Search Results (601)

Bats are ecologically vital mammals, serving as pollinators, seed dispersers, and bioindicators of ecosystem health. Many species inhabit natural caves, which offer optimal conditions for survival but present challenges for direct ecological monitoring due to their dark, complex, and inaccessible environments. Traditional monitoring methods, such as mist-netting, are invasive and limited in scope, highlighting the need for non-intrusive alternatives. In this work, we present a portable multisensor platform designed to operate in underground habitats. The system captures multimodal data, including near-infrared (NIR) imagery, ultrasonic audio, 3D structural data, and RGB video. Focusing on NIR imagery, we evaluate the effectiveness of the YOLO object detection framework for automated bat detection and counting. Experiments were conducted using a dataset of NIR images collected in natural shelters. Three YOLO variants (v10, v11, and v12) were trained and tested on this dataset. The models achieved high detection accuracy, with YOLO v12m reaching a mean average precision (mAP) of 0.981. These results demonstrate that combining NIR imaging with deep learning enables accurate and non-invasive monitoring of bats in challenging environments. The proposed approach offers a scalable tool for ecological research and conservation, supporting population assessment and behavioral studies without disturbing bat colonies. Full article

The use of drones for monitoring mammal populations has increased in recent years due to their relatively low cost, accessibility, and ability to survey large areas quickly and efficiently. The type of drone sensor used during surveys can significantly influence species detection probability. For arboreal mammals, thermal infrared (TIR) sensors are commonly used because they can detect heat signatures of canopy-dwelling species. However, drones equipped with TIR cameras are more expensive and thus less accessible to conservation practitioners who often work with limited funding compared to drones equipped exclusively with standard visual spectrum cameras (Red, Green, Blue; RGB drones). Although RGB drones may represent a viable low-cost alternative for wildlife monitoring, their effectiveness for monitoring arboreal mammals remains poorly understood. Our objective was to evaluate the use of RGB drones for monitoring arboreal mammals, focusing on Geoffroy’s spider monkeys (Ateles geoffroyi) and southern muriquis (Brachyteles arachnoides). We used pre-programmed flights for spider monkeys and manual flights for muriquis, selecting the most suitable method according to the landscape characteristics of each study site; flat terrain with relatively homogeneous forest canopy height and mountainous forests with highly variable canopy height, respectively. We detected spider monkeys in only 0.4% of the 232 flights, whereas we detected muriquis in 6.2% of the 113 flights. Considering that both species are highly arboreal, use the upper canopy, and share similar locomotion patterns and group size, differences in detectability are more likely related to the type of drone flights used in each case study than to species differences. Preprogrammed flights allow for systematic and efficient area coverage but limit real-time adjustments to environmental conditions such as wind, canopy structure, and visibility. In contrast, manual flights offer greater flexibility, with pilots being able to adjust speed, height, and flight path as needed and spend more time over specific areas to conduct a more exhaustive search. This flexibility likely contributed to the higher detection rate observed in the muriqui study, but detectability was still low. The findings of the two studies suggest that RGB drones are better suited as a complementary tool rather than a primary method for monitoring arboreal mammals in dense forest habitats. Nonetheless, RGB drones offer valuable opportunities for other applications, and we highlight several examples of their potential utility in arboreal mammal research and conservation. Full article

Illegal wildlife trade is a major global driver of biodiversity loss, shaped by high consumer demand, transboundary networks, and uneven enforcement. In the Middle East, particularly the Gulf Cooperation Council (GCC) region, factors such as high purchasing power, cultural traditions (e.g., falconry, prestige pets), and expanding digital marketplaces sustain both legal and illegal flows. We present a nine-year (2017–2025) assessment based on weekly, repeated field surveys at the Friday Market, adjacent pet shops, and private farms, complemented by systematic monitoring of online advertisements on Haraj.com.sa. We recorded 1063 individual animals across 88 species, birds (39.4%), reptiles (52.0%), and mammals (8.6%), and analyzed prices, conservation status, and venue-specific patterns. The most frequently recorded taxa included the white-eared bulbul (Pycnonotus leucotis), common slider (Trachemys scripta), and Egyptian mastigure (Uromastyx aegyptia). Mammals, though fewer in number, commanded the highest prices, particularly cheetahs (Acinonyx jubatus) and lions (Panthera leo). About 26% of species were IUCN-listed as threatened, with CITES Appendix I taxa fetching higher prices. Findings underscore the need for real-time monitoring, targeted enforcement, and cross-border collaboration to address escalating trade in rare and protected species. Full article

