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Keywords = leaf spot resistance

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17 pages, 2285 KB  
Article
Photosystem II Responses at the Whole-Potato-Leaf Level After Colorado Potato Beetle Feeding
by Ilektra Sperdouli, Stefanos S. Andreadis, Julietta Moustaka, Eleni I. Koutsogeorgiou, Emmanuel Panteris and Michael Moustakas
Plants 2026, 15(8), 1159; https://doi.org/10.3390/plants15081159 - 9 Apr 2026
Abstract
The damage caused by herbivores is generally measured as the amount of leaf tissue consumed, without accounting for the fate of the leftover tissue. As a result, the plant defense mechanisms that promote resistance to herbivore feeding by photosynthetically acclimating the rest of [...] Read more.
The damage caused by herbivores is generally measured as the amount of leaf tissue consumed, without accounting for the fate of the leftover tissue. As a result, the plant defense mechanisms that promote resistance to herbivore feeding by photosynthetically acclimating the rest of the plant to the feeding spot leaf area have not been well exploited. Plant-insect interactions are now becoming better defined with the development of visualization methods that permit spatial whole-leaf assessment of photosynthetic efficiency after herbivore attack. The purpose of our study was to evaluate the spatial heterogeneity of photosystem II (PSII) function at the whole-leaf level before and after herbivory by the Colorado potato beetles. Twenty minutes after Colorado potato beetle (Leptinotarsa decemlineata) feeding, the maximum efficiency of PSII photochemistry (Fv/Fm) decreased significantly, suggesting photoinhibition due to reduced efficiency of the oxygen-evolving complex (OEC). The decreased quantum yield of PSII photochemistry (ΦPSII) after feeding, at the neighboring area of the feeding spot and at the rest of the leaf area, was attributed to the reduced efficiency of the open PSII reaction centers (Fv′/Fm′), since there was no change in the fraction of open PSII reaction centers (qp). Nevertheless, plant defense elicitation was activated by the photoprotective mechanism of non-photochemical quenching (NPQ) that reduced the singlet oxygen (1O2) formation in potato plants in the neighboring area of the feeding spot and at the rest of the leaf area. In addition, the increased production of hydrogen peroxide (H2O2) triggered by this increase suggests that it acted as a signaling molecule in the biotic stress defense response. Full article
(This article belongs to the Section Crop Physiology and Crop Production)
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21 pages, 2695 KB  
Article
Marker-Assisted Breeding for Pyramiding Multiple Resistance to Soybean Fungal Diseases
by Carla María Lourdes Rocha, María Gabriela García, Esteban Mariano Pardo, José Ramón Sánchez, Atilio Pedro Castagnaro and María Amalia Chiesa
Agronomy 2026, 16(7), 754; https://doi.org/10.3390/agronomy16070754 - 2 Apr 2026
Viewed by 243
Abstract
Fungal diseases such as soybean stem canker (SSC), frogeye leaf spot (FLS), and sudden death syndrome (SDS) cause substantial yield losses in soybean worldwide. This study aimed to pyramid major resistance genes and QTLs against these diseases through marker-assisted backcrossing (MABC). Diagnostic SSR [...] Read more.
Fungal diseases such as soybean stem canker (SSC), frogeye leaf spot (FLS), and sudden death syndrome (SDS) cause substantial yield losses in soybean worldwide. This study aimed to pyramid major resistance genes and QTLs against these diseases through marker-assisted backcrossing (MABC). Diagnostic SSR markers, linked to Rdm4 (SSC), Rcs3 (FLS), and SDS resistance QTLs, were validated and successfully employed for foreground and background selection in crosses between the elite cultivar A8100RR and the resistant donor ‘Forrest’. Molecular analyses confirmed the effective introgression and fixation of multiple resistance loci in BC2F5 lines. Under artificial inoculation, lines R30-11 and R25-13 displayed high resistance levels to Diaporthe aspalathi, Cercospora sojina, Fusarium virguliforme, and F. tucumaniae. Genotype R30-11 exhibited the most consistent resistance across pathogens, while R25-13 combined multi-disease resistance with glyphosate tolerance and stable agronomic performance under field conditions comparable to commercial cultivars. These results represent, to our knowledge, the first report of successful pyramiding genes and QTLs against three distinct fungal diseases (SSC, FLS, and SDS) in soybean through MABC. The developed lines constitute valuable germplasm for breeding programs designed to achieve broad-spectrum, durable and sustainable disease management. Full article
(This article belongs to the Special Issue Functional Genomics and Molecular Breeding of Soybeans—2nd Edition)
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19 pages, 1741 KB  
Article
The copB Is a Key Copper Resistance Gene in Xanthomonas citri pv. mangiferaeindicae GXBS06
by Mengmeng Tang, Meijing Qin, Yu Miao, Fengzhi Bie, Shuxian Zhong, Yongqiang He and Wei Jiang
Genes 2026, 17(4), 408; https://doi.org/10.3390/genes17040408 - 31 Mar 2026
Viewed by 171
Abstract
Background/Objectives: Mango bacterial angular leaf spot, caused by Xanthomonas citri pv. mangiferaeindicae (Xcm), is one of the most destructive bacterial diseases of mango, resulting in significant economic losses to the mango industry. Copper-based bactericides have been widely used for decades to [...] Read more.
