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22 pages, 5742 KB  
Article
Anther Ontogeny and Pollen Development in Southern Highbush Blueberry (Vaccinium corymbosum L.)
by José María Recalde, Miguel Fernando Garavello, Paula Alayón Luaces and Ana María González
Horticulturae 2025, 11(11), 1278; https://doi.org/10.3390/horticulturae11111278 - 24 Oct 2025
Viewed by 548
Abstract
Southern highbush blueberry (SHB, Vaccinium corymbosum, Ericaceae) enables production in warm, low-chill regions, where breeding success depends on precisely timed pollinations. To support breeding in non-traditional environments, we characterized floral staging, anther wall ontogeny, tubule formation, and pollen development in two SHB [...] Read more.
Southern highbush blueberry (SHB, Vaccinium corymbosum, Ericaceae) enables production in warm, low-chill regions, where breeding success depends on precisely timed pollinations. To support breeding in non-traditional environments, we characterized floral staging, anther wall ontogeny, tubule formation, and pollen development in two SHB cultivars (‘Emerald’, ‘Snowchaser’) grown in commercial orchards. Floral development was divided into seven stages: dormant buds (db), five successive floral-bud stages (botA–botE), and anthesis, based on bud size, corolla exposure and pigmentation, and anther/tubule coloration. Internal events were documented by light, confocal, and scanning electron microscopy. External cues reliably separated stages and tracked male-gametophyte phases: meiosis at botB; callose-encased tetrads at botC; permanent tetrahedral tetrads after callose dissolution at botD; bicellular tetrads from botE to anthesis, released intact via poricidal dehiscence. Anther-wall differentiation followed a consistent sequence and lacked a fibrous, lignified endothecium. We therefore propose a new Ericaceous pattern for blueberry anthers, defined by a transient non-lignified subepidermal stratum. Tubules originated apically as solid outgrowths, hollowed centrifugally to a beveled pore, developed a dorsal supportive zone, and mediated poricidal release of permanent tetrads. No qualitative cultivar differences were detected. The staging framework defines operational windows for pollination, emasculation, and pollen handling in low-chill systems. Full article
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16 pages, 1199 KB  
Article
Peach Buds’ Microbiome Profiling Reveals Cultivar-Specific Signatures Associated with TCSB Susceptibility
by Antonella Cardacino, Taner Tastekin, Federico Brugneti, Marco Cirilli, Angelo Mazzaglia and Silvia Turco
Stresses 2025, 5(3), 60; https://doi.org/10.3390/stresses5030060 - 19 Sep 2025
Cited by 1 | Viewed by 673
Abstract
The plant microbiome plays a pivotal role in host development and resilience against biotic and abiotic stresses. In perennial crops like peach, microbial communities inhabiting dormant buds—critical yet vulnerable organs—may influence disease outcomes and plant fitness. This study characterized the bacterial and fungal [...] Read more.
The plant microbiome plays a pivotal role in host development and resilience against biotic and abiotic stresses. In perennial crops like peach, microbial communities inhabiting dormant buds—critical yet vulnerable organs—may influence disease outcomes and plant fitness. This study characterized the bacterial and fungal communities associated with the buds of three peach cultivars differing in susceptibility to Twig Canker and Shoot Blight (TCSB). Amplicon-based profiling revealed distinct microbiome signatures across cultivars, shaped by host genotype. The highly tolerant ‘Catherina’ harbored a structured and relatively diverse community enriched in beneficial bacterial genera such as Pseudomonas, Sphingomonas, and Curtobacterium, alongside protective yeasts including Aureobasidium and Cladosporium. In contrast, the susceptible cultivar ‘Pavoro®-Pav 1605’ hosted a less balanced microbiome, marked by enrichment of opportunistic pathogens such as Alternaria and Diaporthe, as well as the bacterial lineage 1174-901-12. The intermediate cultivar ‘Lami®.COM’ displayed a transitional profile enriched in Sphingomonas, Pelomonas, and Vishniacozyma. Differential abundance analyses confirmed cultivar-specific enrichment patterns, underscoring the influence of genotype in shaping microbiota composition and potential disease outcomes. These findings support the integration of microbiome-based approaches into sustainable disease management via beneficial microbial promotion, early detection of harmful consortia, and microbiome-informed breeding to foster resilient, low-input peach cultivation systems. Full article
(This article belongs to the Collection Feature Papers in Plant and Photoautotrophic Stresses)
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19 pages, 2421 KB  
Article
Genome-Wide Identification of the Dendrocalamus latiflorus IDD Gene Family and Its Functional Role in Bamboo Shoot Development
by Yu-Han Lin, Peng-Kai Zhu, Mei-Yin Zeng, Xin-Ru Gao, Tian-You He, Jun-Dong Rong, Yu-Shan Zheng and Ling-Yan Chen
Genes 2025, 16(9), 1036; https://doi.org/10.3390/genes16091036 - 30 Aug 2025
Viewed by 751
Abstract
Background: Transcription factors (TFs) critically regulate gene expression, orchestrating plant growth, development, and stress responses. The conserved IDD (INDETERMINATE DOMAIN) TF family modulates key developmental processes, including root, stem, and seed morphogenesis. Dendrocalamus latiflorus Munro, an economically vital sympodial bamboo [...] Read more.
