Search Results (3,068)

Rising atmospheric CO₂ is expected to fertilize forest photosynthesis; yet, ecosystem-scale observations often reveal muted responses, creating a critical knowledge gap in global climate projections. In this review, we explore this paradox by moving beyond the traditional ‘CO₂ fertilization’ paradigm. We propose an integrated framework that positions elevated CO₂ as a complex modulator whose net effect is determined by a hierarchy of cross-scale constraints. At the plant level, photosynthetic acclimation acts as a universal first brake on the initial biochemical potential. At the ecosystem level, nutrient availability—primarily nitrogen in temperate/boreal systems and phosphorus in the tropics—emerges as the dominant bottleneck limiting long-term productivity gains. Furthermore, interactions with the water cycle, such as increased water-use efficiency, create state-dependent dynamic responses. By synthesizing evidence from pivotal Free-Air CO₂ Enrichment (FACE) experiments, we systematically evaluate these constraining factors. We conclude that accurately predicting the future of the forest carbon sink necessitates a paradigm shift: from single-factor analysis to multi-stressor approaches, and from ecosystem-scale observations to an integrated understanding that links these phenomena to their underlying molecular and genetic mechanisms. This review provides a roadmap for future research and informs more realistic strategies for forest management and climate mitigation in a high-CO₂ world. Full article

To address the issues of zero-valent iron Fe(0) passivation and limited nitrogen and phosphorus removal in constructed wetlands (CWs), this study investigated the enhancement effect of two carbon materials—activated carbon (AC) obtained through high-temperature pyrolysis and biochar (BC) obtained through low-temperature pyrolysis—when coupled with Fe(0). Four systems were set up: control (CW-C), Fe(0) alone (CW-Fe), Fe(0) with AC (CW-FeAC), and Fe(0) with BC (CW-FeBC). Evaluations covered wastewater treatment performance, microbial community structure, and functional gene abundance. Results showed that iron–carbon coupling significantly improved nitrogen and phosphorus removal, with the CW-FeAC system performing best, achieving 58% total nitrogen (TN) and 90% total phosphorus (TP) removal. This enhancement was attributed to AC’s high conductivity, which strengthened iron–carbon micro-electrolysis, accelerated Fe(0) corrosion, and enabled continuous Fe²⁺/Fe³⁺ release, supplying electrons for denitrification and phosphorus precipitation. Microbial analysis indicated that iron–carbon coupling markedly reshaped community structure, enriching key genera such as Thiobacillus (33.8%) and Geobacter (12.5%) in CW-FeAC. Functional gene analysis further confirmed higher abundances of denitrification (napA/narG→nirS→nosZ) and iron metabolism genes (feoA/feoB), suggesting enhanced nitrogen-iron cycling. This study clarifies the mechanisms by which iron–carbon coupling improves nitrogen and phosphorus performance in CWs and highlights the superiority of AC over BC in facilitating electron transfer and functional microorganism enrichment, providing a basis for the design of enhanced CW systems treating low-carbon-nitrogen-ratio wastewater, such as secondary effluent or lightly polluted surface water. Full article

