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Keywords = solvation enthalpy and entropy

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22 pages, 9852 KB  
Article
A Combined Thermodynamic and Computational Study of Alkaline Earth Metal Cations Complexation by a Fluorescent Calix[4]arene Receptor
by Andrea Usenik, Matija Modrušan, Katarina Leko, Jakov Borovec, Sven Marinac, Lucija Hok, Nikola Cindro, Robert Vianello, Gordan Horvat, Josip Požar, Tomica Hrenar and Vladislav Tomišić
Int. J. Mol. Sci. 2025, 26(3), 1264; https://doi.org/10.3390/ijms26031264 - 31 Jan 2025
Viewed by 1287
Abstract
Complexation of alkaline earth metal cations with fluorescent tertiary-amide lower-rim calix[4]arene derivative bearing two phenanthridine moieties was studied experimentally (UV spectrophotometry, fluorimetry, isothermal microcalorimetry, NMR spectroscopy) and computationally (classical molecular dynamics and DFT calculations) at 25 °C. The complexation reactions were studied in [...] Read more.
Complexation of alkaline earth metal cations with fluorescent tertiary-amide lower-rim calix[4]arene derivative bearing two phenanthridine moieties was studied experimentally (UV spectrophotometry, fluorimetry, isothermal microcalorimetry, NMR spectroscopy) and computationally (classical molecular dynamics and DFT calculations) at 25 °C. The complexation reactions were studied in acetonitrile, methanol, and ethanol, whereby the solvent effect on cation-binding processes was particularly addressed. The complex stability constants and standard reaction thermodynamic quantities (Gibbs energies, enthalpies, and entropies) were determined. The receptor exhibited particularly high affinity towards alkaline earth metal cations in acetonitrile, with peak affinity for Ca2+. The stability of all complexes was significantly lower in ethanol and methanol, where the most stable complex was formed with Sr2+. The decrease in cation-binding abilities was a consequence of the differences in solvation of the reactants and products of the complexation reactions (involving inclusion of the solvent molecule in the calixarene cone), cation charge density, as well as the cation–ligand binding site compatibility. The reactions were enthalpically controlled in acetonitrile, whereas in methanol and ethanol, the binding processes were endothermic and thus entropy driven. The results of 1H NMR measurements, MD simulations, and DFT calculations provided an insight into the structure of the complexes and the corresponding adducts with solvent molecules, as well as the structural aspects behind the differences in complexation thermodynamics. Due to the significant increase in its fluorescence upon cation binding, the studied calixarene derivative was proven to be a promising luminescent sensor for alkaline earth metal cations. Full article
(This article belongs to the Collection Feature Papers in 'Physical Chemistry and Chemical Physics')
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26 pages, 1298 KB  
Article
Quantum Chemical (QC) Calculations and Linear Solvation Energy Relationships (LSER): Hydrogen-Bonding Calculations with New QC-LSER Molecular Descriptors
by Costas Panayiotou
Liquids 2024, 4(4), 663-688; https://doi.org/10.3390/liquids4040037 - 4 Oct 2024
Cited by 3 | Viewed by 1608
Abstract
A new method, based on quantum chemical calculations, is proposed for the thermodynamically consistent reformulation of QSPR-type Linear Free-Energy Relationship (LFER) models. This reformulation permits the extraction of valuable information on intermolecular interactions and its transfer in other LFER-type models, in acidity/basicity scales, [...] Read more.
A new method, based on quantum chemical calculations, is proposed for the thermodynamically consistent reformulation of QSPR-type Linear Free-Energy Relationship (LFER) models. This reformulation permits the extraction of valuable information on intermolecular interactions and its transfer in other LFER-type models, in acidity/basicity scales, or even in equation-of-state models. New molecular descriptors of electrostatic interactions are derived from the distribution of molecular surface charges obtained from COSMO-type quantum chemical calculations. The widely used and very successful Abraham’s Linear Solvation Energy Relationship (LSER) model is selected as the reference LSER model for the calculations in solute–solvent systems as well as in solute self-solvation. Hydrogen-bonding free energies, enthalpies, and entropies are now derived for a variety of common solutes. The capacity of the method to address the role of conformational changes in solvation quantities is discussed. The perspectives of the LSER model with the implementation of the new descriptors are also discussed. Full article
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19 pages, 6825 KB  
Article
Selectivities of Carbon Dioxide over Ethane in Three Methylimidazolium-Based Ionic Liquids: Experimental Data and Modeling
by Nadir Henni, Amr Henni and Hussameldin Ibrahim
Molecules 2024, 29(17), 4152; https://doi.org/10.3390/molecules29174152 - 1 Sep 2024
Cited by 1 | Viewed by 1605
Abstract
This work focused on the solubility of ethane in three promising ionic liquids {1-Hexyl-3-methylimidazolium bis(trifluormethylsulfonyl) imide [HMIM][Tf2N], 1-Butyl-3-methyl-imidazolium dimethyl-phosphate [BMIM][DMP], and 1-Propyl-3-methylimidazolium bis(trifluoromethyl-sulfonyl)-imide [PMIM][Tf2N]}. The solubilities were measured at 303.15 K to 343.15 K and pressures up to 1.4 MPa using a gravimetric [...] Read more.
