3. Experimental Section
Commercially available reactants and solvents were obtained from commercial suppliers and were used without additional purification. The progress of the reaction was monitored using thin-layer chromatography (TLC, Kenilworth, NJ, USA) with Merck TLC Silica gel 60 F254. The melting points were measured using a Microquímica MQAPF-302 apparatus. 1H and 13C NMR spectra were acquired on an Avance III HD Bruker spectrometer (Bruker Corporation, Fällanden, Switzerland). Chemical shifts (δ) were expressed in parts per million (ppm) relative to CDCl3 or DMDO-d6, which were used as the solvent, and to TMS, as an internal standard. High-resolution mass spectra (HRMS) for 9n and 9o were obtained on an LTQ Orbitrap Discovery mass spectrometer (Thermo Fisher Scientific, Bremer, Germany). This system combines an LTQ XL linear ion-trap mass spectrometer and an Orbitrap mass analyzer. The analyses were performed through the direct infusion of the sample in positive-ion mode using electrospray ionization (ESI). For the elemental composition, the calculations used the specific tool included in the Qual Browser module of Xcalibur (Thermo Fisher Scientific, release 2.0.7) software. Compound purity was measured using an Dionex ultimate 3000 HPLC system (Thermo Fisher Scientific Inc., Waltham, MA, USA) equipped with a dual pump, automatic injector, and UV detector. For data acquisition, processing, and elementary composition, calculations were performed using the Chromeleon 6.80 SR11 software (Build 3160). The HPLC conditions: RP column, 5 μm Nucleodur C-18 (250 × 4.6 mm); flow rate, 1.5 mL/min; UV detection, 260 nm; 100% water (0.1% acetic acid) was maintained from 0 to 7 min, followed by a linear gradient from 100% water (0.1% acetic acid) to 90% acetonitrile/methanol (1:1, v/v) from 7 to 15 min (15–30 min) and subsequently returned to 100% water (0.1% acetic acid) in 5 min (30–35 min) and maintained for more 10 min (35–45 min). All the evaluated compounds were ≥90% pure.
General procedure for the synthesis of 4-(benzyloxy)benzonitriles (3a–3f).
To a round-bottom flask was added 4-cyanophenol (476 g, 4 mmol) in the presence of potassium carbonate (2.211 g, 16 mmol) using acetone (60 mL) as solvent. Then, benzyl bromide (0.680 g, 4 mmol) was added to the mixture. The reaction system was refluxed (56 °C) for 4 h. After returning to room temperature, the solvent was evaporated under reduced pressure. To the formed residue, 100 mL of distilled water was added and the solid obtained was filtered and washed with water (3 × 30 mL) [
19].
General procedure for the synthesis of 4-(benzyloxy)benzylamines (4a–f).
The reactions were carried out in a two-necked round-bottom flask under argon atmosphere. To a solution containing lithium aluminum hydride (0.398 g, 10.5 mmol) in THF (5 mL) at 0 °C was added dropwise a solution of 4-(benzyloxy)benzonitrile (0.732 g, 3.5 mmol) dissolved in THF (5 mL). After the addition, the temperature was gradually raised to 24 °C and the reaction mixture was stirred for 16 h. At the end of 16 h, the temperature was reduced again to 0 °C and distilled water (2 mL) was slowly added. Then, a 15% NaOH solution (
w/
v; 1 mL) and a new portion of distilled water (2 mL) were added. The mixture formed was then stirred for 12 h and then filtered through Celite. The solvent was evaporated under reduced pressure and the product was purified on silica gel column chromatography (chloroform:methanol 95:5 to 70:30) [
19].
General procedure for the synthesis of 2-alkyl-4-hydroxyquinolines (7a–e).
The synthesis of 2-alkyl-4-hydroxyquinolines was carried out using the reaction between substituted anilines (25 mmol) and
β-ketoesters (29.4 mmol) in the presence of magnesium sulfate (3.611 g, 30 mmol) and acetic acid (0.429 mL, 7.5 mmol) using ethanol (30 mL) as solvent. The mixture was heated under stirring at 80 °C for 16 h. Afterwards, the magnesium sulfate was filtered off and the ethanol was evaporated under reduced pressure yielding the corresponding intermediate
β-acrilate. Thermal cyclization of the intermediary was carried out by heating in Dowtherm
® A (30 mL) at a temperature of 230–250 °C for 15 min. Then, the residue formed was washed with hexane (100 mL). Finally, the solid formed was washed with chloroform (100 mL) and then dried under reduced pressure [
10].
General procedure for the synthesis of 2-alkyl-4-chloroquinolines (8a–e).
To a flask under argon atmosphere containing the 2-alkyl-4-hydroxyquinoline (1 mmol) dissolved in dry toluene (10 mL) was added phosphorus (V) oxychloride (POCl
3) (0.233 mL, 2.5 mmol) also dissolved in dry toluene. The reaction was kept at 110 °C under stirring for 2 h. After cooling, excess POCl
3 and solvent were removed under reduced pressure. Finally, the reaction mixture was neutralized with saturated sodium bicarbonate (60 mL). The product was extracted with ethyl acetate (3 × 30 mL), the organic phase was dried over magnesium sulfate, filtered, and concentrated under reduced pressure. The solvent was evaporated on reduced pressure and the product was purified on silica gel column chromatography (hexane:ethyl acetate 90:10) [
14].