Heavy metal (HM) contamination in agricultural soils poses a significant threat to soil health and plant productivity. This study investigates the impact of cadmium (Cd) and zinc (Zn) stress on tomato plants (Solanum lycopersicum) and explores the mitigation potential of microbial biostimulants (MBs), including arbuscular mycorrhizal fungi (AMF) and Pseudomonas fluorescens So_08 (PGPR), over a 52-day period using multi-omics approaches. Root exudate profiling revealed distinct metabolic changes under HM stress, which compromised soil–plant interactions. Cd stress reduced the secretion of phenylpropanoids (sum LogFC: −45.18), lipids (sum LogFC: −27.67), and isoprenoids (sum LogFC: −11–67), key metabolites in antioxidative defense, while also suppressing rhizosphere fungal populations. Conversely, Zn stress enhanced lipid exudation (such as sphingolipids and sterols, as sum LogFC of 8.72 and 9.99, respectively) to maintain membrane integrity and reshaped rhizobacterial communities. The MBs application mitigated HM-induced stress by enhancing specialized metabolite syntheses, including cinnamic acids, terpenoids, and flavonoids, which promoted crop resilience. MBs also reshaped microbial diversity, fostering beneficial species like Portibacter spp., Alkalitalea saponilacus under Cd stress, and stimulating rhizobacteria like Aggregatilinea spp. under Zn stress. Specifically, under Cd stress, bacterial diversity remained relatively stable, suggesting their resilience to Cd. However, fungal communities exhibited greater sensitivity, with a decline in diversity in Cd-treated soils and partial recovery when MBs were applied. Conversely, Zn stress caused decline in bacterial α-diversity, while fungal diversity was maintained, indicating that Zn acts as an ecological filter that suppresses sensitive bacterial taxa and favors Zn-tolerant fungal species. Multi-omics data integration combined with network analysis highlighted key features associated with improved nutrient availability and reduced HM toxicity under MB treatments, including metabolites and microbial taxa linked to sulfur cycling, nitrogen metabolism, and iron reduction pathways. These findings demonstrate that MBs can modulate plant metabolic responses and restore rhizosphere microbial communities under Cd and Zn stress, with PGPR showing broader metabolomic recovery effects and AMF influencing specific metabolite pathways. This study provides new insights into plant–microbe interactions in HM-contaminated environments, supporting the potential application of biostimulants for sustainable soil remediation and plant health improvement. Full article

Compost amendments are widely recognized as an effective strategy for improving soil quality, modulating enzyme activities, and enhancing nitrogen cycling. Urease, a key enzyme in nitrogen transformation, is characterized by kinetic parameters such as the maximum reaction rate (V_max) and Michaelis constant (K_m), as well as thermodynamic attributes including temperature sensitivity (Q₁₀), activation energy (E_a), enthalpy change (ΔH), Gibbs free energy change (ΔG), and entropy change (ΔS). However, how different compost sources regulate urease kinetics, thermodynamics, and nitrogen availability remains poorly understood. In this study, we evaluated the effects of three compost amendments—mushroom residue (MR), mushroom residue–straw mixture (MSM), and leaf litter (LL)—on urease kinetics and thermodynamics in a temperate agroecosystem. The MSM treatment significantly enhanced urea hydrolysis capacity and catalytic efficiency. In contrast, LL treatment resulted in the highest Km value, indicating a substantially lower enzyme-substrate affinity. Furthermore, MSM reduced the E_a and increased the thermal stability of urease, thereby supporting enzymatic performance under fluctuating temperatures. Collectively, our findings highlight that compost composition is a critical determinant of urease function and nitrogen turnover. By elucidating the coupled kinetic and thermodynamic responses of urease to compost inputs, this study provides mechanistic insights to guide optimized soil management and sustainable nitrogen utilization in temperate agricultural systems. Full article

To elaborate on the effects of hydraulic projects and physicochemical factors on the spatiotemporal distribution of phytoplankton communities, we monitored the phytoplankton communities and related water parameters in the Ganjiang River’s main channel over a five-year period. The survey revealed 65 species across six phyla, with Chlorophyta, Cyanophyta and Bacillariophyta as the most diverse groups. Phytoplankton abundance and biomass exhibited significant seasonal variations (p < 0.001), peaking in summer and autumn and reaching their lowest values in winter and spring. Spatially, phytoplankton abundance and biomass were not significantly different (p > 0.05), the abundance and biomass of Cyanophyta were higher in the two reservoir areas compared to the upstream sampling points. This suggests that the hydraulic projects altered the river’s flow and velocity, which led to a succession in phytoplankton community composition. Correlation analysis showed a strong positive association between the abundance and biomass of both Cyanophyta and Chlorophyta and water temperature (p < 0.001), but showed a significant negative relationship with nitrogen (p < 0.05). In contrast, Bacillariophyta abundance and biomass were positively and significantly correlated with ammonium nitrogen (p < 0.05). Redundancy analysis confirmed that water temperature and nitrogen are the primary environmental variables influencing the phytoplankton community’s succession. The direct alteration of river hydrodynamic characteristics by hydraulic projects, coupled with the reservoir-induced water stratification and its influence on vertical water temperature distribution, ultimately results in the profound reshaping of the phytoplankton community structure through coupled effects with nitrogen cycling. The findings from this study can scientifically inform the ecological scheduling, water quality management and water supply security of the Ganjiang River basin’s cascade reservoirs. Full article

