Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
Abstract
:1. Introduction
2. Results and Discussion
2.1. Microsatellite Variation
2.2. Flanking Region Analysis
2.3. Evolutionary Mechanism of Microsatellite Loci
2.4. Are A. japonica and A. anguilla a Sister Group?
3. Experimental Section
3.1. Sampling
3.2. Microsatellite Cloning and Sequencing
3.3. Data Analysis
4. Conclusions
Acknowledgments
References
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Locus Species | Ta | No. of Sequences | Repeat Regions |
---|---|---|---|
AJ-1 | |||
A. japonica | 58 | 11 | (TG)7~13 |
A. marmorata | 54 | 17 | (TG)6, 7, 8, 10; TC(TG)6 |
A. anguilla | 54 | 10 | (TG)5~10 |
A. bicolor pacifica | 54 | 11 | (TG)7~9 |
AJ-8 | |||
A. japonica | 56 | 12 | (TG)14~18, 20 |
A. marmorata | 52 | 2 | (TG)14, 15 |
A. anguilla | 52 | 11 | (TG)12, 13, 15, 17, 19; (TG)6(TA)(TG)11 |
A. bicolor pacifica | 52 | 3 | (TG)13, 22 |
AJ-9 | |||
A. japonica | 54 | 11 | (TG)8, 9, 11, 12, 14, 15; (TG)8AG(TG)10 |
A. marmorata | 56 | 9 | (TG)14, 15, 17, 18, 19, 23, 27 |
A. anguilla | 54 | 12 | (TG)12; (TG)10, 19, 21AG(TG)4 |
(TG)3CG(GT)10,11 | |||
(TG)7CG(TG)4AG(TG)6 | |||
A. bicolor pacifica | 54 | 8 | (TG)9, 10, 13, 14(AG)1, 2(TG)9~12 |
(TG)5TA(TG)3AG(TG)11 | |||
AJMS-3 | |||
A. japonica | 56 | 12 | (TG)7~10 |
A. marmorata | 56 | 9 | (TG)7, 9, 10 |
A. anguilla | 54 | 8 | (TG)7, 10, 11; (TG)3, 8CG(TG)1, 4 |
A. bicolor pacifica | 54 | 8 | (TG)7, 8, 10 |
AJMS-6 | |||
A. japonica | 56 | 18 | (TG)9, 12~16, 18 |
A. marmorata | 54 | 12 | (TG)12, 13, 14, 16, 18, 19 |
A. anguilla | 54 | 14 | (TG)7, 10, 13, 14, 15 |
A. bicolor pacifica | 54 | 16 | (TG)12~18TA(TG)0, 2 |
AJMS-10 | |||
A. japonica | 58 | 12 | (GA)10, 12, 14~16, 18~22, 35, 36, 39 |
A. marmorata | 54 | 14 | (GA)8~12, 14, 15, 17 |
A. anguilla | 54 | 15 | (GA)22 |
(GA)9, 12, 13, 15, 16, 17GG(GA)6, 9, 10, 11,12 | |||
A. bicolor pacifica | 54 | 19 | (GA)13~15,17,19, 20, 22, 23, 26 |
(GA)6, 7GG(GA)5, 12 | |||
(GA)7CA(GA)12, 13; (GA)9AT(GA)9 |
A. japonica | A. marmorata | A. bicolor pacifica | A. anguilla | |
---|---|---|---|---|
A. japonica | --- | 0.050 ± 0.11 | 0.055 ± 0.011 | 0.053 ± 0.011 |
A. marmorata | 22 | --- | 0.044 ± 0.010 | 0.061 ± 0.012 |
A. bicolor pacifica | 24 | 20 | --- | 0.057 ± 0.011 |
A. anguilla | 23 | 27 | 25 | --- |
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Tseng, M.-C. Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels. Int. J. Mol. Sci. 2012, 13, 4281-4294. https://doi.org/10.3390/ijms13044281
Tseng M-C. Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels. International Journal of Molecular Sciences. 2012; 13(4):4281-4294. https://doi.org/10.3390/ijms13044281
Chicago/Turabian StyleTseng, Mei-Chen. 2012. "Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels" International Journal of Molecular Sciences 13, no. 4: 4281-4294. https://doi.org/10.3390/ijms13044281