Background: Transcription factors (TFs) critically regulate gene expression, orchestrating plant growth, development, and stress responses. The conserved IDD (INDETERMINATE DOMAIN) TF family modulates key developmental processes, including root, stem, and seed morphogenesis. Dendrocalamus latiflorus Munro, an economically vital sympodial bamboo in southern China, suffers significant yield losses due to prevalent bamboo shoot abortion, impacting both edible shoot production and timber output. Despite the documented roles of IDD TFs in shoot apical meristem expression and lateral organ regulation, their genome-wide characterization in D. latiflorus remains unstudied. Methods: Using IDD members from Arabidopsis thaliana, Oryza sativa, and Phyllostachys edulis as references, we identified 45 DlIDD genes in D. latiflorus. Comprehensive bioinformatics analyses included gene characterization, protein physicochemical assessment, phylogenetic reconstruction, and examination of gene structures/conserved domains. Differential expression of DlIDD genes was profiled between dormant and sprouting bamboo shoots to infer putative functions. Results: The 45 DlIDD genes were phylogenetically classified into three subfamilies and unevenly distributed across 34 chromosomes. Whole-genome duplication (WGD) events drove the expansion of this gene family. Promoter analyses revealed enriched cis-regulatory elements associated with hormone response and developmental regulation. Functional analyses suggested potential roles for DlIDD genes in bamboo shoot development. Conclusions: This study provides a foundation for future research to elucidate the functions of IDD TFs and their regulatory mechanisms in bamboo shoot morphogenesis and lateral bud development within woody monocots. Full article
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24 pages, 16019 KB  
Article
Localization of Hydrogen Peroxide in Dormant Buds of Resistant and Susceptible Chestnut Cultivars: Changes During Gall Developmental Stages Induced by the Asian Chestnut Gall Wasp (Dryocosmus kuriphilus)
by Başak Müftüoğlu and Cevriye Mert
Plants 2025, 14(14), 2089; https://doi.org/10.3390/plants14142089 - 8 Jul 2025
Viewed by 656
Abstract
Asian chestnut gall wasp (ACGW) (Dryocosmus kuriphilus Yasumatsu), native to China, is an invasive pest that causes significant economic losses in Castanea species. While some cultivars show full resistance by inhibiting insect development in buds, the underlying defense mechanisms remain unclear. In [...] Read more.
