Next Article in Journal
Secretome Analysis of the Plant Biostimulant Bacteria Strains Bacillus subtilis (EB2004S) and Lactobacillus helveticus (EL2006H) in Response to pH Changes
Next Article in Special Issue
Assessment of the Permeability of 3,4-Methylenedioxypyrovalerone (MDPV) across the Caco-2 Monolayer for Estimation of Intestinal Absorption and Enantioselectivity
Previous Article in Journal
Excess BAFF Alters NR4As Expression Levels and Breg Function of Human Precursor-like Marginal Zone B-Cells in the Context of HIV-1 Infection
Previous Article in Special Issue
Giardia lamblia G6PD::6PGL Fused Protein Inhibitors Decrease Trophozoite Viability: A New Alternative against Giardiasis
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Article

Adamantane-Substituted Purine Nucleosides: Synthesis, Host–Guest Complexes with β-Cyclodextrin and Biological Activity

1
Department of Chemistry, Faculty of Technology, Tomas Bata University in Zlín, Vavrečkova 5669, 760 01 Zlín, Czech Republic
2
Department of Experimental Biology, Palacký University, Šlechtitelů 27, 783 71 Olomouc, Czech Republic
3
Department of Chemistry, Faculty of Science, Masaryk University, Kotlářská 2, 602 00 Brno, Czech Republic
*
Author to whom correspondence should be addressed.
Int. J. Mol. Sci. 2022, 23(23), 15143; https://doi.org/10.3390/ijms232315143
Submission received: 15 November 2022 / Revised: 28 November 2022 / Accepted: 30 November 2022 / Published: 1 December 2022
(This article belongs to the Special Issue Recent Advances: Heterocycles in Drugs and Drug Discovery)

Abstract

:
Purine nucleosides represent an interesting group of nitrogen heterocycles, showing a wide range of biological effects. In this study, we designed and synthesized a series of 6,9-disubstituted and 2,6,9-trisubstituted purine ribonucleosides via consecutive nucleophilic aromatic substitution, glycosylation, and deprotection of the ribofuranose unit. We prepared eight new purine nucleosides bearing unique adamantylated aromatic amines at position 6. Additionally, the ability of the synthesized purine nucleosides to form stable host–guest complexes with β-cyclodextrin (β-CD) was confirmed using nuclear magnetic resonance (NMR) and mass spectrometry (ESI-MS) experiments. The in vitro antiproliferative activity of purine nucleosides and their equimolar mixtures with β-CD was tested against two types of human tumor cell line. Six adamantane-based purine nucleosides showed an antiproliferative activity in the micromolar range. Moreover, their effect was only slightly suppressed by the presence of β-CD, which was probably due to the competitive binding of the corresponding purine nucleoside inside the β-CD cavity.

