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20 pages, 5169 KB  
Article
Molecular Characterization of Tissue-Specific Anthocyanin Biosynthesis in Potato Stamens
by Sunjin Li, Zongming Guo, Xing Zhang and Huachun Guo
Plants 2025, 14(21), 3260; https://doi.org/10.3390/plants14213260 - 24 Oct 2025
Viewed by 370
Abstract
While stamen-focused research has predominantly examined flowering ornamental species, the tissue-specific regulatory mechanisms governing anthocyanin biosynthesis in potato stamens remain poorly understood. To characterize the tissue-specific regulatory mechanisms controlling anthocyanin biosynthesis in potato reproductive and storage organs, this investigation employed the red stamen [...] Read more.
While stamen-focused research has predominantly examined flowering ornamental species, the tissue-specific regulatory mechanisms governing anthocyanin biosynthesis in potato stamens remain poorly understood. To characterize the tissue-specific regulatory mechanisms controlling anthocyanin biosynthesis in potato reproductive and storage organs, this investigation employed the red stamen mutant line ‘BF1811-8’ and the commercial cultivar ‘Atlantic’ as experimental models. Anthocyanin composition and quantification were determined using high-performance liquid chromatography (HPLC), while RNA-sequencing coupled with quantitative real-time PCR validation enabled comprehensive analysis of differential gene expression patterns within the anthocyanin biosynthetic pathway. Biochemical analysis revealed complete absence of anthocyanins across all examined tissues in ‘Atlantic’, whereas ‘BF1811-8’ exhibited tissue-specific anthocyanin profiles: stamens accumulated delphinidin and pelargonidin, while tuber skin and flesh primarily contained pelargonidin and peonidin. Gene ontology and KEGG pathway enrichment analysis of differentially expressed genes identified significant representation within secondary metabolism, flavonoid biosynthesis, and pigmentation processes. The transcription factors StMYB4 and StMYBA1 demonstrated positive regulatory roles in anthocyanin biosynthesis within tuber flesh and skin, respectively, while exhibiting coordinated expression with structural genes including CHS, DFR, ANS, and GST. Notably, StbHLH94 showed stamen-specific regulatory activity and demonstrated transcriptional co-regulation with 3GT. These findings provide crucial insights into the tissue-specific regulatory architecture governing potato anthocyanin biosynthesis, establishing a foundation for elucidating molecular mechanisms underlying tissue-specific pigmentation and advancing functional cultivar development. Full article
(This article belongs to the Special Issue Genetics and Physiology of Tuber and Root Crops)
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17 pages, 11511 KB  
Article
Metabolome and Transcriptome Analysis Reveals Mechanisms Underlying Different Anthocyanin Biosynthesis Affecting Floral Color of Impatiens balsamina
by Jiayao Bian, Mengxue Xia, Aoxiang Ning, Xiuzhen Guo, Lin Peng, Yanjun Zhang, Jinping Deng, Bin Dong and Yiguang Wang
Horticulturae 2025, 11(11), 1275; https://doi.org/10.3390/horticulturae11111275 - 23 Oct 2025
Viewed by 487
Abstract
Impatiens balsamina is a widely distributed ornamental plant known for its attractive floral colors and significant pharmaceutical value. Anthocyanins are responsible for the floral coloration of I. balsamina. However, the regulatory mechanisms of anthocyanin biosynthesis in the various colors of I. balsamina [...] Read more.