Hemoparasites are blood-borne parasites transmitted by vectors and are commonly found in wild birds worldwide. The most frequently reported genera include Plasmodium, Haemoproteus, Leucocytozoon, and Trypanosoma, while filarial worms and other hemoparasites are less frequently reported. Despite their importance, knowledge of their effects on the health of wild birds remains limited. This systematic review summarizes all scientific findings on hemoparasites in wild birds, emphasizing their implications for host health. The literature reveals a high number of articles in this area in recent decades, reflecting a growing concern about hemoparasites in wildlife and their ecological impact. However, studies remain unevenly distributed across regions and bird taxa. Diagnostic limitations, particularly in fieldwork and wildlife rehabilitation, continue to present challenges for the accurate detection and monitoring of these parasites. Nevertheless, molecular tools have advanced our understanding of parasite diversity and host–parasite dynamics. Our work highlights key knowledge gaps and stresses the need for further research to improve the understanding of the role of hemoparasites in avian ecology, particularly concerning environmental change and emerging infectious diseases. Full article

AlUla, a unique conservation and tourism hub in Saudi Arabia, is undergoing extensive biodiversity restoration efforts, including the reintroduction of threatened wild species. However, interactions among wildlife, domestic, and synanthropic animals in these reserves raise significant concerns about disease transmission to reintroduced species. This study aimed to assess disease risks at the domestic–synanthropic–wildlife interface and identify infectious diseases posing the greatest threat to reintroduced species. A multi-phased prioritization system was developed to guide monitoring based on transmissibility to protected wildlife, susceptibility of reintroduced species, reservoir hosts, vector-borne potential, likelihood of occurrence, and disease severity. A comprehensive expert review identified 61 diseases important to the reintroduced wildlife. From this, 11 priority pathogens were selected for monitoring. A total of 7760 samples were collected from 1367 domestic and synanthropic animals and were analyzed using Real-Time PCR and/or ELISA. All priority pathogens, or prior exposure to these pathogens, were detected. Disease presence was affected by factors such as species, location, health status, and grazing habits. Taken together, these findings underscore the need for robust preventive measures to mitigate disease transmission risks and ensure the sustainability of AlUla’s conservation initiatives. This study also offers a model approach to support reintroduction programs and guide future conservation efforts. Full article

While wild boars (Sus scrofa) can act as hosts and reservoirs for various tick-borne pathogens, including Babesia spp. and Anaplasma spp., relevant data from Romania remain scarce. This study aimed to detect these agents in blood samples collected from 321 wild boars across nine Romanian counties between 2021 and 2024. Molecular screening using real-time PCR revealed a prevalence of 6.85% for Babesia spp. and 9.34% for Anaplasma spp. Sequencing confirmed the presence of Anaplasma phagocytophilum in four randomly selected positive samples, and the results for Babesia spp. represent the first detection of these pathogens in Romanian wild boars. These findings indicate that wild boars could contribute to the maintenance of tick-borne pathogens in natural ecosystems, and might represent a source of infection for other animals or even humans. The presented data can serve as a baseline for future comparative studies and may guide targeted control measures to reduce the potential spread of tick-borne pathogens through wild boar populations in Romania. Ongoing molecular monitoring, together with more detailed species identification, will help to clarify the epidemiological relevance of these pathogens and support effective wildlife and public health strategies in Romania. Full article

Emerging infectious diseases, particularly those of zoonotic origin, often originating from wildlife reservoirs represent a growing threat to global health. Human-driven environmental changes such as habitat fragmentation, climate change, and urban expansion have intensified interactions at the wildlife–domestic animal–human interface, facilitating cross-species viral transmission. Despite their epidemiological importance, systematic virological surveillance of wildlife remains challenging. In this study, we employed shotgun metagenomic sequencing to characterize the virome of wild animals rescued in the Pisa area and hospitalized at the “Mario Modenato” Veterinary Teaching Hospital (VTH) at the University of Pisa. Fecal samples collected from injured wildlife admitted between September 2020 and September 2021 were analyzed to detect both known and novel viruses. This approach builds upon previous PCR-based investigations of the same biological material, enabling a more comprehensive assessment of viral diversity. We adopted a shotgun approach for analyzing six sample pools—four were positive for at least one viral target—identifying diverse viral families, including Astroviridae, Circoviridae, Picornaviridae, Adenoviridae, and Retroviridae, in asymptomatic wildlife admitted to a veterinary hospital, highlighting their potential role as reservoirs. Our findings provide insights into the influence of environmental and anthropogenic factors on wildlife virome composition and highlight the value of hospital-based sampling strategies for urban viral surveillance. The results contribute to the development of integrated monitoring and prevention strategies within a One Health framework. Full article

