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Search Results (1,264)

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20 pages, 3229 KB  
Article
In Vivo Response of γδ T Cells and Macrophages to Non-Bilayer Phospholipid Arrangements in a Lupus-like Mouse Model
by Iván Galarce-Sosa, Albany Reséndiz-Mora, Rodrigo Ramos-Monteagudo, Giovanna Barrera-Aveleida, José Rundquist-Sánchez, Saúl Gómez-Manzo, Isabel Wong-Baeza, Carlos Wong-Baeza and Isabel Baeza
Int. J. Mol. Sci. 2025, 26(17), 8680; https://doi.org/10.3390/ijms26178680 - 5 Sep 2025
Viewed by 313
Abstract
Anti-lipid autoantibodies are produced in systemic lupus erythematosus (SLE). These antibodies are associated with clinical manifestations of the disease, such as thrombosis, cardiovascular events, and neurological disorders. However, the cellular and molecular mechanisms that lead to the production of these antibodies are not [...] Read more.
Anti-lipid autoantibodies are produced in systemic lupus erythematosus (SLE). These antibodies are associated with clinical manifestations of the disease, such as thrombosis, cardiovascular events, and neurological disorders. However, the cellular and molecular mechanisms that lead to the production of these antibodies are not well known. We developed a mouse model of lupus by administering liposomes bearing non-bilayer phospholipid arrangements (NPA) stabilized by chlorpromazine. These mice produce anti-NPA antibodies that trigger a lupus-like disease. In previous studies, we demonstrated that these antibodies are primarily produced by germinal centers and that NK1.1+ CD4+ T cells provide help to B cells, enabling them to produce these IgG antibodies. However, additional immune cells may contribute to the production of these antibodies. Therefore, in this work, we analyzed the in vivo responses of γδ T cells and macrophages in this mouse model. We found that γδ T cells from mice that produce anti-NPA antibodies produce IFNγ and IL-17, which can contribute to B cell class switching and production of anti-NPA IgG antibodies via germinal centers. Additionally, we found that macrophages are polarized into a proinflammatory M1 phenotype and produce IL-6 that can exacerbate inflammation and potentially lead to autoimmunity. Full article
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16 pages, 2255 KB  
Article
Qualitative Evaluation of Binding States of Lipid Membranes to Mesoporous Silica Microspheres via Single-Particle Inductively Coupled Plasma Mass Spectrometry
by Shin-ichi Miyashita, Toshihiko Ogura, Shun-ichi Matsuura, Toshiyuki Takagi and Eriko Fukuda
Molecules 2025, 30(17), 3621; https://doi.org/10.3390/molecules30173621 - 4 Sep 2025
Viewed by 348
Abstract
Single-particle inductively coupled plasma mass spectrometry (spICP-MS) offers the unprecedented advantage of sensitive and selective detection of individual particles based on their constituent elements. It has been applied to the qualitative/quantitative evaluation of nonporous/mesoporous particles ranging from the nanoscale to the microscale and, [...] Read more.
Single-particle inductively coupled plasma mass spectrometry (spICP-MS) offers the unprecedented advantage of sensitive and selective detection of individual particles based on their constituent elements. It has been applied to the qualitative/quantitative evaluation of nonporous/mesoporous particles ranging from the nanoscale to the microscale and, recently, targeted proteins bound to particles. However, lipid membranes bound to particles have not been explored as potential targets for spICP-MS, despite its analytical potential. To address this, we investigated the applicability of spICP-MS for evaluating the binding states of two different types of lipid membranes (liposomes, i.e., phospholipid bilayer-based spherical vesicles, and nanodiscs comprising a disc-shaped phospholipid bilayer and membrane scaffold protein) to mesoporous silica microspheres (SBA24). The presence of bound liposomes and nanodiscs was confirmed using spICP-MS, which selectively monitored the derived P as a marker element. The presence of bound liposomes was confirmed by confocal laser Raman microscopy. Our findings demonstrate that spICP-MS can be used to qualitatively evaluate the binding states of lipid membranes to mesoporous SiO2 microspheres. This method offers a new platform for evaluating the effectiveness of particles as carriers of biomolecules (lipid membranes) and provides valuable insights into biomedical research and quality control in related industries. Full article
(This article belongs to the Special Issue Analytical Chemistry in Asia, 2nd Edition)
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26 pages, 3958 KB  
Article
Nebulized Bacterioruberin/Astaxanthin-Loaded Nanovesicles: Antitumoral Activity and Beyond
by Victoria Rebeca Dana González Epelboim, Diego G. Lamas, Cristián Huck-Iriart, Ezequiel Nicolas Caputo, Maria Julia Altube, Horacio Emanuel Jerez, Yamila Roxana Simioni, Kajal Ghosal, Maria Jose Morilla, Leticia Herminia Higa and Eder Lilia Romero
Int. J. Mol. Sci. 2025, 26(17), 8607; https://doi.org/10.3390/ijms26178607 - 4 Sep 2025
Viewed by 299
Abstract
The membranes of halophilic archaea are a source of novel biomaterials, mainly of isoprenoid nature, with therapeutic properties practically unraveled. Here, we explored the antitumoral activity of neutral archaeolipids (NAs, such as bacterioruberin, astaxanthin, and dihydrosqualene) present in the total archaeolipids (TAs) (a [...] Read more.