Graphical Abstract

1. Introduction

Purine nucleosides represent one of the most widespread groups of nitrogen heterocycles in nature. They have been developed as analogues to their physiological counterparts, endogenous nucleosides participating in biological processes such as DNA or RNA synthesis, metabolism, cell signaling, and enzyme regulation [1]. A wide range of significant biological effects have recently been described for synthetically prepared purine nucleosides or their bioisosteres. For example, they can act as adenosine receptor ligands [2], plant growth regulators [3], or antiviral [3,4,5,6], antitumor [5,6,7,8], and antiprotozoal agents [9,10,11,12]. From a synthetic point of view, purine nucleosides represent an interesting class of compounds with structural diversity and nearly unrestricted possibilities for modifying the purine ring, especially at positions C2, C6, and N9 [13,14].
Adamantane (systematically tricyclo[3.3.1.13,7]decane) is a member of a group of compounds collectively referred to as cage hydrocarbons. Consisting of three cyclohexane rings in an almost ideal chair conformation, adamantane is a highly lipophilic motif introduced into the known pharmacophores to obtain biologically active compounds with a better pharmacological profile. For example, Papanastasiou and co-workers published a study dealing with the synthesis and biological evaluation of novel nifurtimox-like derivatives with the 5-nitrofuran-2-yl pharmacophore. The introduction of the adamantane motif led to higher antitrypanosomal activity and better selectivity of the new derivatives in comparison to the parent compound [15]. Structural modifications can also be carried out on drugs already containing an adamantane moiety. For instance, CMD-05, a novel orally available vildagliptin-derived dipeptidyl peptidase IV inhibitor shows a similar in vivo activity and has a much longer half-life and lower cytotoxicity than vildagliptin [16]. Notably, potential adamantane-based drugs show a wide range of interesting biological activities, such as antitumor [17,18,19], antiviral [20,21], antitrypanosomal [15,22,23], and tuberculostatic activities [22,24,25]. They can also act as cannabinoid receptor ligands [26,27,28] and adenosine receptor agonists [29,30]. Interestingly, only a few purine nucleosides bearing an adamantane moiety have been reported to date. It is possible to mention the compounds AD1–D4 (Figure 1) that were studied for their potency in displaying an antitrypanosomal activity [23] or affinity to adenosine receptors [29,30].
On the other hand, introducing an adamantane motif into the structure of the considered biologically-active substances can lead to a slight decrease in the solubility of the final compound in a water environment. This limitation can be overcome using one of the most interesting properties of the adamantane moiety, i.e., its ability to form relatively stable supramolecular host–guest complexes with cyclodextrins (CDs) [31,32]. CDs represent non-toxic, biodegradable, and water-soluble cyclic oligosaccharides, originating via bacterial degradation of starch. Natural CDs, consisting of six to eight glucose subunits linked by α-(1,4)-glycosidic bonds, are generally known as α-, β-, and γ-CD, respectively. CDs resemble a truncated cone shape with a hydrophilic exterior of their cavity (due to the presence of primary and secondary hydroxyl groups) and a hydrophobic cavity interior, in which a lipophilic guest molecule (or part of it) can be included via non-covalent interactions. Several types of modified CDs, prepared by the transformation of hydroxyl groups with different functional motifs, have been synthesized, with the aim of improving the water solubility of natural CDs [33]. The influence of the host–guest complex formation between potential drug candidates and CDs (natural and/or modified), for example, on water solubility, biological activity, bioavailability, and/or stability, has been extensively studied [31,32,34,35,36,37].
Inspired by a previously published study dealing with the antiproliferative activity of natural cytokinin ribosides [11], such as ortho-, meta- and para-topolin ribosides (hereinafter discussed as o-TR, m-TR and p-TR, respectively) and N6-benzyladenosine (BAR), we synthesized a novel series of purine ribonucleosides substituted at C6 with aromatic amines bearing an adamantane moiety (Figure 2). Moreover, the ability of the prepared compounds to form stable host–guest complexes with β-CD was studied using nuclear magnetic resonance (NMR) and electrospray ionization mass spectrometry (ESI-MS). The new purine nucleosides and their equimolar mixtures with β-CD were assayed for their antiproliferative activity.