Impatiens balsamina is a widely distributed ornamental plant known for its attractive floral colors and significant pharmaceutical value. Anthocyanins are responsible for the floral coloration of I. balsamina. However, the regulatory mechanisms of anthocyanin biosynthesis in the various colors of I. balsamina flowers remain unclear. In this study, we combined metabolome and transcriptome analysis of five groups of I. balsamina with white, pink, red, purple, and magenta flowers. The metabolome analysis identified anthocyanidins, including cyanidin, pelargonidin, delphinidin, peonidin, petunidin, and malvidin, in the petals of I. balsamina. Lower total anthocyanin levels were detected in white and pink flowers compared to red, purple, and magenta flowers. The red coloration was attributed to high concentrations of pelargonidin glucosides, while purple coloration was due to malvidin glucosides. Magenta flowers contained a high percentage of both malvidin and pelargonidin glucosides. Differentially expressed structural genes such as IbCHS1, IbF3H, IbF3′H, IbF3′5′H1, IbF3′5′H2, IbDFR1, IbOMT1, IbOMT2 and IbOMT3 were identified through transcriptome analysis. Furthermore, co-expression analysis identified candidate transcription factors correlated with these structural genes. This study provides new insights into the regulatory mechanisms of anthocyanin biosynthesis in I. balsamina, and offers a theoretical basis for the directed breeding of varieties with new floral colors. Full article
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16 pages, 7346 KB  
Article
Multi-Omics Insights into Altered Flavonoid Metabolism Underlying Skin Color Variation in a Bud Mutant of Vitis vinifera Zaoheibao
by Liping Huang, Xi Dai, Linan Zhang, Yue Zhu, Min Wang, Zhili Xun, Qifeng Zhao and Jiancheng Zhang
Metabolites 2025, 15(10), 675; https://doi.org/10.3390/metabo15100675 - 16 Oct 2025
Viewed by 482
Abstract
Background: Fruit skin color is a key determinant of grape quality and market value, primarily governed by anthocyanin biosynthesis. Methods: In this study, we explored the molecular basis of skin color variation in the grape cultivar Zaoheibao and its bud mutant, which displays [...] Read more.
Background: Fruit skin color is a key determinant of grape quality and market value, primarily governed by anthocyanin biosynthesis. Methods: In this study, we explored the molecular basis of skin color variation in the grape cultivar Zaoheibao and its bud mutant, which displays a striking shift from purple-black to yellow-green. Integrated metabolomic and transcriptomic analyses revealed extensive reprogramming of the flavonoid pathway in the mutant. Results: Metabolite profiling identified 233 differentially accumulated metabolites (DAMs), with a drastic reduction in anthocyanins, particularly cyanidin- and peonidin-derivatives, together with altered levels of flavonols and flavonoid glycosides. Transcriptome analysis detected 4036 differentially expressed genes (DEGs), with key anthocyanin biosynthetic genes (DFR, ANS, UFGT, GST) and MYB significantly downregulated. Multi-omics integration confirmed consistent enrichment of flavonoid-related pathways, while correlation network analysis highlighted strong associations between MYB regulators, structural genes, and anthocyanin-type metabolites. Conclusions: Collectively, these findings demonstrate that suppression of a MYB-centered regulatory module underlies the loss of pigmentation in the bud mutant, providing new insights into the molecular regulation of grape skin coloration and a theoretical basis for grape breeding and quality improvement. Full article
(This article belongs to the Special Issue Plant Metabolome and Metabolomics)
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17 pages, 8994 KB  
Article
Nutritional Composition, Bioactive Components and Antioxidant Activity of Garden Cress (Lepidium sativum L.) Grown Under Deficit Irrigation
by Ertan Yildirim, Melek Ekinci, Metin Turan, Hamza Goktas, Derya Nil Budak and Osman Sagdic
Horticulturae 2025, 11(10), 1239; https://doi.org/10.3390/horticulturae11101239 - 14 Oct 2025
Viewed by 746
Abstract
This study examined how different water restriction levels (T100%, T85%, T75%, and T55%) influence the nutritional and bioactive compounds of Bahar and Dadaş cress (Lepidium sativum L.) cultivars. The highest levels of phenolic compounds found in Dadaş and Bahar cress were quercetin [...] Read more.
This study examined how different water restriction levels (T100%, T85%, T75%, and T55%) influence the nutritional and bioactive compounds of Bahar and Dadaş cress (Lepidium sativum L.) cultivars. The highest levels of phenolic compounds found in Dadaş and Bahar cress were quercetin (8.33 ± 0.23–9.32 ± 0.25 µg/L), ferulic acid (8.08 ± 0.18–8.42 ± 0.19 µg/L), catechin (6.83 ± 0.28 µg/L), and caftaric acid (5.40 ± 0.45 µg/L). Mild and moderate drought treatments (85% and 75% humidity) caused notable increases in phenolic compounds. The highest antioxidant enzyme levels were observed as GST, 6GPD, and G6PD in Bahar and Dadaş cress, with enzyme levels rising under drought conditions. Notably, the mild drought treatment roughly doubled peonidin-3-glucoside acetyl levels in the cress cultivars. Sugar contents of Dadaş and Bahar cress cultivars also rose significantly with drought treatment. Riboflavin, the most abundant vitamin in cress cultivars, increased to 40.96 ± 1.24 mg/kg in Dadaş and 30.79 ± 1.60 mg/kg in Bahar cress under drought stress. Amino acids showed the highest increases under severe drought, with asparagine rising by roughly 2.76-fold and leucine increasing by 2.67-fold in Bahar cress. These findings suggest that controlled water restriction can enhance the nutritional and bioactive properties of cress, potentially leading to more nutrient-rich products for the food industry and human health. Full article
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15 pages, 284 KB  
Article
Maternal Dietary Anthocyanidin, Dietary Inflammatory Potential, and Risk of Small-for-Gestational-Age in China
by Binyan Zhang, Kun Xu, Baibing Mi, Hong Yan, Duolao Wang, Shaonong Dang and Ke Men
Nutrients 2025, 17(20), 3187; https://doi.org/10.3390/nu17203187 - 10 Oct 2025
Viewed by 795
Abstract
Background: The interaction between anthocyanidin intake and dietary inflammatory potential might influence small-for-gestational-age (SGA), but the available evidence has been limited. This study aims to examine the associations of anthocyanidin with SGA and whether these associations change with dietary inflammatory potential. Methods: Data [...] Read more.