Antimicrobial resistance (AMR) poses an increasing threat to public health, with wildlife recognized as reservoirs and vectors of resistant bacteria. However, the role of wild species in the ecology of AMR remains insufficiently understood, highlighting the need to investigate resistant bacteria in these animals. This study focused on detecting and characterizing Escherichia coli obtained from 43 fecal samples of white storks (Ciconia ciconia), cattle egrets (Bubulcus ibis), and European hedgehogs (Erinaceus europaeus) admitted to a wildlife rehabilitation center in Portugal. Resistance profiles to twelve antibiotics and six virulence factors were characterized phenotypically. ESBL production was also tested. A total of 79 E. coli isolates were obtained from 39 out of 43 samples, and 75 were selected for further characterization. All isolates tested negative for ESBL production. Approximately 64% (n = 48/75) of isolates were resistant to at least one antibiotic, and 5.3% (n = 4/75) were multidrug-resistant. Most frequent resistances were to ampicillin (36%, n = 27/75), tetracycline (12%, n = 9/75), and chloramphenicol (8%), while all isolates were susceptible to meropenem, aztreonam, and third-generation cephalosporins. Most isolates (81.3%, n = 61/75) lacked virulence factors. These findings suggest that wildlife may act as a reservoir of resistant strains, emphasizing importance of AMR monitoring and the One Health approach. Full article

Understanding the integration of newly recorded species into forest ecosystems is essential for evaluating their ecological impacts on native wildlife diversity. In this study, we examined the spatial and temporal niche dynamics of three sympatric squirrel species within the Labagoumen nature reserve, a temperate forest located in northern China. Particular emphasis was placed on the recently documented Eurasian red squirrel (Sciurus vulgaris) and its potential interactions with two native species: Père David’s rock squirrel (Sciurotamias davidianus) and the Siberian chipmunk (Tamias sibiricus). Using camera trapping data from 91 sites (2019–2024), we examined habitat use, activity rhythms, and niche overlap under contrasting levels of human disturbance. A total of 3419 independent effective photos of squirrels were recorded. S. vulgaris showed a broader spatial distribution and a higher relative abundance index (RAI) in the tourist area, while native species were more abundant in the non-tourist area. All three species showed similar annual activity patterns based on the monthly relative abundance index (MRAI), although native species exhibited an additional activity peak in June–July. Temporal niche overlap (C_ih) and the coefficient of overlap (Δ) between S. vulgaris and native species increased during the tourist season, suggesting synchronized activity under high disturbance. In contrast, lower overlap in the non-tourist season indicated stronger temporal partitioning. The daily activity rhythm of S. vulgaris remained stable, while native species displayed more variability, especially in non-tourist areas. S. vulgaris also exhibited a significantly broader spatial niche breadth (B_i), suggesting greater habitat exploitation and adaptability. Non-metric multidimensional scaling (NMDS) revealed no significant spatial segregation among the three species, indicating successful integration of S. vulgaris into the local community. Our findings emphasize the competitive advantage of S. vulgaris and demonstrate how human activities can restructure forest small mammal assemblages by altering spatiotemporal niche partitioning. We recommend long-term ecological monitoring to assess species diversity changes and guide adaptive conservation strategies. Full article