Asian chestnut gall wasp (ACGW) (Dryocosmus kuriphilus Yasumatsu), native to China, is an invasive pest that causes significant economic losses in Castanea species. While some cultivars show full resistance by inhibiting insect development in buds, the underlying defense mechanisms remain unclear. In this study, the accumulation and distribution of hydrogen peroxide (H2O2) were investigated in dormant buds of chestnut cultivars that are resistant and susceptible to D. kuriphilus by using the 3,3′-diaminobenzidine (DAB) staining method. Buds were examined under a stereomicroscope during key stages of pest development, including oviposition, transition from egg to larva, gall induction, and gall development. Baseline levels of H2O2 were detected in all buds; however, these levels varied among cultivars, with resistant cultivars exhibiting lower basal levels. The degree of H2O2 accumulation was found to vary depending on plant–insect interaction, physiological processes, and cultivar-specific traits. Histochemical staining revealed that brown spots indicative of H2O2 accumulation were concentrated in the vascular bundles of leaf primordia and in the apical regions. In resistant hybrid cultivars, the defense response was activated at an earlier stage, while in resistant Castanea sativa Mill. cultivars, the response was delayed but more robust. Although consistently high levels of H2O2 were observed throughout the pest interaction in susceptible cultivars, gall development was not inhibited. During the onset of physiological bud break, increased H2O2 accumulation was observed across all cultivars. This increase was associated with endodormancy in susceptible cultivars and with both defense mechanisms and endodormancy processes in resistant cultivars. These findings highlight the significant role of H2O2 in plant defense responses, while also supporting its function as a multifunctional signaling molecule involved in gall development and the regulation of physiological processes. Full article
(This article belongs to the Special Issue Microscopy Techniques in Plant Studies—2nd Edition)
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14 pages, 7958 KB  
Article
ABA-Insensitive 5 (ABI5) Is Involved in ABA-Induced Dormancy via Activating PavCIG1/2 Expression in Sweet Cherries
by Jiyuan Wang, Li Wang, Muhammad Usman, Jie Zhu, Songtao Jiu, Ruie Liu and Caixi Zhang
Genes 2025, 16(5), 596; https://doi.org/10.3390/genes16050596 - 18 May 2025
Cited by 1 | Viewed by 898
Abstract
Background/Objectives: In perennial plants, developing floral buds survive winter through entering a dormant state, which is induced by low temperature and abscisic acid (ABA). ABA performs vital functions in the dormancy process. ABA-insensitive 5 (ABI5) transcription factor is a key regulator in the [...] Read more.
Background/Objectives: In perennial plants, developing floral buds survive winter through entering a dormant state, which is induced by low temperature and abscisic acid (ABA). ABA performs vital functions in the dormancy process. ABA-insensitive 5 (ABI5) transcription factor is a key regulator in the ABA signaling pathway. However, little is known about the regulation of ABI5 in the winter dormancy of sweet cherries. Methods: We identified the sweet cherry ABI5 gene and its expression changes using gene cloning and qRT-PCR. Additionally, we validated the interaction between PavABI5 and PavCIG1/2 using Yeast One-Hybrid and Dual-Luciferase Assays. Results: In this study, we identified a basic leucine zipper (bZIP) family gene ABI5 from the sweet cherry, which was closely related to PduABI5 from Prunus dulcis, PpABI5 from Prunus persica, PmABI5 from Prunus mume, and ParABI5 from Prunus armeniaca, through phylogenetic tree analysis. The seasonal expression pattern showed that the PavABI5 level was increased during the winter dormancy stage and induced by exogenous ABA. Specifically, we found that the expression of cherry cold-induced genes (PavCIG1/2) was positively correlated with PavABI5 expression. Furthermore, PavABI5 directly bound to the ABRE elements in the PavCIG1/2 promoters to activate their expression. We further confirmed that the dormancy-associated MADS-box (DAM) genes DAM4 and DAM5 function downstream of the ABA signaling pathway to regulate bud dormancy in sweet cherries. Conclusions: Our findings suggest a putative regulatory model of ABA-mediated bud-dormancy with PavABI5. Full article
(This article belongs to the Section Genes & Environments)
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25 pages, 5641 KB  
Article
Inoculum of Endophytic Bacillus spp. Stimulates Growth of Ex Vitro Acclimatised Apple Plantlets
by Jurgita Vinskienė, Inga Tamošiūnė, Elena Andriūnaitė, Dalia Gelvonauskienė, Rytis Rugienius, Muhammad Fahad Hakim, Vidmantas Stanys, Odeta Buzaitė and Danas Baniulis
Plants 2025, 14(7), 1045; https://doi.org/10.3390/plants14071045 - 27 Mar 2025
Cited by 1 | Viewed by 1071
Abstract
In vitro shoot culture and cryopreservation (CP) are techniques essential for the ex situ preservation of genetic resources and the production of plant propagation material of clonally propagated horticultural crops. Changes in plant-associated microbiota diversity and composition induced by in vitro cultivation and [...] Read more.