This work focused on the solubility of ethane in three promising ionic liquids {1-Hexyl-3-methylimidazolium bis(trifluormethylsulfonyl) imide [HMIM][Tf2N], 1-Butyl-3-methyl-imidazolium dimethyl-phosphate [BMIM][DMP], and 1-Propyl-3-methylimidazolium bis(trifluoromethyl-sulfonyl)-imide [PMIM][Tf2N]}. The solubilities were measured at 303.15 K to 343.15 K and pressures up to 1.4 MPa using a gravimetric microbalance. The overall ranking of ethane solubility in the ionic liquids from highest to lowest is the following: [HMIM][Tf2N] > [PMIM][Tf2N] > [BMIM][DMP]. The Peng–Robinson equation of state was used to model the experimental data using three different mixing rules: van der Waals one, van der Waals two, and Wong–Sandler mixing rules combined with the Non-Random Two-Liquid model. The average absolute deviations for the three mixing rules for the ionic liquids at the three temperatures were 4.39, 2.45, and 2.45%, respectively. Henry’s Law constants for ethane in [BMIM] [DMP] were the highest (lowest solubility) amongst other ionic liquids studied in this work. The solubility ranking for the 3 ILs was confirmed by calculating their overall polarity parameter (N) using COSMO-RS. The selectivity of CO2 over C2H6 was estimated at three temperatures, and the overall ranking of the selectivity was in the following order: [PMIM][Tf2N] > [BMIM][DMP] > [HMIM][Tf2N] > Selexol. Selexol is an efficient and widely used physical solvent in gas sweetening. It has lower selectivity than the three ionic liquids studied. [PMIM][Tf2N], a promising solvent, has the highest selectivity among the three ILs studied and would, therefore, be the best choice if, in addition to carbon dioxide capture, ethane co-absorption was to be avoided. The enthalpy and entropy of solvation at infinite dilution were also estimated. Full article
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9 pages, 255 KB  
Article
A van der Waals Model of Solvation Thermodynamics
by Attila Tortorella and Giuseppe Graziano
Entropy 2024, 26(8), 714; https://doi.org/10.3390/e26080714 - 22 Aug 2024
Viewed by 1659
Abstract
Exploiting the van der Waals model of liquids, it is possible to derive analytical formulas for the thermodynamic functions governing solvation, the transfer of a solute molecule from a fixed position in the ideal gas phase to a fixed position in the liquid [...] Read more.
Exploiting the van der Waals model of liquids, it is possible to derive analytical formulas for the thermodynamic functions governing solvation, the transfer of a solute molecule from a fixed position in the ideal gas phase to a fixed position in the liquid phase. The solvation Gibbs free energy change consists of two contributions: (a) the high number density of all liquids and the repulsive interactions due to the basic fact that each molecule has its own body leading to the need to spend free energy to produce an appropriate cavity to contain the solute molecule; (b) the ubiquitous intermolecular attractive interactions lead to a gain in free energy for switching-on attractions between the solute molecule and neighboring liquid molecules. Also the solvation entropy change consists of two contributions: (a) there is an entropy loss in all liquids because the cavity presence limits the space accessible to liquid molecules during their continuous translations; (b) there is an entropy gain in all liquids, at room temperature, due to the liquid structural reorganization as a response to the perturbation represented by solute addition. The latter entropy contribution is balanced by a corresponding enthalpy term. The scenario that emerged from the van der Waals model is in qualitative agreement with experimental results. Full article
(This article belongs to the Special Issue Solvation Thermodynamics and Its Applications)
17 pages, 1724 KB  
Article
Solubility and Thermodynamics Data of Cabozantinib Malate in Various Aqueous Solutions of Dimethyl Sulfoxide at Different Temperatures
by Faiyaz Shakeel, Nazrul Haq, Sultan Alshehri and Ibrahim A. Alsarra
Molecules 2023, 28(23), 7805; https://doi.org/10.3390/molecules28237805 - 27 Nov 2023
Cited by 2 | Viewed by 3057
Abstract
Cabozantinib malate (CBZM), a new anticancer medication, has been studied for its solubility and thermodynamic properties in a variety of {dimethyl sulfoxide (DMSO) + water (H2O)} mixtures at 298.2–318.2 K and 101.1 kPa. Using the shake flask technique, the solubility of [...] Read more.