The membranes of halophilic archaea are a source of novel biomaterials, mainly of isoprenoid nature, with therapeutic properties practically unraveled. Here, we explored the antitumoral activity of neutral archaeolipids (NAs, such as bacterioruberin, astaxanthin, and dihydrosqualene) present in the total archaeolipids (TAs) (a fraction from the first step of lipid extraction by the modified Blight and Dyer technique) extracted from halophilic archaea Halorubrum tebenquichense, and formulated as TA-nanoarchaeosomes (TA: polar archaeolipids (PAs): Tween 80, 5:5:4 w:w:w, TA-nanoARC). The structure of 300.3 ± 84.2 nm TA-nanoARC of 0.59 ± 0.12 polydispersity index and −20 ± 3.7 mV ζ potential as determined by SAXS modelling, revealed that NA reduced the hydrophobic core and enlarged its hydrophilic section in comparison to TA-lacking bilayers (nanoARC), while preserving the width (~50 Å) and unilamellarity. Stable to storage and nebulization, TA-nanoARC was cytotoxic on A549 cells after 48 h, with an IC50 expressed as [bacterioruberin] of 0.15 μg/mL (~0.20 µM), comparable to or lower than the IC50 of docetaxel or cisplatin. Such cytotoxicity was exerted at a concentration harmless to macrophages (mTHP-1 cells). Besides, the conditioned medium from TA-nanoARC nebulized on A549 cells reduced the expression of the CD204/SRA-1, an M2 phenotype marker, and induced pro-inflammatory activity, comparable to or to a greater extent than that induced by lipopolysaccharide, including IL-6 and TNF-α, in mTHP-1 as a model of tumor-associated macrophages. The endocytosis of TA-nanoARC by A549 cells induced Lysotracker red fluorescence to fade and blur. This suggested the internalization of the highly viscous and ordered TA-nanoARC rich in NAs and subsequent lysosomal dysfunction (and not its antioxidant activity), as responsible for the selective damage on A549 cells. These are the first results showing that nebulized TA-nanoARC, lethal to A549 cells and modulating mTHP-1 cell phenotype, may act as antitumorals in the absence of cytotoxic drugs. Full article
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15 pages, 5277 KB  
Article
Application of the Transition State Theory in the Study of the Osmotic Permeabilities of AQP7, AQP10 and GlpF
by Ruth Chan and Liao Y. Chen
Membranes 2025, 15(9), 265; https://doi.org/10.3390/membranes15090265 - 2 Sep 2025
Viewed by 285
Abstract
Aquaglyceroporins, including human AQP7, AQP10, and E. coli GlpF, are known to facilitate movements of glycerol, water, and some other uncharged molecules across the cell membrane. In this study we focused on the transport of water molecules in the absence of glycerol for [...] Read more.
