Search Results (36)

Fusarium wilt disease, caused by Fusarium oxysporum f. sp. cucumerinum (FOC), leads to widespread yield losses and quality deterioration in cucumber. Endophytes, as environmentally friendly control agents that enhance pathogen resistance in their host plants, may mitigate these problems. In this study, we isolated 14 endophytic bacteria from invasive Ambrosia artemisiifolia and screened the strain Bacillus subtilis TCX1, which exhibited significant antagonistic activity against FOC (inhibitory rate of 86.0%). TCX1 killed Fusarium oxysporum by being highly likely to produce lipopeptide and producing wall hydrolytic enzymes including protease, cellulase, and β-glucanase, thereby inhibiting mycelial growth and spore germination and causing peroxidation of FOC’s cytoplasmic membrane. In addition to its direct effects, TCX1 exerts indirect effects by inducing cucumber resistance to FOC. When cucumber seedlings were inoculated with TCX1, antioxidant enzymes related to disease resistance, including Superoxide dismutase (SOD), Peroxidase (POD), Polyphenol oxidase (PPO) and Phenylalanine ammonialyase (PAL) in cucumber, were significantly increased. The marker genes involved in induced systemic resistance and the salicylic acid signaling pathway, such as npr1, pr1a, pr2, pr9, lox1, and ctr1, were also dramatically upregulated, indicating these pathways played an important role in improving cucumber resistance. Notably, TCX1 can also promote cucumber growth through producing indole-3-acetic acid, solubilizing phosphate, and secreting siderophores. Given that TCX1 has dual functions as both a biological control agent and a biofertilizer, it offers an effective strategy for managing cucumber seedling blight while enhancing plant productivity. Full article

Fusarium oxysporum f. sp. cucumerium, a resilient saprophytic fungus, poses a significant risk to cucumber crops. The research investigated the suppressive impact of Bacillus velezensis dhm2 on this pathogen and the synergistic performance of its crude lipopeptide extract with synthetic fungicides. Strain dhm2 inhibited the pathogen by 52.27% in confrontation culture. Its fermentation supernatant showed peak activity at 4 h bacterial age and 60 h fermentation duration, while the crude lipopeptide extract had an EC₅₀ of 9.99 g L⁻¹. Among the six chemical fungicides, prochloraz exhibited the highest toxicity, with an EC₅₀ value of 0.03 μg mL⁻¹. In all mixed combinations of the crude lipopeptide extract and chemical fungicides, there existed synergistic mixing ratios, particularly with difenoconazole (volume ratio 7:3, synergistic ratio 5.88) and propiconazole (7:3, 3.41), as confirmed by Wadley tests. Pot experiments revealed that the combined use of the crude lipopeptide extract and difenoconazole controlled cucumber Fusarium wilt by 80.95%. The mixture showed the highest SOD (315.76 U g⁻¹ FW min⁻¹), POD (281.63 U g⁻¹ FW min⁻¹), and CAT (23.39 U g⁻¹ FW min⁻¹), with increases over single treatments. This study provides an eco-friendly strategy for managing cucumber wilt, advocating reduced fungicide use via synergistic formulations. Full article

Rootstocks are vital in cucumber production. Although figleaf gourd (Cucurbita ficifolia) is among the species used, its application remains limited due to the perception that white-seeded pumpkin (C. maxima × C. moschata) offers superior commercial traits. This perception is partly due to the insufficient collection and evaluation of local figleaf gourd germplasm, which has obscured its potential as a rootstock. Based on prior screening, four wild figleaf gourd genotypes from Yunnan Province were selected and compared with seven commercial white-seeded pumpkin rootstocks. Scions grafted onto figleaf gourd exhibited vegetative growth (stem diameter, plant height, and leaf area) and fruit morphology (length, diameter, biomass, and surface bloom) comparable to the top-performing white-seeded pumpkin genotypes. Fruits from figleaf gourd rootstocks also displayed comparable or significantly higher nutritional quality, including vitamin C, total soluble solids, soluble sugars, and proteins. Notably, figleaf gourd itself showed significantly greater intrinsic resistance to Fusarium wilt than white-seeded pumpkin. When used as a rootstock, it protected the scion from pathogen stress by triggering a stronger antioxidant response (higher SOD and POD activity) and mitigating cellular damage (lower MDA levels and electrolyte leakage). These results provide evidence that these figleaf gourd genotypes are not merely viable alternatives but are high-performing rootstocks, particularly in enhancing nutritional value and providing elite disease resistance. Full article