Soil nutrient imbalance and the decline of microbial diversity threaten the long-term sustainability of crop production in intensive agriculture. Organic fertilizers provide a promising means to improve soil–microbe–plant interactions, yet the combined effects of fertilizer type and application rate on soil function and crop productivity remain insufficiently understood. In this study, we investigated the agronomic and ecological responses of greenhouse tomato (Solanum lycopersicum L.) to three organic fertilizers—bone calcium fertilizer (BCF), bone mud fertilizer (BMF), and bio-organic fertilizer (BOF)—each applied at four rates (7500, 15,000, 30,000, and 45,000 kg·ha⁻¹). The highest tested BOF rate (45,000 kg·ha⁻¹) significantly increased net photosynthesis by 29.5%, stomatal conductance by 50.0%, and fruit yield by 40.8% compared with the unfertilized control. It also enhanced soil organic matter by 42.6% and total nitrogen by 82.0%, while increasing the relative abundance of Proteobacteria, a phylum closely associated with nutrient cycling and plant growth promotion. Network and path modeling revealed that changes in microbial diversity were positively associated with improved soil properties, which were subsequently linked to higher photosynthetic efficiency and yield formation, suggesting a potential microbiome-mediated pathway from fertilization to productivity. These effects were statistically consistent across measured endpoints. Our findings highlight that optimizing both the type and rate of organic fertilizer—particularly bio-organic fertilizer under greenhouse conditions—can enhance soil fertility, microbial function, and crop yield simultaneously. This study provides an evidence-based framework for precision fertilization strategies aimed at improving agroecosystem resilience and advancing sustainable tomato production. Full article

Long-term positioning tests can systematically reveal the evolution characteristics of soil fertility and crop productivity, and reflect the spatiotemporal changes in soil quality and their driving factors. While soil microorganisms mediating nutrient cycling are crucial for maintaining crop productivity and the long-term resilience of agricultural ecosystems, how prolonged use of different fertilization strategies affects their functional capacity remains insufficiently understood. In this study, we applied metagenomic sequencing to investigate how three fertilization treatments, namely (i) N0 receiving only phosphorus (P) and potassium (K) fertilizers, (ii) N250 receiving conventional urea + P and K, and (iii) F250 receiving humic acid urea + P and K, influence soil microbial communities, functional genes related to C and N cycling, and associated soil properties in a long-term field experiment. The F250 treatment significantly increased average annual yields of wheat and maize to 7166.21 kg hm⁻² and 8309.96 kg hm⁻², respectively. These values were 148.66% and 73.47% higher than those under N0, and 8.22% and 11.64% higher than those under N250. Compared with N0, both N250 and F250 signally augmented soil nitrate, ammonium, total nitrogen (TN), and soil organic carbon (SOC), altered microbial community composition, and enhanced the relative abundance of genes engaged in C fixation and methane oxidation. Both treatments also promoted denitrification and dissimilatory nitrate reduction to ammonium (DNRA). Relative to N250, F250 specifically enriched the beneficial bacterial genus Pedobacter, further increased the abundance of the C fixation gene pccA, and markedly upregulated the DNRA gene nrfA. Soil TN and SOC were identified as the key environmental factors regulating microbial community structure and the functional potential of C and N cycling pathways. Collectively, our findings provide a mechanistic understanding of how long-term application of humic acid urea enhances crop productivity by modulating the genetic potential of soil microorganisms in biogeochemical cycles, offering a biological foundation for optimizing fertilization strategies in sustainable agriculture. Full article