Aquaglyceroporins, including human AQP7, AQP10, and E. coli GlpF, are known to facilitate movements of glycerol, water, and some other uncharged molecules across the cell membrane. In this study we focused on the transport of water molecules in the absence of glycerol for AQP7, AQP10 and GlpF using the Transition State Theory for the novel application of permeability and kinetics studies. We conducted around 500 ns of in silico simulations of the aquaglyceroporins embedded in lipid bilayer membranes with intracellular-extracellular asymmetries in leaflet lipid compositions. For the water permeability analysis, we computed the transition rate constant with correction for recrossing events where the water molecules do not completely traverse the protein channel from one side of the membrane to the other side. We also studied the hydrogen bond distributions of the single-file waters and channel residues and linear water densities along the pores of the aquaglyceroporins. Interestingly, we found that there was an inverse correlation between the number of single-file water molecules in the channel and osmotic permeability. Full article
(This article belongs to the Special Issue Composition and Biophysical Properties of Lipid Membranes)
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19 pages, 1749 KB  
Article
A Pre-Formulation Study for Delivering Nucleic Acids as a Possible Gene Therapy Approach for Spinocerebellar Ataxia Disorders
by Francesca Ferrara, Alfredo Sepe, Maddalena Sguizzato, Peggy Marconi and Rita Cortesi
Molecules 2025, 30(17), 3585; https://doi.org/10.3390/molecules30173585 - 2 Sep 2025
Viewed by 415
Abstract
Liposomes are lipid bilayer vesicles that are highly biocompatible, able to interact with the cell membrane, and able to release their cargo easily. The improvement of the physicochemical properties of liposomes, such as surface charge, lipid composition, and functionalization, makes these vesicles eligible [...] Read more.
Liposomes are lipid bilayer vesicles that are highly biocompatible, able to interact with the cell membrane, and able to release their cargo easily. The improvement of the physicochemical properties of liposomes, such as surface charge, lipid composition, and functionalization, makes these vesicles eligible delivery nanosystems for the gene therapy of many pathological conditions. In the present study, pre-formulation analysis was conducted to develop liposomes that facilitate the delivery of nucleic acids to neuronal cells, with the aim of future delivery of a CRISPR/Cas9 system designed to silence genes responsible for autosomal dominant neurodegenerative disorders. To this aim, different nucleic acid cargo models, including λ phage DNA, plasmid DNA, and mRNA encoding GFP, were considered. Liposomes with varying lipid compositions were produced using the ethanol injection method and analyzed for their dimensional stability and ability to interact with DNA. The selected formulations were tested in vitro using a neuroblastoma cell line (SH-SY5Y) to evaluate their potential toxicity and the ability to transfect cells with a DNA encoding the green fluorescent protein (pCMV-GFP). Among all formulations, the one containing phosphatidylcholine, phosphatidylethanolamine, pegylated 1,2-distearoyl-sn-glycero-3-phosphethanolamine, cholesterol, and dioctadecyl-dimethyl ammonium chloride (in the molar ratio 1:2:4:2:2) demonstrated the highest efficiency in mRNA delivery. Although this study was designed with the goal of ultimately enabling the delivery of a CRISPR/Cas9 system for treating autosomal dominant neurodegenerative disorders such as polyglutamine spinocerebellar ataxias (SCAs), CRISPR/Cas9 components were not delivered in the present work, and their application remains the objective of future investigations. Full article
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16 pages, 1469 KB  
Article
Membrane-Active Phenolic Compounds from Cephalaria uralensis (Murray) Roem. & Schult.: Isolation, Structural Characterization, and Antioxidant Potential
by Anna Berecka-Rycerz, Małgorzata Chrząszcz-Wróbel, Arkadiusz Paweł Matwijczuk, Piotr Hołowiński, Sebastian Granica and Katarzyna Dos Santos Szewczyk
Appl. Sci. 2025, 15(17), 9585; https://doi.org/10.3390/app15179585 - 30 Aug 2025
Viewed by 306
Abstract
In this study, we isolated and identified six major phenolic constituents from Cephalaria uralensis. The compounds—quercetin 6-C-β-glucopyranoside, isoorientin, swertiajaponin, 3,5-dicaffeoylquinic acid, 4,5-dicaffeoylquinic acid, and chlorogenic acid—were characterized by LC–MS and NMR. All isolates exhibited strong free-radical scavenging ability [...] Read more.