In vitro shoot culture and cryopreservation (CP) are techniques essential for the ex situ preservation of genetic resources and the production of plant propagation material of clonally propagated horticultural crops. Changes in plant-associated microbiota diversity and composition induced by in vitro cultivation and CP treatment could have a negative effect on the growth and ex vitro adaptation of the in vitro propagated shoots. Therefore, the aim of the present study was to assess changes in endophytic bacteria diversity in domestic apple tissues induced by in vitro cultivation and CP treatment and to investigate the potential of the bacterial inoculum to improve the rooting and ex vitro acclimatisation of the propagated shoots. Metataxonomic analysis revealed a variation in the endophytic bacteria diversity and taxonomic composition between the field-grown tree dormant bud and the in vitro propagated or CP-treated shoot samples of apple cv. Gala. Whereas Sphingobacteriaceae, Sphingomonadaceae, Pseudomonadaceae, and Beijerinckiaceae families were the most prevalent families in the bud samples, Enterobacteriaceae, Bacillaceae, and Lactobacillaceae were dominant in the in vitro shoots. The bacterial inoculum effect on rooting and ex vitro acclimatisation was assessed using four isolates selected by screening the endophytic isolate collection. Bacillus sp. L3.4, B. toyonensis Nt18, or a combined inoculum resulted in a 21%, 36%, and 59% increase in cumulative root length and a 41%, 46%, and 35% increase in the biomass accumulation of ex vitro acclimatised plantlets, respectively. Root zone microbiota functional diversity analysis implied that growth stimulation was not related to improved nutrient uptake but could involve a pathogen-suppressing effect. The results demonstrate that the application of plant growth-promoting bacteria can potentially improve the performance of the in vitro propagated germplasm. Full article
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14 pages, 1428 KB  
Article
Exogenous Cytokinins and Auxins Affect Double Cropping in Vitis vinifera L. cv. ‘Ortrugo’ Grown in a Temperate Climate: Preliminary Results
by Filippo Del Zozzo, Harsh Tiwari, Ginevra Canavera, Tommaso Frioni and Stefano Poni
Horticulturae 2025, 11(4), 346; https://doi.org/10.3390/horticulturae11040346 - 23 Mar 2025
Cited by 1 | Viewed by 881
Abstract
The success of double cropping in Vitis vinifera L. cultivated in temperate climates relies on bud forcing efficiency, which requires the prompt unlocking of apical dormant buds with sufficient fruitfulness. Chemical dormancy-breaking strategies need to be tested to enhance dormant bud forcing in [...] Read more.
The success of double cropping in Vitis vinifera L. cultivated in temperate climates relies on bud forcing efficiency, which requires the prompt unlocking of apical dormant buds with sufficient fruitfulness. Chemical dormancy-breaking strategies need to be tested to enhance dormant bud forcing in summer pruning, as hydrogen cyanamide, the most used agent, could damage green organs. This study tested whether foliar applications of cytokinins and auxins could modulate dormancy release, potentially affecting bud forcing dynamics and shoot fruitfulness. The forcing treatments involved trimming primary shoots at the eighth node, removing lateral shoots, and retaining the main leaves and inflorescences. Five treatments were investigated: unforced control, control + 6-Benzyladenine application, forcing (FR), forcing + 6-Benzyladenine application (FBA), and forcing + Naphthaleneacetic acid application (FNAA). Phenological evolution, vegetative and productive parameters, and physiological characteristics have been assessed. Results showed that among the forcing treatments, FBA showed the highest forced/primary shoots ratio (106%), followed by FR (94%) and FNAA (21%). Primary yields were similar across treatments (2.74 kg), but total yield was highest in FBA (4.78 kg, including 2.02 kg from forced grapes), followed by FR (3.62 kg, with 1.09 kg forced). FNAA yielded no forced crop. During forced grapes maturation, photosynthesis rates were higher in forced leaves (11.1 μmol m−2 s−1, as FR and FBA average) than primary leaves (−32%). Forced grapes ripened 47 days later and achieved higher sugar content (21.7 °Brix) and titratable acidity (10.6 g/L) than primary grapes. The findings suggest cytokinins application enhances bud forcing, supporting the feasibility of double cropping, while auxins limited it. Full article
(This article belongs to the Special Issue Orchard Management: Strategies for Yield and Quality)
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21 pages, 2532 KB  
Article
Artificial Sweet Cherry miRNA 396 Promotes Early Flowering in Vernalization-Dependent Arabidopsis Edi-0 Ecotype
by José Gaete-Loyola, Felipe Olivares, Gabriela M. Saavedra, Tiare Zúñiga, Roxana Mora, Ignacio Ríos, Gonzalo Valdovinos, Marion Barrera, Andrea Miyasaka Almeida and Humberto Prieto
Plants 2025, 14(6), 899; https://doi.org/10.3390/plants14060899 - 13 Mar 2025
Cited by 1 | Viewed by 1295
Abstract
The flowering and fruiting of sweet cherry (Prunus avium L.) depend on precise synchronization with seasonal events. During harsh autumn and winter conditions, floral buds enter dormancy to protect and prepare for the productive season. Dormancy release occurs after exposure to genotype-specific [...] Read more.
