Search Results (9,223)

Methyl jasmonate (MeJA) is a key regulator of plant defense and abiotic stress responses, while terpenoids are important secondary metabolites. However, the effects of MeJA on floral volatiles in Lagerstroemia indica and the underlying mechanisms remain unclear. In L. indica ‘Whit III’, MeJA treatment rapidly increased the emission of monoterpenes (e.g., citronellol) and sesquiterpenes (e.g., trans-farnesol) and advanced the peak emission time. We identified 34 LiTPS and 22 LiMYC genes in the genome, with promoter regions enriched in JA-responsive cis-elements. Expression analysis showed that LiMYC genes encoding putative JA repressors were transiently upregulated, whereas LiTPS genes located in a chromosome 11 cluster and LiTPS13 (7.33-fold induction) were strongly activated. These results suggest that MeJA may promote an early scent production through the coordinated activation of specific LiMYC and LiTPS gene sets, pointing to a potential mechanism by which jasmonate signaling modulates floral volatile emission. Full article

Elicitation is a powerful strategy for increasing bioactive metabolites in plant systems. This study is among the first to integrate growth responses, antioxidant enzyme activities, and metabolite profiling in G. paniculata adventitious roots (ARs). The study aims to evaluate the effects of yeast extract (YE) and salicylic acid (SA) on biomass traits, antioxidant enzymes (peroxidase, polyphenol oxidase, and phenylalanine ammonia-lyase), and phenolic metabolite profiles. ARs were exposed to YE (0.25–2 g L⁻¹) and SA (50–400 µM) for 28 days. Yeast extract significantly enhanced antioxidant capacity by promoting enzyme activities, phenolics, and flavonoids. In contrast, SA exhibited concentration-dependent effects. Moderate concentrations improved antioxidant activity, while higher concentrations promoted the accumulation of specific flavonoids. Maximum biomass production was achieved with 1 g L⁻¹ YE, which also resulted in the highest metabolite productivity. Conversely, SA treatments caused a progressive reduction in biomass with increasing concentration, although they enhanced the accumulation of selected bioactive compounds. Notably, 100 µM SA resulted in the highest phenolic content and antioxidant activity, whereas 400 µM SA markedly increased flavonoids such as rutin and quercetin. HPLC analysis identified seventeen phenolic compounds, demonstrating that YE acts as a broad-spectrum elicitor, whereas SA functions as a selective metabolic modulator. The differential enzymatic responses further highlight elicitor-specific regulatory patterns in antioxidant defense and secondary metabolism. Overall, these findings demonstrate that elicitor type and concentration differentially influence the balance between growth and secondary metabolism, providing a framework for optimizing metabolite production in controlled in-vitro systems. Full article

Extracellular DNA (eDNA) has gained attention as a danger signal between organisms because of the ecological implications of this mechanism and its great potential as a biological modulator in agriculture. Self-DNA and non-self DNA have been evaluated earlier, both as plant immune system elicitors. Here we show the effect of eDNA extracted from the bacterial phytopathogen Clavibacter michiganensis applied to tomato plants in different concentrations (50, 100 and 150 µg mL⁻¹). Monitoring morphology of the plants, spectrophotometric determinations and RT-qPCR assays showed a dose-dependent effect on plant growth and root development, activation of antioxidant enzymes such as catalase and superoxide dismutase, biosynthesis of secondary metabolites, including phenolic compounds and flavonoids, and differential expression of genes related to plant stress response, such as chalcone synthase and phenylalanine ammonia-lyase. Lower concentration treatments showed an increment in the variables as beneficial responses for agricultural practices, and the higher concentration (150 µg mL⁻¹) showed reduced or no effects on the evaluated variables. This work represents a step forward in the development of effective and more sustainable agricultural technology in crop production. Full article