In this study, we isolated and identified six major phenolic constituents from Cephalaria uralensis. The compounds—quercetin 6-C-β-glucopyranoside, isoorientin, swertiajaponin, 3,5-dicaffeoylquinic acid, 4,5-dicaffeoylquinic acid, and chlorogenic acid—were characterized by LC–MS and NMR. All isolates exhibited strong free-radical scavenging ability and significant interaction with lipid monolayers (Δπ up to ~6.5–7 mN/m), suggesting dual antioxidant and membrane-perturbing activities. In antioxidant assays, isoorientin, showed the lowest IC50 among the isolates. Notably, 4,5-dicaffeoylquinic acid caused the largest increase in monolayer surface pressure, indicating a particularly strong tendency to integrate with lipid bilayers. In fact, chlorogenic acid, isoorientin, and swertiajaponin are well-documented natural antioxidants, and related phenolic acids have been shown to possess potent antimicrobial activity. Thus, the C. uralensis phenolics identified in our study likely underlie the extract’s bioactivity. These findings highlight C. uralensis as a source of membrane-active polyphenols with potential applications in skin-related oxidative and microbial conditions. Full article
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23 pages, 1215 KB  
Review
Extracellular Vesicles as Mediators of Intercellular Communication: Implications for Drug Discovery and Targeted Therapies
by Mst. Afsana Mimi and Md. Mahmudul Hasan
Future Pharmacol. 2025, 5(3), 48; https://doi.org/10.3390/futurepharmacol5030048 - 30 Aug 2025
Viewed by 251
Abstract
Extracellular vesicles (EVs) are mediators of intercellular communication and serve as promising tools for drug discovery and targeted therapies. These lipid bilayer-bound nanovesicles facilitate the transfer of functional proteins, RNAs, lipids, and other biomolecules between cells, thereby influencing various physiological and pathological processes. [...] Read more.
Extracellular vesicles (EVs) are mediators of intercellular communication and serve as promising tools for drug discovery and targeted therapies. These lipid bilayer-bound nanovesicles facilitate the transfer of functional proteins, RNAs, lipids, and other biomolecules between cells, thereby influencing various physiological and pathological processes. This review outlines the molecular mechanisms governing EV biogenesis and cargo sorting, emphasizing the role of key regulatory proteins in modulating selective protein packaging. We explore the critical involvement of EVs in various disease microenvironments, including cancer progression, neurodegeneration, and immunological modulation. Their ability to cross biological barriers and deliver bioactive cargo makes them desirable candidates for precise drug delivery systems, especially in neurological and oncological disorders. Moreover, this review highlights advances in engineering EVs for the delivery of RNA therapeutics, CRISPR-Cas systems, and targeted small molecules. The utility of EVs as diagnostic tools in liquid biopsies and their integration into personalized medicine and companion diagnostics are also discussed. Patient-derived EVs offer dynamic insights into disease states and enable real-time treatment stratification. Despite their potential, challenges such as scalable isolation, cargo heterogeneity, and regulatory ambiguity remain significant hurdles. Recent studies have reported novel pharmacological approaches targeting EV biogenesis, secretion, and uptake pathways, with emerging regulators showing promise as drug targets for modulating EV cargo. Future directions include the standardization of EV analytics, scalable biomanufacturing, and the classification of EV-based therapeutics under evolving regulatory frameworks. This review emphasizes the multifaceted roles of EVs and their transformative potential as therapeutic platforms and biomarker reservoirs in next-generation precision medicine. Full article
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37 pages, 24408 KB  
Review
Molecular Dynamics Simulations of Liposomes: Structure, Dynamics, and Applications
by Ehsan Khodadadi, Ehsaneh Khodadadi, Parth Chaturvedi and Mahmoud Moradi
Membranes 2025, 15(9), 259; https://doi.org/10.3390/membranes15090259 - 29 Aug 2025
Viewed by 495
Abstract
Liposomes are nanoscale, spherical vesicles composed of phospholipid bilayers, typically ranging from 50 to 200 nm in diameter. Their unique ability to encapsulate both hydrophilic and hydrophobic molecules makes them powerful nanocarriers for drug delivery, diagnostics, and vaccine formulations. Several FDA-approved formulations such [...] Read more.