Cabozantinib malate (CBZM), a new anticancer medication, has been studied for its solubility and thermodynamic properties in a variety of {dimethyl sulfoxide (DMSO) + water (H2O)} mixtures at 298.2–318.2 K and 101.1 kPa. Using the shake flask technique, the solubility of CBZM was assessed and the results were correlated to the van’t Hoff, Apelblat, Buchowski–Ksiazczak λh, Yalkowsky–Roseman, Jouyban–Acree, and Jouyban–Acree-van’t Hoff models. There was a significant correlation between the experimental CBZM solubility data and all computational models, as evidenced by the error values for all computational models being less than 5.0%. Temperature and DMSO mass percentage improved the CBZM mole fraction solubility in the cosolvent solutions of {DMSO + H2O}. At 318.2 K, pure DMSO had the highest mole fraction solubility of CBZM (4.38 × 10−2), whereas pure H2O had the lowest mole fraction solubility (2.24 × 10−7 at 298.2 K). The positive values of computed thermodynamic parameters indicated that the dissolution of CBZM was endothermic and entropy-driven in all of the {DMSO + H2O} solutions investigated. It was found that the CBZM solvation in {DMSO + H2O} solutions is governed by enthalpy. When compared to CBZM-H2O, CBZM-DMSO showed the highest molecular interactions. The findings of this investigation demonstrated that DMSO has a great deal of potential for CBZM solubilization in H2O. Full article
(This article belongs to the Section Physical Chemistry)
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16 pages, 1786 KB  
Article
Solubility and Thermodynamic Analysis of Isotretinoin in Different (DMSO + Water) Mixtures
by Faiyaz Shakeel, Nazrul Haq, Sultan Alshehri, Miteb Alenazi, Abdulrahman Alwhaibi and Ibrahim A. Alsarra
Molecules 2023, 28(20), 7110; https://doi.org/10.3390/molecules28207110 - 16 Oct 2023
Cited by 2 | Viewed by 2487
Abstract
The solubility and solution thermodynamics of isotretinoin (ITN) (3) in numerous {dimethyl sulfoxide (DMSO) (1) + water (H2O) (2)} combinations were studied at 298.2–318.2 K under fixed atmospheric pressure of 101.1 kPa. A shake flask methodology was used to determine ITN [...] Read more.
The solubility and solution thermodynamics of isotretinoin (ITN) (3) in numerous {dimethyl sulfoxide (DMSO) (1) + water (H2O) (2)} combinations were studied at 298.2–318.2 K under fixed atmospheric pressure of 101.1 kPa. A shake flask methodology was used to determine ITN solubility, and correlations were made using the “van’t Hoff, Apelblat, Buchowski-Ksiazczak λh, Yalkowsky-Roseman, Jouyban-Acree, and Jouyban-Acree-van’t Hoff models”. In mixtures of {(DMSO (1) + H2O (2)}, the solubility of ITN in mole fractions was enhanced with the temperature and DMSO mass fraction. The mole fraction solubility of ITN was highest in neat DMSO (1.02 × 10−1 at 318.2 K) and lowest in pure H2O (3.14 × 10−7 at 298.2 K). The output of computational models revealed good relationships between the solubility data from the experiments. The dissolution of ITN was “endothermic and entropy-driven” in all of the {(DMSO (1) + H2O (2)} mixtures examined, according to the positive values of measured thermodynamic parameters. Enthalpy was discovered to be the driving force behind ITN solvation in {(DMSO (1) + H2O (2)} combinations. ITN-DMSO displayed the highest molecular interactions when compared to ITN-H2O. The outcomes of this study suggest that DMSO has a great potential for solubilizing ITN in H2O. Full article
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13 pages, 2230 KB  
Article
The Nature of the Enthalpy–Entropy Compensation and “Exotic” Arrhenius Parameters in the Denaturation Kinetics of Proteins
by Alexey V. Baklanov and Vitaly G. Kiselev
Int. J. Mol. Sci. 2023, 24(13), 10630; https://doi.org/10.3390/ijms241310630 - 25 Jun 2023
Cited by 5 | Viewed by 2102
Abstract
Protein unfolding is a ubiquitous process responsible for the loss of protein functionality (denaturation), which, in turn, can be accompanied by the death of cells and organisms. The nature of enthalpy–entropy compensation (EEC) in the kinetics of protein unfolding is a subject of [...] Read more.