Biological control fungi play an important role in the management of plant-parasitic nematodes; however, the molecular basis underlying their diverse biocontrol strategies remains incompletely understood. In this study, a comparative genomic analysis was performed on four representative biocontrol fungi: Purpureocillium lilacinum PLFJ-1, Trichoderma harzianum CBS 226.95, Pochonia chlamydosporia 170, and Aspergillus niger CBS 513.88. Genome comparison revealed substantial variation: genome size ranged from 34.0 Mb (A. niger) to 44.2 Mb (P. chlamydosporia), GC content from 47.5% (T. harzianum) to 58.5% (P. lilacinum), and predicted gene models also differed markedly among the four fungi. Phylogenetic analysis based on the Internal Transcribed Spacer divided these fungi into two major clades corresponding to distinct evolutionary lineages. Orthogroup analysis identified both a conserved core gene set and species-specific gene repertoires. Functional annotation using KEGG, KOG, and GO indicated a high degree of conservation across core metabolic processes, catalytic activities, and cellular components, with distinct differences within specific functional categories. Further comparative analyses demonstrated pronounced variation in the composition and abundance of carbohydrate-active enzymes (CAZymes) and peptidases, as well as a notable expansion and enrichment of S8 subtilisin-like serine peptidases in the nematode-parasitic fungi P. lilacinum and P. chlamydosporia. Secondary metabolite analysis revealed lineage-specific biosynthetic gene clusters (BGCs). Notably, P. lilacinum and P. chlamydosporia carried PKS/NRPS clusters potentially linked to nematicidal activity, while A. niger and T. harzianum displayed broader but less infection-specific metabolic profiles. Together, these findings suggest that distinct enzymatic and metabolic gene repertoires, particularly expansions of S8 serine peptidases and specific CAZyme families, may contribute to the biocontrol potential of these fungi. Full article

Precision nano-fertilization offers transformative potential for sustainable improvement of grape quality, yet the underlying molecular mechanisms remain poorly understood. Here, we investigated the effects of foliar-applied nano zero-valent iron (nZVI) and potassium dihydrogen phosphate (KH₂PO₄), in combination, on berry quality and secondary metabolic reprogramming in Vitis vinifera cv. Marselan. The combined nZVI/KH₂PO₄ treatment improved photosynthetic capacity, Fe/P co-accumulation, and berry quality traits including soluble solid content, sugar–acid ratio, and phenolic and aroma metabolite profiles. Crucially, integrated transcriptomic and metabolomic profiling identified 631 differentially expressed genes and 838 differentially accumulated metabolites, converging on flavonoid biosynthesis and glutathione metabolism as the dominant regulatory axes. Correlation network analysis pinpointed five hub regulatory genes—VvHCT, VvFLS1, VvLAR1/2, VvUGT88F5, and VvODC—as central orchestrators of nanomaterial-driven metabolic reprogramming: VvHCT and VvFLS1 coordinately redirected carbon flux toward hydroxycinnamic acid conjugates and flavonol accumulation, while VvLAR1/2 governed proanthocyanidin polymerization, and VvUGT88F5 modulated glycosylation-dependent metabolite stabilization. Notably, VvODC linked polyamine metabolism to glutathione-mediated stress buffering, revealing a previously uncharacterized crosstalk between nano-iron signaling and antioxidant reprogramming. These findings establish a mechanistic framework in which nZVI and KH₂PO₄ synergistically remodel the secondary metabolome through discrete yet interconnected transcriptional nodes, providing molecular targets for nano-enabled precision viticulture and broader applications of engineered nanomaterials in high-value crop improvement. Full article

The co-occurrence of mucilage and phenolic compounds within the same secretory cell is rarely documented in plants. Recently, such cells were reported in vegetative and floral organs of sensitive legumes (Mimosa), but without detailed subcellular analysis. To address this gap, we used transmission electron microscopy to examine the organelles involved in biosynthesis, the intracellular sites of metabolite storage, and the secretion processes across floral and foliar organs in five Mimosa species. Secretory epidermal cells of sepals, petals, and leaf blades produce both mucilage and phenolics, with no significant differences between organ types. Dictyosomes, rough endoplasmic reticulum, and plastids predominated in the cytoplasm of the secretory cell during biosynthesis. Dictyosomes may mediate mucilage production, the rough endoplasmic reticulum may be involved in phenolic synthesis, and plastids may contribute to the biosynthesis of both compounds. These metabolites are stored in distinct cellular domains: phenolics accumulate in a large vacuole near the outer periclinal wall, while mucilage is deposited between the microfibrils of the inner periclinal wall. This spatial separation is evident by the distention of the inner periclinal wall due to mucilage accumulation. The absence of karyokinesis and phragmoplast formation during metabolite segregation confirms that these secretory cells have two different functional domains, forming a uniseriate rather than biseriate epidermis. Notably, the inclusion of several species in the ultrastructural analyses enhances the significance of these findings. Full article