With continuous improvements in people’s environmental awareness, biological control agents have garnered considerable attention owing to their advantageous impacts on improving soil fertility and alleviating plant diseases. Bacillus subtilis (B. subtilis) B579, isolated from the rhizosphere soil of cucumber, has effectively suppressed the growth of pathogenic Fusarium oxysporum. Our study investigates the effects of B. subtilis B579 on the properties of the rhizosphere soil (its physicochemical properties and enzymatic activities) and microbial community of cucumber under Fusarium oxysporum infection. An amplicon sequencing analysis of the microorganisms in the rhizosphere soil was conducted, and the soil’s properties were measured. The findings demonstrated that B. subtilis B579 exhibited 73.68% efficacy in controlling cucumber Fusarium wilt disease. B579 pretreatment substantially increased the bacterial and fungi diversity and improved the soil’s physicochemical properties (pH level and OC, TN, TP, AK, and AP contents) and enzyme activities, especially those of urease and alkaline phosphatase, which exhibited significant increases of 77.22% and 64.77%, respectively, in comparison to those under the pathogen treatment. Furthermore, the utilization of B579 reduced the abundance of Fusarium while simultaneously increasing the abundance of beneficial groups, including the Bacillus, Paenibacillus, Sphingomonas, Pseudomonas, Microbacterium, Mortierella, and Trichoderma genera. The RDA showed that the abundance of Bacillus, Paenibacillus, Sphingomonas, and Mortierella in the rhizosphere showed positive correlations with most of the soil properties, whereas Fusarium abundance was negatively correlated with most of the soil’s properties. This study provides novel insights into the disease suppression mechanisms of Bacillus subtilis B579, laying the theoretical foundation for its development as a biocontrol agent. Full article

Strawberries are planted globally as an important crop. Fusarium oxysporum f. sp. fragariae (Fof), a haploid mitosporic, pathogenic fungus with obvious host specificity, is responsible for an economically devastating soil-borne disease seriously threatening strawberry. Fusarium oxysporum is distributed in soils worldwide and causes vascular wilt and root rot disease in over 100 plant species. However, the formae speciales of F. oxysporum commonly have a very narrow host range, often restricted to a single host plant species. We isolated and identified pathogenic F. oxysporum from diseased strawberry samples collected from different provinces in China. Further analysis showed that among the 55 F. oxysporum isolates, only 70.91% belonged to Fof, and the remaining 29.09% were named Fo. The mycelial growth of Fof was faster than that of Fo at 20, 30, and 35 °C. The sporulation ability of Fof was weaker than that of Fo, and Fof presented a significantly higher germination rate under high temperatures. Fof and Fo from strawberry were not pathogenic to tomato or cucumber plants, and Fof showed significantly higher pathogenicity on strawberry than Fo. To explore the pathogenic mechanism of Fof, we knocked out SIX10 in Fof. The mycelial growth rate of ΔFofSIX10 was significantly slower than that of the wild type, but there were no significant differences in spore production. The pathogenicity of ΔFofSIX10 to strawberry was significantly weakened, showing decreased severity of symptoms, indicated by root and crown rot, and wilt. Our research provides a basis for understanding the interaction between F. oxysporum and the host strawberry and the occurrence and management of Fusarium disease on strawberry. Full article