General procedure for the synthesis of N-(4-benzyloxy)-4-aminoquinolines (9a–aa).
In a Schlenk tube were added 2-alkyl-4-chloroquinoline (1.0 mmol)
N,
N-diisopropylethylamine (DIPEA) (0.400 g, 2.3 mmol), dimethylsulfoxide (4 mL), and 4-(benzyloxy)benzylamine of interest (1.4 mmol). The reaction was heated at a temperature of 150 °C for 20 h. After cooling, the product was extracted with ethyl acetate (3 × 30 mL). The organic phase was washed with water (3 × 50 mL), dried over magnesium sulfate and the solvent evaporated under reduced pressure. The product was purified on silica gel column chromatography (hexane:ethyl acetate—70:30 to 0:100). For some substituents, the polarity of the eluent used was changed (ethyl acetate:methanol—100:0 to 70:30) [
20].
N-(4-(benzyloxy)benzyl)-2-methylquinolin-4-amine (9a): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 30/70), pale yellow solid, 32% yield, m.p. = 134–136 °C, HPLC: 94%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.91 (s, 3H), 2.39 (s, 3H), 4.48 (d, J = 5.6 Hz, 2H), 5.07 (s, 2H), 6.32 (s, 1H), 6.95–7.01 (m, 2H), 7.31–7.45 (m, 8H), 7.55–7.62 (m, 1H), 7.71 (dd, J = 8.4, 1.3 Hz, 1H), 7.84 (t, J = 6.1 Hz, 1H), 8.24 (dd, J = 8.5, 1.4 Hz, 1H). 13C NMR (101 MHz, DMSO) δ ppm: 21.66, 45.46, 69.65, 99.19, 115.21 (2C), 117.94, 121.97, 123.82, 128.11 (2C), 128.18, 128.25, 128.68 (2C), 128.87 (2C), 129.45, 131.39, 137.61, 147.82, 150.69, 157.82, 158.62.
N-(4-((4-chlorobenzyl)oxy)benzyl)-2-methylquinolin-4-amine (9b): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 30/70), pale yellow solid, 29% yield, m.p. = 111–113 °C, HPLC: 91%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.38 (s, 3H), 4.47 (d, J = 5.9 Hz, 2H), 5.06 (s, 2H), 6.28 (s, 1H), 6.94–7.01 (m, 2H), 7.31–7.39 (m, 3H), 7.42–7.48 (m, 4H), 7.57 (t, J = 7.6 Hz, 1H), 7.67–7.74 (m, 2H), 8.22 (d, J = 8.3 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.70, 45.43, 68.80, 99.20, 115.22 (2C), 118.06, 121.87, 123.62, 128.67 (2C),128.78, 128.87 (2C), 129.15, 129.90 (2C), 131.69, 132.82,136.68, 148.50, 150.34, 157.59, 158.91.
N-(4-((4-fluorobenzyl)oxy)benzyl)-2-methylquinolin-4-amine (9c): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 31% yield, m.p. = 134–136 °C, HPLC: 98%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.37 (s, 3H), 4.47 (d, J = 5.9 Hz, 2H), 5.04 (s, 2H), 6.28 (s, 1H), 6.92–7.02 (m, 2H), 7.15–7.26 (m, 2H), 7.30–7.34 (m, 2H), 7.34–7.41 (m, 1H), 7.43–7.52 (m, 2H), 7.52–7.61 (m, 1H), 7.66–7.75 (m, 2H), 8.21 (dd, J = 8.3, 1.4 Hz, 1H); 13C NMR (101 MHz, DMSO-d6) δ ppm: 25.13, 44.86, 68.36, 98.63, 114.64, 115.11 (d, J = 21.3 Hz), 117.49, 121.29, 123.04, 128.08, 128.20, 128.57, 129.78 (d, J = 8.3 Hz), 131.05, 133.27 (d, J = 3.0 Hz), 147.92, 149.76, 157.11, 158.33, 161.63 (d, J = 243.5 Hz).
N-(4-((3,4-difluorobenzyl)oxy)benzyl)-2-methylquinolin-4-amine (9d): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 30% yield, m.p. = 199–201 °C, HPLC: 99%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.61 (s, 3H), 4.69 (d, J = 5.5 Hz, 2H), 5.08 (s, 2H), 6.69 (s, 1H), 7.00 (d, J = 8.1 Hz, 2H), 7.24–7.30 (m, 1H), 7.38–7.47 (m, 4H), 7.59–7.66 (m, 1H), 7.88 (t, J = 7.2 Hz, 1H), 8.02 (d, J = 8.1 Hz, 1H), 8.66 (d, J = 8.3 Hz, 1H), 9.64–9.85 (m, 1H); 13C NMR (101 MHz, DMSO-d6) δ ppm: 20.40, 45.95, 68.70, 99.04, 115.67 (2C), 116.47, 117.00 (d, J = 17.5 Hz), 117.91 (d, J = 17.2 Hz), 120.29, 123.71, 124.71, 124.75, 124.78, 124.81, 126.42, 129.26 (2C), 129.95, 133.42, 135.48 (dd, J = 5.8, 3.7 Hz), 138.77, 148.49 (dd, J = 41.7, 12.5 Hz), 150.93 (dd, J = 41.8, 12.5 Hz), 154.49, 155.48, 158.04.