Clonostachys rosea is a promising biological control agent (BCA) against several plant pathogens, but its sensitivity to solar radiation limits its field efficacy. The biochemical changes occurring in C. rosea under light are still unknown, and no studies have assessed its antagonistic potential against Phytophthora cinnamomi and Phytophthora × cambivora, the main causal agents of ink disease in sweet chestnut. In this study, C. rosea was isolated from asymptomatic sweet chestnut plants in a forestry area affected by ink disease. We evaluated its in vitro antagonistic capacity against both oomycetes under dark and light conditions and investigated the metabolomic and volatilomic changes through HPLC-QToF-MS and GC-MS analyses. Under dark conditions, C. rosea exhibited remarkable inhibitory activity against both oomycetes in a dual-culture assay and through secreted secondary metabolites, including sorbicillinol and vertinolide, derivatives known for their biological activities. Light exposure significantly reduced antagonistic efficacy and secondary metabolite diversity. Volatilomic analyses revealed moderated differences between conditions, with volatile compounds whose biological roles remain uncharacterized and warrant further investigation. These findings indicate that light conditions critically affect the antagonistic potential of C. rosea, highlighting the importance of environmental factors in optimizing its use for the biological control of ink disease in chestnut. Full article

Cyanobacterial species in the Arabian Peninsula region display a diverse range of potential biotechnological application. This review summarizes the cyanobacteria diversity found in the Peninsula region, the bioactive compounds found in these species, and the several health benefits and applications. The Arabian Peninsula region comprises a wide range of cyanobacteria with representatives from the orders Oscillatoriales, Chroococcales, Stigonematales, and Nostocales. These microorganisms produce specialized metabolites such as photosynthetic pigments, pigment–protein complexes, lipopeptides, phenolic compounds, and unique secondary metabolites. Many of the metabolites offer beneficial biological functions including antioxidants, antibacterial, anti-cancer, anti-inflammatory antiviral, and neuroprotective ones. In addition to the medical-related practices, cyanobacteria in the Peninsula region might have several other applications. Other probable uses include their potential bioremediation capability to remove pollutants or heavy metals, as a potential biohydrogen source for renewable energy, and as biofertilizers and soil enhancement to support sustainable agriculture; other useful applications include bioplastics production (polyhydroxyalkanoates), soil microbiota improvement, and methane reduction. The review highlights the potential diverse biotechnological applications of Arabian Peninsula cyanobacteria toward bioremediation, bioplastics, ecosystem regeneration, biofertilizers, bioenergy, and agro-sustainability, as well as human health. This review highlights the importance of the further exploration and exploitation of these resourceful microorganisms for sustainable development in the Arabian Peninsula region. Full article

This study aimed to separate and characterize compounds from Aspergillus tubingensis ZMGR14. The antifungal activities of monomer compounds and the ethyl acetate (EtOAc) layer from the fermented liquor of A. tubingensis were isolated, purified and structurally identified. The EtOAc layer from the fermented liquor showed significant antifungal activity against Fusarium oxysporum and Alternaria alternata with IC₅₀ values of 273.8 and 330.7 μg·mL⁻¹, respectively. The EtOAc extract was further purified by column chromatography and recrystallization to yield six compounds. Antifungal trials showed that Cyclo-(L-Pro-D-Leu) (5) exhibited the highest inhibition against A. alternata and F. oxysporum, with an IC₅₀ value of 48.1 and 232.7 μM, respectively, and cyclo-(L-Pro-L-Leu) (6) displayed moderate antifungal activity against Alternaria solani, with an IC₅₀ value of 493.4 μM. The results suggest that the EtOAc extract of ZMGR14 and its bioactive compounds hold promise as environmentally friendly microbial fungicides. Full article