The flowering and fruiting of sweet cherry (Prunus avium L.) depend on precise synchronization with seasonal events. During harsh autumn and winter conditions, floral buds enter dormancy to protect and prepare for the productive season. Dormancy release occurs after exposure to genotype-specific chilling temperatures, an event in which epigenetic reprogramming triggers further metabolic and gene expression activation. Similarly, several Arabidopsis ecotypes require chilling (vernalization) to transition from vegetative to floral states. At vernalization’s end, the decrease in the repressor complex formed by SHORT VEGETATIVE PHASE (SVP) and FLOWERING LOCUS C (FLC) allows FLOWERING LOCUS T (FT) to induce flowering. However, this alone does not fully explain the process. MicroRNAs (miRNAs) play a crucial role in gene regulation during plant development and environmental interactions, and miR396’s role during flower development and vernalization has been described in some plant species, although not for sweet cherry dormancy. We used ‘Regina’, a high-chill sweet cherry variety, to identify candidate small RNA molecules throughout dormancy, resulting in the detection of miR396. The transcript expression levels of the putative miRNA target genes were evaluated through quantitative PCR analyses of dormant buds. Additionally, an artificial sweet cherry miR396 was used to transform Arabidopsis Edi-0, a vernalization-requiring ecotype. Ectopic expression of this artificial molecule partially mirrored the effect on target genes observed in dormant buds and, more importantly, led to vernalization-independent flowering. Artificial miR396 expression also resulted in decreased FLC and increased SVP and FT transcript levels. These results could pave the way for future studies on the involvement of miR396 in the regulation of dormancy and flowering, with potential applications in improving crop resilience and productivity. Full article
(This article belongs to the Special Issue Molecular Mechanisms of Flower Development and Plant Reproduction)
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11 pages, 5827 KB  
Article
Effects of Trunk Covering and Airflow Treatment on Sap Flux and Bud Burst During the Dormant Stage in ‘Fuji’ Apples
by Young-Min Choi and Dong-Geun Choi
Horticulturae 2025, 11(2), 108; https://doi.org/10.3390/horticulturae11020108 - 21 Jan 2025
Cited by 1 | Viewed by 1028
Abstract
The effects of recent climate change, including warm winters and repeated temperature fluctuations during dormancy, can lead to freezing injuries that result in significant economic losses in the fruit industry. This study aimed to examine the physiological responses of ‘Fuji’/M9 apple trees to [...] Read more.
The effects of recent climate change, including warm winters and repeated temperature fluctuations during dormancy, can lead to freezing injuries that result in significant economic losses in the fruit industry. This study aimed to examine the physiological responses of ‘Fuji’/M9 apple trees to trunk covering and continuous airflow treatments over 30 days, providing insights into mitigating freezing damage. The temperature difference between the sunlit and shaded sides of the trunk was lower in the whitewashed and foam insulation-covered treatments compared to those covered with newspaper, rice straw, or left uncovered. Under airflow treatment, the temperature difference in the uncovered control was 2.2 °C lower than in the non-airflow group, while no significant difference was observed in the whitewash treatment. Sap flow initiation was observed the earliest in the foam insulation-covered treatment and the latest in the whitewashed treatment. The timing of bud burst followed the order of foam insulation, rice straw, whitewash, newspaper, and the uncovered control. Furthermore, sap flow initiation and the bud burst period were delayed under airflow treatment compared to non-airflow conditions. This study provides fundamental insights into the effects of covering materials and airflow on apple tree physiology during dormancy, offering valuable information to guide future research in this field. Full article
(This article belongs to the Section Fruit Production Systems)
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15 pages, 2808 KB  
Article
Cryopreservation Protocols and the Associated Ultrastructural Changes in Dormant Buds of Vitis amurensis
by Dan Sun, Peijin Ni, Jian Liu, Zhenxing Wang, Guangli Shi, Meng Li, Xuanhe Zhang and Jun Ai
Plants 2024, 13(24), 3590; https://doi.org/10.3390/plants13243590 - 23 Dec 2024
Viewed by 905
Abstract
There is an urgent need for the cryopreservation of dormant buds to conserve the genetic resources of woody plants, particularly fruit trees, as this method is less time-consuming and relatively inexpensive. In the present study, three different cryopreservation protocols were tested on dormant [...] Read more.