Protein unfolding is a ubiquitous process responsible for the loss of protein functionality (denaturation), which, in turn, can be accompanied by the death of cells and organisms. The nature of enthalpy–entropy compensation (EEC) in the kinetics of protein unfolding is a subject of debate. In order to investigate the nature of EEC, the “completely loose” transition state (TS) model has been applied to calculate the Arrhenius parameters for the unfolding of polyglycine dimers as a model process. The calculated Arrhenius parameters increase with increasing dimer length and demonstrate enthalpy–entropy compensation. It is shown that EEC results from the linear correlations of enthalpy and entropy of activation with dimer length, which are derived directly from the properties of the transition state. It is shown that EEC in solvated (hydrated, etc.) proteins is a direct consequence of EEC in proteins themselves. The suggested model allows us also to reproduce and explain “exotic” very high values of the pre-exponential factor measured for the proteins unfolding, which are drastically higher than those known for unimolecular reactions of organic molecules. A similar approach can be applied to analyzing the nature of EEC phenomena observed in other areas of chemistry. Full article
(This article belongs to the Section Physical Chemistry and Chemical Physics)
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16 pages, 1529 KB  
Article
Solubility and Thermodynamic Properties of Febuxostat in Various (PEG 400 + Water) Mixtures
by Adel F. Alghaith, Wael A. Mahdi, Nazrul Haq, Sultan Alshehri and Faiyaz Shakeel
Materials 2022, 15(20), 7318; https://doi.org/10.3390/ma15207318 - 19 Oct 2022
Cited by 2 | Viewed by 2048
Abstract
The solubility of the poorly soluble medicine febuxostat (FXT) (3) in various {polyethylene glycol 400 (PEG 400) (1) + water (H2O) (2)} mixtures has been examined at 298.2–318.2 K and 101.1 kPa. FXT solubility was measured using an isothermal method and [...] Read more.
The solubility of the poorly soluble medicine febuxostat (FXT) (3) in various {polyethylene glycol 400 (PEG 400) (1) + water (H2O) (2)} mixtures has been examined at 298.2–318.2 K and 101.1 kPa. FXT solubility was measured using an isothermal method and correlated with “van’t Hoff, Apelblat, Buchowski–Ksiazczak λh, Yalkowsky–Roseman, Jouyban–Acree, and Jouyban–Acree-van’t Hoff models”. FXT mole fraction solubility was enhanced via an increase in temperature and PEG 400 mass fraction in {(PEG 400 (1) + H2O (2)} mixtures. Neat PEG 400 showed the highest mole fraction solubility of FXT (3.11 × 10–2 at 318.2 K), while neat H2O had the lowest (1.91 × 10–7 at 298.2 K). The overall error value was less than 6.0% for each computational model, indicating good correlations. Based on the positive values of apparent standard enthalpies (46.72–70.30 kJ mol−1) and apparent standard entropies (106.4–118.5 J mol−1 K−1), the dissolution of FXT was “endothermic and entropy-driven” in all {PEG 400 (1) + H2O (2)} mixtures examined. The main mechanism for FXT solvation in {PEG 400 (1) + H2O (2)} mixtures was discovered to be an enthalpy-driven process. In comparison to FXT-H2O, FXT-PEG 400 showed the strongest molecular interactions. In conclusion, these results suggested that PEG 400 has considerable potential for solubilizing a poorly soluble FXT in H2O. Full article
(This article belongs to the Special Issue Development and Application of Greener Organic Solvents)
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13 pages, 1916 KB  
Article
Entropy and Enthalpy Effects on Metal Complex Formation in Non-Aqueous Solvents: The Case of Silver(I) and Monoamines
by Andrea Melchior, Martina Sanadar, Rosita Cappai and Marilena Tolazzi
Entropy 2022, 24(9), 1253; https://doi.org/10.3390/e24091253 - 6 Sep 2022
Cited by 7 | Viewed by 3401
Abstract
Access to the enthalpy and entropy of the formation of metal complexes in solution is essential for understanding the factors determining their thermodynamic stability and speciation. As a case study, in this report we systematically examine the complexation of silver(I) in acetonitrile (AN) [...] Read more.
