Search Results (2,105)

The poultry industry, a globally fast growing agricultural sector, provides affordable animal protein due to high efficiency. Gallus gallus domesticus are the most common domestic birds. Hybrid chicken breeds (crosses) are widely used to achieve high productivity. Maintaining industry competitiveness requires constant genetic selection of parent stock to improve performance traits. Genetic studies, which are essential in modern breeding programs, help identify genome variants linked to economically important traits and preserve population health. Next-generation sequencing (NGS) has identified millions of single nucleotide polymorphisms (SNPs) and insertions/deletions (INDELs), enabling detection of genome-wide regions associated with selection traits. Recent studies have pinpointed such regions using broiler lines, laying hen lines, or pooled genomic data. This review discusses advances in chicken genomic and transcriptomic research focused on traits enhancing meat breed performance and reproductive abilities. Special attention is given to transcriptome studies revealing regulatory mechanisms and key signaling pathways involved in artificial molting, as well as metagenome studies investigating resistance to infectious diseases and climate adaptation. Finally, a dedicated section highlights CRISPR/Cas genomic editing techniques for targeted genome modification in chicken genomics. Full article

Emerging infectious diseases, particularly those of zoonotic origin, often originating from wildlife reservoirs represent a growing threat to global health. Human-driven environmental changes such as habitat fragmentation, climate change, and urban expansion have intensified interactions at the wildlife–domestic animal–human interface, facilitating cross-species viral transmission. Despite their epidemiological importance, systematic virological surveillance of wildlife remains challenging. In this study, we employed shotgun metagenomic sequencing to characterize the virome of wild animals rescued in the Pisa area and hospitalized at the “Mario Modenato” Veterinary Teaching Hospital (VTH) at the University of Pisa. Fecal samples collected from injured wildlife admitted between September 2020 and September 2021 were analyzed to detect both known and novel viruses. This approach builds upon previous PCR-based investigations of the same biological material, enabling a more comprehensive assessment of viral diversity. We adopted a shotgun approach for analyzing six sample pools—four were positive for at least one viral target—identifying diverse viral families, including Astroviridae, Circoviridae, Picornaviridae, Adenoviridae, and Retroviridae, in asymptomatic wildlife admitted to a veterinary hospital, highlighting their potential role as reservoirs. Our findings provide insights into the influence of environmental and anthropogenic factors on wildlife virome composition and highlight the value of hospital-based sampling strategies for urban viral surveillance. The results contribute to the development of integrated monitoring and prevention strategies within a One Health framework. Full article

Wild carnivores can harbor pathogens affecting wildlife conservation and domestic animal health. This study surveyed major viral pathogens in free-ranging wolves, red foxes, stone martens, and Eurasian badgers in Northwestern Italy. Duodenal samples from 140 carcasses were screened by consensus PCR for members of the species Protoparvovirus carnivoran1 and for canine adenoviruses (CAdV-1/2). PCR-positive samples underwent sequence-independent amplification and Oxford Nanopore sequencing. Canine parvovirus type 2 (CPV-2) and feline panleukopenia virus (FPV) DNAs were identified in three wolves (6.4%) and one badger (4.3%), whereas CAdV-1 was detected in one red fox (1.8%). Nanopore sequencing yielded near-complete genomes of two CPV-new 2a, one CPV-2c, and one FPV strains, along with partial CAdV-1 sequences. Furthermore, the complete genome of a canine circovirus (CaCV) strain in co-infection with a CPV-2c-positive wolf and partial sequences of a canine kobuvirus (CaKoV) strain were also obtained. Phylogenetic analysis placed these viruses within known European lineages and linked them to domestic and wild hosts. These findings revealed the circulation of multiple viral pathogens among wild carnivores, reflecting ongoing cross-species spillover. Continuing molecular surveillance at the wildlife–domestic interface is recommended. Full article