Background: The interaction between anthocyanidin intake and dietary inflammatory potential might influence small-for-gestational-age (SGA), but the available evidence has been limited. This study aims to examine the associations of anthocyanidin with SGA and whether these associations change with dietary inflammatory potential. Methods: Data were derived from 2244 pregnant women enrolled in a community-based, randomized controlled trial between 2015 and 2019 in China. Anthocyanidin intake was calculated with the use of validated food-frequency questionnaires. The energy-adjusted dietary inflammatory index (EDII) was determined by aggregating data from 33 food parameters. Infant birth outcome measurements were obtained from hospital records. Associations were assessed by generalized estimating equations with adjustment for confounding factors. Results: During 39.7 gestational weeks of follow-up, 234 SGA cases occurred. The median intake of anthocyanidin was 28.7 mg/d. Higher consumption of total anthocyanidins (OR: 0.96, 95% CI: 0.95 to 0.97), cyanidin (OR: 0.96, 95% CI: 0.95 to 0.97), and peonidin (OR: 0.96, 95% CI: 0.96 to 0.97) subclasses was associated with a reduced risk of SGA. EDII was associated with an increased risk of SGA (OR: 1.08, 95% CI: 1.03 to 1.12). In addition, we observed that higher anthocyanidin intake was inversely associated with EDII (β: −0.40, 95% CI: −0.46 to −0.34). The inverse anthocyanidin-SGA association was mostly greater among women in the highest tertile of EDII (OR: 0.67, 95% CI: 0.65 to 0.68) compared with the lowest tertile. Conclusions: Higher anthocyanidin intake was inversely associated with SGA, especially among women with higher EDII scores. Full article
(This article belongs to the Special Issue Effects of Plant Extracts on Human Health—2nd Edition)
17 pages, 2910 KB  
Article
Bioavailability and Metabolic Fate of (Poly)phenols from Hull-Less Purple Whole-Grain Barley in Humans
by María-Engracia Cortijo-Alfonso, Silvia Yuste, Mariona Martínez-Subirà, Marian Moralejo, Carme Piñol-Felis, Alba Macià and Laura Rubió-Piqué
Nutrients 2025, 17(19), 3086; https://doi.org/10.3390/nu17193086 - 28 Sep 2025
Viewed by 448
Abstract
Background and Objectives: Anthocyanin-rich barley varieties have recently gained attention due to their high (poly)phenolic content and potential health benefits, yet human data on their bioavailability remain scarce. This study aimed to characterize the absorption, metabolism, and excretion of (poly)phenolic compounds from a [...] Read more.