Access to the enthalpy and entropy of the formation of metal complexes in solution is essential for understanding the factors determining their thermodynamic stability and speciation. As a case study, in this report we systematically examine the complexation of silver(I) in acetonitrile (AN) with the following monoamines: n-propylamine (n-pr), n-butylamine (n-but), hexylamine (hexyl), diethylamine (di-et), dipropylamine (di-pr), dibutylamine (di-but), triethylamine (tri-et) and tripropylamine (tri-pr). The study shows that the complex stabilities are quite independent of the length of the substitution chain on the N atom and demonstrates that, in general, the overall enthalpy terms associated with the complex formation are strongly exothermic, whereas the entropy values oppose the complex formations. In addition, we examined the similarity of the formation constants of AgL complexes of the primary monoamines in AN, dimethylsulfoxide (DMSO) and water, which were unexpected on the basis of the difference between the donor properties of solvents. Full article
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13 pages, 2473 KB  
Article
Thermodynamics of π–π Interactions of Benzene and Phenol in Water
by Dooam Paik, Hankyul Lee, Hyungjun Kim and Jeong-Mo Choi
Int. J. Mol. Sci. 2022, 23(17), 9811; https://doi.org/10.3390/ijms23179811 - 29 Aug 2022
Cited by 9 | Viewed by 4296
Abstract
The π–π interaction is a major driving force that stabilizes protein assemblies during protein folding. Recent studies have additionally demonstrated its involvement in the liquid–liquid phase separation (LLPS) of intrinsically disordered proteins (IDPs). As the participating residues in IDPs are exposed to water, [...] Read more.
The π–π interaction is a major driving force that stabilizes protein assemblies during protein folding. Recent studies have additionally demonstrated its involvement in the liquid–liquid phase separation (LLPS) of intrinsically disordered proteins (IDPs). As the participating residues in IDPs are exposed to water, π–π interactions for LLPS must be modeled in water, as opposed to the interactions that are often established at the hydrophobic domains of folded proteins. Thus, we investigated the association of free energies of benzene and phenol dimers in water by integrating van der Waals (vdW)-corrected density functional theory (DFT) and DFT in classical explicit solvents (DFT-CES). By comparing the vdW-corrected DFT and DFT-CES results with high-level wavefunction calculations and experimental solvation free energies, respectively, we established the quantitative credibility of these approaches, enabling a reliable prediction of the benzene and phenol dimer association free energies in water. We discovered that solvation influences dimer association free energies, but not significantly when no direct hydrogen-bond-type interaction exists between two monomeric units, which can be explained by the enthalpy–entropy compensation. Our comprehensive computational study of the solvation effect on π–π interactions in water could help us understand the molecular-level driving mechanism underlying the IDP phase behaviors. Full article
(This article belongs to the Special Issue State-of-the-Art Physical Chemistry and Chemical Physics in Korea)
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22 pages, 2454 KB  
Article
Increasing the Equilibrium Solubility of Meloxicam in Aqueous Media by Using Dimethyl Sulfoxide as a Cosolvent: Correlation, Dissolution Thermodynamics and Preferential Solvation
by Darío A. Tinjacá, Fleming Martínez, Ovidio A. Almanza, M. Ángeles Peña, Abolghasem Jouyban and William E. Acree
Liquids 2022, 2(3), 161-182; https://doi.org/10.3390/liquids2030011 - 12 Aug 2022
Cited by 6 | Viewed by 3797
Abstract
Meloxicam is widely prescribed as an analgesic and anti-inflammatory drug in human therapeutics. Owing the very low aqueous solubility of meloxicam, this property has been studied in dimethyl sulfoxide (DMSO)-aqueous solvent systems at several temperatures from 273.15 to 313.15 K to expand the [...] Read more.