Hares (Lepus europaeus and Lepus timidus) play important ecological and economic roles in Kazakhstan; however, data on their parasitic fauna are scarce. This study aimed to assess the diversity, prevalence, and genetic characteristics of endoparasites in wild hare populations from central and northern Kazakhstan. From November 2022 to February 2025, 107 hares (L. europaeus, n = 46; L. timidus, n = 61) were collected in the Akmola and Karaganda regions. Parasitological and coprological analyses were conducted. Genetic and phylogenetic analyses were performed using partial sequences of the mitochondrial cox1 and nad1 genes and a partial 28S rDNA region to assess the genetic diversity and evolutionary relationships of selected parasite genera. Seven parasite taxa were identified: Mosgovoyia pectinata (6.5% in L. europaeus, 11.5% in L. timidus), Cysticercus pisiformis (4.3% in Le, 3.3% in Lt), Coenurus serialis (3.3%, only in Lt), Passalurus ambiguus (6.5% in Le, 4.9% in Lt), Nematodirus leporis (36.6% in Le, 13.4% in Lt), Eimeria spp. (9.1% in Le, 3.8% in Lt), and Trichuris leporis (1.9%, only in Lt). Genetic methods confirmed species identity and revealed phylogenetic relationships. This is the first genetically confirmed survey of endoparasites in hares in Kazakhstan. The results contribute valuable data to regional parasitology and support the need for continued wildlife health monitoring. Full article

Background/Objectives: Loss and fragmentation of habitat from agricultural conversion led to the near extirpation of the pygmy rabbit (Brachylagus idahoensis Merriam, 1891) population in the Columbia Basin (CB) of Washington, USA. Recovery efforts began in 2002 and included captive breeding, translocations from other regions for genetic rescue, and reintroduction into native habitat in three sites: Sagebrush Flat (SBF), Beezley Hills (BH), and Chester Butte (CHB). Methods: We used noninvasive and invasive genetic sampling to evaluate demographic and population genetic parameters on three translocated populations of pygmy rabbits over eight years (2011–2020). For each population, our goal was to use fecal DNA sampling and 19 microsatellite loci to monitor spatial distribution, apparent survival rates, genetic diversity, reproduction, effective population size, and the persistence of CB ancestry. Over the course of this study, 1978 rabbits were reintroduced as part of a cooperative conservation effort between state and federal agencies. Results: Through winter and summer monitoring surveys, we detected 168 released rabbits and 420 wild-born rabbits in SBF, 13 released rabbits and 2 wild-born in BH, and 16 released rabbits in CHB. Observed heterozygosity (H_o) values ranged from 0.62–0.84 (SBF), 0.59–0.80 (BH), and 0.73–0.77 (CHB). Allelic richness (AR) ranged from 4.67–5.35 (SBF), 3.71–5.41 (BH), and 3.69–4.65 (CHB). Effective population (N_e) within SBF varied from 12.3 (2012) to 44.3 (2017). CB ancestry persisted in all three wild populations, ranging from 15 to 27%. CB ancestry persisted in 99% of wild-born juveniles identified in SBF. Apparent survival of juvenile rabbits differed across years (1–39%) and was positively associated with release date, release weight, and genetic diversity. Survival of adults (0–43%) was positively influenced by release day, with some evidence that genetic diversity also positively influenced adult apparent survival. Conclusions: Noninvasive genetic sampling has proven to be an effective and efficient tool in monitoring this reintroduced population, assessing both demographic and genetic factors. This data has helped managers address the goals of the Columbia Basin recovery program of establishing multiple sustainable wild populations within the sagebrush steppe habitat of Washington. Full article

Migratory birds play a key role in the ecology of tick-borne pathogens, serving as both hosts for ticks and as potential carriers of a wide range of infectious agents that can affect wildlife, domestic animals, and humans. Their long-distance movements contribute to the dispersal of ticks and the pathogens they harbor, with potential implications for the emergence and spread of zoonotic disease. This study focuses on the prevalence of Rickettsia spp. and Babesia/Theileria spp. in ticks collected from migratory birds in Sardinia, Italy, during two consecutive migration seasons (April–May and October–November 2021), corresponding to the spring and autumn migratory periods. A total of 961 ticks, primarily Ixodes ricinus, was collected from various bird species. Molecular analyses using polymerase chain reaction (PCR) and sequencing enabled the detection and identification of multiple Rickettsia species, with R. helvetica, R. monacensis, and R. aeschlimannii being the most frequently identified. Protozoan pathogens, including B. venatorum and Theileria ovis, were also detected in the tick samples. These findings underscore the diversity of pathogens in bird-associated ticks and the role of migratory birds in the geographical spread of these diseases. These results also provide valuable insights into pathogen transmission dynamics and stress the importance of monitoring migratory birds to assess and mitigate the risks of zoonotic diseases. Further research is needed to clarify the ecological interactions among birds, ticks, and pathogens across different geographic regions. Full article