This study explored how top-dressed biogas slurry at winter wheat’s (Triticum aestivum L.) jointing stage (JS) and grain-filling period (GP) affects soil enzyme–microbe interactions, aiming to address nutrient supply–crop demand mismatches. A field experiment with five treatments (water [CK], chemical fertilizer [CF], and three biogas slurry topdressing regimes [S1–S3]) was conducted. Soil samples (0–20 cm) were collected at JS, flowering stage (FS), GP, and reaping period (RP) to analyze soil properties (total nitrogen [TN], available phosphorus [AP], available potassium [AK], soil organic matter [SOM], ammonium nitrogen [AN], pH), enzyme activities (urease [UE], neutral phosphatase [NP], sucrase [SC], catalase [CAT]), and microbial community abundance (via Illumina NovaSeq sequencing). Results showed biogas slurry altered enzyme activities, microbial structure (e.g., Actinomycetota, Ascomycota), and their interactions by regulating soil properties. JS application boosted Pseudomonadota and UE activity, GP application increased Ascomycota and CAT activity, and S3 had the most complex enzyme–microbe network, enhancing nutrient cycling. The analysis indicated that UE activity was strongly and positively correlated with several bacterial phyla (e.g., Planctomycetota, Verrucomicrobiota) (p < 0.01) and fungal phyla (e.g., Ascomycota) (p < 0.01). Full article

Grape pomace (GP), a by-product of winemaking, is rich in polyphenols and fiber, making it a promising and sustainable feed supplement for ruminants. This study evaluated the safety and productive impact of a 5% GP-supplemented diet (GP5) including non-lactating end-cycle (EC) ewes regularly destined for slaughter and human consumption, and lactating (LAC) ewes, over a 30-day period. Control (CTRL) animals received a standard pellet diet with no GP inclusion. Sampling was performed at four time points (T0, T10, T20, and T30), corresponding to days 0, 10, 20, and 30 of the experimental period. The study assessed clinical status, hematology/biochemistry (T0 and T30), milk composition (T0, T10, T20, and T30), meat quality traits and oxidative stability in EC ewes (T30). Since no significant differences were observed in the CTRL animals, the effects were evaluated within the GP5 group by comparing T0 vs. T30. Meat quality was assessed by comparing EC-GP5 to CTRL at T30. The GP extract showed a high total phenolic content (254.02 ± 20.39 mg GAE/g DW). No clinical or hematological alterations were observed, and most values remained within physiological ranges. Biochemical analysis revealed significant increases in albumin, bilirubin, creatinine, and triglycerides (p < 0.05), with significant decreases in plasma urea and glucose (p < 0.05). In LAC-GP5 ewes, milk urea and lactose concentrations decreased (p < 0.05), while pH increased (p < 0.05), with no significant changes in fat or casein content. These findings are consistent with reduced ruminal propionate availability, leading to decreased hepatic gluconeogenesis and lactose synthesis, with secondary effects on nitrogen metabolism and the acid–base profile of milk. In EC-GP5 ewes, meat quality traits were unaffected, and DPPH scavenging activity did not differ from CTRL (p > 0.05). GP5 was metabolically safe, induced adaptive changes in milk composition, and had no negative effects on meat quality, supporting the valorization of grape pomace as a sustainable feed resource. This trial was designed as a metabolic safety assessment, representing a preliminary step toward future mechanistic and molecular investigations. Full article

