Synthesis of Pyrrolidine Monocyclic Analogues of Pochonicine and Its Stereoisomers: Pursuit of Simplified Structures and Potent β-N-Acetylhexosaminidase Inhibition
Abstract
:1. Introduction
2. Results and Discussion
2.1. Synthesis of 1-N-Acetylamino-2,5-Imino-1,2,5-Trideoxy-l-Mannitol hydrochloride (A-10)
2.2. Synthesis of 1-Amino and 1-N-Acetylamino Modified Pyrrolidine Stereoisomers
2.3. Glycosidase Inhibition
3. Materials and Methods
3.1. General Methods
3.2. Material and Methods for the Enzyme Inhibition Assay
3.3. Chemistry
3.3.1. General Procedure for Synthesis of Hydroxylamines A-2, B-2, C-2, D-2, E-2a, E-2b, F-2a, F-2b, G-2 and H-2 with A-2 as an Example
3.3.2. General Procedure for Synthesis of Hydroxylamines A-3, B-3, C-3, D-3, E-3a, E-3b, F-3a, F-3b, G-3 and H-3 with A-3 as an Example
3.3.3. Synthesis of (2S,3S,4S,5S)-3,4-bis(benzyloxy)-5-(benzyloxymethyl)-2-cyano-pyrrolidine (A-6)
3.3.4. Synthesis of tert-butyl-(2S,3S,4S,5S)-2-(aminomethyl)-3,4-bis(benzyloxy)-5-(benzyloxy methyl)pyrrolidine-1-carboxylate (A-8)
3.3.5. Synthesis of tert-butyl-(2S,3S,4S,5S)-2-N-acetylaminomethyl-3,4-bis(benzyloxy)-5-(benzyloxymethyl)pyrrolidine-1-carboxylate (A-9)
3.3.6. General Procedure for Synthesis of Compounds A-5, B-5, C-5, D-5, E-5a, E-5b, F-5a, F-5b, G-5 and H-5 with A-5 as an Example
3.3.7. General Procedure for Synthesis of 1-N-Acetylamino Derivatives (A-10, 4·HCl, C-10, D-10, E-10a, E-10b, F-10a, F-10b, G-10 and H-10) and 1-Amino Derivatives (A-11, B-11, C-11, D-11, E-11a, E-11b, F-11a, F-11b, G-11 and H-11) with A-10 as an Example
4. Conclusions
Supplementary Materials
Author Contributions
Funding
Conflicts of Interest
References
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Sample Availability: Samples of the compounds are not available from the authors. |
Entry | Cyclic Nitrone | Hydroxylamine | Diamine | Monoacetylated Pyrrolidine | 1-Amino Product | 1-N-Acetylamino Product |
---|---|---|---|---|---|---|
1 | ||||||
2 | ||||||
3 | ||||||
4 | ||||||
5 | ||||||
6 | ||||||
7 | ||||||
8 |
Enzyme | IC50 (μM) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
A-10 | 4·HCl | C-10 | D-10 | E-10a | F-10a | E-10b | F-10b | G-10 | H-10 | Pochonicine (1) | |
α-Glucosidase | |||||||||||
Yeast | NIa (0.5%)b | 450 | NI (0%) | NI (0%) | NI (0%) | NI (6.91%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | —c |
Rice | 568 | 1000 | NI (18.2%) | NI (26.1%) | NI (15.9%) | NI (12.5%) | NI (0%) | NI (0%) | NI (0%) | NI (5.6%) | — |
Rat intestinal maltase | 92 | 211 | NI (35.4%) | NI (9.24%) | NI (12.7%) | NI (14.6%) | NI (0%) | NI (12.7%) | NI (16.0%) | NI (13.6%) | — |
β-Glucosidase | |||||||||||
Almond | NI (16.1%) | 170 | NI (0%) | NI (41.0%) | NI (37.9%) | NI (11.6%) | NI (1.2%) | NI (19.8%) | NI (15.3%) | NI (17.1%) | — |
Bovine liver | NI (2.0%) | NI (33.8%) | NI (1.0%) | NI (2.4%) | NI (4.1%) | NI (0.3%) | NI (0%) | NI (0%) | NI (0%) | NI (1.7%) | — |
α-Galactosidase | |||||||||||
Coffee beans | NI (0%) | NI (1.1%) | NI (0.36%) | 380 | NI (0.36%) | NI (0.36%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | — |
β-Galactosidase | |||||||||||
Bovine liver | NI (1.6%) | 511 | NI (1.3%) | NI (3.3%) | NI (4.9%) | NI (4.2%) | NI (3.9%) | NI (4.2%) | NI (2.9%) | NI (3.6%) | — |