Background/Objectives: Mango bacterial angular leaf spot, caused by Xanthomonas citri pv. mangiferaeindicae (Xcm), is one of the most destructive bacterial diseases of mango, resulting in significant economic losses to the mango industry. Copper-based bactericides have been widely used for decades to control this disease, leading to increased copper resistance in the pathogen and heightened environmental risks. However, the copper resistance mechanisms of Xcm remain incompletely understood. Methods: In this study, we used Xcm GXBS06 isolated from major mango cultivars in Guangxi, China. We analyzed the homologs of known copper resistance-related genes in Xcm and found that these genes are relatively conserved across different strains. The functions of six important known copper resistance gene homologs in Xcm were investigated. Among them, five were functionally characterized by gene deletion, while the remaining one was characterized by overexpression because deletion was unsuccessful. Results: The result showed that copB is a critical copper resistance-related gene in Xcm. However, its deletion neither affects H2O2 tolerance nor virulence determinants such as extracellular polysaccharide production, biofilm formation, or cell motility. Additionally, it did not impact pathogenicity or bacterial growth within the host. The expression of copB was significantly induced at copper sulfate concentrations of 0.2 mM and 0.6 mM. Conclusions: These findings contribute to a better understanding of the copper resistance mechanisms in Xcm and provide a foundation for further studies on the biological control of this pathogen. Full article
(This article belongs to the Section Genes & Environments)
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10 pages, 1596 KB  
Communication
The Effect of Viral Infection on the Growth of HoneySweet GM Plum Trees
by Petr Komínek, Marcela Komínková and Jana Brožová
Plants 2026, 15(6), 903; https://doi.org/10.3390/plants15060903 - 14 Mar 2026
Viewed by 410
Abstract
Plum pox virus (PPV) is one of the most destructive pathogens affecting stone fruit trees. It causes sharka disease and severe yield losses. The genetically modified plum cultivar ‘HoneySweet’ was developed to provide long-lasting resistance to PPV via RNA interference. Long-term field trials [...] Read more.
Plum pox virus (PPV) is one of the most destructive pathogens affecting stone fruit trees. It causes sharka disease and severe yield losses. The genetically modified plum cultivar ‘HoneySweet’ was developed to provide long-lasting resistance to PPV via RNA interference. Long-term field trials of ‘HoneySweet’ have been conducted in the Czech Republic since 2001, involving the artificial inoculation of the cultivar with PPV alone, and with apple chlorotic leaf spot virus (ACLSV) and prune dwarf virus (PDV) in combination. This study evaluates the impact of viral infection on tree growth after 24 years in the field. Growth parameters—trunk cross-sectional area (TCSA) and canopy volume—were measured and analysed using ANOVA and Tukey’s test. The results show that infected trees exhibit significantly reduced growth compared to non-infected controls, with the strongest inhibition observed in trees inoculated with PPV + PDV + ACLSV. The presence of ACLSV had the most pronounced negative effect on growth, while PDV did not significantly influence tree vigour. These findings emphasise the importance of using virus-free rootstocks and certified planting material to prevent growth suppression in HoneySweet orchards. Full article
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14 pages, 1332 KB  
Article
Disease Management Maintains Adequate Chlorophyll a Fluorescence and Enhances Wheat Grain Technological Quality
by Andrea Román, Carlos Eduardo Aucique-Perez, Martha Zavariz de Miranda, Pihetra Oliveira Tatsch, Eduardo Rodríguez and Leandro José Dallagnol
Plants 2026, 15(5), 688; https://doi.org/10.3390/plants15050688 - 25 Feb 2026
Viewed by 376
Abstract
Leaf and spike diseases can significantly reduce wheat yield and grain quality. To mitigate these impacts, an integrated disease management approach can be adopted, incorporating measures such as the use of resistant cultivars, fungicides and nitrogen fertilization. This study aimed to evaluate the [...] Read more.