N-(4-((4-isopropylbenzyl)oxy)benzyl)-2-methylquinolin-4-amine (9e): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 29% yield, m.p. = 95–97 °C, HPLC: 94%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.18 (s, 3H), 1.20 (s, 3H), 2.38 (s, 3H), 2.88 (p, J = 6.9 Hz, 1H), 4.47 (d, J = 5.9 Hz, 2H), 5.01 (s, 2H), 6.28 (s, 1H), 6.94–7.00 (m, 2H), 7.22–7.26 (m, 2H), 7.30–7.39 (m, 5H), 7.53–7.60 (m, 1H), 7.66–7.73 (m, 2H), 8.22 (d, J = 7.9 Hz, 1H); 13C NMR (101 MHz, DMSO-d6) δ ppm: 24.33, 25.72, 33.65, 45.45, 69.54, 99.19, 115.15 (2C), 118.07, 121.87, 123.60, 126.77 (2C), 128.30 (2C), 128.64 (2C), 128.80, 129.13, 131.45, 134.98, 148.49, 148.53, 150.33, 157.85, 158.92.
N-(4-((3,5-dimethoxybenzyl)oxy)benzyl)-2-methylquinolin-4-amine (9f): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 26% yield, m.p. = 134–136 °C, HPLC: 92%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.40 (s, 3H), 3.75 (s, 6H), 4.48 (d, J = 5.8 Hz, 2H), 5.03 (s, 2H), 6.32 (s, 1H), 6.44 (t, J = 2.3 Hz, 1H), 6.63–6.57 (m, 2H), 6.92–7.02 (m, 2H), 7.40–7.29 (m, 3H), 7.45 (t, J = 6.0 Hz, 1H), 7.56 (ddd, J = 8.3, 6.8, 1.4 Hz, 1H), 7.71 (ddd, J = 8.4, 1.3, 0.5 Hz, 1H), 8.24–8.17 (dd, J = 8.5, J = 0.8 Hz 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.64, 45.79, 55.72 (2C), 69.89, 99.27, 100.16, 106.01 (2C), 115.47 (2C), 118.19, 121.82, 123.54, 128.73 (2C), 128.80, 129.02, 131.71, 140.15, 148.59, 150.48, 157.93, 158.89, 161.17 (2C).
N-(4-(benzyloxy)benzyl)-6-chloro-2-methylquinolin-4-amine (9g): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 30/70), pale yellow solid, 23% yield, m.p. = 165–167 °C, HPLC: 96%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.39 (s, 3H), 4.45 (d, J = 5.8 Hz, 2H), 5.07 (s, 2H), 6.35 (s, 1H) 6.93–7.02 (m, 2H), 7.29–7.46 (m, 7H), 7.57 (dd, J = 8.9, 2.3 Hz, 1H), 7.70 (d, J = 8.9 Hz, 1H), 7.80 (t, J = 5.9 Hz, 1H), 8.39 (d, J = 2.3 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 24.99, 44.97, 69.09, 99.29, 114.65 (2C), 118.31 120.78, 127.53 (2C), 127.64, 127.68, 128.30 (4C), 129.03, 130.15, 130.60, 137.04, 146.34, 149.27, 157.30, 158.97.
N-(4-((4-chlorobenzyl)oxy)benzyl) 6-chloro-2-methylquinolin-4-amine (9h): Flash colu-mn chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 31% yield, m.p. = 177–179 °C, HPLC: 91%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.39 (s, 2H), 4.45 (d, J = 5.8 Hz, 2H), 5.08 (s, 2H), 6.35 (s, 1H), 7.02–6.92 (m, 2H), 7.29–7.36 (m, 2H), 7.42–7.48 (m, 4H), 7.56 (dd, J = 8.9, 2.3 Hz, 1H), 7.70 (d, J = 9.0 Hz, 2H), 8.37 (d, J = 2.4 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.60, 45.52, 68.82, 99.86, 115.25 (2C), 118.88, 121.32, 128.09, 128.18, 128.87 (4C), 129.55, 129.88 (2C), 130.79, 131.35, 132.82, 136.68, 146.99, 149.79, 157.66, 159.57.
N-(4-((4-fluorobenzyl)oxy)benzyl) 6-chloro-2-methylquinolin-4-amine (9i): Flash colu-mn chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale solid, 39% yield, m.p. = 170–172 °C, HPLC: 99%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.40 (s, 3H), 4.46 (d, J = 5.9 Hz, 2H), 5.07 (s, 2H), 6.36 (s, 1H), 7.03–6.95 (m, 2H), 7.23–7.13 (m, 2H), 7.38–7.29 (m, 2H), 7.52–7.43 (m, 2H), 7.59–7.52 (m, 2H), 7.71 (d, J = 8.9 Hz, 1H), 8.36 (d, J = 2.3 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.63, 45.81, 69.28, 99.93, 115.48 (3C), 115.70, 119.04, 121.27, 128.21, 128.90 (2C), 129.39, 130.14 (d, J = 8.3 Hz, 2C), 130.93, 131.48, 133.95 (d, J = 3.0 Hz, 1H), 147.25, 149.85, 157.93, 159.64, 162.26 (d, J = 243.8 Hz, 1H).