Meloxicam is widely prescribed as an analgesic and anti-inflammatory drug in human therapeutics. Owing the very low aqueous solubility of meloxicam, this property has been studied in dimethyl sulfoxide (DMSO)-aqueous solvent systems at several temperatures from 273.15 to 313.15 K to expand the solubility database about analgesic drugs in mixed solvents. The flask shake method followed by ultraviolet-visible (UV-vis) spectrophotometry analysis were used for meloxicam solubility determinations. A number of cosolvency models, including the Jouyban–Acree model, were challenged for solubility correlation/prediction of this drug in these mixtures. The van’t Hoff and Gibbs equations were employed to calculate the apparent standard thermodynamic quantities relative to dissolution and mixing processes. The inverse Kirkwood–Buff integral method was employed for calculating the preferential solvation parameters of meloxicam by DMSO in the mixtures. Meloxicam solubility increases with increasing temperature and maximum solubilities are observed in neat DMSO at all temperatures studied. Dissolution processes were endothermic in all cases and entropy-driven in the composition interval of 0.40 ≤ x1 ≤ 1.00. A nonlinear enthalpy–entropy relationship was observed in the plot of enthalpy vs. Gibbs energy for drug transfer processes. Meloxicam is preferentially solvated by water in water-rich mixtures but preferentially solvated by DMSO in the composition interval of 0.21 < x1 < 1.00. Full article
(This article belongs to the Special Issue Modeling of Liquids Behavior: Experiments, Theory and Simulations)
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23 pages, 4139 KB  
Article
Expanding the Equilibrium Solubility and Dissolution Thermodynamics of Benzoic Acid in Aqueous Alcoholic Mixtures
by Sema Akay, Berkant Kayan, M. Ángeles Peña, Abolghasem Jouyban, Fleming Martínez and William E. Acree
Reactions 2022, 3(3), 392-414; https://doi.org/10.3390/reactions3030028 - 1 Aug 2022
Cited by 6 | Viewed by 7891
Abstract
The equilibrium solubility of benzoic acid in water and ethanol, as well as in nine {ethanol (1) + water (2)} mixtures, was determined from T = (293.15 to 323.15) K. Benzoic acid mole fraction solubility in these aqueous-ethanolic mixtures was adequately correlated with [...] Read more.
The equilibrium solubility of benzoic acid in water and ethanol, as well as in nine {ethanol (1) + water (2)} mixtures, was determined from T = (293.15 to 323.15) K. Benzoic acid mole fraction solubility in these aqueous-ethanolic mixtures was adequately correlated with some well-known correlation/prediction models, obtaining mean percentage deviations of 2.2 to 7.6%. Apparent thermodynamic quantities, namely, Gibbs energy, enthalpy, and entropy, for the dissolution, mixing and solvation processes, were computed by means of the van ’t Hoff and Gibbs equations. The enthalpy–entropy compensation plot of apparent enthalpy vs. apparent Gibbs energy of dissolution was not linear, indicating enthalpy and entropy mechanisms for transfer. Ultimately, by using the inverse Kirkwood–Buff integrals, it is observed that benzoic acid is preferentially solvated by water molecules in water-rich mixtures but preferentially solvated by ethanol molecules in those {ethanol (1) + water (2)} mixtures of 0.24 < x1 < 1.00. Full article
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15 pages, 1766 KB  
Article
How to Catch the Ball: Fullerene Binding to the Corannulene Pincer
by Filipe Menezes and Grzegorz Maria Popowicz
Molecules 2022, 27(12), 3838; https://doi.org/10.3390/molecules27123838 - 15 Jun 2022
Cited by 6 | Viewed by 2395
Abstract
The corannulene pincer (also known in the literature as the buckycatcher) is a fascinating system that may encapsulate, among other molecules, the C60 and C70 fullerenes. These complexes are held together by strong π-stacking interactions. Although these are quantum mechanical effects, [...] Read more.