α-Mannosidase | |||||||||||
Jack bean | NI (0%) | NI (0%) | NI (0.4%) | 205 | NI (0.7%) | NI (0%) | NI (3.8%) | NI (1.6%) | NI (4.0%) | NI (9.5%) | — |
β-Mannosidase | |||||||||||
Snail | NI (0%) | 296 | NI (0%) | NI (0%) | NI (25.8%) | NI (3.23%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | — |
α-l-Fucosidase | |||||||||||
Bovine kidney | NI (0%) | NI (1.5%) | NI (4.9%) | NI (1.7%) | NI (41.7%) | NI (8.4%) | NI (20.5%) | NI (3.9%) | NI (11.5%) | NI (22.3%) | — |
α,α-Trehalase | |||||||||||
Porcine kidney | NI (4.3%) | NI (20.3%) | NI (0%) | NI (0%) | NI (5.6%) | NI (3.0%) | NI (0%) | NI (0%) | NI (5.6%) | NI (40.9%) | — |
Amyloglucosidase | |||||||||||
A. niger | NI (5.5%) | NI (40.6%) | NI (1.9%) | NI (3.8%) | NI (4.0%) | NI (2.8%) | NI (6.4%) | NI (5.7%) | NI (7.6%) | NI (8.3%) | — |
α-l-Rhamnosidase | |||||||||||
P. decumbens | NI (10.1%) | NI (6.5%) | NI (3.6%) | NI (8.3%) | NI (11.8%) | NI (5.3%) | NI (30.8%) | NI (3.0%) | NI (9.5%) | NI (7.7%) | — |
β-Glucuronidase | |||||||||||
E. coli | NI (0%) | NI (0.6%) | NI (0.3%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | — |
Bovine liver | NI (4.6%) | NI (1.7%) | NI (0%) | NI (1.3%) | NI (0%) | NI (0%) | NI (4.3%) | NI (0%) | NI (0%) | NI (0%) | — |
β-N Acetylhexosaminidase | |||||||||||
Bovine liver | 943 | 4.7 | NI (36.3%) | 2.8 | 95 | NI (23.2%) | NI (38.4%) | 652 | 299 | NI (33.7%) | 0.021 [2] |
HL60 | NI (12.7%) | 34 | NI (3.9%) | 10 | 591 | NI (0%) | NI (4.5%) | NI (16.6%) | NI (18.8%) | NI (0.3%) | 0.018 [2] |
Jack bean | 202 | 0.21 | 129 | 0.12 | 10 | NI (42%) | 115 | 98 | 26 | 241 | 0.0016 [2] |
A. oryzae | — | — | — | — | — | — | — | — | — | — | 0.33 [2] |
Human placenta | — | — | — | — | — | — | — | — | — | — | 0.012 [2] |
β-N-Acetylgalactosaminidase | |||||||||||
HL60 | NI (13.0%) | 9.5 | NI (1.4%) | 8.8 | 490 | NI (0.9%) | NI (10.1%) | NI (36.1%) | NI (15.9%) | NI (5.3%) | 0.049 [2] |
α-N-Acetylgalactosaminidase | |||||||||||
Chicken liver | NI (0%) | NI (3.3%) | NI (6.1%) | 65.3 | NI (1.4%) | NI (0%) | NI (0.5%) | NI (2.3%) | NI (2.3%) | NI (6.1%) | NI (9.0%) [2] |
Enzyme | IC50 (μM) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
A-11 | B-11 | C-11 | D-11 | E-11 | F-11a | E-11b | F-11b | G-11 | H-11 | |
α-Glucosidase | ||||||||||
Yeast | NIa (0%)b | NI (42.7%) | NI (9.55%) | NI (4.52%) | NI (9.55%) | NI (10.1%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) |
Rice | 286 | 725 | NI (0%) | NI (8.4%) | NI (15.7%) | NI (31.5%) | NI (12.9%) | NI (16.9%) | NI (11.8%) | NI (3.4%) |
Rat intestinal maltase | 68 | 251 | NI (37.1%) | NI (4.02%) | NI (9.95%) | NI (48.0%) | NI (10.9%) | NI (20.8%) | NI (%2.64) | NI (10.1%) |
β-Glucosidase | ||||||||||
Almond | NI (0%) | NI (44.4%) | NI (13.0%) | 419 | NI (12.4%) | NI (6.0%) | NI (4.8%) | NI (13.5%) | NI (2.3%) | NI (18.8%) |
Bovine liver | NI (0%) | NI (16.2%) | NI (0.7%) | NI (3.1%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (3.8%) |
α-Galactosidase | ||||||||||
Coffee beans | NI (0%) | NI (0%) | NI (1.9%) | NI (42.2%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) |
β-Galactosidase | ||||||||||
Bovine liver | NI (1.0%) | NI (36.3%) | NI (2.6%) | NI (6.5%) | NI (2.0%) | NI (0%) | NI (0%) | NI (2.6%) | NI (0%) | NI (4.2%) |