Leaf and spike diseases can significantly reduce wheat yield and grain quality. To mitigate these impacts, an integrated disease management approach can be adopted, incorporating measures such as the use of resistant cultivars, fungicides and nitrogen fertilization. This study aimed to evaluate the impact of these practices on chlorophyll a fluorescence, yield components, and the technological quality of wheat grains. The area under the disease progress curve (AUDPC) was correlated with the maximum efficiency of photosystem II (PSII) photochemistry (Fv/Fm), as measured at the dough development stage (ZGS80) under field conditions, which also affected quality parameters. Additionally, an increase in AUDPC values reduced the thousand kernel weight (TKW) and test weight (TW). Conversely, AUDPC values for tan spot, powdery mildew and leaf rust were positively related to ash content (affecting flour color), protein content (PC) and grain falling number. Both the recommended nitrogen rate (130 kg ha−1) and the high rate (200 kg ha−1) increased grain protein content (PC) and gluten index (GI), while maintaining dough stability and water absorption. Fungicide application increased flour lightness and yellowness. Overall, integrated disease management combining moderately resistant cultivars, fungicide applications and nitrogen fertilization reduced AUDPC values, increased Fv/Fm (indicating optimal physiological performance) and ensured yield components and maintenance of wheat technological quality. Full article
(This article belongs to the Section Plant Protection and Biotic Interactions)
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23 pages, 2456 KB  
Article
Research on Intelligent Thermal Optimization for Chiplet-Based Heterogeneously Integrated AI Chip Embedded with Leaf-Vein-Inspired Fractal Microchannels
by Jie Wu, Yu Liang, Guibin Liu, Ruiyang Pang, Yi Teng, Chen Li, Xuetian Bao, Shi Lei and Zhikuang Cai
Materials 2026, 19(4), 679; https://doi.org/10.3390/ma19040679 - 10 Feb 2026
Viewed by 1045
Abstract
Conventional cooling schemes that rely on rigid heat-sink-to-die coupling in vertical stacks fail to track the dynamic, non-uniform heat map of high-performance artificial-intelligence (AI) chips employing chiplet-based heterogeneous integration, giving rise to local hot spots. To eliminate this mismatch, we present a leaf-vein-inspired [...] Read more.
Conventional cooling schemes that rely on rigid heat-sink-to-die coupling in vertical stacks fail to track the dynamic, non-uniform heat map of high-performance artificial-intelligence (AI) chips employing chiplet-based heterogeneous integration, giving rise to local hot spots. To eliminate this mismatch, we present a leaf-vein-inspired fractal microchannel tailored for such AI processors. Its hierarchical bifurcation–confluence topology adaptively reshapes the flow field, delivering ultra-low thermal resistance, high heat-transfer coefficients, and uniform dissipation. Coupled with reconfigurable chiplet placement, the design is evaluated through FEM-based orthogonal experiments that rank the influence of coolant, channel diameter/depth, inlet/outlet position, substrate thickness, and flow rate via range analysis and Analysis of Variance (ANOVA). A machine-learned surrogate model of junction temperature is then fed to Particle Swarm Optimization (PSO) for multi-parameter optimization. When re-simulated with the optimal parameter set, the symmetric fractal network lowered the AI chip junction temperature from 127.80 °C to 30.97 °C, a 76% improvement, offering a theoretical basis for hotspot mitigation in advanced heterogeneous AI packages. Full article
(This article belongs to the Special Issue Microstructural and Mechanical Characteristics of Welded Joints)
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25 pages, 853 KB  
Article
Molecular Marker-Based Identification of Resistance to Bipolaris sorokiniana in Kazakh and Global Wheat Germplasm
by Ardak Bolatbekova, Alma Kokhmetova, Yerlan Dutbayev, Göksel Özer, Madina Kumarbayeva, Sholpan Bastaubayeva, Aidana Kharipzhanova, Makpal Nurzhuma, Zhenis Keishilov, Assiya Kokhmetova, Kanat Bakhytuly, Kanat Mukhametzhanov and Vladimir Tsygankov
Biology 2026, 15(3), 244; https://doi.org/10.3390/biology15030244 - 28 Jan 2026
Cited by 1 | Viewed by 638
Abstract
Diseases caused by Bipolaris sorokiniana, expressed as leaf spot blotch (SB) and common root rot (CRR), continue to limit spring wheat production, particularly in dry regions where yield losses may reach 35–40%. This study evaluated resistance to SB and CRR in fifty [...] Read more.
