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Keywords = sugar porters

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15 pages, 7206 KB  
Article
Mosaic Evolution of Membrane Transporters in Galdieriales
by Claudia Ciniglia, Antonino Pollio, Elio Pozzuoli, Marzia Licata, Nunzia Nappi, Seth J. Davis and Manuela Iovinella
Plants 2025, 14(13), 2043; https://doi.org/10.3390/plants14132043 - 3 Jul 2025
Cited by 1 | Viewed by 1121
Abstract
Membrane transporters are vital for solute movement and localisation across cellular compartments, particularly in extremophilic organisms such as Galdieriales. These red algae thrive in geothermal and metal-rich environments, where adaptive transporter systems contribute to their metabolic flexibility. While inventories of transporter genes in [...] Read more.
Membrane transporters are vital for solute movement and localisation across cellular compartments, particularly in extremophilic organisms such as Galdieriales. These red algae thrive in geothermal and metal-rich environments, where adaptive transporter systems contribute to their metabolic flexibility. While inventories of transporter genes in the species Galdieria sulphuraria have previously been compiled, their phylogenetic origins remain incompletely resolved. Here, we conduct a comparative phylogenetic analysis of three transporter families—Major Facilitator Superfamily (MFS). Amino acid–Polyamine–Organocation (APC) and the natural resistance–associated macrophage protein (Nramp)—selected from overexpressed transcripts in G. sulphuraria strain SAG 107.79. Using sequences from six Galdieriales species and orthologs from diverse taxa, we reconstructed maximum likelihood trees to assess conservation and potential horizontal gene transfer (HGT). The MFS subfamilies revealed contrasting patterns: sugar porters (SPs) exhibited polyphyly and fungal affinity, suggesting multiple HGT events, while phosphate:H+ symporters (PHSs) formed a coherent monophyletic group. APC sequences were exclusive in G. sulphuraria and extremophilic prokaryotes, indicating a likely prokaryotic origin. In contrast, Nramp transporters were broadly conserved across eukaryotes and prokaryotes, showing no signs of recent HGT. Together, these findings highlight the mosaic evolutionary history of membrane transporters in Galdieriales, shaped by a combination of vertical inheritance and taxon-specific gene acquisition events, and provide new insight into the genomic strategies underpinning environmental resilience in red algae. Full article
(This article belongs to the Section Plant Molecular Biology)
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13 pages, 3139 KB  
Article
Brewers’ Spent Grain as an Alternative Plant Protein Component of Honey Bee Feed
by Paweł Migdał, Martyna Wilk, Ewelina Berbeć and Natalia Białecka
Agriculture 2024, 14(6), 929; https://doi.org/10.3390/agriculture14060929 - 12 Jun 2024
Cited by 1 | Viewed by 2533
Abstract
Bee organisms need nutrients to function properly. Deficiencies of any nutrients decrease the condition and shorten the lifespan of insects. Moreover, protein deficiency decreases honey bee queen productivity and increases aggression in bee colonies. All of these aspects affect the efficiency and the [...] Read more.
Bee organisms need nutrients to function properly. Deficiencies of any nutrients decrease the condition and shorten the lifespan of insects. Moreover, protein deficiency decreases honey bee queen productivity and increases aggression in bee colonies. All of these aspects affect the efficiency and the economic aspect of beekeeping production. Limited access to sustainable feed sources for bee colonies during the season forces beekeepers to search for new sources of nutrients, particularly protein. The aim of this study was to investigate the potential use of brewers’ spent grain, which is a by-product of beer production, as a source of protein additive in bees’ diet. Two types of brewers’ spent grain were examined: that from light beer and that from dark porter beer. The spent grains, especially porter spent grains, improved the hemolymph protein content compared to bees fed with sugar cake without additives. It did not fully correspond to the protein levels obtained from bees fed cake with the addition of pollen, but it may be a substitute. The studies showed that brewers’ spent grain has the potential to be used as an alternative plant protein component of honey bee feed. Full article
(This article belongs to the Special Issue Practices and Strategies for Sustainable Apiculture and Pollinators)
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19 pages, 3919 KB  
Article
To the Origin of Fungi: Analysis of MFS Transporters of First Assembled Aphelidium Genome Highlights Dissimilarity of Osmotrophic Abilities between Aphelida and Fungi
by Igor R. Pozdnyakov, Evgeniy V. Potapenko, Elena S. Nassonova, Vladislav V. Babenko, Daria I. Boldyreva, Victoria S. Tcvetkova and Sergey A. Karpov
J. Fungi 2023, 9(10), 1021; https://doi.org/10.3390/jof9101021 - 16 Oct 2023
Cited by 7 | Viewed by 3141
Abstract
Aphelids are a holomycotan group, represented exclusively by parasitoids infecting algae. They form a sister lineage to Fungi in the phylogenetic tree and represent a key group for reconstruction of the evolution of Holomycota and for analysis of the origin of Fungi. The [...] Read more.
Aphelids are a holomycotan group, represented exclusively by parasitoids infecting algae. They form a sister lineage to Fungi in the phylogenetic tree and represent a key group for reconstruction of the evolution of Holomycota and for analysis of the origin of Fungi. The newly assembled genome of Aphelidium insullamus (Holomycota, Aphelida) with a total length of 18.9 Mb, 7820 protein-coding genes and a GC percentage of 52.05% was obtained by a hybrid assembly based on Oxford Nanopore long reads and Illumina paired reads. In order to trace the origin and the evolution of fungal osmotrophy and its presence or absence in Aphelida, we analyzed the set of main fungal transmembrane transporters, which are proteins of the Major Facilitator superfamily (MFS), in the predicted aphelid proteomes. This search has shown an absence of a specific fungal protein family Drug:H+ antiporters-2 (DAH-2) and specific fungal orthologs of the sugar porters (SP) family, and the presence of common opisthokont’s orthologs of the SP family in four aphelid genomes. The repertoire of SP orthologs in aphelids turned out to be less diverse than in free-living opisthokonts, and one of the most limited among opisthokonts. We argue that aphelids do not show signs of similarity with fungi in terms of their osmotrophic abilities, despite the sister relationships of these groups. Moreover, the osmotrophic abilities of aphelids appear to be reduced in comparison with free-living unicellular opisthokonts. Therefore, we assume that the evolution of fungi-specific traits began after the separation of fungal and aphelid lineages, and there are no essential reasons to consider aphelids as a prototype of the fungal ancestor. Full article
(This article belongs to the Special Issue Early-Diverging Fungi)
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