N-(4-((3,4-difluorobenzyl)oxy)benzyl)-6-chloro-2-methylquinolin-4-amine (9j) Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, yield 46%, m.p. = 137–139 °C, HPLC: 96%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.38 (s, 3H), 4.45 (d, J = 5.8 Hz, 2H), 5.06 (s, 2H), 6.34 (s, 1H), 6.97–7.00 (m, 2H), 7.31–7.35 (m, 2H), 7.39–7.58 (m, 4H), 7.70 (d, J = 8.9 Hz, 1H), 7.79 (t, J = 5.9 Hz, 1H), 8.38 (d, J = 2.3 Hz, 1H); 13C NMR (101 MHz, DMSO-d6) δ ppm: 25.61, 45.49, 68.33, 99.86, 115.23 (2C), 117.07, 117.15 (d, J = 17.3 Hz),117.24, 117.87, 117.96 (d, J = 17.2 Hz), 118.04, 118.89, 121.31, 124.88, 124.91, 124.93 (dd, J = 6.7, 3.5 Hz), 124.94, 124.98, 128.17, 128.87 (2C), 129.54, 130.83, 131.45, 135.43 (dd, J = 5.7, 3.6 Hz), 147.03, 148.39 (dd, J = 39.6, 12.5 Hz), 149.75, 150.83 (dd, J = 39.7, 12.5 Hz), 157.53, 159.59.
N-(4-((4-isopropylbenzyl) oxy)benzyl)-6-chloro-2-methylquinolin-4-amine (9k): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, yield 33%, m.p. = 126–128 °C, HPLC: 91%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.19 (d, J = 6.9 Hz, 8H), 2.38 (s, 2H), 2.88 (p, J = 6.8 Hz, 1H), 4.45 (d, J = 5.8 Hz, 2H), 5.02 (s, 2H), 6.35 (s, 1H), 6.95–6.98 (m, 2H), 7.23–7.26 (m, 2H), 7.31–7.36 (m, 4H), 7.57 (dd, J = 8.9, 2.3 Hz, 1H), 7.70 (d, J = 8.9 Hz, 1H), 7.79 (t, J = 5.8 Hz, 1H), 8.38 (d, J = 2.3 Hz, 1H); 13C NMR (101 MHz, DMSO-d6) δ ppm: 23.76, 25.00, 33.08, 44.97, 68.98, 99.29, 114.61 (2C), 118.31, 120.78, 126.20 (2C), 127.72 (2C), 128.29 (2C), 128.57, 129.02, 130.16, 130.51, 134.40, 146.35, 149.27, 157.36, 158.97.
N-(4-((3,5-dimethoxybenzyl)oxy)benzyl)-6-chloro-2-methylquinolin-4-amine (9l): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 33% yield, m.p. = 147–149 °C, HPLC: 96%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 3.74 (d, J = 3.3 Hz, 6H), 4.44 (d, J = 5.7 Hz, 2H), 5.01 (s, 2H), 6.34 (s, 1H), 6.44 (t, J = 2.3 Hz, 1H), 6.59 (d, J = 2.3 Hz, 3H), 6.91–7.01 (m, 3H), 7.29–7.35 (m, 2H), 7.56 (dd, J = 8.9, 2.2 Hz, 1H), 7.70 (d, J = 8.9 Hz, 1H), 7.76 (t, J = 5.9 Hz, 1H), 8.38 (d, J = 2.3 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.66, 45.53, 55.63 (2C), 69.53, 99.83, 99.86, 105.82 (2C), 115.23 (2C), 118.91, 121.32, 128.14, 128.84 (2C), 129.13, 130.90, 131.22, 140.01, 147.11, 149.73, 157.77, 159.63, 161.00 (2C).
N-(4-(benzyloxy)benzyl)-6-bromo-2-methylquinolin-4-amine (9m): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 30/70), pale yellow solid, 48% yield, m.p. = 164–166 °C, HPLC: 98%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.38 (s, 3H), 4.45 (d, J = 5.8 Hz, 2H), 5.07 (s, 2H), 6.34 (s, 1H), 6.93–7.02 (m, 2H), 7.31–7.45 (m, 7H), 7.79 (t, J = 5.9 Hz, 1H), 8.53 (d, J = 2.1 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.71, 45.54, 69.66, 99.87, 115.21 (2C), 116.44, 119.53, 124.48, 128.10 (2C), 128.24, 128,87 (4C), 131.07, 131.19, 132.09, 137.61, 147.32, 149.64, 157.87, 159.75.
N-(4-((4-chlorobenzyl)oxy)benzyl)-6-bromo-2-methylquinolin-4-amine (9n): Flash colu-mn chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 44% yield, m.p. = 184–186 °C, HPLC: 92%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.39 (s, 3H), 4.43 (d, J = 5.7 Hz, 2H), 5.07 (s, 2H), 6.34 (s, 1H), 6.93–7.02 (m, 2H), 7.30–7.36 (m, 2H), 7.41–7.47 (m, 4H), 7.58 (t, J = 5.9 Hz, 1H), 7.61 –7.70 (m, 2H), δ 8.47 (d, J = 2.0 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.64, 45.80, 69.17, 99.93, 115.49 (2C), 116.40, 119.63, 124.44 128.83 (2C), 128.93 (2C), 129.75 (2C), 131.07, 131.54, 132.01, 132.88, 136.80, 147.41, 149.77, 157.85, 159.73, HRMS (ESI): m/z calc. for C24H21BrClN2O [M + H]+: 467.0520; obt.: 467.0509.