Soilborne diseases are important problems in modern agricultural production. Fusarium oxysporum f. sp. cucumerinum (FOC) is one of the predominant soilborne pathogens threatening cucumber cultivation, especially in Hainan, China. This study assessed FOC-resistant rootstocks using incidence rate, disease severity index (DSI), and area under the disease severity index curve (AUDRC), revealing “JinJiaZhen (Mc-4)” as resistant and “JinGangZhuan 1901 (Mc-18)” as susceptible. Comprehensive transcriptome and metabolome analyses were conducted to investigate the defense mechanisms of these rootstocks, revealing key pathways, such as the mitogen-activated protein kinase (MAPK) signaling pathway, starch and sucrose metabolism, and phenylpropanoid biosynthesis, which are crucial for plant disease resistance. Additionally, the study compared the resistance mechanisms of two other rootstocks, Mc-4 and Mc-18, against FOC infection through transcriptomic and metabolomic analyses. Mc-4 exhibited a higher number of differentially expressed genes (DEGs) related to phenylpropanoid biosynthesis compared to Mc-18. Untargeted metabolomics identified 4093 metabolites, with phenylpropanoid biosynthesis, isoquinoline alkaloid biosynthesis, and porphyrin metabolism as primary annotated pathways. On the sixth day post-inoculation, when the number of DEGs and differentially accumulated metabolites (DAMs) was highest, phenylpropanoid biosynthesis emerged as a key pathway in Mc-4, with 37 DEGs and 8 DAMs identified. Notably, Mc-4 showed upregulated expression of genes encoding enzymes involved in phenylpropanoid biosynthesis and increased accumulation of related metabolites, such as coniferyl-aldehyde, coniferyl alcohol, and coniferyl acetate. These findings highlight the differential defense mechanisms between resistant and sensitive rootstocks and provide insights into plant–pathogen interactions. This study’s results will contribute to the development of better and disease-free cucumber varieties, promoting sustainable agriculture. Full article

Paenibacillus polymyxa strain PJH16, isolated and tested by our team, suppresses cucumber Fusarium wilt as an efficient biocontrol agent. For further investigation, the strain has been combined with two other Bacillus strains (Bacillus velezensis VJH504 and Bacillus subtilis JNF2) to enhance biocontrol ability, which formed high-efficiency microbial agents in the current study. The methodological target taken is based on achieving the optimal growth conditions of the combined microbial agents; hence, the medium composition and culture conditions were optimized through a single-factor test, orthogonal test and response surface methodology. Following this, the effectiveness of the microbial combination was assessed through pot experiments, which provided a theoretical foundation for the synthesis of microbial flora to significantly control cucumber Fusarium wilt. The results showed excellent compatibility, proving suitable for the proliferation and growth of Paenibacillus polymyxa PJH16, Bacillus velezensis VJH504, and Bacillus subtilis JNF2 strains together, specifically, when the inoculation amounts were adjusted to 4% of each. Using the single-factor test and orthogonal test analysis, the optimum composition of culture medium for the composite strain was identified as 3% glucose as the optimal carbon source, 2% yeast extract powder as the preferred nitrogen source, and 1% dipotassium hydrogen phosphate as the most suitable inorganic salt. Furthermore, the optical density (OD₆₀₀) of the composite strain solution reached its highest level at 3.16 under the following culture conditions: inoculation volume of 200 µL, 171 rpm culture speed, 21.6 h culture time, 30 °C cultural temperature, and an initial pH of 7.0. The pot experiment demonstrated that the mixed bacterial solution achieved a relative control efficacy of 93.4% against cucumber Fusarium wilt, which was significantly superior to that of single- strain or pesticide treatment, and also promoted cucumber growth. In summary, the microbial flora synthesized by the three Bacillus strains displayed a high bacterial concentration, following the optimization of culture conditions, and exerted remarkable control and growth-promoting effects on cucumber Fusarium wilt. This finding holds great significance for future developments of composite microbial agents. Full article