The corannulene pincer (also known in the literature as the buckycatcher) is a fascinating system that may encapsulate, among other molecules, the C60 and C70 fullerenes. These complexes are held together by strong π-stacking interactions. Although these are quantum mechanical effects, their description by quantum chemical methods has proved very hard. We used three semi-empirical methods, PM6-D3H4X, PM6-D3H+ and GFN2-xTB, to model the interactions. Binding to fullerenes was extended to all open conformations of the buckycatcher, and with the proper choice of solvation model and partition functions, we obtained Gibbs free energies of binding that deviated by 1.0–1.5 kcal/mol from the experimental data. Adding three-body dispersion to PM6-D3H+ led to even better agreement. These results agree better with the experimental data than calculations using higher-level methods at a significantly lower fraction of the computational cost. Furthermore, the formation of adducts with C60 was studied using dynamical simulations, which helped to build a more complete picture of the behavior of the corannulene pincer with fullerenes. We also investigated the use of exchange-binding models to recover more information on this system in solution. Though the final Gibbs free energies in solution were worsened, gas-phase enthalpies and entropies better mirrored the experimental data. Full article
(This article belongs to the Section Computational and Theoretical Chemistry)
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14 pages, 4242 KB  
Article
Entropy Effects in Intermolecular Associations of Crown-Ethers and Cyclodextrins with Amino Acids in Aqueous and in Non-Aqueous Media
by Tatyana Usacheva, Irina Terekhova, Diana Alister, Mikhail Agafonov, Natalya Kuranova, Dmitry Tyurin and Valentin Sharnin
Entropy 2022, 24(1), 24; https://doi.org/10.3390/e24010024 - 24 Dec 2021
Cited by 7 | Viewed by 3273
Abstract
The analysis of the ratios of entropy and enthalpy characteristics and their contributions to the change in the Gibbs energy of intermolecular interactions of crown ethers and cyclodextrins with amino acids is carried out. Two different types of macrocycles were chosen for examination: [...] Read more.
The analysis of the ratios of entropy and enthalpy characteristics and their contributions to the change in the Gibbs energy of intermolecular interactions of crown ethers and cyclodextrins with amino acids is carried out. Two different types of macrocycles were chosen for examination: crown ethers with a hydrophilic interior and cyclodextrins with a hydrophobic inner cavity and a hydrophilic exterior. The thermodynamics of complex formation of crown ethers and cyclodextrins with amino acids in water and aqueous-organic solvents of variable composition was examined. The contributions of the entropy solvation of complexes of 18-crown-6 with glycine, alanine, phenylalanine to the change in the entropy of complexation in water-ethanol and water-dimethyl sulfoxide solvents was calculated and analyzed. It was found that the ratios of the entropy and enthalpy solvation of the reagents for these systems have similar trends when moving from water to aqueous-organic mixtures. The relationship between the thermodynamic characteristics and structural features of the complexation processes between cyclodextrins and amino acids has been established. The thermodynamic enthalpy–entropy compensation effect was revealed, and its features for complexation of cyclodextrins and 18-crown-6 were considered. It was concluded that, based on the thermodynamic parameters of molecular complexation, one could judge the mode of the formation of complexes, the main driving forces of the interactions, and the degree of desolvation. Full article
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7 pages, 2409 KB  
Communication
Adsorption of Gas-Phase Cyclohexanone on Atmospheric Water Films
by Shangpeng Hao, Chao Sun, Yuanpeng Zhang, Haitao Wang, Wenbo Zhao, Xiaolu Wang and Jinghai Li
Atmosphere 2021, 12(12), 1705; https://doi.org/10.3390/atmos12121705 - 20 Dec 2021
Cited by 2 | Viewed by 2825
Abstract
The fate of atmospheric volatile organic compounds (VOCs) strongly depends on the partitioning processes on the surface of aerosols, which are coated with a thin water film. However, the behavior of VOCs in the aqueous film of aerosols is difficult to measure. In [...] Read more.
The fate of atmospheric volatile organic compounds (VOCs) strongly depends on the partitioning processes on the surface of aerosols, which are coated with a thin water film. However, the behavior of VOCs in the aqueous film of aerosols is difficult to measure. In this work, the interfacial partition constant of cyclohexanone was determined using a novel flow-tube reactor. A thin, aqueous film placed in the reactor was exposed to cyclohexanone gas. The subsequent partitioning was measured using chromatography techniques. The quality control tests were first conducted to ensure the accuracy of the adsorption experiments. The cyclohexanone concentration was then plotted as a function of film thickness to obtain the partitioning constants. As the thickness of the water film decreased, the aqueous concentration of cyclohexanone increased, indicating that surface adsorption played a dominant role in the uptake of cyclohexanone. According to the temperature dependence of the interfacial partition constant, the solvation enthalpy and entropy of cyclohexanone were obtained. The results of this study would help to elucidate the effect of atmospheric water film on the gas–aerosol partitioning of VOCs, and thus can help to better understand the fate of VOCs in the atmosphere. Full article
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