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Keywords = vernalisation

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14 pages, 1952 KB  
Article
Evaluation of the Allelic Variations in Vernalisation (VRN1) and Photoperiod (PPD1) Genes and Genetic Diversity in a Spanish Spelt Wheat Collection
by Carmen Palomino and Adoración Cabrera
Int. J. Mol. Sci. 2023, 24(22), 16041; https://doi.org/10.3390/ijms242216041 - 7 Nov 2023
Cited by 6 | Viewed by 2156
Abstract
Allelic variation within genes controlling the vernalisation requirement (VRN1) and photoperiod response (PPD1) determines the adaptation of wheat to different environmental growing conditions as well as influences other traits related to grain yield. This study aimed to screen a [...] Read more.
Allelic variation within genes controlling the vernalisation requirement (VRN1) and photoperiod response (PPD1) determines the adaptation of wheat to different environmental growing conditions as well as influences other traits related to grain yield. This study aimed to screen a Spanish spelt wheat collection using gene-specific molecular markers for VRN-A1, VRN-B1, VRN-D1, and PPD-D1 loci and to phenotype for heading date (HD) in both field and greenhouse experiments under a long photoperiod and without vernalisation. Fifty-five spelt genotypes (91.7%) exhibited a spring growth habit, and all of them carried at least one dominant VRN1 allele, whereas five (8.3%) genotypes had a winter growth habit, and they carried the triple recessive allele combination. The Vrn-D1s was the most frequent allele in the studied set of spelt accessions, and it was found in combination with both the dominant Vrn-A1b and/or Vrn-B1a alleles in 88.3% of the spelt accessions tested. All spelt accessions carried the photoperiod-sensitive Ppd-D1b allele, which may explain the late heading of spelt germplasm compared to the commercial spring bread wheat Setenil used as a control. The least significant difference test showed significant differences between allelic combinations, the earliest accessions being those carrying two or three dominant alleles, followed by the one-gene combinations. In addition, the genetic diversity was evaluated through capillary electrophoresis using 15 wheat simple sequence repeat (SSR) markers. Most markers had high levels of polymorphism, producing 95 different alleles which ranged between 53 and 279 bp in size. Based on the polymorphic information content values obtained (from 0.51 to 0.97), 12 out of the 15 SSRs were catalogued as informative markers (values > 0.5). According to the dendrogram generated, the spelt accessions clustered as a separate group from the commercial bread wheat Setenil. Knowledge of VRN1 and PPD1 alleles, heading time, and genetic variability using SSR markers is valuable for spelt wheat breeding programs. Full article
(This article belongs to the Special Issue Wheat Genetics and Genomics 2.0)
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16 pages, 1485 KB  
Article
Genetic Mapping of Genotype-by-Ploidy Effects in Arabidopsis thaliana
by Cris L. Wijnen, Frank F. M. Becker, Andries A. Okkersen, C. Bastiaan de Snoo, Martin P. Boer, Fred A. van Eeuwijk, Erik Wijnker and Joost J. B. Keurentjes
Genes 2023, 14(6), 1161; https://doi.org/10.3390/genes14061161 - 26 May 2023
Cited by 2 | Viewed by 2035
Abstract
Plants can express different phenotypic responses following polyploidization, but ploidy-dependent phenotypic variation has so far not been assigned to specific genetic factors. To map such effects, segregating populations at different ploidy levels are required. The availability of an efficient haploid inducer line in [...] Read more.