There is an urgent need for the cryopreservation of dormant buds to conserve the genetic resources of woody plants, particularly fruit trees, as this method is less time-consuming and relatively inexpensive. In the present study, three different cryopreservation protocols were tested on dormant buds from three varieties of Vitis amurensis Rupr. The explants were collected between November 2017 and March 2018. Twig segments harvested from field-grown plants, each containing one dormant bud, were desiccated in a low-temperature test chamber at −5 °C. The viability of the buds was highest (45%) after 28–30 days of desiccation, when the moisture content was approximately 25–30%. Cryopreservation using the CP3 protocol (which involves decreasing the temperature at a rate of 0.1 °C/min to −30 °C and holding this temperature for 24 h, followed by a 0.5 °C/min decline to −80 °C, a 1 °C/min decline to −180 °C, and finally reaching −196 °C in a CryoMed controlled rate freezer) significantly enhanced the viability (66.67%) when the samples were packed in aluminum-foil bags. Additionally, immersing the twigs in ice-cold (4 °C) water for 24 h in a refrigerator during thawing proved to be more conducive to viability. The dormant buds of all three V. amurensis varieties collected in January exhibited the highest viability after cryopreservation, followed by those collected in February and December. In contrast, the dormant buds collected in November and March showed the lowest viability after cryopreservation. The average viability of twigs of ‘Shuanghong’, ‘Zuoshanyi’, and ‘Shuangfeng’ collected between 2019 and 2021 all exceeded 60%. After the cryopreservation process, the outer multilayered cells in the buds were completely damaged; however, the inner cells exhibited moderate damage and were able to resume growth after thawing. Therefore, based on graft viability and histological observations, the dormant bud cryopreservation protocols tested in this study could be applicable to these three V. amurensis varieties. Full article
(This article belongs to the Special Issue Sexual and Asexual Reproduction in Forest Plants)
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13 pages, 4590 KB  
Article
The Role of MaFAD2 Gene in Bud Dormancy and Cold Resistance in Mulberry Trees (Morus alba L.)
by Mengjie Zhao, Gaoxing Zhou, Peigang Liu, Zhifeng Wang, Lu Yang, Tianyan Li, Valiev Sayfiddin Tojiddinovich, Nasirillayev Bakhtiyar Ubaydullayevich, Ismatullaeva Diloram Adilovna, Khudjamatov Safarali Khasanboy Ugl, Yan Liu, Zhiqiang Lv, Jia Wei and Tianbao Lin
Int. J. Mol. Sci. 2024, 25(24), 13341; https://doi.org/10.3390/ijms252413341 - 12 Dec 2024
Cited by 2 | Viewed by 1401
Abstract
Bud dormancy is a critical adaptive trait in woody plants, essential for enduring harsh winter conditions. The relationship between bud break timing and cold resistance is complex and has been a subject of debate. This study utilizes a Genome-Wide Association Study (GWAS) on [...] Read more.
Bud dormancy is a critical adaptive trait in woody plants, essential for enduring harsh winter conditions. The relationship between bud break timing and cold resistance is complex and has been a subject of debate. This study utilizes a Genome-Wide Association Study (GWAS) on 201 natural mulberry populations to identify the MaFAD2 gene, which shows the strongest association with bud break timing. Known for its role in cold resistance, MaFAD2′s link to bud break timing suggests a direct correlation between these traits. Expression analysis of MaFAD2 in mulberry trees indicates peak activity in dormant buds, declining as dormancy ends. Selective sweep analysis on germplasms from contrasting climates reveals positive selection in MaFAD2 in cold-resistant Uzbek germplasms. Overexpression of MaFAD2 in early-budding germplasms significantly delays bud break, confirming its regulatory role. These findings highlight MaFAD2 as a key determinant of cold tolerance variability among mulberry germplasms, with its expression directly correlated with bud break timing. This provides a molecular basis for selecting cold-resistant mulberry germplasms based on bud break timing in breeding programs. Full article
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19 pages, 4279 KB  
Article
Transcriptome Analysis Provides Insights into the Safe Overwintering of Local Peach Flower Buds
by Ruxuan Niu, Yongjuan Cheng, Falin Wang, Yiwen Zhang and Chenbing Wang
Curr. Issues Mol. Biol. 2024, 46(12), 13903-13921; https://doi.org/10.3390/cimb46120831 - 9 Dec 2024
Cited by 2 | Viewed by 1251
Abstract
During the dormant period of peach trees in winter, flower buds exhibit weak cold resistance and are susceptible to freezing at low temperatures. Understanding the physiological and molecular mechanisms underlying the response of local peach buds to low-temperature adversity is crucial for ensuring [...] Read more.