2. Results and Discussion

2.1. Chemistry

For the synthesis of a novel series of adamantane-substituted purine nucleosides, two starting purine derivatives, namely 6-chloro-9H-purine (2) and 2,6-dichloro-9H-purine (3), were used. Compound 2 was prepared using a slightly modified literature procedure [38] through the reaction of commercially available hypoxanthine (1) with phosphoryl oxychloride in dimethylaniline (Scheme 1). Compound 3 was obtained from commercial sources and used without further purification.
The introduction of the previously prepared adamantylated aromatic amines [39] or aniline (as a model substituent) to position C6 of purines 2 and 3, respectively, led to the formation of compounds 49 (Scheme 2). The nucleophilic aromatic substitution of chlorine at C6 was carried out using two molar excess of the corresponding amine in refluxing propan-2-ol [40]. Purines 49 were isolated, after the purification using column chromatography and/or crystallization, in good purity and high yields (90–96%).
According to our synthetic strategy, we subsequently performed glycosylation of purines 49 at position N9 of the purine ring with commercially available 1-O-acetyl-2,3,5-O-benzoyl ribofuranose. To optimize this step, we carried out a series of reactions under different conditions (catalysator, solvent, temperature) [41,42,43] with model compounds 4 and 7. During the optimization, we achieved the best results using modified Hilbert–Johnson glycosylation [44] under catalysis with trimethylsilyl trifluoromethanesulfonate (TMSOTf) in CH3CN at room temperature (hereinafter referred to as “method A”), and two-step Vörbruggen glycosylation [45] using N,O-bis(trimethylsilyl)acetamide (BSA) followed by glycosylation with TMSOTf in CH3CN at 75 °C (hereinafter referred to as “method B”). Interestingly, we obtained the desired compounds in different yields, depending on the substitution of the starting purine at the C2 position. In the case of purine 4, bearing a hydrogen atom at C2, compound 10 was isolated, yielding about 54% using method A, while method B provided the same compound, yielding 31%. When these conditions were applied to purine 7 (with chlorine at C2), we obtained the desired compound 13, yielding 51% (method A) and 97% (method B), respectively. According to these results we decided to prepare glycosylated purines bearing a 1-adamantyl moiety depending on the substitution of the starting purines at the C2 position. While compounds 11 and 12 were synthesized using method A, purines 14 and 15 were prepared using method B, as depicted in Scheme 3.
Deprotection of benzoyl groups from purine nucleosides 1015 was carried out under the Zemplén conditions [46] using sodium methoxide in MeOH at room temperature (Scheme 3). The desired nucleosides 1621 were prepared in good purity, with yields of about 77–95%.
Finally, reduction of the oxo group linking the 1-adamantyl moiety and the benzene ring of the purine nucleosides 17, 18, 20, and 21 was performed. The reaction was carried out using a slight excess of sodium borohydride in EtOH and provided the required alcohols 2225 in yields of 80–90% (Scheme 4). It should be noted that we observed only one set of signals in the 1H-NMR spectra of purines 2225 (see Supplementary Materials, Figures S38, S40, S42 and S44, respectively), so we assume that either the reaction proceeded diastereoselectively or that the diastereoisomers cannot be distinguished using NMR.
The structure of all the prepared compounds was proposed based on the results obtained by infrared spectroscopy, electron and/or electrospray ionization mass spectrometry, and 1H- and 13C-nuclear magnetic resonance (see Experimental Section 3.2, Section 3.3, Section 3.4, Section 3.5 and Section 3.6). Moreover, the molecular structure of purine 13 was proven using X-ray diffraction analysis, confirming the origination of β-nucleoside, as shown in Figure 3 (for all the geometric parameters, see Supplementary Materials, Figure S46 and Table S1). 1H- and 13C-NMR of the prepared compounds are given in the Supplementary Materials (Figures S1–S45).

2.2. Host–Guest Complexes with β-CD

2.2.1. ESI-MS Analyses

The ability of purine nucleosides 1625 to form host–guest complexes with β-CD in the gas phase was studied in both positive and negative-ion polarity modes. The equimolar mixture of the corresponding purine nucleoside and β-CD was prepared immediately before each experiment.
In the first-order mass spectra obtained in the positive-ion polarity mode, ions originating from the macrocycle, the corresponding purine nucleoside and their supramolecular complex were observed. The guest molecule was represented by singly charged ions, which we assigned as a protonated molecule [M + H+]+, and sodium [M + Na+]+ and potassium [M + K+]+ adducts of the molecule. These ions were accompanied by a singly charged ion approximately twice as high, assigned as the sodium adduct of the dimer [2·M + Na+]+. Two singly charged ions with m/z at 1157 and 1173, respectively, were assigned as sodium and potassium adducts of the β-CD ([β-CD + Na+]+ and [β-CD + K+]+), respectively. The value of the last ion observed in the spectrum corresponds to the sodium adduct of the host–guest complex with 1:1 stoichiometry ([M@β-CD + Na+]+).
In the negative-ion polarity mode, singly charged ions assigned as a deprotonated molecule [M–H+] and the chloride adduct of the molecule [M + Cl] were observed. The last ion related to the examined compound was assigned as a deprotonated molecule lacking the ribose unit [M–H+–C5H8O4]. The structure of this ion was proposed according to the tandem mass spectrometry (MS/MS) experiment of the deprotonated molecule under collision-induced dissociation conditions. According to the obtained results, we can suggest that the last ion originated in the ion source as a product of the in-source fragmentation. Two ions, singly (at m/z 1133) and doubly charged (at m/z 566), were assigned as deprotonated molecules of the macrocycle ([β-CD–H+] and [β-CD–2·H+]2−, respectively). Finally, we observed the ion at m/z corresponding to the 1:1 host–guest complex assigned as [M@β-CD–H+]. Unfortunately, all attempts to isolate and subsequently fragment (MS/MS) the ions corresponding to the host–guest complex were unsuccessful. Illustrative positive and negative-ion mass spectra of the equimolar mixture of purine 24 with β-CD are shown in Figure 4.