Plants can express different phenotypic responses following polyploidization, but ploidy-dependent phenotypic variation has so far not been assigned to specific genetic factors. To map such effects, segregating populations at different ploidy levels are required. The availability of an efficient haploid inducer line in Arabidopsis thaliana allows for the rapid development of large populations of segregating haploid offspring. Because Arabidopsis haploids can be self-fertilised to give rise to homozygous doubled haploids, the same genotypes can be phenotyped at both the haploid and diploid ploidy level. Here, we compared the phenotypes of recombinant haploid and diploid offspring derived from a cross between two late flowering accessions to map genotype × ploidy (G × P) interactions. Ploidy-specific quantitative trait loci (QTLs) were detected at both ploidy levels. This implies that mapping power will increase when phenotypic measurements of monoploids are included in QTL analyses. A multi-trait analysis further revealed pleiotropic effects for a number of the ploidy-specific QTLs as well as opposite effects at different ploidy levels for general QTLs. Taken together, we provide evidence of genetic variation between different Arabidopsis accessions being causal for dissimilarities in phenotypic responses to altered ploidy levels, revealing a G × P effect. Additionally, by investigating a population derived from late flowering accessions, we revealed a major vernalisation-specific QTL for variation in flowering time, countering the historical bias of research in early flowering accessions. Full article
(This article belongs to the Special Issue Genetics and Breeding of Polyploid Plants)
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13 pages, 579 KB  
Review
COR/LEA Proteins as Indicators of Frost Tolerance in Triticeae: A Comparison of Controlled versus Field Conditions
by Klára Kosová, Miroslav Klíma, Ilja Tom Prášil and Pavel Vítámvás
Plants 2021, 10(4), 789; https://doi.org/10.3390/plants10040789 - 16 Apr 2021
Cited by 24 | Viewed by 3515
Abstract
Low temperatures in the autumn induce enhanced expression/relative accumulation of several cold-inducible transcripts/proteins with protective functions from Late-embryogenesis-abundant (LEA) superfamily including dehydrins. Several studies dealing with plants grown under controlled conditions revealed a correlation (significant quantitative relationship) between dehydrin transcript/protein relative accumulation and [...] Read more.
Low temperatures in the autumn induce enhanced expression/relative accumulation of several cold-inducible transcripts/proteins with protective functions from Late-embryogenesis-abundant (LEA) superfamily including dehydrins. Several studies dealing with plants grown under controlled conditions revealed a correlation (significant quantitative relationship) between dehydrin transcript/protein relative accumulation and plant frost tolerance. However, to apply these results in breeding, field experiments are necessary. The aim of the review is to provide a summary of the studies dealing with the relationships between plant acquired frost tolerance and COR/LEA transcripts/proteins relative accumulation in cereals grown in controlled and field conditions. The impacts of cold acclimation and vernalisation processes on the ability of winter-type Triticeae to accumulate COR/LEA proteins are discussed. The factors determining dehydrin relative accumulation under controlled cold acclimation treatments versus field trials during winter seasons are discussed. In conclusion, it can be stated that dehydrins could be used as suitable indicators of winter survival in field-grown winter cereals but only in plant prior to the fulfilment of vernalisation requirement. Full article
(This article belongs to the Special Issue Plant and Microbe Adaptations to Cold)
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18 pages, 1286 KB  
Article
Functional Traits, Morphology, and Herbage Production of Vernalised and Non-Vernalised Chicory cv. Choice (Cichorium intybus L.) in Response to Defoliation Frequency and Height
by Mancoba C. Mangwe, Racheal H. Bryant, Cristian A. Moreno García, Thomas M.R. Maxwell and Pablo Gregorini
Plants 2020, 9(5), 611; https://doi.org/10.3390/plants9050611 - 11 May 2020
Cited by 7 | Viewed by 3094
Abstract
Chicory (Cichorium intybus L.) used in pastoral systems has the attributes required of a forage species to reduce animal urinary nitrogen loading to soil, increase milk production, and enhance milk fatty acid profile to improve pastoral farm systems for matching increasing global [...] Read more.
Chicory (Cichorium intybus L.) used in pastoral systems has the attributes required of a forage species to reduce animal urinary nitrogen loading to soil, increase milk production, and enhance milk fatty acid profile to improve pastoral farm systems for matching increasing global demand for dairy products and environmental standards of livestock systems. Greater adoption of chicory requires confidence in management decisions that can control risks to farm production, namely bolting after vernalisation or a decline in persistence of chicory swards, which have slowed its adoption in pastoral systems. We, therefore, measured functional traits, morphology and herbage production of chicory under irrigated field conditions before and after vernalisation in Canterbury, New Zealand. The experimental site was laid out in a complete randomized block design with four replications where two regrowth intervals and two defoliation heights were applied. Regrowth interval had a stronger influence over functional traits and herbage production than defoliation height, with more pronounced effects after vernalisation. Plants managed under shorter regrowth intervals had narrower roots with lower concentration of sugars than plants under longer intervals, which might compromise their longevity. In addition, plants managed under shorter intervals remained mostly vegetative with heavier and longer leaves, though with reduced photosynthetic capacity than those managed under longer intervals. The thermal time to initiate stem elongation in plants managed under longer intervals was ~274 growing degree-days, with a mean stem elongation rate increasing linearly at 1.4 ± 0.08 mm/growing degree-days. The key outcomes of this research quantify the growing degree-days to initiate stem elongation post vernalisation, which provides management directive for timing of defoliation of chicory in order to maintain feed quality for grazing livestock. Alternating frequent and infrequent defoliation regimes might be used to optimise vegetative growth, root reserves, and pasture persistence. Full article
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16 pages, 2944 KB  
Article
Susceptibility of Winter Wheat and Triticale to Yellow Rust Influenced by Complex Interactions between Vernalisation, Temperature, Plant Growth Stage and Pathogen Race
by Julian Rodriguez-Algaba, Chris K. Sørensen, Rodrigo Labouriau, Annemarie F. Justesen and Mogens S. Hovmøller
Agronomy 2020, 10(1), 13; https://doi.org/10.3390/agronomy10010013 - 20 Dec 2019
Cited by 15 | Viewed by 5920
Abstract
Environmental factors influence the disease susceptibility of crop plants. In this study, we established an experimental system to investigate the effects of vernalisation, temperature and plant growth stage on the susceptibility of winter wheat and winter triticale to Puccinia striiformis, the causal [...] Read more.