Background and Objectives: Anthocyanin-rich barley varieties have recently gained attention due to their high (poly)phenolic content and potential health benefits, yet human data on their bioavailability remain scarce. This study aimed to characterize the absorption, metabolism, and excretion of (poly)phenolic compounds from a novel hull-less purple whole-grain barley (WGB) genotype. Methods: Eleven healthy volunteers consumed 140 g of purple WGB biscuits, and plasma and urine samples were collected over 6 h and 48 h, respectively. Results: UPLC-MS/MS analysis revealed a broad range of metabolites, with 11 (poly)phenolic compounds identified in plasma and 80 in urine. The biscuits were particularly rich in flavones (217 mg/140 g, mainly chrysoeriol derivatives), followed by hydroxycinnamic acids (~54 mg, mainly 4′-hydroxy-3′-methoxycinnamic acid), anthocyanins (44.8 mg), and flavan-3-ols (16.8 mg). In plasma, glycosylated anthocyanins and flavone conjugates (e.g., peonidin-3-O-glucuronide, chrysoeriol-O-glucuronide) were detectable within 1–2 h, consistent with early absorption. In contrast, microbial-derived catabolites—including valerolactones, phenylacetic and benzoic acids—were mainly excreted in urine between 8 and 24 h, reaching concentrations above 1000 nM. Conclusions: These findings provide novel insights into the bioavailability and metabolic fate of barley (poly)phenols, supporting their potential contribution to host and gut health. As a proof-of-concept study, it complements the limited data available from pigmented cereals and underscores the need for validation in larger cohorts. Full article
(This article belongs to the Section Nutrition and Metabolism)
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19 pages, 1729 KB  
Article
Effect of Drying Methods on Bioactivity of Pyrostegia venusta Extracts: Antioxidant Assays, Cytotoxicity, and Computational Approaches
by Milena Cremer de Souza, Letícia Bertini, Julia Estrella Szmaruk, Matheus Ribas de Almeida, Maria Luisa G. Agneis, Roberta Carvalho Cesário, Wesley Ladeira Caputo, Christiane Luciana da Costa, Vitor Augusto dos Santos Garcia and Fábio R. F. Seiva
Pharmaceuticals 2025, 18(9), 1315; https://doi.org/10.3390/ph18091315 - 2 Sep 2025
Viewed by 671
Abstract
Background/Objectives: Pyrostegia venusta (Cipó-de-São-João), a native Brazilian Cerrado plant, is rich antioxidant phytochemicals. The efficacy of herbal extracts, particularly their phenolic content and antioxidant potential, is influenced by the extraction method used. This study investigated the effects of two drying methods, hot-air oven [...] Read more.
Background/Objectives: Pyrostegia venusta (Cipó-de-São-João), a native Brazilian Cerrado plant, is rich antioxidant phytochemicals. The efficacy of herbal extracts, particularly their phenolic content and antioxidant potential, is influenced by the extraction method used. This study investigated the effects of two drying methods, hot-air oven drying and freeze-drying, on the antioxidant activity, cytotoxicity, and molecular interactions of aqueous extracts from the flowers and leaves of P. venusta. Methods: antioxidant capacity was assessed using DPPH, FRAP, and Folin–Ciocalteu assays; phenolic profiles were characterized by UHPLC; and cytotoxicity was evaluated via the MTT assay in HaCaT human keratinocyte cells. Additionally, in silico ADMET predictions were conducted to assess pharmacokinetics and potential toxicity, followed by molecular docking to evaluate interactions with the proliferation markers Ki-67 and PCNA. Results: freeze-dried extracts, particularly from the flowers, contained higher concentrations of phenolic compounds and exhibited superior antioxidant activity compared to hot-air oven-dried extracts. UHPLC analysis identified a range of bioactive phenolics including caffeic, chlorogenic, gallic, ferulic, and p-coumaric acids, quercetin, and anthocyanidins such as pelargonidin-3-O-glucoside and peonidin-3-O-glucoside, with distinct compositional differences between leaves and flowers. ADMET analysis revealed generally favorable pharmacokinetic properties for most compounds. Docking simulations indicated that multiple phenolics showed synergistic interactions with Ki-67 and PCNA. Conclusions: our findings highlight freeze-drying as the optimal method for preserving bioactive compounds in P. venusta and support the therapeutic potential of its flower extracts. The evidence supports the notion that the biological effects of P. venusta are driven by synergism among multiple constituents rather than isolated compounds. Full article
(This article belongs to the Section Natural Products)
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18 pages, 1332 KB  
Article
Optimization of Anthocyanin Extraction from Purple Sweet Potato Peel (Ipomea batata) Using Sonotrode Ultrasound-Assisted Extraction
by Raquel Lucas-González, Mirian Pateiro, Rubén Domínguez-Valencia, Celia Carrillo and José M. Lorenzo
Foods 2025, 14(15), 2686; https://doi.org/10.3390/foods14152686 - 30 Jul 2025
Viewed by 3320
Abstract
Sweet potato is a valuable root due to its nutritional benefits, health-promoting properties, and technological applications. The peel, often discarded during food processing, can be employed in the food industry, supporting a circular economy. Purple sweet potato peel (PSPP) is rich in anthocyanins, [...] Read more.