Murder-suicide, also referred to as homicide-suicide, results in multiple casualties. The victims are typically human, and cases involving the inclusion of pets, sometimes termed “murder-suicide-peticide”, have been rarely reported worldwide. The aim of this study is to present and examine the characteristics of three forensic veterinary cases in which pets were found dead alongside human victims in suspected domestic murder-suicide incidents in Japan. We analyzed information provided by the police agency about the owners, families, and the animals, as well as necropsy findings of three cases. In all three cases, it was determined that both the human and animal victims died from the same cause, suggesting a tendency for perpetrators to kill pets using the same methods as those used on human victims. Murder-suicide is regarded as the most extreme form of domestic violence and abuse. Ongoing interdisciplinary research is essential for developing effective intervention strategies to protect vulnerable individuals, both human and non-human, within the household. Full article

Background: Corynebacterium ulcerans is an emerging zoonotic pathogen capable of cau-sing diphtheria-like infections in humans. Objectives: we report, for the first time in Brazil, the detection and phenotypic/genomic characterization of three atoxigenic ST-339 strains isolated from domestic animals, including one with a ciprofloxacin resistance profile linked to double GyrA mutations (S89L, D93G). Methods: species identification was performed by MALDI-TOF MS, followed by in vitro antimicrobial susceptibility testing, whole-genome sequencing, and bioinformatic analyses to predict virulence determinants, antimicrobial resistance genes, CRISPR–Cas systems, mobile genetic elements, and in silico structural analysis as well as phylogenetic reconstruction. Results: whole-genome sequencing confirmed species identity, revealed high genetic similarity, and identified distinct phylogenetic subclades, suggesting potential international dissemination. Genomic analyses showed conserved virulence determinants, such as incomplete pilus clusters, iron acquisition systems, and the pld gene, with the absence of the tox gene. Molecular modeling and dynamics simulations indicated that GyrA mutations disrupt critical ciprofloxacin–magnesium–water interactions, reducing binding stability. Mobile genetic elements, prophages, and CRISPR–Cas systems underscored the genomic plasticity of these isolates. Conclusions: these findings document a little-studied antimicrobial resistance mechanism in zoonotic C. ulcerans, highlighting the need for strengthened surveillance and further research on virulence and resistance, even in ato-xigenic strains. Full article

Oxytocin (OT) has emerged as a central focus in stress regulation and animal welfare research. While commonly measured in blood, saliva, and urine, its presence in feces remains unexplored. Fecal OT (fOT) could be highly valuable for wildlife studies, where direct handling is impractical. This study explored OT detection in feces using lions (Panthera leo) as a model species. The objectives included developing a reliable fOT extraction protocol, describing baseline fOT patterns in captive lions, and evaluating its relationship with fecal glucocorticoid metabolites (fGM) under non-stressful conditions. Fecal samples from 16 lions in stable social groups across five Spanish zoos were collected over two to six weeks. A methanol-based extraction and commercial enzyme immunoassay were successfully validated for fOT quantification. Concentrations ranged from 3.00 to 296.64 ng OT/g of feces, with notable intra- and inter-individual variability. Age, sex, and contraceptive status had no significant influence on fOT (p > 0.05), but concentrations differed significantly between zoos (p < 0.001). No consistent relationship was found between fOT and fGM levels under baseline conditions. This study is the first to demonstrate OT detection in feces. The validated methodology provides a foundation for investigating fOT as a biomarker of stress and welfare in wild and domestic species. Full article

Bartonella spp. is a Gram-negative bacterium transmitted by arthropod vectors, implicated in a range of zoonotic infections affecting both humans and animals. Among zoonotic species, B. henselae is primarily associated with domestic cats and B. vinsonii with dogs. In Italy, Bartonella infections have been reported in both southern and northern regions. This study investigates the presence of Bartonella spp. in fleas and ticks collected from companion animals in Piedmont region, northwestern Italy. A total of 176 flea and 85 tick specimens were obtained from 92 animals (dogs and cats) between May 2018 and February 2020. Arthropods were morphologically identified using identification keys, and screened for Bartonella DNA by PCR targeting the 16s rRNA gene. Positive samples were further analyzed by amplifying the rpoB gene. Selected 16s-positive and all rpoB-positive samples were sequenced and subjected to phylogenetic analysis. Fleas were mostly identified as Ctenocephalides felis, recovered from 44 cats and 12 dogs; a single C. canis specimen was found in one cat. Ticks were Ixodes ricinus (from 14 cats and 10 dogs), Rhipicephalus sanguineus s.l. (3 cats, 7 dogs), and Dermacentor marginatus (one dog). Bartonella prevalence was 38.4%, with 34.2% positivity in fleas and 45.6% in ticks. All sequences corresponded to B. henselae. These findings confirm the active circulation of B. henselae in ectoparasites of pets and raise questions about the potential role of ticks in its transmission. Full article