During the dormant period of peach trees in winter, flower buds exhibit weak cold resistance and are susceptible to freezing at low temperatures. Understanding the physiological and molecular mechanisms underlying the response of local peach buds to low-temperature adversity is crucial for ensuring normal flowering, fruiting, and yield. In this study, the experimental materials included the conventional cultivar ‘Xia cui’ (XC) and the cold-resistant local resources ‘Ding jiaba’ (DJB) peach buds. The antioxidant enzyme activity, levels of malondialdehyde (MDA), proline (Pro), and hydrogen peroxide content (H2O2) were determined in peach buds at different dormancy periods. Transcriptome sequencing was performed at three dormancy stages: the dormancy entry stage (FD), deep dormancy release stage (MD), and dormancy release stage (RD). Additionally, transcriptome sequencing was conducted to analyze gene expression profiles during these stages. Our findings revealed that compared with XC cultivars, DJB peach buds exhibited decreased MDA and H2O2 contents but increased superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities as well as Pro content during the dormancy period. These findings suggest that cold-resistant cultivars possess significantly stronger antioxidant capacity than conventional cultivars under low-temperature stress. A total of 10,168 differential genes were annotated through transcriptome sequencing. Among them, 4975 were up-regulated while 5193 were down-regulated. The differentially expressed genes associated with low-temperature response in peach buds are primarily enriched in plant hormone signal transduction pathway and phenylpropane synthesis pathway. Key differentially expressed genes related to cold resistance include ARF2, GH3, and SAPK2, and differentially expressed transcription factors mainly belong to the AP2/ERF-ERF, bHLH, and C2H2 families. This study provides a theoretical foundation for understanding the key genes involved. Full article
(This article belongs to the Section Molecular Plant Sciences)
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17 pages, 4230 KB  
Review
Sugar Transport and Signaling in Shoot Branching
by Joan Doidy, Yuhui Wang, Léo Gouaille, Ingrid Goma-Louamba, Zhengrong Jiang, Nathalie Pourtau, José Le Gourrierec and Soulaiman Sakr
Int. J. Mol. Sci. 2024, 25(23), 13214; https://doi.org/10.3390/ijms252313214 - 9 Dec 2024
Cited by 3 | Viewed by 2685
Abstract
The source–sink relationship is critical for proper plant growth and development, particularly for vegetative axillary buds, whose activity shapes the branching pattern and ultimately the plant architecture. Once formed from axillary meristems, axillary buds remain dormant or become active to grow into new [...] Read more.
The source–sink relationship is critical for proper plant growth and development, particularly for vegetative axillary buds, whose activity shapes the branching pattern and ultimately the plant architecture. Once formed from axillary meristems, axillary buds remain dormant or become active to grow into new branches. This transition is notably driven by the regulation of the bud sink strength, which is reflected in the ability to unload, metabolize and store photoassimilates. Plants have so far developed two main mechanisms for unloading sugars (sucrose) towards sink organs, a symplasmic pathway and an apoplasmic pathway, but so far limited investigations have been reported about the modes of sugar uptake during the transition from the dormant to the active outgrowth state of the bud. The available data indicate that the switch from dormant bud to active outgrowing state, requires sugar and is shortly preceded by an increase in bud metabolic activity and a remobilization of the stem starch reserves in favor of growing buds. This activation of the bud sink strength is accompanied by an up-regulation of the main markers of apoplasmic unloading, such as sugar transporters (sucrose transporters—SUTs; sugar will eventually be exported transporters—SWEETs), sucrose hydrolyzing enzymes (cell wall invertase—CWINV) and sugar metabolic pathways (glycolysis/tricarboxylic cycle—TCA; oxidative pentose phosphate pathway—OPPP). As these results are limited to a few species, they are not sufficient to provide a complete and accurate picture of the mode(s) of sugar unloading toward axillary buds and deserve to be complemented by additional studies in a wide variety of plants using systems integration, combining genetic, molecular and immunolocalization approaches. Altogether, we discuss here how sugar is a systemic regulator of shoot branching, acting both as an energy-rich molecule and a signaling entity in the establishment of the bud sink strength. Full article
(This article belongs to the Special Issue Sugar Signaling in Plants and Its Interaction with Phytohormones)
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15 pages, 7754 KB  
Article
The Effects of Localized Heating and Ethephon Application on Cambial Reactivation, Vessel Differentiation, and Resin Canal Development in Lacquer Tree, Toxicodendron vernicifluum, from Winter to Spring
by Novena Puteri Tiyasa, Md Hasnat Rahman, Satoshi Nakaba and Ryo Funada
Forests 2024, 15(11), 1977; https://doi.org/10.3390/f15111977 - 8 Nov 2024
Cited by 2 | Viewed by 957
Abstract
Resin canals serve as a natural feature with the function of a defense system against fungi, bacteria, and insects. Trees can form these canals in response to mechanical injury and ecological disturbance. Factors, such as plant hormones and temperature, influence cambial activity and [...] Read more.