This study investigated the comprehensive effects of harvest timing and stir-frying on Ziziphi Spinosae Semen (ZSS) quality using chemical profiling, Caenorhabditis elegans bioassays, and intelligent sensory analysis (electronic nose (E-nose), electronic tongue (E-tongue), and gas chromatography-ion mobility spectrometry (GC-IMS)). Results indicated that delaying harvest to 15 September significantly promoted bioactive accumulation, with total saponins reaching 9.54 g kg⁻¹ at this stage. Stir-frying the optimal raw material further enhanced pharmacological efficacy; spinosin content increased 1.48-fold, and C. elegans motility cessation time significantly shortened from 240 s to 180 s, demonstrating superior sedative activity. Additionally, stir-frying improved the total sensory score from 53.8 to 80.4, characterized by a harmonized balance of bitterness and umami. GC-IMS analysis identified Maillard reaction products, specifically 2-methylpyrazine and 2-methylbutanal as key markers responsible for the distinctive roasted aroma. Consequently, harvesting the fruits of Ziziphus jujuba var. spinosa at physiological maturity, followed by the stir-frying of ZSS effectively enhances its sedative effects and flavor profile. Full article

Mycotoxins are one of the biggest threats to global food safety, public health, and economic stability. More than 400 mycotoxins have been found to be secondary metabolites of toxigenic fungi, mostly from the genera Aspergillus, Fusarium, Penicillium, and Alternaria. Aflatoxins (AFs), ochratoxin A (OTA), deoxynivalenol (DON), zearalenone (ZEA), fumonisins (FBs), patulin (PAT), and T-2/HT-2 toxins are the most dangerous to the health of people and animals. Conventional physical and chemical decontamination methods are only partially effective and can reduce food quality, leave toxic residues, or be too expensive for smallholder food systems. Recent studies have shown that the application of lactic acid bacteria (LAB) as a biological detoxification method is a safe, cost-effective, and environmentally friendly option, and has a long history of safe use in fermented foods. Selected strains or taxonomic units have been granted GRAS status by the FDA or QPS (Qualified Presumption of Safety) status by EFSA. However, their use for mycotoxin detoxification still requires strain-level safety assessment and efficacy validation in the intended food matrix. There are several mechanisms by which LAB employ to reduce the bioavailability of mycotoxins in food systems: (i) physical adsorption via cell wall components such as peptidoglycan, teichoic acids, and exopolysaccharides; (ii) enzymatic biotransformation that may produce non-toxic or less-toxic metabolites, though the safety of degradation products requires case-by-case toxicological assessment; (iii) antifungal metabolite production that inhibits fungal growth and mycotoxin biosynthesis; and (iv) competitive exclusion of toxigenic fungi during fermentation. This comprehensive review examines the existing evidence on the detoxification of major food mycotoxins by LAB, with an emphasis on mechanisms, strain-specific efficacy, food-matrix applications, and factors that affect detoxification efficacy. Discussion has also been made of translating in vitro findings to in vivo settings and food-scale applications, alongside regulatory frameworks, current challenges, and future research directions. The review also suggests ways to combine LAB with new technologies, such as encapsulation, genetic engineering, and fermentation optimization, to make food systems safer by synergistically controlling mycotoxins. Full article

Medicinal mushrooms have become an important component of modern dietary supplementation and functional nutrition due to their diverse biological activities and long-standing use in traditional medicine. Among the most widely studied and utilized species are Ganoderma lucidum, Lentinula edodes, Grifola frondosa, Cordyceps militaris, Cordyceps sinensis, Trametes versicolor, and Inonotus obliquus. Their therapeutic potential is associated with a wide range of biologically active constituents, including polysaccharides, triterpenoids, phenolic compounds, and other secondary metabolites. Experimental and clinical studies indicate that extracts derived from these species may support immune function, modulate inflammatory responses, and exhibit antioxidant, antimicrobial, and anticancer properties. In addition to extensive in vitro and in vivo investigations, a growing number of clinical studies have evaluated the safety and potential therapeutic benefits of medicinal mushroom preparations in humans. In recent years, increasing attention has been directed toward their incorporation into nutraceutical formulations and functional foods aimed at supporting health and preventing chronic diseases. Advances in cultivation technologies and extraction methods have also contributed to improved availability and standardization of mushroom-derived products. This review provides a comprehensive overview of selected medicinal mushroom species commonly used in dietary supplements, focusing on their bioactive constituents, reported biological activities, and potential applications in contemporary medicine. Full article