Brazilian porcupinepox virus (BPoPV) is a recently described pathogen associated with severe cutaneous and systemic disease in Coendou spp. porcupines, posing potential conservation and zoonotic risks. Given the solitary behavior of porcupines and the unclear mechanisms of BPoPV transmission, this study investigated the presence of BPoPV DNA in porcupines and their associated ectoparasites (ticks and lice). We analyzed ticks and lice collected from 17 porcupines (C. longicaudatus and C. spinosus), with or without clinical signs of BPoPV infection. Ectoparasites were identified morphologically, separated into distinct pools for ticks and lice by host, and screened by PCR. BPoPV DNA was detected in all symptomatic porcupines and their ectoparasites—including Amblyomma longirostre, A. sculptum ticks, and Eutrichophilus spp. lice—except for one tick pool. Notably, an asymptomatic, BPoPV-negative porcupine harbored A. longirostre ticks that tested positive for the virus. Sequencing confirmed 100% identity with the BPoPV reference strain. These findings suggest that Eutrichophilus lice, A. sculptum, and particularly A. longirostre ticks may play a role in BPoPV transmission. Further studies are needed to elucidate whether these ectoparasites act as biological or mechanical vectors and to assess the zoonotic potential of BPoPV in contact with humans and domestic animals. Full article

Migratory birds play a key role in the ecology of tick-borne pathogens, serving as both hosts for ticks and as potential carriers of a wide range of infectious agents that can affect wildlife, domestic animals, and humans. Their long-distance movements contribute to the dispersal of ticks and the pathogens they harbor, with potential implications for the emergence and spread of zoonotic disease. This study focuses on the prevalence of Rickettsia spp. and Babesia/Theileria spp. in ticks collected from migratory birds in Sardinia, Italy, during two consecutive migration seasons (April–May and October–November 2021), corresponding to the spring and autumn migratory periods. A total of 961 ticks, primarily Ixodes ricinus, was collected from various bird species. Molecular analyses using polymerase chain reaction (PCR) and sequencing enabled the detection and identification of multiple Rickettsia species, with R. helvetica, R. monacensis, and R. aeschlimannii being the most frequently identified. Protozoan pathogens, including B. venatorum and Theileria ovis, were also detected in the tick samples. These findings underscore the diversity of pathogens in bird-associated ticks and the role of migratory birds in the geographical spread of these diseases. These results also provide valuable insights into pathogen transmission dynamics and stress the importance of monitoring migratory birds to assess and mitigate the risks of zoonotic diseases. Further research is needed to clarify the ecological interactions among birds, ticks, and pathogens across different geographic regions. Full article

This paper investigates whether carbon payments are sufficient to entice private landholders to invest in the rehabilitation and protection of coastal wetlands as a nature-based climate solution. Ecologically intact coastal wetlands, such as mangroves and saltmarshes, are capable of sequestering and storing large amounts of carbon. Reinstating ecological functionality of degraded coastal wetlands may be achieved by installing conservation fences that exclude hard-hoofed domestic and feral animals. This research integrates ecological, technical and economic data to ascertain whether conservation fencing could represent a financially viable investment for coastal landholders in the Australian context, if restored wetlands attracted carbon payments. Data gleaned through literature review and expert interviews about technical fencing requirements, contemporary costs and potential blue carbon income are consolidated into scenarios and tested using cost–benefit analysis. Payback periods are calculated using deterministic parameters. Risk-based cost–benefit analysis accounts for uncertainty of ecological and price parameters; it provides probability distributions of benefit–cost ratios assuming an expert-agreed economic lifespan of conservation fences. The results demonstrate that the payback period and benefit–cost ratio are highly sensitive to wetlands’ carbon sequestration capacity, fencing costs and the carbon price going forward. In general, carbon payments on their own are likely insufficient to entice private landholders to protect coastal wetlands through conservation fencing, except in circumstances where restored wetlands achieve high additional carbon sequestration rates. Policy measures that reduce up-front costs and risk and remuneration of multiple ecosystem services provided by restored wetlands are required to upscale blue carbon solutions using conservation fencing. The research findings bear relevance for other conservation and land-use contexts that use fencing to achieve sustainability goals and generate payments for ecosystem services. Full article