Soil microorganisms play a crucial role in maintaining soil functionality and ecological balance by participating in key processes such as organic matter decomposition, nutrient cycling, soil structure formation, and plant health support. High-throughput sequencing was utilized in this study to systematically investigate the influence of different crop types, maize (Zea mays), soybean (Glycine max), and Eleutherococcus senticosus, on the communities and assembly mechanisms of soil microorganisms in a cold-temperate agroecosystem. The results reveal that cultivation practices led to significant differences in soil chemical properties compared to fallow land (CK). Total carbon (TC), total nitrogen (TN), and available nitrogen (AN) were significantly lower in CK than in cultivated soils, with the highest values observed in maize treatments among all crop types (p < 0.05). Furthermore, the alpha diversity of bacteria in the maize and soybean treatments was significantly higher than that in CK, while there was no significant difference between the Eleutherococcus senticosus treatment and CK. However, no significant differences were observed in the ACE and Chao1 indices of the soil fungal communities across the four crop types. Beta diversity of bacterial and fungal communities exhibited significant variations under different crop cultivation practices. Specifically, compared with CK, the relative abundance of Sphingomonas, which contributes to the degradation of complex organic compounds, and Gemmatimonas, which plays a role in nitrogen cycling, significantly increased, whereas the relative abundance of Clavaria, a genus capable of decomposing recalcitrant lignin and cellulose, decreased. Analysis of community assemblies revealed that both bacterial and fungal communities were predominantly influenced by deterministic processes across all crop types. This finding provides a scientific basis for maintaining soil fertility in a targeted manner, precisely protecting crop health and optimizing agricultural management efficiently, thereby supporting sustainable agricultural practices. In conclusion, by examining microbial diversity and community dynamics across different crops, along with the underlying environmental factors, this study aims to enhance our understanding of plant–microbe interactions and provide insights for sustainable agricultural practices in cold-temperate regions. Full article

This study explores the effects of afforestation in infertile mountainous areas on soil microbial communities and functional nutrient cycling genes in young Cyclobalanopsis gilva forests, aiming to provide a scientific basis for promoting C. gilva growth. Employing metagenomic sequencing coupled with integrative analyses of microbial community structure and functional genes, this study took 7-year-old C. gilva forest stands in infertile mountainous areas of Shouchang Forest Farm, Zhejiang Province as the research object, using adjacent 7-year-old C. gilva forest in woodland areas as a control, to analyze the differences in soil microbial community structure and nutrient cycling functional genes in the rhizosphere (SCG) and non-rhizosphere (SNR) of infertile mountainous areas, as well as from the rhizosphere (FCG) and non-rhizosphere (FNR) of control woodland areas, and further explore their relationships with the growth of C. gilva. The results indicated that the contents of soil organic carbon (SOC), total nitrogen (TN), total phosphorus (TP), and microbial biomass nitrogen (MBN) in SNR were significantly lower than those in FNR by 59.50%, 39.57%, 29.32%, and 53.13%, respectively. Bradyrhizobium and Trebonia were the dominant genera in both site conditions; however, the relative abundance of these genera was lower in infertile mountainous areas compared to the control. Notably, the Shannon and Simpson indices of SCG were significantly lower by 0.49 and 0.01 than those of SNR (p < 0.05), respectively. Additionally, the relative abundances of carbon fixation and nitrogen fixation of SCG were significantly higher than those of SNR. And the relative abundances of functional genes involved in carbon cycling (glyA, fdhA), nitrogen cycling (nasA, narfC, narC, and nirB), and phosphorus cycling (phoB) in infertile mountainous areas were significantly higher than those in the control. The nutrient cycling processes and the expression of functional genes in SCG are coordinately regulated by soil nutrients (SOC and TN) and microbial biomass [MBC (microbial biomass carbon) and MBN]. This work provides a mechanistic foundation for optimizing afforestation strategies and ecological restoration in nutrient-limited mountainous ecosystems, highlighting the critical role of microbial functional plasticity in overcoming edaphic constraints. Full article

Schoenoplectus californicus (Totora) is a wetland plant of cultural and ecological importance, traditionally used for handicrafts and habitat conservation in Andean lakes. This study investigates its vegetative growth in two Andean lakes in Imbabura, Ecuador (Yahuarcocha and Imbacocha), which present contrasting chemical and biological conditions (total nitrogen, total phosphorus, and chlorophyll a). Vegetative growth analysis, using indices, provides tools for understanding Totora growth dynamics within a cultivation cycle. By quantifying biomass accumulation and other parameters, it is possible to infer how the plant responds to its environment and to guide its production and management. Our objective was to evaluate how physiological and morphological traits influence growth under differential nutrient conditions. A 210-day field trial was conducted with periodic sampling and analysis of physiological indices, combining classical and functional growth approaches. Key growth indices—relative growth rate (RGR), net assimilation rate (NAR), and leaf area ratio (LAR)—were calculated from photosynthetic surface area and dry biomass. Results show that plants in Yahuarcocha, a hypertrophic lake, exhibited greater biomass production (up to 2380 g m⁻²) and photosynthetic area (8.68 m²), reaching peak growth at 150 days. In contrast, plants in Imbacocha, a eutrophic lake, reached maximum growth at 180 days, with a greater dependence on NAR. Strong correlations among RGR, NAR, and LAR were observed in Yahuarcocha, highlighting the influence of higher nutrient concentrations and harvesting pressure on growth dynamics. These findings underscore the importance of considering lake trophic status when planning sustainable harvesting and cultivation strategies for Totora in Andean wetlands. Full article

