Search Results (1,321)

Single nucleotide polymorphism (SNP) involves plenty of genetic disorders in organisms that can be passed down to the next generation or cause the stimulant signal that leads to early mortality in infants, especially within humankind. In medical field, real-time polymerase chain reaction (RT-PCR) is the most popular method for disease diagnosis. The investigation of genetic maps for the prediction of inherited illnesses needs the collaboration of sequencing technique and genome analysis. Although these methods are popular now, the cost for each test is quite high. Moreover, there is the requirement of extra machines and skillful technician or specialist level. Among these popular methods, the allele-specific polymerase chain reaction (AS-PCR), allele-specific loop isothermal mediated amplification (AS-LAMP), and allele-specific recombinase polymerase amplification (AS-RPA) are brought up for screening the nucleotide differences in the genetic sequence which will be noticed in this review as their availability, novelty, and potential for quick distinguishing of disease caused by SNP. Point-of-care testing (POCT) is a system built in a portable size but can perform the entire process of SNP recognition. Along with that, the POCT is intersected with the mentioned amplification methods and the genetic material preparation steps to become a united framework for higher efficiency and accuracy and lower cost. According to that, this review will focus on three common amplification techniques and their combination with POCT in the upstream and downstream process to genotype SNP related to human diseases. Full article

Display-field communication (DFC) is an imperceptible screen-to-camera technology that embeds and recovers data from the frequency domain of an image frame. Conventional DFC requires a reference frame for each data frame to estimate the channel, a method that, while reliable, is not bandwidth-efficient. Similarly, iterative DFC requires the transmission of pilot symbols for channel estimation. In this paper, we propose an implicit DFC (iDFC) scheme that eliminates the need for reference frames by estimating them using the first-order statistics of the received image. The system employs discrete Fourier-transform-based subcarrier mapping and adds data directly to the frequency coefficients of the host image. At the receiver, statistical estimation enables blind channel equalization without sacrificing the data rate. The simulation results show that iDFC achieves an achievable data rate (ADR) of up to $1.52\times {10}^5$ bps, a significant enhancement of approximately 97% and 11% compared to conventional and iterative DFC schemes, respectively. Furthermore, the analysis reveals a critical trade-off between communication robustness and visual imperceptibility; allocating 70% of signal power to the image maintains high visual quality but results in a symbol error rate (SER) floor of $1.5\times {10}^{-1}$, whereas allocating only 10% improves the SER to below ${10}^{-2}$ at the cost of visible artifacts. The findings also identify QPSK as the optimal modulation order that maximizes the data rate, showing that higher-order schemes can be detrimental due to system impairments such as signal clipping. The proposed iDFC scheme presents a more efficient and robust solution for high-capacity DFC applications by balancing the competing demands of data throughput and visual fidelity. Full article

Background: Inflammatory Bowel Disease (IBD), including Ulcerative Colitis and Crohn’s Disease, is a multifactorial inflammatory condition of the intestinal tract driven by a complex interplay of genetic factors, immune system dysfunction, and gut microbiota alterations. This review aims to synthesize current advancements in modern drug development strategies for IBD. It emphasizes the integration of computational modelling, cell-based experiments, and animal model studies to enhance translational outcomes. Methods: To compile this review, an extensive literature search was performed utilizing PubMed, Scopus, and Google Scholar databases for English-language research and review articles published between 2000 and 2025 using keywords such as “IBD,” “molecular docking,” “bioinformatics,” “organoids,” “animal models,” and “network pharmacology,” among others. A total of 199 peer-reviewed studies were identified for inclusion based on relevance, transparency, and methodological robustness. Results: The review outlines a range of cutting-edge approaches to IBD drug discovery. These include computer modelling, molecular docking, and network analysis to accelerate early-stage target prediction and drug screening. The review further highlights the critical importance of utilizing 2D and 3D cell culture systems in parallel with advanced animal models. It emphasizes the critical integration of computational predictions with biologically relevant in vitro and in vivo validations to improve the reliability and efficiency of drug development. Conclusions: The integration of computer modelling, cell culture systems, and animal studies provides a revolutionary paradigm for accelerating drug discovery to IBD and other diseases enabling personalized and more effective treatment approaches. Full article