α-Mannosidase | ||||||||||
Jack bean | NI (0%) | NI (0%) | NI (0%) | 54 | NI (0.32%) | NI (0.97%) | NI (12.1%) | NI (0%) | NI (5.19%) | NI (3.81%) |
β-Mannosidase | ||||||||||
Snail | NI (0%) | NI (0%) | NI (3.35%) | NI (2.23%) | NI (2.6%) | NI (1.9%) | NI (0%) | NI (0%) | NI (0%) | NI (1.2%) |
α-l-Fucosidase | ||||||||||
Bovine kidney | NI (13.1%) | NI (0%) | NI (39.9%) | NI (8.0%) | NI (21.2%) | NI (46.4%) | NI (19.9%) | NI (16.2%) | NI (16.2%) | NI (16.2%) |
α,α-Trehalase | ||||||||||
Porcine kidney | NI (0%) | NI (4.7%) | NI (0.9%) | NI (0%) | NI (4.7%) | NI (0%) | NI (2.2%) | NI (0.6%) | NI (3.8%) | NI (0%) |
Amyloglucosidase | ||||||||||
A. niger | NI (0.9%) | 589 | NI (0%) | NI (0.7%) | NI (9.1%) | NI (0%) | NI (0%) | NI (0%) | NI (1.1%) | NI (2.1%) |
α-l-Rhamnosidase | ||||||||||
P. decumbens | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (1.6%) | NI (1.6%) | NI (1.3%) |
β-Glucuronidase | ||||||||||
E. coli | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) |
Bovine liver | NI (0.8%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (5.7%) | NI (4.1%) | NI (0%) | NI (0%) | NI (4.9%) |
β-N-Acetylhexosaminidase | ||||||||||
Bovine liver | NI (2.1%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) | NI (1.6%) | NI (1.6%) | NI (1.3%) |
HL60 | NI (0%) | NI (0%) | NI (0%) | NI (3.1%) | NI (1.3%) | NI (2.7%) | NI (0%) | NI (0%) | NI (0%) | NI (0%) |
Jack bean | NI (21.1%) | NI (14.5%) | NI (14.5%) | 99 | NI (19.3%) | NI (30.7%) | NI (23.5%) | 264 | NI (29.5%) | NI (7.2%) |
β-N-Acetylgalactosaminidase | ||||||||||
HL60 | NI (5.2%) | NI (3.8%) | NI (2.9%) | NI (14.8%) | NI (4.8%) | NI (6.0%) | NI (11.9%) | NI (8.1%) | NI (1.9%) | NI (0%) |
α-N-Acetylgalactosaminidase | ||||||||||
Chicken liver | NI (4.7%) | NI (7.5%) | NI (0.5%) | 44 | NI (0%) | NI (5.1%) | NI (0%) | NI (0%) | NI (13.6%) | NI (2.8%) |
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Yan, X.; Shimadate, Y.; Kato, A.; Li, Y.-X.; Jia, Y.-M.; Fleet, G.W.J.; Yu, C.-Y. Synthesis of Pyrrolidine Monocyclic Analogues of Pochonicine and Its Stereoisomers: Pursuit of Simplified Structures and Potent β-N-Acetylhexosaminidase Inhibition. Molecules 2020, 25, 1498. https://doi.org/10.3390/molecules25071498
Yan X, Shimadate Y, Kato A, Li Y-X, Jia Y-M, Fleet GWJ, Yu C-Y. Synthesis of Pyrrolidine Monocyclic Analogues of Pochonicine and Its Stereoisomers: Pursuit of Simplified Structures and Potent β-N-Acetylhexosaminidase Inhibition. Molecules. 2020; 25(7):1498. https://doi.org/10.3390/molecules25071498
Chicago/Turabian StyleYan, Xin, Yuna Shimadate, Atsushi Kato, Yi-Xian Li, Yue-Mei Jia, George W. J. Fleet, and Chu-Yi Yu. 2020. "Synthesis of Pyrrolidine Monocyclic Analogues of Pochonicine and Its Stereoisomers: Pursuit of Simplified Structures and Potent β-N-Acetylhexosaminidase Inhibition" Molecules 25, no. 7: 1498. https://doi.org/10.3390/molecules25071498
APA StyleYan, X., Shimadate, Y., Kato, A., Li, Y. -X., Jia, Y. -M., Fleet, G. W. J., & Yu, C. -Y. (2020). Synthesis of Pyrrolidine Monocyclic Analogues of Pochonicine and Its Stereoisomers: Pursuit of Simplified Structures and Potent β-N-Acetylhexosaminidase Inhibition. Molecules, 25(7), 1498. https://doi.org/10.3390/molecules25071498