Diseases caused by Bipolaris sorokiniana, expressed as leaf spot blotch (SB) and common root rot (CRR), continue to limit spring wheat production, particularly in dry regions where yield losses may reach 35–40%. This study evaluated resistance to SB and CRR in fifty spring wheat genotypes at both seedling and adult plant stages and identified genetic sources of resistance using molecular markers linked to the Sb1 and Sb2 genes. Field trials were conducted in 2023 and 2024 in the Aktobe region under natural infection, artificial inoculation, and a fungicide-treated background. Based on leaf spot blotch severity quantified as the area under the disease progress curve (leaf AUDPC) under natural infection, nine genotypes displayed stable resistance across both years, while fungicide-treated plots revealed twenty-three resistant genotypes in 2023 and eighteen in 2024. Artificial inoculation identified five resistant lines in 2023 and one in 2024. Resistance to common root rot (CRR) was assessed independently based on subcrown internode (SCI) browning at the adult plant stage. Seedling assays confirmed consistent resistance in six genotypes, all of which carried Sb1, Sb2, or their combination. In total, Sb genes were detected in thirty-six of the fifty accessions, including genotypes from Kazakhstan, Russia, and several other countries. The presence of Sb1 or Sb2 was associated with reduced disease severity, particularly at the seedling stage. These findings identify valuable germplasm for breeding wheat with improved resistance to B. sorokiniana in Kazakhstan. Full article
(This article belongs to the Special Issue The Potential of Genetics and Plant Breeding in Crop Improvement)
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12 pages, 5012 KB  
Article
Study on the Relationship Between Exogenous Salicylic Acid-Induced Pear Resistance to Black Spot Disease and Lignin Synthesis
by Qi Yan, Weiyi Chen, Yarui Wei, Hui Zhang, Na Liu and Yuxing Zhang
Horticulturae 2026, 12(1), 104; https://doi.org/10.3390/horticulturae12010104 - 18 Jan 2026
Viewed by 254
Abstract
Pear black spot disease is a serious fungal disease during pear production; salicylic acid is a core signaling molecule that regulates the expression of plant disease resistance genes. To elucidate the intrinsic association between salicylic acid-induced resistance to pear black spot disease and [...] Read more.
Pear black spot disease is a serious fungal disease during pear production; salicylic acid is a core signaling molecule that regulates the expression of plant disease resistance genes. To elucidate the intrinsic association between salicylic acid-induced resistance to pear black spot disease and lignin biosynthesis, in vitro plantlets of two pear cultivars, ‘Xinli No.7’ and ‘Xueqing’, were employed as experimental materials. After 60 h SA pretreatment, the leaves were inoculated with the pathogen Alternaria alternata. Leaf samples were harvested at 0, 8, 16, 24, and 48 h post-inoculation to determine phenylalanine ammonia-lyase activity, quantify lignin content, and analyze the transcript levels of genes involved in lignin synthesis. The results demonstrated that, relative to the untreated control group, SA treatment significantly enhanced phenylalanine ammonia-lyase activity and promoted lignin accumulation in both ‘Xinli No.7’ and ‘Xueqing’. Moreover, multiple key genes associated with lignin biosynthesis—including PbrPAL1, Pbr4CL1, PbrCOMT, PbrCCoAOMT, PbrCAD, and PbrPOD—were markedly upregulated, with their expression levels increasing by 3.5–15 fold. Transcript profiles of PbrHCT1, PbrHCT4, and PbrC3H1 exhibited cultivar-specific divergence between the two varieties. Notably, the susceptible cultivar ‘Xueqing’ displayed a distinct lag phase and attenuated response in the expression of all lignin-related genes compared with the other cultivar. This study provides reference for green prevention and sustainable development of pear. Full article
(This article belongs to the Section Plant Pathology and Disease Management (PPDM))
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18 pages, 5544 KB  
Article
Functional Analysis of Maize SDG102 Gene in Response to Setosphaeria turcica
by Xin Qi, Xing Zhang, Xiaoxiao Ma, Xinyi Zhao, Xinyang Liu, Xiaoshuang Wei, Huai Tian, Yang Liu, Jianhua Zhang and Zhenhui Wang
Plants 2025, 14(22), 3463; https://doi.org/10.3390/plants14223463 - 13 Nov 2025
Viewed by 776
Abstract
Northern corn leaf blight (NCLB), caused by the fungal pathogen Setosphaeria turcica, is a devastating foliar disease that significantly threatens maize production in China. Previous studies have demonstrated that SET domain gene 102 (SDG 102), a gene encoding an H3K36 [...] Read more.