Sweet potato is a valuable root due to its nutritional benefits, health-promoting properties, and technological applications. The peel, often discarded during food processing, can be employed in the food industry, supporting a circular economy. Purple sweet potato peel (PSPP) is rich in anthocyanins, which can be used as natural colourants and antioxidants. Optimising their extraction can enhance yield and reduce costs. The current work aimed to optimize anthocyanin and antioxidant recovery from PSPP using a Box-Behnken design and sonotrode ultrasound-assisted extraction (sonotrode-UAE). Three independent variables were analysed: extraction time (2–6 min), ethanol concentration (35–85%), and liquid-to-solid ratio (10–30 mL/g). The dependent variables included total monomeric anthocyanin content (TMAC), individual anthocyanins, and antioxidant activity. TMAC in 15 extracts ranged from 0.16 to 2.66 mg/g PSPP. Peonidin-3-caffeoyl-p-hydroxybenzoyl sophoroside-5-glucoside was the predominant anthocyanin. Among four antioxidant assays, Ferric-reducing antioxidant power (FRAP) showed the highest value. Ethanol concentration significantly influenced anthocyanin and antioxidant recovery (p < 0.05). The model demonstrated adequacy based on the coefficient of determination and variation. Optimal extraction conditions were 6 min with 60% ethanol at a 30 mL/g ratio. Predicted values were validated experimentally (coefficient of variation <10%). In conclusion, PSPP is a promising matrix for obtaining anthocyanin-rich extracts with antioxidant activity, offering potential applications in the food industry. Full article
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18 pages, 4067 KB  
Article
Oxidative Degradation of Anthocyanins in Red Wine: Kinetic Characterization Under Accelerated Aging Conditions
by Khulood Fahad Saud Alabbosh, Violeta Jevtovic, Jelena Mitić, Zoran Pržić, Vesna Stankov Jovanović, Reem Ali Alyami, Maha Raghyan Alshammari, Badriah Alshammari and Milan Mitić
Processes 2025, 13(7), 2245; https://doi.org/10.3390/pr13072245 - 14 Jul 2025
Cited by 1 | Viewed by 1483
Abstract
The oxidative degradation of anthocyanins in red wine was investigated under controlled conditions using hydroxyl radicals generated in the presence of Cu (II) as a catalyst. A full factorial experimental design with 23 replicates was used to evaluate the effects of hydrogen peroxide [...] Read more.
The oxidative degradation of anthocyanins in red wine was investigated under controlled conditions using hydroxyl radicals generated in the presence of Cu (II) as a catalyst. A full factorial experimental design with 23 replicates was used to evaluate the effects of hydrogen peroxide concentration, catalyst dosage, and reaction temperature on anthocyanin degradation over a fixed time. Statistical analysis (ANOVA and multiple regression) showed that all three variables and the main interactions significantly affected anthocyanin loss, with temperature identified as the most influential factor. The combined effects were described by a first-order polynomial model. The activation energies for degradation ranged from 56.62 kJ/mol (cyanidin-3-O-glucoside) to 40.58 kJ/mol (peonidin-3-O-glucoside acetate). Increasing the temperature from 30 °C to 40 °C accelerated the degradation kinetics, almost doubled the rate constants and shortened the half-life of the pigments. At 40 °C, the half-lives ranged from 62.3 min to 154.0 min, depending on the anthocyanin structure. These results contribute to a deeper understanding of the stability of anthocyanins in red wine under oxidative stress and provide insights into the chemical behavior of derived pigments. The results are of practical importance for both oenology and viticulture and support efforts to improve the color stability of wine and extend the shelf life of grape-based products. Full article
(This article belongs to the Special Issue Processes in Agri-Food Technology)
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13 pages, 537 KB  
Article
Phenolic Profiles of Different Apricot Varieties Grown in Spain: Discrimination Among Cultivars During the Harvest Season
by Julia Morales, Helena Gómez-Martínez and Almudena Bermejo
Agronomy 2025, 15(7), 1652; https://doi.org/10.3390/agronomy15071652 - 7 Jul 2025
Cited by 1 | Viewed by 876
Abstract
Apricot is one of the most important Mediterranean fruits with high diversity and fruit quality properties, being an excellent raw material for polyphenol compounds. This study aimed to determine the anthocyanin, quercetin glycoside and phenolic acid contents in new apricot genotypes from the [...] Read more.