Due to the growing environmental burden of endocrine-disrupting chemicals (EDCs), there is an increasing concern regarding the reproductive hazards posed by synthetic estrogens, particularly diethylstilbestrol (DES). However, the precise mechanisms by which DES disrupts uterine endocrine function and immune homeostasis leading to pregnancy failure remain unclear. Given that wild rodents serve as key reservoirs for zoonotic diseases such as plague, reproductive interventions targeting their pregnancy processes hold significant ecological implications for disease control. In this study, female mice in estrus were randomly divided into four experimental groups, receiving DES at doses of 0 (control), 0.02 (low), 0.2 (medium), and 2 mg/kg (high), respectively. For five consecutive days, mice were injected subcutaneously on a daily basis, with the goal of examining DES-related alterations in hormone secretion and local immune responses within the uterus and spleen. It was found that high-dose DES treatment significantly increased maternal body weight and spleen weight during early pregnancy (p < 0.05). Meanwhile, reproductive function declined progressively with increasing doses, as indicated by decreased ovarian and uterine weights, fewer embryos, and extended estrous cycle duration (p < 0.05). Hematoxylin and eosin staining revealed that high-dose DES markedly reduced uterine gland density at day P5, accompanied by epithelial vacuolar degeneration and nuclear pyknosis. The proportion of uterine glands relative to total uterine area also decreased significantly with increasing DES doses. Moreover, DES inhibited lymphocyte proliferation in both the uterus and spleen in a dose-dependent fashion, with ConA- and LPS-induced proliferation rates decreasing by 0.78–30.70% and 1.91–18.20%, respectively (p < 0.05). The proinflammatory cytokine IL-2 was significantly elevated by DES, whereas the anti-inflammatory cytokine IL-4 showed a notable decrease (p < 0.05). DES administration notably decreased uterine expression of proliferating cell nuclear antigen. In contrast, the numbers of B-cell lymphoma 2- and Bcl-2-associated X protein-positive cells rose, along with upregulated levels of inducible nitric oxide synthase. Furthermore, DES impaired antioxidant defenses in both the uterus and spleen, evidenced by the decreased activities of superoxide dismutase and glutathione peroxidase, reduced total antioxidant capacity, and elevated malondialdehyde levels. This study elucidates the multifaceted mechanisms by which DES impairs the early gestational reproductive environment, filling a critical knowledge gap regarding its interference with the uterus–immune axis, and expands the current understanding of the ecotoxicological impacts of endocrine-disrupting chemicals. Full article

This review synthesizes advances in livestock genomics by examining the interplay between candidate genes, molecular markers (MMs), signatures of selection (SSs), and quantitative trait loci (QTLs) in shaping economically vital traits across livestock species. By integrating advances in genomics, bioinformatics, and precision breeding, the study elucidates genetic mechanisms underlying productivity, reproduction, meat quality, milk yield, fibre characteristics, disease resistance, and climate resilience traits pivotal to meeting the projected 70% surge in global animal product demand by 2050. A critical synthesis of 1455 peer-reviewed studies reveals that targeted genetic markers (e.g., SNPs, Indels) and QTL regions (e.g., IGF2 for muscle development, DGAT1 for milk composition) enable precise selection for superior phenotypes. SSs, identified through genome-wide scans and haplotype-based analyses, provide insights into domestication history, adaptive evolution, and breed-specific traits, such as heat tolerance in tropical cattle or parasite resistance in sheep. Functional candidate genes, including leptin (LEP) for feed efficiency and myostatin (MSTN) for double-muscling, are highlighted as drivers of genetic gain in breeding programs. The review underscores the transformative role of high-throughput sequencing, genome-wide association studies (GWASs), and CRISPR-based editing in accelerating trait discovery and validation. However, challenges persist, such as gene interactions, genotype–environment interactions, and ethical concerns over genetic diversity loss. By advocating for a multidisciplinary framework that merges genomic data with phenomics, metabolomics, and advanced biostatistics, this work serves as a guide for researchers, breeders, and policymakers. For example, incorporating DGAT1 markers into dairy cattle programs could elevate milk fat content by 15-20%, directly improving farm profitability. The current analysis underscores the need to harmonize high-yield breeding with ethical practices, such as conserving heat-tolerant cattle breeds, like Sahiwal. Full article