Industrial microorganisms have a wide range of applications in biomanufacturing, energy production, environmental protectionpharmaceutical development, etc. Synthetic biology has revolutionised the field of industrial microorganisms by designing, constructing and optimising biological systems. The aim of this study is to discuss the key technologies of synthetic biology in industrial microorganisms and their application prospects. Gene editing technology, one of the core tools of synthetic biology, enables researchers to precisely modify microbial genomes to optimise their metabolic pathways or introduce new functions. Metabolic engineering, as an important direction for the application of synthetic biology in industrial microorganisms, enables the efficient synthesis of target products by optimising and reconstructing the metabolic pathways of microorganisms. The development of high-throughput screening and automated platforms has enabled large-scale gene editing and metabolic engineering experiments. The application of synthetic genomics promises to develop microbes with highly customised functions. However, there are still many challenges in this field, and future research still requires interdisciplinary collaboration to drive the application of synthetic biology in industrial microorganisms to new heights. Full article

Artificial intelligence (AI) often suffers from high energy consumption and complex deployment in resource-constrained environments, leading to a structural mismatch between capability and deployability. This review takes two representative scenarios—energy-first and performance-first—as the main thread, systematically comparing cloud, edge, and fog/cloudlet/mobile edge computing (MEC)/micro data center (MDC) architectures. Based on a standardized literature search and screening process, three categories of miniaturization strategies are distilled: redundancy compression (e.g., pruning, quantization, and distillation), knowledge transfer (e.g., distillation and parameter-efficient fine-tuning), and hardware–software co-design (e.g., neural architecture search (NAS), compiler-level, and operator-level optimization). The purposes of this review are threefold: (1) to unify the “architecture–strategy–implementation pathway” from a system-level perspective; (2) to establish technology–budget mapping with verifiable quantitative indicators; and (3) to summarize representative pathways for energy- and performance-prioritized scenarios, while highlighting current deficiencies in data disclosure and device-side validation. The findings indicate that, compared with single techniques, cross-layer combined optimization better balances accuracy, latency, and power consumption. Therefore, AI miniaturization should be regarded as a proactive method of structural reconfiguration for large-scale deployment. Future efforts should advance cross-scenario empirical validation and standardized benchmarking, while reinforcing hardware–software co-design. Compared with existing reviews that mostly focus on a single dimension, this review proposes a cross-level framework and design checklist, systematizing scattered optimization methods into reusable engineering pathways. Full article

N-Acetylneuraminic acid (Neu5Ac), the predominant form of sialic acids (Sias), is extensively utilized in the food, pharmaceutical, and cosmetic industries. Microbial fermentation serves as a critical production method for its economical, eco-friendly, and scalable production. Escherichia coli and Bacillus subtilis, as primary industrial workhorses for Neu5Ac production, have been extensively investigated owing to their well-characterized genetic frameworks and mature molecular toolkits. Nevertheless, the intricate regulatory networks inherent to microbial systems present formidable obstacles to the high-efficiency biosynthesis of Neu5Ac. This review delineates the genetic and molecular mechanisms underlying Neu5Ac biosynthesis in both E. coli and B. subtilis. Furthermore, the rational and irrational strategies for constructing Neu5Ac microbial cell factories are systematically summarized, including the application of rational metabolic engineering to relieve feedback regulation, reconfigure metabolic networks, implement dynamic regulation, and optimize carbon sources; as well as the use of irrational strategies including directed evolution of key enzymes and high-throughput screening based on biosensors. Finally, this review addresses current challenges in Neu5Ac bioproduction and proposes integrative solutions combining machine learning with systems metabolic engineering to advance the construction of high-titer Neu5Ac microbial cell factory and the refinement of advanced fermentation technologies. Full article

Patient-derived organoids (PDOs) have emerged as powerful tools in personalized medicine applicable to both non-malignant conditions and to cancer, where they are increasingly used for personalized drug screening and precision treatment strategies in part due to their ability to replicate tumor heterogeneity. They also serve as study model systems to understand disease mechanisms, pathways, and the impact of ex vivo exposures. We present a detailed step-by-step protocol for generating organoids from normal crypts, polyps, and tumors, including methods for tissue processing, crypt isolation, culture establishment, and the transition from basolateral to apical-out polarity for co-culture and exposure-based studies. The protocol also includes immunofluorescence staining procedures for cellular characterization and quality control measures. Our standardized approach successfully generates organoids from diverse colorectal tissues with high efficiency and reproducibility. This comprehensive guide addresses common technical challenges and provides troubleshooting strategies to improve success rates across different sample types. We believe that this resource will enhance reproducibility in organoid research and expand their utility in translational applications, particularly for personalized medicine approaches in colorectal cancer. Full article