2.2.2. Nuclear Magnetic Resonance Analyses

Consequently, we employed NMR spectroscopy to gain an independent confirmation of the host–guest complex formation. We selected compound 24 as a representative of purine glycosides and examined its mixture with β-CD. These experiments were carried out in a DMSO-d6/D2O (2/1, v/v) mixture, due to insufficient solubility of the glycosides in pure water. Initially, we recorded two 1H-NMR spectra for a single compound 24 and its mixture with one equivalent of β-CD, respectively. Portions of these spectra are shown in Figure 5A. We observed clear complexation-induced shifts (CIS) of 0.10 ppm, 0.07, and −0.10 ppm for the adamantane bridgehead H(e) atoms and aromatic H(b) and H(c) atoms, respectively. The downfield shift of adamantane signals is well recognized as an indication of the inclusion of the adamantane moiety into the β-CD cavity [47,48]. In addition, we performed a 2D 1H-1H ROESY experiment on the equimolar mixture of 24 and β-CD. As can be seen in Figure 5B, this experiment revealed the spatial proximity of the adamantane H(e)-atoms and cyclodextrin H3 and H5 atoms, which decorate the interior of the β-CD cavity. The corresponding cross-peaks are indicated by red arrows in Figure 5B. These results imply that a significant portion of compound 24 was present in the form of an inclusion complex with the adamantane moiety immersed in the β-CD cavity in a DMSO/water mixture. However, this conclusion can be extended to the water environment, since the hydrophobic effect, where strength increases with the polarity of the medium, is the most important stabilization force in the case of CD complexes.

2.3. Antiproliferative Activity

The antiproliferative activity of purine nucleosides 1625 was tested against two types of human tumor cell lines, namely MV4;11 (acute myelogenous leukemia) and K562 (chronic myelogenous leukemia). The in vitro activity was studied with both single purine nucleosides and their equimolar mixtures with β-CD (Table 1). Purine nucleosides 16 and 19 (with a phenyl ring at C6) were used as reference compounds. They showed no effect, both singly and with β-CD mixtures, against the tested cell lines for concentrations up to 25 μM. On the other hand, most of the adamantylated purine nucleosides (except compounds 17 and 25) displayed antiproliferative activity against the MV4;11 cell line in the micromolar range (IC50 = 12.3–23.8 μM). The highest efficacy was shown by compounds with chlorine at C2 and a para-substituted aromatic ring at C6, namely purine 20 (with the oxo group between 1-adamantyl and the benzene ring) and purine 24 (with the hydroxy group between 1-adamantyl and the benzene ring). A similar antiproliferative activity was observed for purine 23 with a hydrogen atom at C2 and a hydroxy group between 1-adamantyl and benzene ring. Purine nucleosides 18, 21, and 22 showed effects against MV4;11 in concentrations higher than 20 μM.
Unfortunately, most of the prepared purine nucleosides and their mixtures with β-CD showed no antiproliferative activity against the K562 cell line for concentrations up to 25 μM. On the other hand, purine nucleosides 20 and 24 inhibited cell proliferation of this cell line in the micromolar range (IC50 = 21.4 and 23.4 μM, respectively). Similar results were previously published for a series of structurally related compounds (see Figure 2), where meta- and para-topolin-β-d-ribofuranosides showed no antiproliferative activity against K562. In comparison, the ortho-substituted derivative and N6-benzyladenosine (without hydroxyl group at the phenyl ring) displayed effects in the micromolar range [11].
Interestingly, purine nucleosides 18 and 2024, inhibiting the cell proliferation of one or both tested cell lines, also showed activity as equimolar mixtures with β-CD. This fact implied the presence of relatively stable supramolecular host–guest complexes of the prepared purine nucleosides with β-CD, as suggested by the NMR and ESI-MS analyses. The slight decrease in the antiproliferative activity of purine·β-CD equimolar mixtures could be explained as the result of competition for the biological target with β-CD for a corresponding purine nucleoside.