Myrtus communis L. (common myrtle) is an economically valuable Mediterranean shrub with diverse applications in food, pharmaceutical, and ornamental sectors. However, the biochemical diversity of myrtle genotypes from Mediterranean environments remains insufficiently characterized, particularly regarding the relationship between primary and secondary metabolism and stress adaptation. This study investigated the biochemical and aroma profiles of six myrtle genotypes selected from natural populations in Antalya, Turkey, to identify chemotypic diversity and elucidate metabolic diversity observed in Mediterranean genotypes. Volatile compounds were analyzed using HS-SPME/GC-MS, while sugars and organic acids were quantified by HPLC. Multivariate statistical analyses (PCA, hierarchical clustering) were employed to evaluate metabolic relationships and genotype classification. Descriptive analysis suggested three potential chemotypic patterns: (i) 1,8-cineole-type (G34, G36) with G29 showing a transitional profile, (ii) α-Pinene-type (G15, G37), and (iii) Ester-aldehyde type (G9). These groupings are based on single volatile measurements and should be considered preliminary patterns pending validation through replicate analyses. Significant genotypic variation was observed for primary metabolites (sugars and organic acids) (p < 0.001, η² > 0.90), as evaluated by ANOVA with triplicate biological replicates. Volatile compound differences were evaluated as descriptive exploratory patterns only. Hierarchical clustering revealed three metabolic strategies: balanced metabolism integrating diverse volatile and primary metabolite profiles (Cluster 1: G9, G15, G37), terpene-rich volatile defense with enhanced organic acid metabolism (Cluster 2: G29, G36), and specialized 1,8-cineole-dominant biosynthesis (Cluster 3: G34). These findings highlight substantial metabolic diversity and provide a basis for germplasm evaluation and selection and potential applications. Full article

Aspergillus fungi are a source of low-molecular compounds of various structures possessing biological activities. We investigated the secondary metabolite profile of the soil fungus A. calidoustus VKM F-4916. The strain was found to synthesize new metabolites attributed to furoisocoumarins, which we named asperisocoumarin J and K, and a known siderophore desferritriacetylfusigen. The structure of asperisocoumarin J and K were determined by mass spectrometry and NMR spectroscopy. Asperisocoumarins J, K and desferritriacetylfusigen possessed a phytotoxicity, inhibiting the lettuce root growth. Sow thistle leaf and wheat leaf cuttings were sensitive to the action of asperisocoumarin J and K at a concentration of 5 mg/mL. Analysis of the structures of furoisocoumarins (asperisocoumarins J and K) using the online resource Pesti-DGI-Net showed that compounds had the physico-chemical properties favorable for pesticide development, in particular, fungicides and herbicides. An in-depth study of the phytotoxic properties of furoisocoumarins and their natural analogs is of interest in the context of the search for new herbicide compounds. Full article

Propolis is a resinous bee product with a long history of medicinal use, valued for its antimicrobial, antioxidant and anti-inflammatory properties. Identification of its key bioactive constituents would enable chemical standardization and quality control of propolis-based products, once their activity is confirmed. In the current study we investigated a Greek propolis sample (PR09) belonging to a phenolic-rich type, dominated by flavonoids. After extraction and fractionation with Fast Centrifugal Chromatography (FCPC), the fractions were evaluated for their DPPH and collagenase inhibitory activity while their NMR metabolic profiles were recorded. NMR HeteroCovariance Approach (NMR-HetCA) analysis of PR09 propolis methanolic extract revealed the presence of 26 secondary metabolites: seven diterpenes, 13 flavonoids and six caffeic acid esters. All compounds were identified from NMR-HetCA and Statistical Total Correlation Spectroscopy (STOCSY) plots prior to their isolation. NMR-HetCA analysis indicated that caffeic acid derivatives were the most potent inhibitors of the DPPH free radical and collagenase. Additionally, galangin (11) and 3-O-methyl galangin (24) appeared to contribute considerably to the antioxidant activity, while together with pinocembrin (12), they all contributed to the extract’s collagenase inhibitory activity. In contrast, metabolites such as isocupressic acid (8), 13-epi-cupressic acid (18), pinostrobin (17) and chrysin (7) appeared not to contribute to the observed activities. Bioassays of selected metabolites confirmed the NMR-HetCA’s predictions, with caffeic acid phenethyl ether (1) exhibiting very high inhibition (92.54 ± 0.16%), and notable collagenase inhibition close to 50% (at 100 μg/mL). Overall, the findings demonstrate that NMR-HetCA enables rapid identification of bioactive compounds in propolis extracts and is proposed as a tool in accelerating the evaluation of propolis samples prior to laborious isolation procedures. Full article