To provide a scientific basis for rational nitrogen application under the rice–wheat rotation (R-W rotation) system, this study examined crop yield, NUE, and changes in soil nitrogen pools in response to different nitrogen application rates for rice (0–420 kg ha⁻¹) and wheat (0–360 kg ha⁻¹) from 2020 to 2022 in Jiangsu Province, China. Rice and wheat yields, along with their yield components, exhibited similar responses to nitrogen fertilization. In both cropping seasons, not only did current-season nitrogen application (CN) significantly affect yields but previous-season nitrogen application (PN) and the interaction between CN and PN also had notable effects. For both crops, the impact of CN on yield was greater than that of the CN × PN interaction, which in turn exceeded the effect of PN alone. These effects diminished with an increasing number of rice–wheat rotation cycles. The yields of rice and wheat initially increased and then declined with rising rates of both CN and PN. The maximum combined yield (14,459.9 kg ha⁻¹) was achieved with nitrogen application rates of 265.7 kg ha⁻¹ in the rice season and 257.1 kg ha⁻¹ in the wheat season. Yield responses to CN were primarily driven by panicle number, spikelets per panicle, and crop-specific traits, grain filling efficiency for rice, and grain weight for wheat. PN effects were mediated through its interaction with CN, with panicle number serving as the main pathway. However, when nitrogen application rates fell below 300 kg ha⁻¹ for rice and 240 kg ha⁻¹ for wheat, a reduction in soil nitrogen content was observed. Therefore, to achieve high yields while maintaining soil nitrogen pool stability, recommended nitrogen application rates are 300 kg ha⁻¹ for the rice season and 257.1 kg ha⁻¹ for the wheat season. Full article

Cover crop management in vineyards under a semiarid Mediterranean environment needs strategies that enhance soil C and N status and microbial functioning without increasing disturbance. This study compared cover crops biomass incorporation (harrowing, HR; rotary tillage; RT) and non-incorporation (NI, residues left on the topsoil) into the soil in a 12-year Grecanico dorato vineyard. Traditional vineyard soil management (continuously tilled for weeds control) was also used as a control. Soil samples from 0 to 20 and 20 to 40 cm were analyzed for total organic carbon (TOC), total nitrogen (TN), microbial biomass carbon (MBC) and nitrogen (MBN), and enzyme activities. NI and HR raised TOC and TN in the topsoil versus TR, with NI frequently maintaining advantages at depth. NI also maximized MBC/MBN and reduced the metabolic quotient (qCO₂), indicating improved microbial C-use efficiency; RT showed intermediate chemistry but depressed subsoil MBC and altered MBC/MBN. Enzyme profiles reflected contrasting mechanisms: RT boosted β-glucosidase in the topsoil, TR peaked for urease and arylsulfatase but alongside lower biomass and higher specific enzyme activities, while NI supported greater overall functioning via larger biomass and lower per-C enzyme demand. The calculated geometric mean enzyme (GMea) index emphasized transient TR flush versus steadier conservation functioning. Strong vertical stratification occurred for all indices, yet NI transmitted some benefits to 20–40 cm. We conclude that residue retention or moderate incorporation promotes larger, more efficient microbial population and more balanced nutrient cycling, whereas repeated rotary tillage risks subsoil inefficiencies. In semi-arid Mediterranean vineyards, low-disturbance cover-crop incorporation (HR) or, preferably, residue retention at the topsoil (NI) offer a simple, scalable route to sustain soil quality and long-term fertility. Full article