Liposomes are nanoscale, spherical vesicles composed of phospholipid bilayers, typically ranging from 50 to 200 nm in diameter. Their unique ability to encapsulate both hydrophilic and hydrophobic molecules makes them powerful nanocarriers for drug delivery, diagnostics, and vaccine formulations. Several FDA-approved formulations such as Doxil® (Baxter Healthcare Corporation, Deerfield, IL, USA), AmBisome® (Gilead Sciences, Inc., Foster City, CA, USA), and Onivyde® (Ipsen Biopharmaceuticals, Inc., Basking Ridge, NJ, USA) highlight their clinical significance. This review provides a comprehensive synthesis of how molecular dynamics (MD) simulations, particularly coarse-grained (CG) and atomistic approaches, advance our understanding of liposomal membranes. We explore key membrane biophysical properties, including area per lipid (APL), bilayer thickness, segmental order parameter (SCD), radial distribution functions (RDFs), bending modulus, and flip-flop dynamics, and examine how these are modulated by cholesterol concentration, PEGylation, and curvature. Special attention is given to curvature-induced effects in spherical vesicles, such as lipid asymmetry, interleaflet coupling, and stress gradients across the leaflets. We discuss recent developments in vesicle modeling using tools such as TS2CG, CHARMM-GUI Martini Maker, and Packmol, which have enabled the simulation of large-scale, compositionally heterogeneous systems. The review also highlights simulation-guided strategies for designing stealth liposomes, tuning membrane permeability, and enhancing structural stability under physiological conditions. A range of CG force fields, MARTINI, SPICA, SIRAH, ELBA, SDK, as well as emerging machine learning (ML)-based models, are critically assessed for their strengths and limitations. Despite the efficiency of CG models, challenges remain in capturing long-timescale events and atomistic-level interactions, driving the development of hybrid multiscale frameworks and AI-integrated techniques. By bridging experimental findings with in silico insights, MD simulations continue to play a pivotal role in the rational design of next-generation liposomal therapeutics. Full article
(This article belongs to the Collection Feature Papers in 'Membrane Physics and Theory')
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25 pages, 6013 KB  
Article
Development and Application of a Novel pH-Responsive Bilayer Indicator Film for Yellowfin Seabream Preservation and Freshness Monitoring
by Shan Xue, Zhi Lin and Jia Liu
Foods 2025, 14(17), 3019; https://doi.org/10.3390/foods14173019 - 28 Aug 2025
Viewed by 497
Abstract
A pH-responsive bilayer film was developed for real-time freshness monitoring and preservation of yellowfin seabream. The emulsified layer contained chitosan (CS) and flaxseed oil (FO), while the indicator layer comprised carrageenan (CAR), gelatin (GEL), grape seed anthocyanins (GSA), and curcumin (CUR). Optimization via [...] Read more.
A pH-responsive bilayer film was developed for real-time freshness monitoring and preservation of yellowfin seabream. The emulsified layer contained chitosan (CS) and flaxseed oil (FO), while the indicator layer comprised carrageenan (CAR), gelatin (GEL), grape seed anthocyanins (GSA), and curcumin (CUR). Optimization via response surface methodology determined the ideal formulation: CAR/GEL mass ratio 1.11:1, CS concentration 1.70%, and GSA/CUR dosage 53.99 mg/100 mL. The optimized film demonstrated superior mechanical properties (TS = 12.74 MPa, EAB = 68.24%), enhanced hydrophobicity (WVP = 1.21 × 10−11 g·m−1·s−1·Pa−1), and potent antioxidant activity (HRC = 92.35%). FTIR and SEM confirmed stable cross-linking and bilayer compatibility. Distinct color transitions (yellow → reddish-brown) occurred at different pH levels, correlating with fish spoilage indicators. During 25°C storage, the film effectively inhibited quality deterioration (TVB-N, TBARS, moisture loss, lipid oxidation) while extending shelf-life. Strong correlations were observed among TVB-N, TBARS, moisture (|r| > 0.97), and PUFAs’ spoilage contribution (r ≈ −0.99). This intelligent film enables dual-functionality: active preservation and visual freshness monitoring. Full article
(This article belongs to the Special Issue Biosynthesis Technology and Future Functional Foods)
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12 pages, 891 KB  
Communication
Development of a QCM-D-Based Aptasensor for the Real-Time Detection of β-Lactoglobulin
by Tuba Çanak-Ipek, Melis Güler Girbas, Nicolas Casadei, Christian Schlensak, Anna-Kristina Marel and Meltem Avci-Adali
Biosensors 2025, 15(9), 563; https://doi.org/10.3390/bios15090563 - 27 Aug 2025
Viewed by 471
Abstract
The prevalence of food allergies has been steadily increasing in recent years. β-lactoglobulin (β-LG), the main allergenic protein of milk and dairy allergies, is more commonly observed in infants and children. In this study, a β-LG-specific aptamer was selected using the combinatorial chemistry [...] Read more.