N-(4-((4-fluorobenzyl)oxy)benzyl) 6-bromo-2-methylquinolin-4-amine (9o): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale solid, 35% yield, m.p. = 173–175 °C, HPLC: 98%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.40 (s, 3H), 4.46 (s, 2H), 5.07 (d, J = 0.9 Hz, 2H), 6.36 (s, 1H), 6.95–7.03 (m, 2H), 7.13–7.23 (m, 2H), 7.29–7.37 (m, 2H), 7.43–7.53 (m, 2H), 7.58 (t, J = 5.9 Hz, 1H), 7.65 (dd, J = 3.0, 1.3 Hz, 2H), 8.50 (dd, J = 1.9, 0.7 Hz, 1H); 13C NMR (101 MHz, DMSO-d6) δ ppm: 25.66, 45.81, 69.28, 99.94, 115.48 (3C), 115.70, 116.39, 119.64, 124.44, 128.91 (2C), 130.14 (d, J = 8.2 Hz,2C), 131.10, 131.47, 132.00, 133.95 (d, J = 3.0 Hz), 147.44, 149.75, 157.93, 159.75, 162.26 (d, J = 243.8 Hz), HRMS (ESI): m/z calc. for C24H21BrFN2O [M + H]+: 451.0816; obt.: 451.0790.
N-(4-((3,4-difluorobenzyl)oxy)benzyl) 6-bromo-2-methylquinolin-4-amine (9p): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 46% yield, m.p. = 142–144 °C, HPLC: 97%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.37 (s, 3H), 4.45 (d, J = 5.7 Hz, 2H), 5.06 (s, 2H), 6.34 (s, 1H), 6.92–7.04 (m, 2H), 7.23–7.37 (m, 3H), 7.37–7.55 (m, 2H), 7.59–7.73 (m, 2H), 7.81 (t, J = 5.9 Hz, 1H), 8.52 (d, J = 2.1 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.63, 45.48, 68.33, 99.86, 115.23 (2C), 116.46, 117.96 (d, J = 17.1 Hz), 117.16 (d, J = 17.4 Hz), 119.48, 124.47, 124.98, 128.88 (2C), 130.98, 131.44, 132.14, 135.43 (dd, J = 5.7, 3.8 Hz), 148.39 (dd, J = 39.4, 12.5 Hz), 149.66, 151.03 (d, J = 12.6 Hz), 157.53, 159.69.
N-(4-((4-isopropylbenzyl)oxy)benzyl) 6-bromo-2-methylquinolin-4-amine (9q): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, m.p. = 135–137 °C, 27% yield, HPLC: 97%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.18 (s, 3H), 1.20 (s, 3H), 2.37 (s, 3H), 2.87 (hept, J = 6.9 Hz, 1H), 4.44 (d, J = 5.8 Hz, 2H), 5.01 (s, 2H), 6.34 (s, 1H), 6.94–6.99 (m, 2H), 7.22–7.26 (m, 2H), 7.30–7.37 (m, 4H), 7.61–7.70 (m, 2H), 7.79 (t, J = 5.9 Hz, 1H), 8.53 (d, J = 2.1 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 24.33 (2C), 25.69, 45.52, 69.52, 99.86, 115.15 (2C), 116.43,119.51, 124.48, 126.77 (2C), 128.29 (2C), 128.85 (2C), 129.13 (2C), 131.06, 131.09, 132.10, 134.96, 147.29, 148.49, 149.64, 157.91, 159.73.
N-(4-((3,5-dimethoxybenzyl)oxy)benzyl)-6-bromo-2-methylquinolin-4-amine (9r): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, m.p. = 151–153 °C, 36% yield, HPLC: 94%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.38 (s, 3H), 3.73 (s, 6H), 4.45 (d, J = 5.7 Hz, 2H), 5.01 (s, 2H), 6.35 (s, 1H), 6.44 (t, J = 2.3 Hz, 1H), 6.58 (d, J = 2.3 Hz, 2H), 6.92–7.01 (m, 2H), 7.28–7.36 (m, 2H), 7.60–7.66 (m, 1H), 7.66–7.72 (m, 1H), 7.86 (t, J = 5.9 Hz, 1H), 8.53 (d, J = 2.2 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.46, 45.55, 55.64 (2C), 69.53, 99.83, 99.85, 105.82 (2C), 115.25 (2C), 116.54, 119.43, 124.53, 128.88 (2C), 130.69, 131.13, 132.27, 140.01, 146.88, 149.84, 157.79, 159.54, 161.00 (2C).
N-(4-(benzyloxy)benzyl)-6-bromo-2-ethylquinolin-4-amine (9s): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 44% yield, m.p. = 136–138 °C, HPLC: 93%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.17 (t, J = 7.6 Hz, 3H), 2.64 (q, J = 7.6 Hz, 2H), 4.45 (d, J = 5.7 Hz, 2H), 5.07 (s, 2H), 6.35 (s, 1H), 6.94–7.02 (m, 2H), 7.31–7.45 (m, 7H), 7.63–7.69 (m, 2H), 7.79 (t, J = 5.9 Hz, 1H), 8.52 (d, J = 1.9 Hz, 1H); 13C NMR (101 MHz, DMSO-d6) δ ppm: 14.05, 32.14, 45.58, 69.63, 98.98, 115.19 (2C), 116.45, 119.75, 124.47, 128.08 (2C), 128.23, 128.86 (2C), 128.96 (2C), 131.23, 131.26, 132.04, 137.61, 147.29, 149.73, 157.83, 164.61.
