Detection of Mycoplasma Contamination in Transplanted Retinal Cells by Rapid and Sensitive Polymerase Chain Reaction Test
Abstract
:1. Introduction
2. Results
2.1. PCR Sensitivity in the Mycoplasma PCR Test
2.2. Specificity of the Mycoplasma PCR Test
2.3. Representative Data of Mycoplasma-Positive Cells in Laboratory Cultures
2.4. Detection of Mycoplasma by SEM
3. Discussion
4. Materials and Methods
4.1. Cells and DNA Extraction
4.2. Mycoplasma Strains
4.3. CFU and GC Measurements
4.4. PCR
4.5. Scanning Electron Microscope
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Acknowledgments
Conflicts of Interest
Abbreviations
CFU | colony-forming unit |
Cp | crossing point |
GC | genomic copy |
iPSC | induced pluripotent stem cells |
PCR | polymerase chain reaction |
qPCR | quantitative real-time PCR |
RPE | retinal pigment epithelium |
rDNA | ribosomal DNA |
SEM | scanning electron microscope |
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Mollicutes Species | Strains | CFU/mL | GC/mL * | GC/CFU Ratios |
---|---|---|---|---|
Mycoplasma arginini | ATCC 23838 | 5 × 108 | 1.36 × 109 | 2.72 |
Mycoplasma hyorhinis | NBRC 14858 | 8.83 × 108 | 1.9 × 109 | 2.15 |
Mycoplasma pneumoniae | NBRC 14401 | 5.1 × 107 | 1.56 × 109 | 30.59 |
Acholeplasma laidlawii | NBRC 14400 | 1.07 × 108 | 1.06 × 109 | 9.91 |
Mycoplasma fermentans | NBRC 14854 | 1.04 × 109 | 3.76 × 109 | 3.62 |
Mycoplasma salivarium | NBRC 14478 | 1.41 × 109 | 2.1 × 109 | 1.49 |
Mycoplasma orale | NBRC 14477 | 6.37 × 108 | 2.32 × 109 | 3.64 |
Mycoplasma hominis | NBRC 14850 | 4 × 107 | 1.76 × 109 | 4.55 |
Ureaplasma urealyticum | ATCC 27618 | 2.03 × 108 | 7.2 × 108 | 3.54 |
A. laidlawii | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 * | 100 |
10 | 4/4 | 100 |
1 | 1/4 | 25 |
M. arginini | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 4/4 | 100 |
1 | 2/4 | 50 |
M. hyorhinis | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 4/4 | 100 |
1 | 0/4 | 0 |
M. pneumoniae | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 4/4 | 100 |
1 | 3/4 | 75 |
M. orale | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 4/4 | 100 |
1 | 3/4 | 75 |
M. fermentans | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 4/4 | 100 |
1 | 3/4 | 75 |
M. salivarium | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 4/4 | 100 |
1 | 1/4 | 25 |
M. hominis | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 4/4 | 100 |
1 | 4/4 | 100 |
U. urealyticum | ||
Spike (CFU/mL) | Run | Positive rate (%) |
100 | 4/4 | 100 |
10 | 1/4 | 25 |
1 | 0/4 | 0 |
Strains | Clone No. | Number of Copies (Copies/mL) | PCR Results |
---|---|---|---|
Gram-positive strains | |||
Staphylococcus aureus | NBRC12732 | 1.0 × 104 | negative |
MRSA | JCM8702 | 1.0 × 104 | negative |
Staphylococcus epidermidis | JCM2414 | 1.0 × 104 | negative |
Streptococcus pyogenes | RIMD 3123004 | 1.0 × 104 | negative |
Streptococcus sanguinis | JCM5708 | 1.0 × 104 | negative |
Streptococcus pneumoniae | NBRC102642 | 1.0 × 104 | negative |
Enterococcus faecalis | JCM20313 | 1.0 × 104 | negative |
Corynebacterium diphtheriae | JCM1310 | 1.0 × 104 | negative |
Bacillus cereus | JCM20266 | 1.0 × 104 | negative |
Clostridium perfringens | JCM1290 | 1.0 × 104 | negative |
Propionibacterium acnes | JCM6425 | 1.0 × 104 | negative |
Nocardia asteroides | NBRC14403 | 1.0 × 104 | negative |
Gram-negative strains | |||
Escherichia coli | JCM20135 | 1.0 × 104 | negative |
Klebsiella pneumoniae | JCM1662 | 1.0 × 104 | negative |
Pseudomonas aeruginosa | JCM6425 | 1.0 × 104 | negative |
Moraxella lacunata | JCM20914 | 1.0 × 104 | negative |
Myco Finder PCR | DNA Staining | Nested PCR | Real-Time PCR ** | |
---|---|---|---|---|
Method | Semi-quantitative PCR | Staining | Qualitative PCR | Quantitative PCR |
Testing | Simplified | Experienced | Experienced | Experienced |
Specimens | Cells (≤1 × 106) | Culture supernatant | Culture supernatant | Cells (≤5 × 106) |
Sensitivity | 10 CFU/mL | 100 CFU/mL | 100 CFU/mL | 10 CFU/mL |
Testing time * | 140 min | 6 days | 6 h | 4~5 h |
JapanesePharmacopoeia | 17th revision | 16th revision | 16th revision | 17th revision |
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Sugita, S.; Hono, A.; Fujino, S.; Futatsugi, Y.; Yunomae, Y.; Shimizu, N.; Takahashi, M. Detection of Mycoplasma Contamination in Transplanted Retinal Cells by Rapid and Sensitive Polymerase Chain Reaction Test. Int. J. Mol. Sci. 2021, 22, 12555. https://doi.org/10.3390/ijms222212555
Sugita S, Hono A, Fujino S, Futatsugi Y, Yunomae Y, Shimizu N, Takahashi M. Detection of Mycoplasma Contamination in Transplanted Retinal Cells by Rapid and Sensitive Polymerase Chain Reaction Test. International Journal of Molecular Sciences. 2021; 22(22):12555. https://doi.org/10.3390/ijms222212555
Chicago/Turabian StyleSugita, Sunao, Ayumi Hono, Shoko Fujino, Yoko Futatsugi, Yuta Yunomae, Norio Shimizu, and Masayo Takahashi. 2021. "Detection of Mycoplasma Contamination in Transplanted Retinal Cells by Rapid and Sensitive Polymerase Chain Reaction Test" International Journal of Molecular Sciences 22, no. 22: 12555. https://doi.org/10.3390/ijms222212555
APA StyleSugita, S., Hono, A., Fujino, S., Futatsugi, Y., Yunomae, Y., Shimizu, N., & Takahashi, M. (2021). Detection of Mycoplasma Contamination in Transplanted Retinal Cells by Rapid and Sensitive Polymerase Chain Reaction Test. International Journal of Molecular Sciences, 22(22), 12555. https://doi.org/10.3390/ijms222212555