Cucumber wilt disease, caused by Fusarium oxysporum f. sp. cucumerinum (FOC), is a major threat to cucumber production, especially in greenhouses. This study used a fermentation product derived from a new strain of Streptomyces rochei (G-6) to investigate the potential for biocontrol of cucumber wilt disease and the effect on promoting cucumber growth. In the first experiment, the inhibitory effect of S. rochei G-6 fermentation product (SGFP) on FOC growth was evaluated, then the effect of SGFP on wilt incidence and severity, as well as cucumber growth, antioxidant system, and soil nutrient conversion capacity were investigated. The results showed that SGFP inhibited FOC growth by 85.3% in the antimicrobial experiment. In the potting experiment, the incidence rate in the FOC group reached 88.7%, but it was only 56.0% in the SGFP1 group and 64.7% in the SGFP2 group, indicating the efficient inhibitory effect of SGFP on cucumber wilt, with the biocontrol effect of SGFP1 being higher than that of SGFP2. In addition, the disease index decreased significantly (p < 0.05) in both SGFP treatments, which was significantly (p < 0.05) lower in the SGFP1 group than in the SGFP2 group, indicating that pre-treatment was better than post-treatment in reducing the disease severity. In addition, SGFP promoted the growth of cucumber seedlings, as indicated by indicators related to the growth of aboveground and underground parts. Furthermore, the activities of antioxidant enzymes (superoxide dismutase, peroxidase, and catalase) in the cucumber seedlings increased after SGFP treatment and the malondialdehyde level was decreased, indicating a reduction in oxidative stress. SGFP also improved the soil nutrient conversion capacity by increasing the activities of urease, phosphatase, and sucrase, which may enhance nutrient uptake by cucumber seedling. The findings of this study suggest that SGFP is an effective biocontrol agent against cucumber wilt and also promotes cucumber growth by regulating the antioxidant system and soil environment, and its application is a promising solution to reduce wilt incidence in cucumber production. Full article

This study explores the biocontrol potential of Pediococcus sp. M21F004, a lactic acid bacteria (LAB) isolated from marine environments, against several bacterial and fungal phytopathogens. Out of 50 marine bacterial isolates, Pediococcus sp. M21F004 was selected for its exceptional antimicrobial activity. The strain, isolated from the intestine of a starry flounder, was identified as Pediococcus sp. Gas chromatography–mass spectrometry (GC-MS) analysis revealed that oleic acid (OA) is a key antimicrobial compound produced by Pediococcus sp. M21F004. In vitro assays showed that the culture broth (CB) of Pediococcus sp. M21F004, as well as OA, exhibited significant inhibitory effects against pathogens such as Fusarium oxysporum, Clarireedia homoeocarpa, and Pectobacterium carotovorum subsp. carotovorum. In vivo tests on cucumber Fusarium wilt, creeping bentgrass dollar spot, tomato bacterial wilt, and kimchi cabbage soft rot further demonstrated the strain’s efficacy in reducing disease severity. Moreover, OA had the highest control value of 74% against tomato bacterial wilt, followed by 64.1% against cucumber fusarium wilt, 42.5% against kimchi cabbage soft rot, and 16.5% against creeping bentgrass dollar spot. These findings suggest that Pediococcus sp. M21F004 and its metabolite OA offer promising alternatives to chemical pesticides, contributing to sustainable plant disease management by promoting resistance induction and providing an eco-friendly approach to agriculture. Full article

Cucumber wilt, caused by Fusarium oxysporum f. sp. cucumerinum (FOC), is a soilborne disease that poses a significant threat to cucumber production, resulting in substantial yield losses. This study aimed to evaluate the biocontrol and growth-promoting effects of Bacillus velezensis, a highly active bacterial strain. In vitro assays revealed that B. velezensis F9 exhibited broad-spectrum antifungal activity against eight plant pathogenic fungi, with inhibition ratio ranging from 62.66% to 88.18%. Additionally, the strain displayed the ability to produce IAA (5.97 ± 1.75 µg/mL), fix nitrogen, produce siderophores, and form biofilms. In vitro growth promotion assays demonstrated that different concentrations of B. velezensis F9 significantly promoted cucumber seedling growth. Furthermore, two pot experiments revealed that the strain exhibited biocontrol efficacy against cucumber wilt, with disease control rates ranging from 42.86% to 67.78%. Notably, the strain significantly increased the plant height, fresh weight, and dry weight, with increases ranging from 20.67% to 60.04%, 40.27% to 75.51%, and 22.07% to 52.54%, respectively. Two field trials confirmed the efficacy of B. velezensis F9 in controlling cucumber wilt, with disease control rates of 44.95% and 33.99%, respectively. The strain effectively alleviated the dwarfing and wilting symptoms caused by the pathogen. Compared with the FOC treatment, the F9 + FOC treatment significantly increased the plant height, fresh weight, and dry weight, with increases of 43.85% and 56.28%, 49.49% and 23.70%, and 36.25% and 73.63%, respectively. Enzyme activity assays indicated that inoculation significantly increased SOD activity in cucumber leaves and neutral phosphatase, sucrase, and urease activity in rhizosphere soil. Correlation analysis revealed a negative correlation between the disease index and plant height, fresh weight, dry weight, and peroxidase activity, with correlation coefficients of −0.53, −0.60, −0.38, and −0.45, respectively. These findings suggest that plant height, fresh weight, and dry weight are significantly negatively correlated with the cucumber disease index, highlighting their importance as indicators for evaluating the biocontrol efficacy of B. velezensis F9. In conclusion, B. velezensis F9 is a highly effective plant growth-promoting rhizobacterium with excellent biocontrol potential, showcasing promising applications in agricultural production. Full article