N-(4-((4-chlorobenzyl)oxy)benzyl)-6-bromo-2-ethylquinolin-4-amine (9t) Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 30% yield, m.p. = 122–124 °C, HPLC: 92%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.16 (t, J = 7.6 Hz, 3H), 2.64 (q, J = 7.6 Hz, 2H), 4.45 (d, J = 5.6 Hz, 2H), 5.07 (s, 2H), 6.34 (s, 1H), 6.93–7.01 (m, 2H), 7.30–7.36 (m, 2H), 7.40–7.49 (m, 4H), 7.61–7.71 (m, 2H), 7.79 (t, J = 5.9 Hz, 1H), 8.51 (d, J = 2.0 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 14.02, 32.13, 45.57, 68.79, 98.99, 115.24, 116.45, 119.74, 124.45 (2C), 128.86 (2C), 128.97 (2C), 129.86 (2C), 131.25, 131.40, 132.04, 132.80, 136.68, 147.28, 149.72, 157.62, 164.60.
N-(4-(benzyloxy)benzyl)-6-methoxy-2-methylquinolin-4-amine (9u): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 30/70), pale yellow solid, 32% yield, m.p. = 96–98 °C, HPLC: 98%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.35 (s, 3H), 3.89 (s, 3H), 4.48 (d, J = 5.8 Hz, 2H), 5.07 (s, 2H), 6.26 (s, 1H), 6.94–7.03 (m, 2H), 7.23 (dd, J = 9.0, 2.8 Hz, 1H), 7.55 (t, J = 5,9 Hz, 1H) 7.31–7.45 (m, 7H), 7.60 (s, 2H), 7.60–7.66 (m, 2H); 13C NMR (101 MHz, DMSO) δ ppm: 25.42, 45.54, 56.08, 69.66, 99.35, 101.37, 115.21 (2C), 118.41, 120.60, 128.11 (2C), 128.24, 128.68 (2C), 128.87 (2C), 130.22, 131.66, 137.63, 144.02, 149.63, 155.98, 156.35, 157.80.
N-(4-((4-chlorobenzyl)oxy)benzyl)-6-methoxy-2-methylquinolin-4-amine (9v): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 30/70), pale yellow solid, 27% yield, m.p. = 259–261 °C, HPLC: 90%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.57 (s, 3H), 3.96 (s, 3H), 4.67 (d, J = 5.9 Hz, 2H), 5.08 (s, 2H), 6.62 (s, 1H), 6.95–7.03 (m, 2H), 7.36–7.47 (m, 6H), 7.48–7.54 (m, 1H), 7.94 (d, J = 9.2 Hz, 1H), 8.11 (d, J = 2.7 Hz, 1H), 9.60 (t, J = 6.0 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 19.77, 45.34, 56.45, 68.66, 98.25, 103.37, 115.13 (2C), 117.14, 121.56, 123.84, 128.33 (2C), 128.68 (2C), 129.25 (2C), 129.53, 132.39, 133.44, 136.20, 151.90, 154.04, 157.44, 157.62.
N-(4-((4-fluorobenzyl)oxy)benzyl)-6-methoxy-2-methylquinolin-4-amine (9x): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 0/100), pale yellow solid, 28% yield, m.p. = 141–143 °C, HPLC: 97%; 1H NMR (400 MHz, DMSO-d6) δ ppm 2.36 (s, 3H), 3.89 (s, 3H), 4.49 (d, J = 5.8 Hz, 2H), 5.05 (s, 2H), 6.28 (s, 1H), 6.98 (d, J = 8.2 Hz, 2H), 7.18–7.26 (m, 3H), 7.33 (d, J = 8.1 Hz, 2H), 7.46–7.50 (m, 2H), 7.62–7.66 (m, 2H), 7.70 (t, J = 6.0 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 25.11, 45.53, 56.12, 68.94, 99.32, 101.48, 115.23, 115.67 (d, J = 21,8 Hz, 2C), 118.35, 120.84, 128.70 (2C), 129.72, 130.34 (d, J = 9,09 Hz, 2C), 131.63, 133.83 (d, J = 3,03 Hz), 143.40, 149.92, 156.09, 157.70, 162.20 (d, J = 244.4 Hz).
N-(4-((3,4-difluorobenzyl) oxy)benzyl)-6-methoxy-2-methylquinolin-4-amine (9y): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 0/100), pale yellow solid, m.p. = 104–106 °C, 46% yield, HPLC: 97%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.34 (s, 3H), 3.88 (s, 3H), 4.48 (d, J = 5.8 Hz, 2H), 5.06 (s, 2H), 6.25 (s, 1H), 6.96–7.01 (m, 2H), 7.22 (dd, J = 9.1, 2.7 Hz, 1H), 7.30–7.35 (m, 2H), 7.40–7.54 (m, 2H), 7.55–7.60 (m, 1H), 7.59–7.63 (m, 2H); 13C NMR (101 MHz, DMSO) δ ppm: 25.34, 45.49, 56.08, 68.34, 99.34, 101.35, 115.24 (2C), 117.57 (dd, J = 80.1, 17.1 Hz), 118.37, 120.65, 124.95 (dd, J = 6.7, 3.5 Hz, 1C), 128.69 (2C),130.11, 131.90, 135.46 (dd, J = 5.8, 3.7 Hz), 143.86, 124.95 (dd, J = 6.7, 3.5 Hz), 149.66, 150.83 (dd, J = 39.6, 12.5 Hz), 155.99, 156.27, 157.46.