Bovine viral diarrhea virus (BVDV) is a globally significant pathogen affecting both domestic livestock and wildlife, including white-tailed deer (WTD; Odocoileus virginianus). While experimental infections have demonstrated WTD susceptibility to BVDV, natural infections and associated reproductive outcomes remain scarcely documented. Here, we report the first confirmed case of naturally occurring BVDV-1 infection associated with fetal mummification in farmed WTD in Florida. A two-year-old doe experienced a stillbirth involving two mummified fetuses, which were submitted for necropsy and laboratory diagnostics. Gross findings included diarrhea and underdeveloped eyes in the fetuses, along with small white nodules indicative of amnion nodosum. While not harmful, this condition suggests underlying fetal compromise or intrauterine stress. Virus isolation using Vero E6 and bovine turbinate cell lines, along with a reverse transcription PCR (RT-PCR) assay specifically developed in this study, confirmed the presence of BVDV-1 (Pestivirus bovis) RNA in both maternal and fetal samples, suggesting vertical transmission. Sanger sequencing of RT-PCR amplicons further verified the virus species as BVDV-1. Differential diagnostics for other pathogens, including bluetongue virus, epizootic hemorrhagic disease virus, Mycobacterium spp., and Toxoplasma gondii, were negative. These findings underscore the importance of using biosecurity measures and including BVDV in the differential diagnosis of abortions to reduce the risk of BVDV transmission and potential outbreaks on deer farms, particularly those close to cattle operations. The molecular tools developed in this study provide a robust framework for improved detection and monitoring of BVDV in both wildlife and livestock populations. Full article

The extreme conditions of polar and mountain regions foster uniquely adapted wildlife. Given that climate shifts are more extreme in those regions, monitoring animal species is essential for effective conservation measures. Earth observation data offer considerable advantages in areas that are difficult to reach using traditional ground-based methods. This systematic review, based on 145 SCI-journal publications between 2000 and 2024, examines how Earth observation is used in wildlife ecology research in these regions. We give an extensive overview of the Earth observation sensors used, spatial and temporal resolution of studies, studied animal species, methods used, amount of aerial imagery linked to satellite-based Earth observation, and research objectives. Bird (52 studies) and ungulate (38 studies) species are primarily investigated in relation to animal monitoring, distribution and foraging behavior. Products of Landsat (63 studies) and MODIS (52 studies) are used in most reviewed studies, but the potential of freely available, higher spatial and temporal resolution data like Sentinel-2 (seven studies), as well as AI methods are not yet fully utilized. Linking Earth observation data in polar and mountain regions to wildlife ecology research should be facilitated by encouraging interdisciplinary working groups. Two major crises can be tackled at once, climate change and biodiversity loss. Full article

Rhabditis (Rhabditella) axei is a predominantly free-living nematode commonly found in sewage systems and decomposing organic matter. While primarily saprophytic, it has been documented as an opportunistic pathogen in human urinary and gastrointestinal tracts. The Chinese red panda (Ailurus styani), a rare and protected species in China, has not previously been reported as a host for Rhabditis (Rhabditella) spp. infections. This study reports the first documented occurrence of R. axei in red panda feces, unambiguously confirmed through integrative taxonomic approaches combining morphological and molecular analyses. The nematodes exhibited key morphological features consistent with R. axei, including a cylindrical rhabditiform esophagus, sexually dimorphic tail structures, and diagnostic spicule morphology. Molecular analysis based on 18S-ITS-28S rDNA sequencing confirmed their identity, showing >99% sequence similarity to R. axei reference strains (GenBank: PP135624.1, PP135622.1). Phylogenetic reconstruction using 18S rDNA and ITS rDNA sequences placed the isolate within a well-supported R. axei clade, clearly distinguishing it from related species such as R. blumi and R. brassicae. The findings demonstrate the ecological plasticity of R. axei as a facultative parasite capable of infecting non-traditional hosts and further highlight potential zoonotic risks associated with environmental exposure in captive wildlife populations. Our results emphasize the indispensable role of molecular diagnostics in accurately distinguishing morphologically similar nematodes within the Rhabditidae family, while providing essential baseline data for health monitoring in both in situ and ex situ conservation programs for this endangered species. Full article