Apricot is one of the most important Mediterranean fruits with high diversity and fruit quality properties, being an excellent raw material for polyphenol compounds. This study aimed to determine the anthocyanin, quercetin glycoside and phenolic acid contents in new apricot genotypes from the breeding program at the Instituto Valenciano de Investigaciones Agrarias, confirming the potential of the ‘Goldrich’ cultivar to be a parental donor for increasing the antioxidant content, which would, in turn, enhance fruit quality. Phenolic composition of the apricot accessions is strongly genotype-dependent, with the concentrations of overall total phenolic compounds ranging from 770 to 260 mg 100 g−1 DW, reflecting significant genetic diversity. ‘Goldrich’ contributed to the polyphenol content; however, its influence varied across derived varieties, with ‘GG9310’ and ‘GG979’ enhancing the shikimic acid pathway and accumulating high levels of total phenolics. In contrast, ‘Mitger’ and ‘HG9850’ stood out for high anthocyanin synthesis, despite their lower levels of flavonols and phenolic acids. The predominant anthocyanin was cyanidin-3-O-rutinoside, followed by cyanidin-3-O-glucoside and peonidin-3-O-rutinoside in smaller amounts. Other phenolics were rutin and quercetin-3-O-glucuronide, as well as neochlorogenic and chlorogenic acids. The PCA model was applied to all data to identify the most attractive cultivars, and chromatographic analysis was performed in a short time using Ultra-High-Performance Liquid Chromatography (UHPLC) with diode array and mass spectrometric detection. Apricot peel is an excellent source of nutraceutical compounds with a chemical composition strongly determined by the cultivar. Results can help establish authenticity markers for apricot cultivars. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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26 pages, 2289 KB  
Article
Identification and Quantification of Anthocyanins in Various Organs of Potato Varieties (Solanum tuberosum L.) as Potential Visual Selection Markers During Breeding
by Irina V. Kim, Muhammad A. Nawaz, Dmitry I. Volkov, Aleksey G. Klykov, Mayya P. Razgonova and Kirill S. Golokhvast
Plants 2025, 14(13), 2042; https://doi.org/10.3390/plants14132042 - 3 Jul 2025
Viewed by 1061
Abstract
Phenolic compounds, which are a large group of plant pigments, are recognized as important antioxidants. The potato (Solanum tuberosum L.), particularly the pigmented varieties, could be a source of natural anthocyanins for producing dietary foods. In this study, we analyzed forty potato [...] Read more.
Phenolic compounds, which are a large group of plant pigments, are recognized as important antioxidants. The potato (Solanum tuberosum L.), particularly the pigmented varieties, could be a source of natural anthocyanins for producing dietary foods. In this study, we analyzed forty potato specimens from our germplasm collection and breeding nurseries using high-performance liquid chromatography (HPLC) and second-order mass spectrometry to identify anthocyanins. We found seven main anthocyanins in potato tubers: delphinidin-3-glucoside, delphinidin-3-rhamnosyl-5-glucoside, petunidin-3-glucoside, malvidin-3-glucoside, cyanidin-3-glucoside, cyanidin-3-rhamnosyl-5-glucoside, and pelargonidin-3-glucoside. Two anthocyanins were found in potato inflorescences: peonidin-3-coumaroyl glucoside and cyanidin-3-coumaroyl glucoside. On average, varieties from the group with red-purple inflorescences contained 187.6 mg/kg of anthocyanins. Genotypes with white corollas had an anthocyanin content below 0.5 mg/kg or between 1.3 and 3.6 mg/kg. Two potato varieties, Vasilek (605.2 mg/kg) and Fioletovyi (501.1 mg/kg), with blue-purple corollas, had the highest total anthocyanin content. Studying the anthocyanin profile of leaves allowed us to identify eleven anthocyanins. The highest anthocyanin content (331.3 mg/kg) was found in varieties with purple or blue-purple tubers, while the lowest content (an average of 15.1 mg/kg) was found in varieties with yellow or cream tubers. Genotypes with purple and blue-purple tuber skin had an average anthocyanin content of 190.7 mg/kg. The group with yellow and cream tubers had an insignificant anthocyanin content (1.2 mg/kg). Varieties from the group with pink tubers had an average anthocyanin content of 43.2 mg/kg. Thus, this study identified diagnostic traits that could be used to assess the morphological characteristics of potato genotypes. Full article
(This article belongs to the Special Issue Characterization and Conservation of Vegetable Genetic Resources)
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15 pages, 1505 KB  
Article
The Effects of UV-LED Technology on the Quality of Ready-to-Eat Pomegranates: Epigenetic Indicators and Metabolomic Analysis
by Aihemaitijiang Aihaiti, Yuanpeng Li, Xinmeng Huang, Yuting Yang, Ailikemu Mulati and Jiayi Wang
Foods 2025, 14(13), 2192; https://doi.org/10.3390/foods14132192 - 23 Jun 2025
Viewed by 701
Abstract
Pomegranates are rich in nutrients and classified among ready-to-eat fruits and vegetables. Although this ready-to-eat produce offers convenience, it presents risks associated with pathogenic microorganisms, highlighting the need for pre-sale disinfection. Ultraviolet light-emitting diodes (UV-LEDs) constitute an innovative non-thermal processing technology for food [...] Read more.