N-(4-((4-isopropylbenzyl)oxy)benzyl)-6-methoxy-2-methylquinolin-4-amine (9w): Flash column chromatography on silica gel (hexanes/ethyl acetate, 90/10 to 0/100), pale yellow solid, m.p. = 133–135 °C, 33% yield, HPLC: 91%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.18 (d, J = 2.3 Hz, 3H), 1.20 (d, J = 2.4 Hz, 3H), 2.36 (s, 2H), 2.88 (p, J = 6.7 Hz, 1H), 3.89 (s, 3H), 4.48 (d, J = 5.8 Hz, 2H), 5.02 (s, 2H), 6.29 (s, 1H), 6.95–6.99 (m, 2H), 7.22–7.27 (m, 3H), 7.31–7.36 (m, 4H), 7.62–7.67 (m, 2H), 7.73 (t, J = 5.9 Hz, 1H); 13C NMR (101 MHz, DMSO) δ ppm: 24.33, 25.02, 33.54, 45.54, 56.13, 69.53, 99.29, 101.50, 115.17 (2C), 118.32, 120.92, 126.77 (2C), 128.30 (2C), 128.70 (2C), 129.53, 129.56, 131.40, 134.98, 143.19, 148.49, 150.01, 156.00, 156.11 157.87.
N-(4-((3,5-dimethoxybenzyl)oxy)benzyl)-6-methoxy-2-methylquinolin-4-amine (9z): Flash column chromatography on a silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 33% yield, m.p. = 164–166 °C, HPLC: 96%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 2.35 (s, 3H), 3.73 (s, 6H), 3.89 (s, 3H), 4.47 (d, J = 5.8 Hz, 2H), 5.01 (s, 2H), 6.25 (s, 1H), 6.41–6.49 (m, 1H), 6.59 (d, J = 2.3 Hz, 2H), 6.91–7.02 (m, 2H), 7.22 (dd, J = 9.1, 2.7 Hz, 1H), 7.29–7.36 (m, 2H), 7.55 (t, J = 5.7 Hz, 1H), 7.59–7.66 (m, 2H); 13C NMR (101 MHz, DMSO) δ ppm: 25.41, 45.54, 55.63 (2C), 56.07, 69.53, 99.34, 99.83, 101.35,105.83 (2C), 115.24 (2C), 118.40, 120.59, 128.66 (2C), 130.23, 131.68, 140.03, 144.02, 149.61, 155.96, 156.34,157.71, 161.00 (2C).
N-(4-(benzyloxy)benzyl)-2-ethyl-6-methoxyquinolin-4-amine (9aa): Flash column chromatography on a silica gel (hexanes/ethyl acetate, 90/10 to 50/50), pale yellow solid, 34% yield, m.p. = 118–120 °C, HPLC: 92%; 1H NMR (400 MHz, DMSO-d6) δ ppm: 1.16 (t, J = 7.6 Hz, 3H), 2.62 (q, J = 7.6 Hz, 2H), 3.89 (s, 3H), 4.48 (d, J = 5.8 Hz, 2H), 5.07 (s, 2H), 6.27 (s, 1H), 6.96 –7.00 (m, 2H), 7.23 (dd, J = 9.1, 2.7 Hz, 1H), 7.33 –7.44 (m, 7H), 7.56 (t, J = 5.9 Hz, 1H), 7.61 (d, J = 2.7 Hz, 1H), 7.65 (d, J = 9.1 Hz, 1H); 13C NMR (101 MHz, DMSO), δ ppm: 14.25, 31.89, 42.04, 45.61, 56.08, 69.64, 98.44, 101.35, 115.19 (2C), 118.65, 120.57, 128.08 (2C), 128.23, 128.78 (2C), 128.86 (2C), 130.37, 131.69, 137.63, 143.92, 149.72, 156.00, 157.77, 161.31, 161.36.
3.1. Minimum Inhibitory Concentration
The determination of the minimum inhibitory concentrations (MICs) for each synthesized compound was performed in 96-well microplates. Isoniazid was used as positive control and compound solutions were prepared at concentrations of 2 mg/mL in DMSO. They were diluted in Middlebrook 7H9 medium containing 10% ADC (albumin, dextrose, and catalase) to a concentration of 20 μg/mL of each compound containing 2% DMSO (Sigma-Aldrich, St. Louis, MO, USA). After, they were evaluated for the presence of crystals—if crystals were present, the mixture was diluted once more to half of the previous concentration. It is noteworthy that only molecules capable of forming a real solution were evaluated. Serial 2-fold dilutions of each drug in 100 μL of Middlebrook 7H9 medium containing 10% ADC (BD co.) were prepared directly in 96-well plates at concentration ranges starting with the maximum concentration allowed by the solubility of each compound. Growth controls without antibiotic and sterility controls without inoculation were included. The MIC was determined for M. tuberculosis H37Rv. Mycobacterial strains were grown in Middlebrook 7H9 containing 10% OADC (oleic acid, albumin, dextrose, and catalase) and 0.05% tween 80, and cells were vortexed with sterile glass beads (4 mm) for 5 min to disrupt clamps and then allowed to settle for 20 min. The supernatants were measured using a spectrophotometer at an absorbance of 600 nm. The Mtb suspensions were aliquoted and stored at −20 °C. Each suspension was appropriately diluted in Middlebrook 7H9 broth containing 10% ADC to achieve an optical density of 0.006 at 600 nm, and 100 μL was added to each well of the plate except to the sterility controls. The plates were covered, sealed, and incubated at 37 °C. After 7 days of incubation, 60 μL of 0.01% resazurin solution was added to each well, and the plate was incubated for an additional 48 h at 37 °C. In the MIC assay, a color change from blue to pink indicates bacterial growth, and the MIC was established as the lowest compound concentration prior to color change. Three tests were performed independently for each chemical structure and the MIC values were reported as the highest value from the three assays.