Leishmaniasis, a vector-borne neglected tropical disease, affects over 6.2 million people globally. Case acquisition is increasingly recognized in the United States, and in Texas, most reported cases are locally acquired and speciated to Leishmania mexicana. We conducted a scoping literature review to systematically assess contemporary research on Leishmania in humans, animals, reservoir hosts, or vectors in Texas after 2000. Out of 22 eligible studies, the most prevalent themes were case reports, followed by studies on domestic animals, reservoirs, and vectors, with several studies bridging multiple disciplines. Climate change, urbanization, and habitat encroachment appear to be driving the northward expansion of L. mexicana, which is primarily attributed to shifts in the habitats of key vectors (Lutzomyia anthophora) and reservoirs (Neotoma spp.). Leishmania appears to be expanding into new areas, with potential for further spread. As ecological conditions evolve, strengthening surveillance and clinician awareness is crucial to understanding disease risk and improving early detection and treatment in affected communities. Full article

Behavioral issues in domestic dogs represent a significant welfare concern affecting both canines and their caregivers, with prevalence rates reported to range from 34 to 86% across the population. Current treatment options, including selective serotonin reuptake inhibitors (SSRIs) like fluoxetine, often present limitations including adverse effects and delayed efficacy. This randomized, placebo-controlled (maltodextrin) study investigated the effects of a novel Lactiplantibacillus plantarum strain (LP815^TM) on canine behavioral concerns through gut–brain axis modulation. Home-based dogs (n = 40) received either LP815^TM (n = 28) or placebo (n = 12) daily for 4 weeks, with behavioral changes assessed using the comprehensive Canine Behavioral Assessment & Research Questionnaire (C-BARQ) and continuous activity monitoring. After the intervention period, dogs receiving LP815^TM showed significant improvements in aggression (p = 0.0047) and anxiety (p = 0.0005) compared to placebo controls. These findings were corroborated by objective activity data, which demonstrated faster post-departure settling, reduced daytime sleep, and improved sleep consistency in the treatment group. Throughout >1120 administered doses, no significant adverse events were reported, contrasting favorably with pharmaceutical alternatives. The concordance between our findings and previous research using different L. plantarum strains suggests a consistent biological mechanism, potentially involving GABA production and vagal nerve stimulation. These results indicate that LP815^TM represents a promising, safe alternative for addressing common canine behavioral concerns with potential implications for improving both canine welfare and the human–animal bond. Full article

Rickettsia, Anaplasma, and Ehrlichia species are emerging tick-borne pathogens that cause zoonotic diseases, including rickettsiosis, anaplasmosis, and ehrlichiosis in both human and animal populations. This study aimed to investigate the prevalence of these pathogens in cattle-associated ticks from Ganzhou City, Jiangxi Province, China. Through molecular characterization using multilocus sequence analysis (16S rRNA, gltA, groEL, and ompA genes), we analyzed 392 Rhipicephalus microplus ticks collected from March to September in 2022. The PCR results showed that eight Rickettsiales bacteria were detected, including two species of Rickettsia (51/392, 13.0%), four species of Anaplasma (52/392, 13.3%), and two species of Ehrlichia (70/392, 17.9%). Notably, the circulation of multiple pathogen species within R. microplus populations demonstrates significant microbial diversity in this region. Further consideration and investigation should be given to the possible occurrence of rickettsiosis, ehrlichiosis, and anaplasmosis in humans and domestic animals. Our study provides critical baseline data for developing targeted surveillance strategies and informing public health interventions against tick-borne diseases in southeastern China. Full article