The prevalence of food allergies has been steadily increasing in recent years. β-lactoglobulin (β-LG), the main allergenic protein of milk and dairy allergies, is more commonly observed in infants and children. In this study, a β-LG-specific aptamer was selected using the combinatorial chemistry process known as systematic evolution of ligands by exponential enrichment (SELEX), and a quartz crystal microbalance with dissipation monitoring (QCM-D)-based aptasensor was developed using a novel surface functionalization technique, which mimics an artificial cell membrane on the QCM-D sensor surface, creating a physiologically relevant environment for the binding of the target to the sensor. Through SELEX combined with next-generation sequencing (NGS), the aptamer Apt 356 was identified. Its binding to β-LG was confirmed via dot blot analysis. The selected Apt 356 was then used for the development of a QCM-D-based sensor. To fabricate the sensor, the quartz surface was functionalized with a supported lipid bilayer (SLB). The β-LG-specific aptamer was immobilized onto this SLB. The results demonstrated that the QCM-D system allows real-time observation and evaluation of the binding of β-LG. While there have been some studies on aptasensors for the β-LG protein, to the best of our knowledge, this is the first QCM-D-based aptasensor developed specifically for β-LG protein detection. Full article
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32 pages, 10888 KB  
Review
Central Nervous System-Derived Extracellular Vesicles as Biomarkers in Alzheimer’s Disease
by Yiru Yu, Zhen Wang, Zhen Chai, Shuyu Ma, Ang Li and Ye Li
Int. J. Mol. Sci. 2025, 26(17), 8272; https://doi.org/10.3390/ijms26178272 - 26 Aug 2025
Viewed by 607
Abstract
Alzheimer’s disease (AD) has emerged as a global health threat that demands early detection to seize the optimal intervention opportunity. Central nervous system (CNS)-derived extracellular vesicles (EVs), lipid-bilayer nanoparticles released by CNS cells, carry key biomolecules involved in AD pathology, positioning them as [...] Read more.
Alzheimer’s disease (AD) has emerged as a global health threat that demands early detection to seize the optimal intervention opportunity. Central nervous system (CNS)-derived extracellular vesicles (EVs), lipid-bilayer nanoparticles released by CNS cells, carry key biomolecules involved in AD pathology, positioning them as a promising source of biomarkers for early detection. Current breakthroughs in EV-based isolation and detection technologies have opened up the possibility of early, accurate AD diagnosis. This review summarizes their multifaceted roles in AD pathogenesis, including amyloid-β (Aβ) aggregation, tau propagation, neuroinflammation, and synaptic dysfunction, and highlights neuron- and glia-derived EV biomarkers with translational potential. We further outline recent advances in EV isolation techniques—including density-, size-, charge/dielectric-, immunoaffinity-, and acoustics-based approaches—and emerging detection platforms such as fluorescence, surface plasmon resonance (SPR), surface-enhanced Raman spectroscopy (SERS), electrochemical, and nanomechanical sensors for sensitive, multiplex AD diagnostics. Finally, we discuss key challenges, including standardization, sensitivity, and high-throughput adaptation, and explore future directions such as automated microfluidics and single-vesicle analysis. CNS-derived EVs hold significant promise as minimally invasive, next-generation tools for early AD detection and precision medicine. Full article
(This article belongs to the Section Molecular Neurobiology)
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16 pages, 5759 KB  
Article
Mechanisms of Self-Assembly of Giant Unilamellar Vesicles in the Army Liposome Formulation (ALF) Family of Vaccine Adjuvants
by Calin Nicolescu, Essie Komla, Mangala Rao, Gary R. Matyas and Carl R. Alving
Pharmaceutics 2025, 17(9), 1092; https://doi.org/10.3390/pharmaceutics17091092 - 22 Aug 2025
Viewed by 510
Abstract
Background/Objectives: Army Liposome Formulation with QS21 (ALFQ) is a vaccine adjuvant formulation consisting of liposomes that contain saturated zwitterionic and anionic phospholipids, 55 mol% cholesterol, and small molar amounts of monophosphoryl lipid A (MPLA) and QS21 saponin as adjuvants. A unique aspect of [...] Read more.