Northern corn leaf blight (NCLB), caused by the fungal pathogen Setosphaeria turcica, is a devastating foliar disease that significantly threatens maize production in China. Previous studies have demonstrated that SET domain gene 102 (SDG 102), a gene encoding an H3K36 methyltransferase, plays a crucial role in regulating maize growth, development, and stress responses. This study used the wild-type (WT), SDG102 overexpression line (OE), and silencing line (SL) of the corn inbred line B73 as materials. After artificial inoculation with S. turcica, the phenotypic characteristics, disease index, yield, and other related traits of different strains were compared, and RNA-Seq was used to analyze the changes in the gene expression profile. The results showed that overexpression of SDG102 significantly inhibited pathogen spore germination and hyphal growth and enhanced the activity of antioxidant enzymes and the ability to scavenge reactive oxygen species in plants prior to S. turcica infection, the opposite trend was observed in SDG102 silencing lines. Compared with the wild-type, 1546 and 1837 differentially expressed genes (DEGs) responsive to S. turcica were identified in OE and SL, respectively. These differentially expressed genes primarily function in pathways such as plant–pathogen interactions, plant hormone signaling, and secondary metabolite biosynthesis. In the OE lines, genes related to plant–pathogen interactions, reactive oxygen species (ROS) production, and key phenylpropanoid biosynthesis genes exhibited higher expression levels. Furthermore, SDG102 regulates the synthesis of auxin (JA) and abscisic acid (SA) as well as the transcription of their signaling pathway genes, thereby influencing maize resistance to large leaf spot disease. Under corn leaf blight conditions, SDG102 overexpression increased yield by 9.29% compared to WT, while SL reduced yield by 10.10%. In conclusion, SDG102 enhances maize resistance to NCLB by positively regulating the expression of disease resistance genes, antioxidant enzyme activity, and hormone-mediated defense pathways. Full article
(This article belongs to the Section Plant Genetics, Genomics and Biotechnology)
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23 pages, 2891 KB  
Article
Effect of Xylopia frutescens Essential Oil on the Activation of Defense Mechanisms Against Phytopathogenic Fungi
by Dalmarcia de Souza C. Mourão, Bruna L. Dias, Mateus S. Dalcin, Luis O. Viteri, Manuel A. Gonzales, Paulo R. S. Fernandes, Vitória B. Silva, Mariana A. Costa, Maria J. González, Ana G. Amaral, Ildon R. do Nascimento, Cristiano B. de Moraes, Vânia Thais S. Gomes, Marcos P. Câmara, Marcos G. da Silva, Adalberto C. Café-Filho, Wellington S. Moura and Gil R. dos Santos
Microorganisms 2025, 13(11), 2571; https://doi.org/10.3390/microorganisms13112571 - 11 Nov 2025
Cited by 1 | Viewed by 772
Abstract
The induction of resistance in plants involves prior activation of physiological and biochemical systems in the face of external stimuli, promoting greater tolerance to biotic stresses. Faced with the growing challenge of emerging diseases in agricultural plants and the search for more sustainable [...] Read more.