Pomegranates are rich in nutrients and classified among ready-to-eat fruits and vegetables. Although this ready-to-eat produce offers convenience, it presents risks associated with pathogenic microorganisms, highlighting the need for pre-sale disinfection. Ultraviolet light-emitting diodes (UV-LEDs) constitute an innovative non-thermal processing technology for food products, offering reduced heat generation and lower energy consumption compared to traditional ultraviolet (UV) irradiation methods. This study analyzed the effects of UV-LED technology on pomegranate seed quality over 0 to 5 days of storage. The results demonstrated significant increases in anthocyanins, polyphenols, ascorbic acid, and the antioxidant capacity in pomegranate following treatment, peaking on day 3. In contrast, the control group showed declining trends. After treatment, the aerobic mesophilic counts and counts of mold and yeast levels during storage measured between 2.73–3.23 log CFU/g and 2.56–3.29 log CFU/g, respectively, significantly lower than the control group. Non-targeted metabolomic analysis showed that UV-LED treatment prompted modifications in the biosynthetic pathways of flavonoids, flavonols, and anthocyanins. The expression of peonidin-3-O-rutinoside chloride increased by 46.46-fold within the anthocyanin biosynthesis pathway. In conclusion, UV-LED treatment represents a potential approach to the disinfection of ready-to-eat fruits and vegetables. Full article
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17 pages, 5446 KB  
Article
Transcriptome Profiling Identifies Key Regulators of Tuber Skin Color in Potato
by Boshu Li, Shuo Wang, Jun Hu, Liping Jin and Jianfei Xu
Plants 2025, 14(10), 1544; https://doi.org/10.3390/plants14101544 - 20 May 2025
Cited by 1 | Viewed by 828
Abstract
The color of tuber skin exhibits remarkable diversity in potato (Solanum tuberosum L.) and is intricately associated with variance in anthocyanin accumulation across different varieties. The regulatory mechanisms governing this phenomenon are poorly understood. In this study, we identified a natural, yellow-skinned [...] Read more.
The color of tuber skin exhibits remarkable diversity in potato (Solanum tuberosum L.) and is intricately associated with variance in anthocyanin accumulation across different varieties. The regulatory mechanisms governing this phenomenon are poorly understood. In this study, we identified a natural, yellow-skinned variant (Z28M) from the red-skinned tetraploid variety, Zhongshu 28 (Z28W), using simple sequence repeat (SSR) molecular marker amplification and trait observation. The transcriptional regulatory mechanisms underlying tuber skin color variation were investigated by analyzing anthocyanin profiles and transcriptomic data at the developmental and maturation stages. Ultra-performance liquid chromatography (UPLC-QTOF-MS) analysis indicated markedly reduced levels of pelargonidin and peonidin in Z28M compared with those in Z28W. Transcriptome profiling identified 1858 differentially expressed genes between Z28W and Z28M, with significant enrichment in the flavonoid and phenylpropanoid biosynthetic pathways. Weighted gene co-expression network analysis indicated a red-skinned associated module, MEred, encompassing key anthocyanin biosynthetic genes co-expressed with the transcription factor, StMYB3, which exhibited substantially higher expression in Z28W than in Z28M. K-means clustering indicated coordinated expression patterns among StCHS, StDFR, and StMYB3, suggesting transcriptional co-regulation. Collectively, these results highlight StMYB3 as a pivotal regulator of anthocyanin biosynthesis and a contributor to the tuber skin color divergence observed between Z28W and Z28M. Full article
(This article belongs to the Special Issue Genetics and Physiology of Tuber and Root Crops)
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15 pages, 3267 KB  
Article
In-Depth Exploration of the Coloration Mechanism of Iris dichotoma Pall. via Transcriptomic and Metabolomic Analyses
by Yalin Yu, Xiaojing Qiang, Fan Huang, Xiuzheng Huang and Lei Liu
Plants 2025, 14(9), 1387; https://doi.org/10.3390/plants14091387 - 4 May 2025
Viewed by 810
Abstract
Iris dichotoma Pall., renowned for its high ornamental value, is frequently cultivated in flowerbeds and courtyards, endowing garden landscapes with unique allure. Dark-hued flowers are widely regarded as more aesthetically appealing. This study utilized the petals of two distinct Iris dichotoma Pall. phenotypes [...] Read more.