Taro (Colocasia esculenta) is the fifth most cultivated root crop in the world. During the asexual reproduction of taro, the frequent mutation of somatic cells leads to high genetic diversity. With the continuous increase in the amount of taro germplasm resources collected, efficiently and accurately genotyping taro has become a major problem. The identification of taro resources using penta-primer amplification refractory mutation system single-nucleotide polymorphisms (SNP-PARMS) is a relatively efficient method. After resequencing 29 taro resources in this study, approximately 86.95 million SNPs were obtained. Then, 252 specific SNP loci were screened. Based on these 252 specific SNP loci, 36 pairs of PARMS-SNP markers were formed. Among them, 9 pairs of PARMS-SNP markers with a sample loss rate > 15% were eliminated, and finally 27 pairs of PARMS-SNP markers were determined. The average values of minimal allele frequency (MAF), polymorphic information content (PIC), gene diversity (GD), and heterozygosity of these markers are 0.63, 0.34, 0.49, and 0.45, respectively. We analyzed the population structure and the evolutionary group, and the results showed that the 72 taro resources could be divided into 6 groups. The clustering result of the 72 taro resources based on phenotypic traits showed a potential congruence with the result of grouping in the evolutionary tree, with only a few differences detected between the two classifications. Using these markers, DNA fingerprint maps of 72 taro resources were constructed, and all taro resources were differentiated. Some resources show potential similarities in DNA fingerprint maps, as well is in their phenotypic traits, confirming the validity of the fingerprint. The study’s findings serve as a reference for the analysis of the genetic diversity of taro resources. Full article

Inkjet printing enables contactless deposition onto fragile substrates for printed energy-storage devices and supports flexible batteries and supercapacitors with reduced material use. This review examines multilayer and interdigital architectures and analyzes how ink rheology, droplet formation, colloidal interactions, and the printability window govern performance. For batteries, reported inkjet-printed electrodes commonly deliver capacities of ~110–150 mAh g⁻¹ for oxide cathodes at C/2–1 C, with coulombic efficiency ≥98% and stability over 10²–10³ cycles; silicon anodes reach ~1.0–2.0 Ah g⁻¹ with efficiency approaching 99% under stepwise formation. Typical current densities are ~0.5–5 mA cm⁻² depending on areal loading, and multilayer designs with optimized drying and parameter tuning can yield rate and discharge behavior comparable to cast films. For supercapacitors, inkjet-printed microdevices report volumetric capacitances in the mid-hundreds of F cm⁻³, translating to ~9–34 mWh cm⁻³ and ~0.25–0.41 W cm⁻³, with 80–95% retention after 10,000 cycles and coulombic efficiency near 99%. In solid-state configurations, stability is enhanced, although often accompanied by reduced areal capacitance. Although solids loading is lower than in screen printing, precise material placement together with thermal or photonic sintering enables competitive capacity, rate capability, and cycle life while minimizing waste. The review consolidates practical guidance on ink formulation, printability, and defect control and outlines opportunities in greener chemistries, oxidation-resistant metallic systems, and scalable high-throughput printing. Full article