The induction of resistance in plants involves prior activation of physiological and biochemical systems in the face of external stimuli, promoting greater tolerance to biotic stresses. Faced with the growing challenge of emerging diseases in agricultural plants and the search for more sustainable phytosanitary practices, natural substances are promising alternatives. Xylopia frutescens, known as “pindaiba-da-folha-pequena”, native to the Brazilian Cerrado and traditionally used as an antimicrobial treatment, is still little-explored in the literature and presents potentially effective compounds for the control of plant diseases. This study characterized the chemical composition and thermal stability of the X. frutescens essential oil (XEO), while evaluating its physiological and phytotoxic effects and the potential for disease control in maize and cowpea plants. The main constituents found in X. frutescens essential oil were nopinone (13.75%), spatulenol (12.94%), myrtenal (12.47%), and β-pinene (11.02%). Thermogravimetric analysis indicated that X. frutescens is highly volatile, with a large mass loss at 94.74 °C. In bioassays, the oil preserved chlorophyll levels at adequate amounts and activated several antioxidant mechanisms, but also showed a dose-dependent phytotoxic effect. In vitro assays further confirmed its antifungal activity against key phytopathogens, supporting its potential use in disease control. A general increase in the activities of the enzymes superoxide dismutase (SOD), ascorbate peroxidase (APx) and—partially—chitinase (CHIT) was observed. Catalase (CAT) decreased in both maize and cowpea plants treated with this essential oil but was higher in untreated infected plants. Such enzymatic changes suggest that the oil acts as a natural elicitor of resistance, strengthening biochemical and physiological defenses. Finally, disease severities, as measured by AUDPCs, demonstrated significant reductions in the progress of maize “Curvularia leaf spot” (Curvularia lunata) and cowpea “Web blight” (Rhizoctonia solani). The results highlight the potential of X. frutescens essential oil as an active compound stimulating defense mechanisms for applications in sustainable agricultural systems. Full article
(This article belongs to the Special Issue Advances in Fungal Plant Pathogens: Diagnosis, Resistance and Control)
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16 pages, 2906 KB  
Article
Functional Characterization of Rice Spotted-Leaf Mutant HM113 Reveals an Amino Acid Substitution in a Cysteine-Rich Receptor-like Kinase
by Ringki Kuinamei Sanglou, Marie Gorette Kampire, Xia Xu, Jian-Li Wu, Junyi Gong and Xiaobo Zhang
Plants 2025, 14(22), 3429; https://doi.org/10.3390/plants14223429 - 9 Nov 2025
Viewed by 809
Abstract
The spotted-leaf mutant, characterized by spontaneous lesion formation resembling pathogen-induced hypersensitive cell death, serves as an ideal model for studying the molecular mechanisms behind rice (Oryza sativa) disease resistance and programmed cell death, as these plants display hypersensitive responses that mimic [...] Read more.
The spotted-leaf mutant, characterized by spontaneous lesion formation resembling pathogen-induced hypersensitive cell death, serves as an ideal model for studying the molecular mechanisms behind rice (Oryza sativa) disease resistance and programmed cell death, as these plants display hypersensitive responses that mimic those triggered by pathogen infection. In this study, we generated a knockout line using CRISPR/Cas9 technology in homologous mutant HM113-induced calli. LOC_Os07g30510 encodes a cysteine-rich receptor kinase with a DUF26 domain, consisting of 688 amino acids. HM113 was localized to the cytosol and expressed in most rice tissues at various growth stages. A single nucleotide substitution from A to T was observed at the 847th base of LOC_Os07g30510, causing an amino acid change from serine to cysteine. Our results demonstrated that the A847T mutation was responsible for the spotted-leaf phenotype in the HM113 mutant through gene editing technology, as new frameshift mutations were introduced upstream of the A847T site in the HM113 gene. The mutation phenotype of HM113 was eliminated and resistance to bacterial blight was also lost, indicating that it is a gain-of-function gene. Full article
(This article belongs to the Special Issue Crop Functional Genomics and Biological Breeding—2nd Edition)
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19 pages, 6205 KB  
Article
Transcriptome and Metaproteome Analysis of Rhododendron hybridum Leaf Defense Responses to Neopestalotiopsis clavispora Infection
by Su Gong, Yizhen Wang, Yunhong Luo, Fubao Wu, Shanshan Yu, Lunxian Liu, Zhimeng Su, Ming Tang, Jing Tang, Wei Sun, Zaiqi Luo, Yin Yi and Ximin Zhang
Horticulturae 2025, 11(11), 1300; https://doi.org/10.3390/horticulturae11111300 - 29 Oct 2025
Viewed by 783
Abstract
Brown leaf spot, a severe fungal disease in Rhododendron, substantially impairs its ornamental and economic value. However, the molecular mechanisms governing the interaction between Rhododendron leaves and the pathogen are still poorly understood. In this study, the less susceptible Rhododendron hybridum ‘Yangmeihong’ [...] Read more.