Cucumber is one of the top ten vegetables globally and is widely cultivated worldwide. However, Fusarium wilt, caused by Fusarium oxysporum f. sp. Cucumerinum, is one of the most serious soil-borne diseases in cucumber cultivation, causing significant economic losses. Biological control has great potential in the prevention of cucumber wilt disease, but the mechanism involved still needs further research. In this study, biocontrol isolate Bacillus subtilis 1JN2, which was isolated in our previous work, was evaluated in field conditions against Fusarium wilt, and the rhizosphere fungal diversity was analyzed. The results indicated that the biocontrol efficacy of B. subtilis 1JN2 reached 58.5% compared with the blank control, and the population density of F. oxysporum in the rhizosphere decreased from 495 copies/g of soil before inoculation to 20 copies/g 14 days after treatment. High-throughput sequencing demonstrated that after an inoculation of 1JN2, the populations that decreased significantly include the genera of Olpidium and Pseudallescheria, from more than 20% to less than 8%. And the most increased population belonged to the family Chaetomiaceae, from 6.82% to 18.77%, 12.39%, 44.41%, and 19.41% at the four sample time points after treatment. In addition, soil-related enzyme activities, including catalase, soil dehydrogenase, alkaline phosphatase, and polyphenol oxidase, were analyzed before and after treatment with 1JN2. The results indicated that all the enzyme activities showed an upward trend following inoculation. These findings demonstrate the potential of using B. subtilis 1JN2 as a biocontrol agent for controlling Fusarium wilt in cucumber. Full article

Ginkgo biloba is abundant in secondary metabolites, including flavonoids and terpenoids. While the majority of research has focused on the role of these compounds in disease resistance, their specific contribution to pathogen defense has been rarely explored. In this study, we collected root exudates from hydroponically cultivated ginkgo seedlings and conducted a metabolomic analysis. We identified several primary metabolites mainly comprising amino acids and nucleotides, while secondary metabolites consisted of various compounds, including bioactive compounds such as flavonoids and terpenoids. Focusing on the secondary metabolites with relatively higher abundance in the exudates, we selected a mixture of flavonoids and terpenoids for in vitro inhibition experiments against two soil-borne fungal pathogens, Fusarium oxysporum f. sp. cucumerinum that causes cucumber wilt and Rhizoctonia solani AG-8 that causes wheat root rot. The results indicated that the growth rate of both fungus cells was significantly reduced with the increasing concentration of the flavonoid and terpenoid mixture extracted from ginkgo and was completely inhibited at a concentration of 5 mg/mL. Further experiments revealed that this mixture of flavonoids and terpenoids had a destructive effect on the cellular structure of both fungi, thereby reducing cell viability and achieving an antifungal effect. These findings provide a foundation for further research into the use of ginkgo extracts in biological control. Full article

This study aims to evaluate the biocontrol potential of Meyerozyma guilliermondii (CECT13190), an endophytic yeast, and its role in mitigating the adverse effects of abiotic and biotic stress in cucumber plants. The relevance of this study lies in addressing the threat of Fusarium wilt, a major fungal disease that impacts cucumber crop productivity, as well as the exacerbation of food scarcity caused by climate change-induced abiotic stress factors such as high temperatures and drought. The study was conducted in a greenhouse environment where Cucumis sativus seedlings were exposed to biotic (F. oxysporum inoculation) and abiotic stress conditions (heat and water deficit). The impact of M. guilliermondii on treated plants’ physiology, growth, development, and flowering was assessed. The study confirmed the biocontrol activity of M. guilliermondii against F. oxysporum and highlighted its positive effects as a plant growth promoter. It enhanced overall plant health, activated natural defense mechanisms against F. oxysporum, and alleviated the detrimental impacts of abiotic stress. Notably, M. guilliermondii also induced early flowering in cucumber plants. This research underscores the potential of M. guilliermondii as a biocontrol agent for managing Fusarium wilt, enhancing stress tolerance, promoting early flowering, and offering promising prospects for sustainable crop production amidst fungal diseases and climate change-induced stressors. The findings emphasize the importance of utilizing M. guilliermondii to improve cucumber crop productivity and address food scarcity challenges. Full article