Objective: Root canal irrigation plays a critical role in achieving effective chemomechanical disinfection during endodontic therapy. Conventional syringe irrigation, typically using sodium hypochlorite, ethylenediaminetetraacetic acid, and chlorhexidine, is limited by its delivery method and often fails to adequately penetrate complex canal anatomies, compromising disinfection. Advancements such as ultrasonic and multisonic irrigation systems aim to address these limitations. This scoping review compares the clinical effectiveness of ultrasonic irrigation techniques with conventional syringe irrigation, focusing exclusively on in vivo studies conducted within the oral environment. Methods: A comprehensive scoping review was conducted using PubMed, Scopus, Dentistry & Oral Sciences Source, and Google Scholar. Peer-reviewed, full-text articles published in English between 2015 and 2025 were screened by four independent reviewers based on predefined inclusion and exclusion criteria. Eligible studies were thematically analyzed. Results: Of 312 records screened, eleven studies met the inclusion criteria. Ultrasonic irrigation was associated with improved clinical outcomes, particularly greater reductions in bacterial load and endotoxins; however, findings regarding its effect on postoperative pain were inconsistent, with some studies reporting a benefit while others observed no significant difference. These outcomes were attributed to mechanisms such as acoustic streaming and cavitation, which enhance irrigant penetration, promote fluid dynamics, and facilitate debridement in anatomically complex regions. Conclusions: Ultrasonic irrigation appears to hold promise for enhancing the efficacy and efficiency of root canal treatment. Existing in vivo studies suggest potential clinical advantages over conventional syringe irrigation, underscoring the need for further high-quality clinical research to more definitively establish its benefits. Full article

To overcome the production bottleneck induced by the high viscosity of extra-heavy oil and resolve the issues of limited efficiency in traditional thermal oil recovery methods (including cyclic steam stimulation (CSS), steam flooding, and steam-assisted gravity drainage (SAGD)) as well as the fragmentation of existing viscosity reducer evaluation systems, this study establishes a multi-dimensional evaluation system for the effectiveness of viscosity reducers, with stage-averaged remaining oil saturation as the core benchmarks. A “1D static → 2D dynamic → 3D synergistic” progressive sequential experimental design was adopted. In the 1D static experiments, multi-gradient concentration tests were conducted to analyze the variation law of the viscosity reduction rate of viscosity reducers, thereby screening out the optimal adapted concentration for subsequent experiments. For the 2D dynamic experiments, sand-packed tubes were used as the experimental carrier to compare the oil recovery efficiencies of ultimate steam flooding, viscosity reducer flooding with different concentrations, and the composite process of “steam flooding → viscosity reducer flooding → secondary steam flooding”, which clarified the functional value of viscosity reducers in dynamic displacement. In the 3D synergistic experiments, slab cores were employed to simulate the SAGD development process after multiple rounds of cyclic steam stimulation, aiming to explore the regulatory effect of viscosity reducers on residual oil distribution and oil recovery factor. This novel evaluation system clearly elaborates the synergistic mechanism of viscosity reducers, i.e., “chemical empowerment (emulsification and viscosity reduction, wettability alteration) + thermal amplification (steam carrying and displacement, steam chamber expansion)”. It fills the gap in the existing evaluation chain, which previously lacked a connection from static performance to dynamic displacement and further to multi-process synergistic adaptation. Moreover, it provides quantifiable and implementable evaluation criteria for steam–chemical composite flooding of extra-heavy oil, effectively releasing the efficiency-enhancing potential of viscosity reducers. This study holds critical supporting significance for promoting the efficient and economical development of extra-heavy oil resources. Full article

Integrating bioluminescent organisms as passive lighting sources in the built environment is currently a hot topic. However, there are several limitations facing the implementation and up-scaling of these naturally bioluminescent organisms in the built environment on architectural and urban scales, such as the scale, sensitivity, enclosure, and difficulty of maintenance. Moreover, there are complex technicalities and operational aspects of conventional bioreactors that host these bioluminescent agents, especially in terms of managing their recharge and effluent, not to mention their high maintenance cost. The current work offers a sustainable, stand-alone, bioluminescent urban screen system employing Aliivibrio fischeri CECT 524 bioink on 3D-printed customized scaffolds as bioreceptive panel design based on a field-diffusion pattern to host the bioluminescent bacterial bioink. The field-diffusion pattern was employed thanks to its proven efficiency in entrapment of the various microbial cultures. Three different growth media were tested for culturing Aliivibrio fischeri CECT 524, including Luria Bertani Broth (LB), the Tryptone Soy Broth (TSB), and the standard Marine Broth (MB). The results revealed that the Marine Broth (MB) media achieved the highest bioluminescent intensity and duration. The maximum light emission typically in range of ~490 nm of blue–green light captured by a conventional reflex camera (human eye vision) was observed for 10 consecutive days in complete darkness after 3–10 s, at a room temperature of 25 °C. This was visible mainly at the thin curvilinear peaks of the 3D-printed field pattern. P1 achieved the highest performance in terms of visible blue–green light, and a duration of 10 days of active bioluminescence was achieved without the need for refilling, thanks to the high number of peaks and narrow wells at <0.5 cm of its field-diffusion pattern. This study proves the efficiency of this biomimetic pattern in terms of the bioreceptivity of the bioluminescent bacterial bioink. Furthermore, the proposed 3D-printed urban screens proved their economic sustainability in terms of affordability and their minimized production processes, in addition to their easy maintenance and recharge. These results qualify these 3D-printed bioluminescent urban screens for easy and decentralized adoption and application on an architectural and urban scale. Full article