Brown leaf spot, a severe fungal disease in Rhododendron, substantially impairs its ornamental and economic value. However, the molecular mechanisms governing the interaction between Rhododendron leaves and the pathogen are still poorly understood. In this study, the less susceptible Rhododendron hybridum ‘Yangmeihong’ (YMH) and the highly susceptible R. hybridum ‘Xiaotaohong’ (XTH) leaves were selected for transcriptomic and widely targeted metabolomic analyses. We compared constitutive metabolite profiles prior to inoculation as well as differentially expressed gene (DEGs) and differentially accumulated metabolites (DAMs) at two days post-inoculation (dpi) with Neopestalotiopsis clavispora. Results showed that YMH leaves exhibited 273 upregulated constitutive metabolites, whereas XTH had only 46. After infection, DEGs in YMH leaves were significantly enriched in pathways including flavonoid biosynthesis and glycerolipid metabolism, while XTH showed enrichment in vitamin B6 metabolism and glutathione metabolism. Metabolomic analysis identified 788 metabolites at 2 dpi, with YMH accumulating 49 DAMs and XTH accumulating 115 DAMs. Integrated transcriptomic and metabolomic analyses further revealed distinctions in reactive oxygen species (ROS) scavenging mechanisms between the two cultivars. These findings offer valuable insights for developing disease-resistant breeding and control strategies in Rhododendron. Full article
(This article belongs to the Section Genetics, Genomics, Breeding, and Biotechnology (G2B2))
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26 pages, 850 KB  
Review
The Enhancement of Fungal Disease Resistance in Major Staple Crops Using CRISPR-Cas Technology
by Zagipa Sapakhova, Rakhim Kanat, Dias Daurov, Ainash Daurova, Malika Shamekova and Kabyl Zhambakin
Genes 2025, 16(11), 1263; https://doi.org/10.3390/genes16111263 - 26 Oct 2025
Cited by 1 | Viewed by 2750
Abstract
Fungal pathogens represent a major constraint to global agricultural productivity, causing a wide range of plant diseases that severely affect staple crops such as cereals, legumes, and vegetables. These infections result in substantial yield losses, deterioration of grain and produce quality, and significant [...] Read more.
Fungal pathogens represent a major constraint to global agricultural productivity, causing a wide range of plant diseases that severely affect staple crops such as cereals, legumes, and vegetables. These infections result in substantial yield losses, deterioration of grain and produce quality, and significant economic impacts across the entire agri-food sector. Among phytopathogens, fungi are considered the most destructive, causing a wide range of diseases such as powdery mildew, rusts, fusarium head blight, smut, leaf spot, rots, late blight, and other fungal pathogens. Traditional plant protection methods do not always provide long-term effectiveness and environmental safety, which requires the introduction of innovative approaches to creating sustainable varieties. CRISPR-Cas technology opens up new opportunities for targeted genome editing, allowing the modification or silencing of susceptibility genes and thus increasing plant resistance to fungal infections. This review presents current achievements and prospects for the application of CRISPR-Cas technology to increase the resistance of major agricultural crops to fungal diseases. The implementation of these approaches contributes to the creation of highly productive and resistant varieties, which is crucial for ensuring food security in the context of climate change. Full article
(This article belongs to the Section Plant Genetics and Genomics)
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30 pages, 9645 KB  
Review
Molecular Breeding for Fungal Resistance in Common Bean
by Luciana Lasry Benchimol-Reis, César Júnior Bueno, Ricardo Harakava, Alisson Fernando Chiorato and Sérgio Augusto Morais Carbonell
Int. J. Mol. Sci. 2025, 26(21), 10387; https://doi.org/10.3390/ijms262110387 - 25 Oct 2025
Cited by 2 | Viewed by 1249
Abstract
Despite the recognized social and economic importance of common beans (Phaseolus vulgaris L.), the average grain yield is far below the productive potential of cultivars. This situation is explained by several factors, such as the large number of diseases and pests that [...] Read more.