3.2. Cellular Viability Evaluation
Cellular viability was determined using two distinct methods—3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-2H-tetrazolium bromide (MTT) and neutral red uptake (NRU). The cell lines employed in the evaluation were Vero and HepG2 cells. Both cell lines were grown with Dulbecco’s Modified Eagle Medium (DMEM-Gibco, Grand Island, NY, USA) and supplemented with 10% fetal bovine serum by Invitrogen, 1% antibiotics (penicillin and streptomycin) by Gibco, and 0.1% fungizone by Gibco. For the MTT and NRU assays, Vero (2 × 103 cells/well) and HepG2 (4 × 103 cells/well) cells were seeded in 96-well culture plates and incubated overnight. The N-(4-(benzyloxy)benzyl)-4-aminoquinolines were diluted at concentrations of 3 µM using DMSO 1% and were incubated with the cell lines for 72 h at 37 °C. In the MTT investigation, after incubation for 72 h at 37 °C under 5% CO2, the cells were incubated with MTT solution (5 mg/mL, Sigma-Aldrich, St. Louis, MO, USA) for 4 h. The formazan crystals were solubilized in 100 µL of DMSO. An EZ Read 400 microplate reader (Biochrom, Cambridge, UK) was used to measure the absorbance at 570 nm. The mean absorbance of negative control wells was established as the maximum viability and the values of treated cells were calculated as the percentage of vehicle control (1% DMSO). The precipitated purple formazan crystals were directly equivalent to the number of live cells with active mitochondrial metabolism. In the NRU investigation, after 72 h of cell incubation, PBS was used to wash the cells and 200 µL of neutral red dye solution (25 µg/mL, Sigma-Aldrich, St. Louis, MO, USA) prepared in serum-free medium was added to the plate and incubated for 3 h at 37 °C under 5% CO2. Cells were washed with PBS followed by the addition of 100 µL of desorb solution (ethanol/acetic acid/water, 50:1:49) for 30 min with smooth homogenization to extract neutral red dye from the viable cells. An EZ Read 400 microplate reader was operated to measure the absorbance at 562 nm, and the cell viability was attributed as a percentage, considering the vehicle control cell (1% DMSO) as maximum cell viability.
3.3. Chemical Stability
The experiment was carried out by the Center for Applied Mass Spectrometry (CEMSA), São Paulo, Brazil. In brief, the test compounds (10 µM) were incubated at 37 °C for 24 h in the presence of pH-controlled buffer solution at pH 1.2 (simulating the pH of the stomach—0.1 M HCl), pH 7.4 (simulating plasma pH—phosphate buffer) and pH 9.1 (simulating intestinal pH—0.1 M NH4HCO3). Afterward, compounds were quantified by HPLC–MS/MS. Alprenolol drug was used as an analytical control (data not shown). The results were presented as the percentage, comparing the signal at time zero of the assay (100%) with the signal produced by concentrations after the incubation period.
3.4. Permeability
The experiment was carried out by the Center for Applied Mass Spectrometry (CEMSA), São Paulo, Brazil. In brief, the Parallel Artificial Membrane Permeability Assay (PAMPA) assay consists of quantifying the test compound (via HPLC–MS/MS) after an incubation period, in two solutions separated by an artificial lipid membrane. The result of this test is expressed in units of diffusion rate (permeation). The procedure comprised the following steps: (1) preparing the membrane, which contains lipids, with specific activating solutions, creating a hydrophobic surface that simulates the intestinal epithelial cell; (2) adding the test compound at a concentration of 10 µM to the donor aqueous phase (buffered pH 7.4); (3) after 5 h at room temperature, an aliquot of the solution receptor (buffered at pH 7.4) is removed, in which the compound is transported by passive diffusion, for quantification by HPLC–MS/MS.
3.5. Metabolic Stability
The experiment was carried out by the Center for Applied Mass Spectrometry (CEMSA), São Paulo, Brazil. In brief, the metabolic stability assay was performed in the presence of rat liver microsomes. Compounds were incubated at 37 °C in a buffered solution containing 1 mg/mL of microsomal protein and nicotinamide adenine dinucleotide (NADH). The reaction was stopped at different times using acetonitrile. The compound concentration was determined by HPLC–MS/MS at each incubation time (0, 5, 15, and 30 min) and the percentage remaining versus time curve was determined. Verapamil was used as an analytical control (data not shown).