Background/Objectives: Army Liposome Formulation with QS21 (ALFQ) is a vaccine adjuvant formulation consisting of liposomes that contain saturated zwitterionic and anionic phospholipids, 55 mol% cholesterol, and small molar amounts of monophosphoryl lipid A (MPLA) and QS21 saponin as adjuvants. A unique aspect of ALFQ is that after addition of QS21 to nanoliposomes (<100 nm), the liposomes self-assemble through fusion to form giant (≥1000 nm) unilamellar vesicles (GUVs). The purpose of this study was to introduce and investigate new intermediate structures in the fusion process that we term tethered incomplete microspheres (TIMs), which were discovered by us incidentally as structures that were visible by phase contrast microscopy. Methods: Differential centrifugation; phase contrast microscopy; confocal microscopy of vesicles or TIMs which contain fluorescent chromophores linked to phospholipids or cholesterol; ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) analysis of lipid components of liposomes and TIMs; and dynamic light scattering were all used for the characterization of TIMS. Results and Conclusions: (A) Sizes of TIMs range from overall aggregated structural sizes of ~1 µm to mega sizes of ≥200 µm. (B) Stable TIM structures occur when a fusion process is stopped by depletion of a fusogenic lipid during an evolving fusing of a lipid bilayer membrane. (C) TIMs consist of long-term stable (>2 years), but also metastable, tightly aggregated tear-drop or spherical incomplete GUVs tethered to visible masses of underlying vesicles that are not individually visible. (D) The TIMs and GUVs all contain phospholipid and cholesterol (when present) as bulk lipids. (E) Lyophilized liposomes lacking QS21 saponin, but which still contain MPLA (ALF55lyo), also self-assemble to form GUVs and TIMs. (F) Cholesterol is a required component in nanoliposomes for generation of GUVs and TIMs by addition of QS21. (G) Cholesterol is not required for production of GUVs and TIMs in ALFlyo, but cholesterol greatly reduces and narrows the polydisperse vesicle distribution. Full article
(This article belongs to the Special Issue Advanced Liposomes for Drug Delivery, 2nd Edition)
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27 pages, 608 KB  
Review
Circulating Extracellular Vesicle-Based Biomarkers: Advances, Clinical Implications and Challenges in Coronary Artery Disease
by Valeria Carcia, Alessandro Vincenzo De Salve, Chiara Nonno and Maria Felice Brizzi
Int. J. Transl. Med. 2025, 5(3), 39; https://doi.org/10.3390/ijtm5030039 - 22 Aug 2025
Viewed by 480
Abstract
Coronary artery disease (CAD) is a leading cause of death worldwide, encompassing a broad spectrum of pathological conditions ranging from chronic to acute coronary syndromes. It underlies complex biological mechanisms, among which an emerging role is played by extracellular vesicles (EVs). EVs are [...] Read more.
Coronary artery disease (CAD) is a leading cause of death worldwide, encompassing a broad spectrum of pathological conditions ranging from chronic to acute coronary syndromes. It underlies complex biological mechanisms, among which an emerging role is played by extracellular vesicles (EVs). EVs are non-replicable cell-derived particles enclosed by lipid bilayers acting as mediators of cellular interactions. In the past two decades, there has been a growing interest in EVs as potential diagnostic, prognostic and therapeutic tools in cardiovascular disease. We reviewed the most recent studies on circulating EVs in CAD with a particular focus on their role in biomarker discovery. Our aim was to evaluate the feasibility of translating these findings into routine clinical practice. To this end, we underlie the development and application of integrated indicators, referred to as “Bioscores”, which combine clinical, laboratory, and molecular data to enhance diagnostic and prognostic accuracy. We briefly discuss the opportunity and pitfalls related to the emerging use of Machine Learning (ML) algorithms. Moreover, we highlight that further investigation of mechanistic pathways is required beyond the initially predicted associations generated by in silico studies. Finally, we analyzed the key limitations, challenges, and unmet needs in the field, including small and unrepresentative sample sizes, a lack of external validation, overlapping and often contradictory effects on targeted pathways, difficulties in standardizing EV isolation and characterization methods, as well as concerns regarding affordability and clinical reliability. Full article
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17 pages, 2122 KB  
Article
Membrane Stress Enhances Specific PQS–Lipid Interactions That Drive Bacterial Outer Membrane Vesicle Biogenesis
by Citrupa Gopal, Hasan Al Tarify, Emad Pirhadi, Eliza G. O’Brien, Anuradha Dagar, Xin Yong and Jeffrey W. Schertzer
Membranes 2025, 15(8), 247; https://doi.org/10.3390/membranes15080247 - 13 Aug 2025
Viewed by 670
Abstract
Gram-negative bacteria use outer membrane vesicles (OMVs) for toxin trafficking, immune interference, horizontal gene transfer, antibiotic protection, and cell–cell communication. Despite their direct contribution to many pathogenesis-related behaviors, our understanding of how OMVs are produced remains surprisingly incomplete. The Bilayer Couple model describes [...] Read more.