Despite the recognized social and economic importance of common beans (Phaseolus vulgaris L.), the average grain yield is far below the productive potential of cultivars. This situation is explained by several factors, such as the large number of diseases and pests that affect the crop, some of which cause significant damage. It is estimated that approximately 200 diseases can significantly affect common beans. These can be bacterial, viral, fungal, and nematode-induced. The main bean fungal diseases include anthracnose, angular leaf spot, powdery mildew, gray mold, Fusarium wilt, dry root rot, Pythium root rot, southern blight, white mold, charcoal rot and rust. This review provides a comprehensive overview of eleven major fungal diseases affecting common bean, describing their associated damage, characteristic symptomatology, and the epidemiological factors that favor disease development. It further synthesizes current knowledge on host resistance mechanisms that can be exploited to develop molecularly informed resistant genotypes. The compilation includes characterized resistance genes and mapped quantitative trait loci (QTLs), with details on their chromosomal locations, genetic effects, and potential for use in breeding. Moreover, the review highlights successful applications of molecular breeding approaches targeting fungal resistance. Finally, it discusses conclusions and future perspectives for integrating advanced genetic improvement strategies—such as marker-assisted selection, genomic selection, gene editing, and pyramiding—to enhance durable resistance to fungal pathogens in common bean. This work serves as both a reference for forthcoming resistance-mapping studies and a guide for the strategic selection of resistance loci in breeding programs aimed at developing cultivars with stable and long-lasting fungal resistance. Full article
(This article belongs to the Special Issue Plant Breeding and Genetics: New Findings and Perspectives)
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27 pages, 4118 KB  
Article
Improvement of Premium Oil Soybean Variety Heinong 551 with Integrating Conventional Hybridization and Gamma Radiation
by Xiulin Liu, Xueyang Wang, Kezhen Zhao, Chunlei Zhang, Fengyi Zhang, Rongqiang Yuan, Sobhi F. Lamlom, Honglei Ren and Bixian Zhang
Life 2025, 15(10), 1616; https://doi.org/10.3390/life15101616 - 16 Oct 2025
Cited by 1 | Viewed by 684
Abstract
Meeting the growing demand for vegetable oil while promoting agricultural sustainability in Northeast China requires developing high-yield, high-oil-content soybean varieties. We present the comprehensive development and evaluation of Heinong 551, an innovative soybean variety created through an integrated approach of conventional breeding methods [...] Read more.
Meeting the growing demand for vegetable oil while promoting agricultural sustainability in Northeast China requires developing high-yield, high-oil-content soybean varieties. We present the comprehensive development and evaluation of Heinong 551, an innovative soybean variety created through an integrated approach of conventional breeding methods and radiation-induced mutation techniques. The breeding program began with hybridization between Heinong 44 (the maternal parent) and Hefeng 47 (the paternal parent), followed by targeted exposure to 60Co gamma radiation at 130 Gy to induce beneficial mutations. Using systematic selection protocols over five generations from 2012 to 2016, we identified superior lines that underwent rigorous multi-location testing across seven sites in Heilongjiang Province during 2020–2021. Field evaluation results showed consistent performance, with Heinong 551 achieving average yields of 2901 kg/ha and 3142 kg/ha in those years, representing significant gains of 10. 6% and 11.0. 0% compared to standard control varieties. The cultivar maintained stable phenological traits with a reliable 120-day maturation period and demonstrated strong environmental adaptability across different growing conditions. Biochemical analysis revealed excellent nutritional value, with 39.45% crude protein and 21.69% crude fat, reaching a combined protein–fat percentage of 61.14%. Quality tests confirmed superior seed integrity, with sound seed rates over 97% and minimal pest or disease damage. Disease resistance assessments showed moderate tolerance to gray leaf spot while maintaining excellent overall plant health, with no signs of viral infections or nematode infestations during testing. Heinong 551 has received official approval for cultivation in Heilongjiang Province’ s second accumulated temperature zone, characterized by thermal units ≥2550 °C above a 10 °C threshold. This represents significant progress in high-oil soybean variety development, illustrating the success of combining traditional breeding methods with modern mutation technology. Full article
(This article belongs to the Section Plant Science)
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