Efficient and sustainable food production is crucial in global agricultural development. Overuse of chemical fertilizers leads to soil acidification, destruction of soil properties, and harm to soil micro-organisms. Plant growth-promoting rhizobacteria (PGPR) have emerged as a solution, enhancing soil fertility and crop yields while reducing chemical fertilizer dependency and disease occurrence. In this study, Bacillus strains KHC2, KHH5, and KHH13, isolated from organic rice field soils in Taiwan, were identified through molecular techniques as B. velezensis (KHC2, KHH13) and B. amyloliquefaciens (KHH5). The strains exhibited various hydrolytic enzymes (including protease, cellulase, amylase, and lecithinase), with KHH13 showing the highest phosphate solubilization (2186.1 µg mL⁻¹ day⁻¹) and indole-3-acetic acid (IAA) production (63.067 ± 0.595 ppm mL⁻¹). These properties indicate KHH13’s potential as a bio-enhancer for plant growth. Therefore, we hypothesized that KHH13 can enhance plant growth and control soil-borne diseases. A greenhouse experiment demonstrated that KHH13, KHC2, and KHH5 effectively promoted the growth of red lettuce, with KHH13 showing superior efficacy. The study also found KHH13’s treatment enhanced the growth of various vegetables, including tomato, cucumber, and red lettuce. In terms of disease control, KHH13 significantly reduced Fusarium wilt in cucumbers, as evidenced by the reduction in disease index from 74.33% to 41.67% after KHH13 treatment. The treatment group displayed better plant growth, including plant height and fresh weight, compared to the control group in the greenhouse experiment. Furthermore, oral and pulmonary acute toxicity analysis in rats showed no adverse effects on rat weight or mortality, indicating KHH13’s safety for mammalian use. These findings suggest B. velezensis KHH13 as a safe, effective, and sustainable biological agent for enhancing vegetable growth and controlling soil-borne diseases, with potential applications in sustainable agriculture. Full article

The FKBP (FK506-binding protein) gene family is an important member of the PPlase protease family and plays a vital role during the processes of plant growth and development. However, no studies of the FKBP gene family have been reported in cucumber. In this study, 19 FKBP genes were identified in cucumber, which were located on chromosomes 1, 3, 4, 6, and 7. Phylogenetic analysis divided the cucumber FKBP genes into three subgroups. The FKBP genes in the same subgroup exhibited similar structures and conserved motifs. The cis-acting elements analysis revealed that the promoters of cucumber FKBP genes contained hormone-, stress-, and development-related cis-acting elements. Synteny analysis of the FKBP genes among cucumber, Arabidopsis, and rice showed that 12 kinds of syntenic relationships were detected between cucumber and Arabidopsis FKBP genes, and 3 kinds of syntenic relationships were observed between cucumber and rice FKBP genes. The tissue-specific expression analysis showed that some FKBP genes were expressed in all tissues, while others were only highly expressed in part of the 10 types of tissues. The expression profile analysis of cucumber FKBP genes under 13 types of stresses showed that the CsaV3_1G007080 gene was differentially expressed under abiotic stresses (high temperature, NaCl, silicon, and photoperiod) and biotic stresses (downy mildew, green mottle mosaic virus, Fusarium wilt, phytophthora capsica, angular leaf spot, and root-knot nematode), which indicated that the CsaV3_1G007080 gene plays an important role in the growth and development of cucumber. The interaction protein analysis showed that most of the proteins in the FKBP gene family interacted with each other. The results of this study will lay the foundation for further research on the molecular biological functions of the cucumber FKBP gene family. Full article