Resin canals serve as a natural feature with the function of a defense system against fungi, bacteria, and insects. Trees can form these canals in response to mechanical injury and ecological disturbance. Factors, such as plant hormones and temperature, influence cambial activity and cell differentiation. This study examined the effects of increased temperature and plant hormones on cambial reactivation, vessel formation, and resin canal formation using localized heating and the application of the ethylene generator ethephon to dormant stems of the Toxicodendron vernicifluum seedlings. Localized heating was achieved by wrapping an electric heating ribbon around dormant stems, while ethephon was applied to the bark surface. Treatment was initiated on 29 January 2021, including control, heating, ethephon, and a combination of heating and ethephon. Cambial reactivation and resin canal formation were monitored using light microscopy, and bud growth was recorded with a digital camera. Localized heating induced earlier phloem reactivation, cambial reactivation, and xylem differentiation, increasing the number of vessels. The application of exogenous ethylene delayed these processes. The combination of localized heating and exogenous ethylene application resulted in smaller vessels and larger resin canals. These results suggest that increased temperature plays a significant role in cambial reactivation and vessel formation in ring-porous hardwood and that ethylene affects vessel differentiation and resin canal development. Full article
(This article belongs to the Section Wood Science and Forest Products)
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Article
Transcriptomic and Physiological Analyses for the Role of Hormones and Sugar in Axillary Bud Development of Wild Strawberry Stolon
by Genqian Lan, Mingzhao Wu, Qihang Zhang, Bo Yuan, Guangxin Shi, Ni Zhu, Yibingyue Zheng, Qiang Cao, Qin Qiao and Ticao Zhang
Plants 2024, 13(16), 2241; https://doi.org/10.3390/plants13162241 - 13 Aug 2024
Cited by 2 | Viewed by 1755
Abstract
Strawberries are mainly propagated by stolons, which can be divided into monopodial and sympodial types. Monopodial stolons consistently produce ramets at each node following the initial single dormant bud, whereas sympodial stolons develop a dormant bud before each ramet. Sympodial stolon encompasses both [...] Read more.
Strawberries are mainly propagated by stolons, which can be divided into monopodial and sympodial types. Monopodial stolons consistently produce ramets at each node following the initial single dormant bud, whereas sympodial stolons develop a dormant bud before each ramet. Sympodial stolon encompasses both dormant buds and ramet buds, making it suitable for studying the formation mechanism of different stolon types. In this study, we utilized sympodial stolons from Fragaria nilgerrensis as materials and explored the mechanisms underlying sympodial stolon development through transcriptomic and phytohormonal analyses. The transcriptome results unveiled that auxin, cytokinin, and sugars likely act as main regulators. Endogenous hormone analysis revealed that the inactivation of auxin could influence bud dormancy. Exogenous cytokinin application primarily induced dormant buds to develop into secondary stolons, with the proportion of ramet formation being very low, less than 10%. Furthermore, weighted gene co-expression network analysis identified key genes involved in ramet formation, including auxin transport and response genes, the cytokinin activation gene LOG1, and glucose transport genes SWEET1 and SFP2. Consistently, in vitro cultivation experiments confirmed that glucose enhances the transition of dormant buds into ramets within two days. Collectively, cytokinin and glucose act as dormant breakers, with cytokinin mainly driving secondary stolon formation and glucose promoting ramet generation. This study improved our understanding of stolon patterning and bud development in the sympodial stolon of strawberries. Full article
(This article belongs to the Section Horticultural Science and Ornamental Plants)
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