Environmental factors influence the disease susceptibility of crop plants. In this study, we established an experimental system to investigate the effects of vernalisation, temperature and plant growth stage on the susceptibility of winter wheat and winter triticale to Puccinia striiformis, the causal agent of yellow (stripe) rust. Two temperature regimes: standard (18 °C day/12 °C night) and low (12 °C day/6 °C night), vernalised and non-vernalised seedlings, vernalised adult plants and two pathogen races were investigated. At low temperatures, vernalisation reduced the susceptibility of seedlings exposed to the ‘Warrior’ race, while this was only the case for five out of eight varieties exposed to the ‘Kranich’ race. Changing from standard to low temperature resulted in increased susceptibility of non-vernalised seedlings of seven varieties inoculated with the ‘Warrior’ race and five varieties inoculated with the ‘Kranich’ race. Increased susceptibility at low temperature was also detected for several varieties at the adult plant growth stage. Comparisons between vernalised seedlings and adult plants revealed an effect of plant growth stage on disease susceptibility (e.g., Adult Plant Resistance) in five varieties at standard temperature for the ‘Warrior’ race and in five and four varieties at standard and low temperature respectively, for the ‘Kranich’ race. The complex and unpredictable interactions between environment and pathogen influencing yellow rust susceptibility of individual varieties stress the importance of phenotyping for disease resistance under different environmental conditions and pathogen populations. The environmental impact on rust susceptibility should also be taken into account in early-warning systems targeting wheat and triticale breeding programmes and growers. Full article
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20 pages, 3198 KB  
Article
Agrobiodiversity for Adaptive and Yield Traits in Romanian and Italian Barley Cultivars across Four Continental Environments
by Fulvia Rizza, Liliana Vasilescu, Franz-W. Badeck, Caterina Morcia, Renzo Alberici, Alexandru Bude, Eliana Alionte, Eugen Petcu, Marina Baronchelli, Nadia Faccini, Donata Pagani and Valeria Terzi
Agronomy 2018, 8(6), 79; https://doi.org/10.3390/agronomy8060079 - 23 May 2018
Cited by 4 | Viewed by 4143
Abstract
Within temperate climates the frequency and severity of high and low temperature stresses vary with continentality. The current study reports on the assessment of the performance of 49 barley cultivars across four environments. The cultivars stem from 50 years of breeding activities in [...] Read more.
Within temperate climates the frequency and severity of high and low temperature stresses vary with continentality. The current study reports on the assessment of the performance of 49 barley cultivars across four environments. The cultivars stem from 50 years of breeding activities in Romania and Italy, in two temperate climates that differ in continentality. The plants were phenotyped through stress monitoring, measurements of yield and yield related traits as well as laboratory stress tolerance tests. Genotypes for alleles of vernalisation and photoperiod genes were determined. These genes were significantly associated with frost damage in the field and frost tolerance in laboratory tests. Grain yield (GY) was more closely correlated with the number of grain sinks than with the degree of grain filling indicating major limitations in the vegetative growth phase and during grain initiation. High temperature stress during the grain filling phase significantly reduced GY. Frost damage due to freezing temperatures below −10 °C when plants were not protected by snow cover significantly reduced GY of sensitive cultivars. The characterisation of environmental cues that cause stresses with yield penalties as well as the susceptibility of genetically different cultivars lay the ground for future targeted selection. Full article
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