Iris dichotoma Pall., renowned for its high ornamental value, is frequently cultivated in flowerbeds and courtyards, endowing garden landscapes with unique allure. Dark-hued flowers are widely regarded as more aesthetically appealing. This study utilized the petals of two distinct Iris dichotoma Pall. phenotypes as research materials to investigate the underlying mechanism of flower color formation. The purple-flowered Iris dichotoma Pall. was designated as Group P, and the white-flowered one as Group W. A comprehensive integrative analysis of the transcriptome and metabolome of the two petal types was carried out. Metabolomic analysis revealed that the contents of several anthocyanin derivatives, including delphinidin, petunidin, malvidin, peonidin, and procyanidin, were significantly higher in purple petals compared to white petals, with delphinidin exhibiting the highest content. The transcriptomic analysis detected 6731 differentially expressed genes (DEGs) between the white and purple petal types. Specifically, 3596 genes showed higher expression levels in purple petals, while 3135 genes exhibited lower expression levels in purple petals compared to white petals. Ten phenylalanine ammonia-lyase (PAL) genes, two chalcone synthase (CHS) genes, one anthocyanidin reductase (ANR) gene, one 4-coumarate-CoA ligase (4CL) gene, one dihydroflavonol 4-reductase (DFR) gene, one flavanone 3′-hydroxylase (F3′H) gene, and one flavonol synthase (FLS) gene were identified; they all had purple petals displaying higher expression levels than white petals. This research uncovers the potential formation mechanism of anthocyanins in the two Iris dichotoma Pall. types, thereby furnishing a theoretical foundation for floral breeding endeavors. Full article
(This article belongs to the Section Plant Genetics, Genomics and Biotechnology)
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Article
Gluten-Free Snacks with Micronized and Freeze-Dried Red Potatoes: Nutritional and Pro-Health Values
by Dorota Gumul and Marek Kruczek
Molecules 2025, 30(9), 1957; https://doi.org/10.3390/molecules30091957 - 28 Apr 2025
Viewed by 721
Abstract
The application of micronization to previously freeze-dried red potatoes significantly increased their polyphenol content and antioxidant potential. As a result, they became a valuable additive for enriching gluten-free snacks with bioactive compounds. The aim of this study was to assess the health-promoting potential [...] Read more.
The application of micronization to previously freeze-dried red potatoes significantly increased their polyphenol content and antioxidant potential. As a result, they became a valuable additive for enriching gluten-free snacks with bioactive compounds. The aim of this study was to assess the health-promoting potential as well as the content of polyphenols, phytosterols, and vitamin E in gluten-free extrudates, also referred to as gluten-free snacks, with the addition of 10% to 40% freeze-dried and micronized red potatoes. Additionally, the study examined color parameters and nutritional composition, including dietary fiber content. It was found that the extrudates obtained from micronized and freeze-dried red potatoes were characterized by high nutritional value but, most importantly, a strong health-promoting potential due to their exceptionally high content of phenolic acids and anthocyanins, which contributed to their remarkable antioxidant activity. Snacks enriched with freeze-dried and micronized red potatoes contain significantly higher levels of protein (3- to 14-fold increase), ash (4.5- to 22.5-fold increase), and soluble dietary fiber fraction (10- to 26-fold increase) compared to the control sample. Moreover, these snacks exhibited very high concentrations of chlorogenic, cryptochlorogenic, and neochlorogenic acids, as well as elevated levels of pelargonidin and peonidin glycosides—polyphenolic compounds that were not detected in the control sample. These snacks contained substantial amounts of tocopherols and phytosterols, such as stigmasterol and beta-sitosterol (3- to 10-fold increase compared to the control). The study conclusively demonstrated that the 40% addition of freeze-dried and micronized red potatoes to gluten-free extrudates ensures the development of an innovative product with excellent health benefits and strong antioxidant activity. Full article
(This article belongs to the Special Issue Food Bioactive Components in Functional Foods and Nutraceuticals)
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