Gram-negative bacteria use outer membrane vesicles (OMVs) for toxin trafficking, immune interference, horizontal gene transfer, antibiotic protection, and cell–cell communication. Despite their direct contribution to many pathogenesis-related behaviors, our understanding of how OMVs are produced remains surprisingly incomplete. The Bilayer Couple model describes the induction of OMV formation resulting from the preferential accumulation of small molecules in the outer leaflet of the membrane, resulting in leaflet expansion and membrane bending. Previous work has highlighted the importance of the structure of the Pseudomonas Quinolone Signal (PQS) in driving OMV formation, but the nature of interactions with membrane lipids remains unclear. Our recent in silico analysis suggested that a new interaction, between the PQS ring nitrogen and Lipid A, is critical for PQS function. Here, we used chemical analogs to interrogate the importance of specific PQS functional groups in its ability to stimulate OMV biogenesis. We demonstrated that OMV induction requires the presence of all PQS functional groups together. Further modeling uncovered that PQS prefers interaction with the outer leaflet of the membrane, consistent with its unique ability to drive OMV biogenesis. This was explained by much greater hydrogen bond formation between PQS and Lipid A. Interestingly, the preference of PQS for the outer leaflet coincided with that leaflet becoming crowded. Thus, the initial insertion of PQS into the outer leaflet would be expected to encourage local accumulation of more PQS to drive the induction of membrane curvature and subsequent OMV formation. Full article
(This article belongs to the Section Biological Membranes)
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22 pages, 3081 KB  
Article
Elucidating the Complex Structural and Molecular Mechanisms Driving P-Glycoprotein-Mediated Transport of Cardiac Glycosides
by Rohit Katti, Amanda M. Kozarich, Gershon A. K. Mensah and Michael G. Bartlett
Int. J. Mol. Sci. 2025, 26(16), 7813; https://doi.org/10.3390/ijms26167813 - 13 Aug 2025
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Abstract
P-glycoprotein (Pgp) plays a significant role in the disposition of cardiac glycoside (CG) drugs across the cell membrane. The relatively narrow therapeutic indices of these drugs, coupled with the co-administration of drugs that inhibit Pgp’s transport mechanism, often cause an increased level of [...] Read more.
P-glycoprotein (Pgp) plays a significant role in the disposition of cardiac glycoside (CG) drugs across the cell membrane. The relatively narrow therapeutic indices of these drugs, coupled with the co-administration of drugs that inhibit Pgp’s transport mechanism, often cause an increased level of CG in the patient’s plasma, resulting in fatal arrhythmia. Therefore, understanding the underlying mechanism of the CG–Pgp interaction is necessary to circumvent Pgp-mediated transport and effectively design next-generation CGs. In this study, we conducted a comparative analysis to examine the interaction with Pgp and further understand the Pgp-mediated transport of digoxin, digitoxin, digoxigenin, and digitoxigenin. Through the drug-induced kinetic studies of Pgp, our findings suggest that each of the four drugs tested has a single binding site within Pgp. The CG–Pgp binding studies demonstrated that digoxin, digitoxin, and digoxigenin had relatively higher binding affinities. The CG-mediated conformational changes in Pgp indicated that each of the drugs shifts Pgp to an “outward-open” conformation in a nucleotide-dependent manner. STDD NMR indicated that the protons within the δ-lactone ring and the tri-D-digitoxose sugar moieties (glycones) predominantly interact with Pgp. Finally, a model was proposed for CG-induced Pgp-mediated ATP hydrolysis and transport by integrating our data with previously published Pgp-mediated CG transport results. Full article
(This article belongs to the Section Molecular Biophysics)
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