelli
Pathogens 2020, 9(8), 664; https://doi.org/10.3390/pathogens9080664 - 17 Aug 2020
Cited by 59 | Viewed by 14851
Abstract
Pathogens can manipulate the phenotypic traits of their hosts and vectors, maximizing their own fitness. Among the phenotypic traits that can be modified, manipulating vector behavior represents one of the most fascinating facets. How pathogens infection affects behavioral traits of key insect vectors [...] Read more.
Pathogens can manipulate the phenotypic traits of their hosts and vectors, maximizing their own fitness. Among the phenotypic traits that can be modified, manipulating vector behavior represents one of the most fascinating facets. How pathogens infection affects behavioral traits of key insect vectors has been extensively investigated. Major examples include Plasmodium, Leishmania and Trypanosoma spp. manipulating the behavior of mosquitoes, sand flies and kissing bugs, respectively. However, research on how pathogens can modify tick behavior is patchy. This review focuses on current knowledge about the behavioral changes triggered by Anaplasma, Borrelia, Babesia, Bartonella, Rickettsia and tick-borne encephalitis virus (TBEV) infection in tick vectors, analyzing their potential adaptive significance. As a general trend, being infected by Borrelia and TBEV boosts tick mobility (both questing and walking activity). Borrelia and Anaplasma infection magnifies Ixodes desiccation resistance, triggering physiological changes (Borrelia: higher fat reserves; Anaplasma: synthesis of heat shock proteins). Anaplasma infection also improves cold resistance in infected ticks through synthesis of an antifreeze glycoprotein. Being infected by Anaplasma, Borrelia and Babesia leads to increased tick survival. Borrelia, Babesia and Bartonella infection facilitates blood engorgement. In the last section, current challenges for future studies are outlined. Full article
(This article belongs to the Special Issue Animal Parasitic Diseases)
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16 pages, 2541 KB  
Article
First Whole Genome Sequence of Anaplasma platys, an Obligate Intracellular Rickettsial Pathogen of Dogs
by Alejandro Llanes and Sreekumari Rajeev
Pathogens 2020, 9(4), 277; https://doi.org/10.3390/pathogens9040277 - 10 Apr 2020
Cited by 14 | Viewed by 5074
Abstract
We have assembled the first genome draft of Anaplasma platys, an obligate intracellular rickettsia, and the only known bacterial pathogen infecting canine platelets. A. platys is a not-yet-cultivated bacterium that causes infectious cyclic canine thrombocytopenia, a potentially fatal disease in dogs. Despite [...] Read more.
We have assembled the first genome draft of Anaplasma platys, an obligate intracellular rickettsia, and the only known bacterial pathogen infecting canine platelets. A. platys is a not-yet-cultivated bacterium that causes infectious cyclic canine thrombocytopenia, a potentially fatal disease in dogs. Despite its global distribution and veterinary relevance, no genome sequence has been published so far for this pathogen. Here, we used a strategy based on metagenome assembly to generate a draft of the A. platys genome using the blood of an infected dog. The assembled draft is similar to other Anaplasma genomes in size, gene content, and synteny. Notable differences are the apparent absence of rbfA, a gene encoding a 30S ribosome-binding factor acting as a cold-shock protein, as well as two genes involved in biotin metabolism. We also observed differences associated with expanded gene families, including those encoding outer membrane proteins, a type IV secretion system, ankyrin repeat-containing proteins, and proteins with predicted intrinsically disordered regions. Several of these families have members highly divergent in sequence, likely to be associated with survival and interactions within the host and the vector. The sequence of the A. platys genome can benefit future studies regarding invasion, survival, and pathogenesis of Anaplasma species, while paving the way for the better design of treatment and prevention strategies against these neglected intracellular pathogens. Full article
(This article belongs to the Section Animal Pathogens)
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17 pages, 943 KB  
Review
Partners in Mischief: Functional Networks of Heat Shock Proteins of Plasmodium falciparum and Their Influence on Parasite Virulence
by Michael O. Daniyan, Jude M. Przyborski and Addmore Shonhai
Biomolecules 2019, 9(7), 295; https://doi.org/10.3390/biom9070295 - 23 Jul 2019
Cited by 33 | Viewed by 7247
Abstract
The survival of the human malaria parasite Plasmodium falciparum under the physiologically distinct environments associated with their development in the cold-blooded invertebrate mosquito vectors and the warm-blooded vertebrate human host requires a genome that caters to adaptability. To this end, a robust stress [...] Read more.
The survival of the human malaria parasite Plasmodium falciparum under the physiologically distinct environments associated with their development in the cold-blooded invertebrate mosquito vectors and the warm-blooded vertebrate human host requires a genome that caters to adaptability. To this end, a robust stress response system coupled to an efficient protein quality control system are essential features of the parasite. Heat shock proteins constitute the main molecular chaperone system of the cell, accounting for approximately two percent of the malaria genome. Some heat shock proteins of parasites constitute a large part (5%) of the ‘exportome’ (parasite proteins that are exported to the infected host erythrocyte) that modify the host cell, promoting its cyto-adherence. In light of their importance in protein folding and refolding, and thus the survival of the parasite, heat shock proteins of P. falciparum have been a major subject of study. Emerging evidence points to their role not only being cyto-protection of the parasite, as they are also implicated in regulating parasite virulence. In undertaking their roles, heat shock proteins operate in networks that involve not only partners of parasite origin, but also potentially functionally associate with human proteins to facilitate parasite survival and pathogenicity. This review seeks to highlight these interplays and their roles in parasite pathogenicity. We further discuss the prospects of targeting the parasite heat shock protein network towards the developments of alternative antimalarial chemotherapies. Full article
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