Research into floating photovoltaics (FPV) has seen a significant increase in recent years. Still, the observed outputs are poorly quantified, isolated, and occasionally contradictory, with reported cooling-induced efficiency increases varying widely across sources. To address the need for consensus in the field, a systematic literature review (SLR) and meta-analysis were conducted using the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) framework to provide a comprehensive overview of the current state-of-the-art in FPV systems. 3751 articles were identified through Boolean queries on three databases (Scopus, Web of Science, and Google Scholar). Using Python programming to ensure objectivity and replicability, the dataset was screened to 109 publications (subject to a manual, full-text review) relating strictly to modelling, simulation, and performance analysis of FPV systems with regard to the observed effect of reduced operating temperature. Focusing on these areas, this study provides a fundamental understanding of the temperature-based performance, as well as insights into the operation and simulation of FPV systems. Consistent temperature reductions were observed between ground-mounted and floating systems. Experimental data on FPV temperature were subject to a regression analysis, and the resulting equation was found to correspond well to a reported relation in the literature. The article concludes with a set of informed research directions to underpin the further development and implementation of FPV technology. Full article

Polyploidization is a rapid breeding strategy for producing new varieties with superior agronomic traits. Kenaf (Hibiscus cannabinus L.), an important fiber crop, exhibits high adaptability to diverse stress conditions. However, comprehensive studies on polyploid induction, screening, and genetic identification in kenaf remain unreported. This study first established an optimal tetraploid induction system for diploid kenaf seeds using colchicine. The results showed that a 4-h treatment with 0.3% colchicine yielded the highest tetraploid induction rate of 37.59%. Compared with diploids, tetraploid plants displayed distinct phenotypic and physiological characteristics: dwarfism with shortened internodal distance, increased stem thickness, larger and thicker leaves with deeper green color and serration, as well as enlarged flowers, capsules, and seeds. Physiologically, tetraploid leaves featured increased chloroplast numbers in guard cells, reduced stomatal density, and larger pollen grains, elevated chlorophyll content. Further analyses revealed that tetraploid kenaf had elevated contents of various trace elements, enhanced photosynthetic efficiency, prolonged growth duration, and superior agronomic traits with higher biomass (54.54% higher fresh weight, 79.17% higher dry weight). These findings confirm the effectiveness of colchicine-induced polyploidization in kenaf, and the obtained tetraploid germplasm provides valuable resources for accelerating the breeding of elite kenaf varieties with improved yield and quality. Full article

CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated protein) nucleases enable precise genome editing, but off-target cleavage remains a critical challenge. Here, we report the development of MAD7_HF, a high-fidelity variant of the MAD7 nuclease engineered through a bacterial screening system leveraging the DNA gyrase-targeting toxic gene ccdB. This system couples survival to efficient on-target cleavage and minimal off-target activity, mimicking the transient action required for high-precision editing. Through iterative selection and sequencing validation, we identified MAD7_HF, harboring three substitutions (R187C, S350T, K1019N) that enhanced discrimination between on- and off-target sites. In Escherichia coli assays, MAD7_HF exhibited a >20-fold reduction in off-target cleavage across multiple mismatch contexts while maintaining on-target efficiency comparable to wild-type MAD7. Structural modeling revealed that these mutations stabilize the guide RNA-DNA hybrid at on-target sites and weaken interactions with mismatched sequences. This work establishes a high-throughput bacterial screening strategy that allows the identification of Cas12a variants with improved specificity at a given target site, providing a useful framework for future efforts to develop precision genome-editing tools. Full article