3. Materials and Methods

3.1. General Data

All starting compounds, reagents, and solvents were purchased from commercial sources in analytical quality and were used without further purification. Adamantylated aromatic amines were prepared following previously published procedures [39,49,50]. Melting points were measured on a Kofler block and were not corrected. Elemental analyses (C, H, N, S) were performed with a Thermo Fisher Scientific Flash EA 1112. Retention times were determined using thin-layer chromatography (TLC) plates (Alugram Sil G/UV) from Machrey-Nagel. Several types of mobile phases were used: CHCl3/EtOAc, 7/3, v/v (system a), CHCl3/MeOH, 5/1, v/v (system b), CHCl3/MeOH, 8/1, v/v (system c), CHCl3/MeOH, 12/1, v/v (system d), CHCl3/EtOH, 19/1, v/v (system e), CHCl3/EtOH, 4/1, v/v (system f), PE/EtOAc, 8/1, v/v (system h), and EtOAc/MeOH, 9/1, v/v (system i). The NMR spectra were recorded on a Bruker Avance-500 spectrometer at 500.13 MHz (1H) and 125.77 MHz (13C), or a JEOL ECZ400R spectrometer at 399.78 MHz (1H) and 100.95 MHz (13C). 1H- and 13C-NMR chemical shifts were referenced to the signal of the solvent (1H: δ(residual CHCl3) = 7.27 ppm and δ(residual DMSO-d5) = 2.5 ppm; 13C: δ(CDCl3) = 77.23 ppm and δ(DMSO-d6) = 39.51 ppm). The ROESY experiments were carried out with a spin-lock time of 600 ms. The IR spectra were recorded in a KBr disc with a Nicolet Avatar-380 spectrophotometer. GC-EI-MS analyses were run on a Shimadzu QP-2010 instrument using a Supelco SLB-5ms (30 m, 0.25 mm) column. Helium was employed as a carrier gas in constant linear flow mode (38 cm s−1): 100 °C/7 min, 25 °C/min to 250 °C, and held for the required amount of time. Electrospray mass spectra (ESI–MS) were recorded using an amaZon X ion-trap mass spectrometer (Bruker Daltonics, Bremen, Germany) equipped with an electrospray ionization source. All experiments were conducted in both positive- and negative-ion polarity modes. The instrumental conditions used to measure the single purine nucleosides and their mixtures with the host molecules were different; therefore, they are described separately. Single guests: Individual samples (with concentrations of 0.5 μg cm−3) were infused into the ESI source in MeOH/H2O (1/1, v/v) solutions using a syringe pump with a constant flow rate of 3 μL min−1. The other instrumental conditions were as follows: an electrospray voltage of ±4.2 kV, a capillary exit voltage of ±140 V, a drying gas temperature of 220 °C, a drying gas flow rate of 6.0 dm3 min−1, and a nebulizer pressure of 55.16 kPa. Host–guest complexes: An aqueous solution of the guest (12.5 μM) and an equimolar amount of the host were infused into the ESI source at a constant flow rate of 3 μL min−1. The other instrumental conditions were as follows: an electrospray voltage of ±4.0 kV, a capillary exit voltage of 40 V up to −100 V, a drying gas temperature of 300 °C, a drying gas flow rate of 6.0 dm3 min−1, and a nebulizer pressure of 206.84 kPa. Nitrogen was used as both the nebulizing and drying gas for all of the experiments. Tandem mass spectra were collected using CID, with He as the collision gas, after the isolation of the required ions. Diffraction data were collected on a Rigaku MicroMax-007 HF rotating anode four-circle diffractometer using Mo radiation at 120 K. The structure was solved using direct methods and refined using full-matrix least-squares methods on F2 using the SHELXTL software package [51]. All non-hydrogen atoms were refined anisotropically, and hydrogen atoms were refined as riding on their carrier atoms. Crystal data and refinement parameters are gathered in Table S1 (see Supplementary Materials). The supplementary crystallographic data can be obtained free of charge from The Cambridge Crystallographic Data Centre via www.ccdc.cam.ac.uk/data_request/cif (accessed on 12 November 2022) (reference code: 2219330).

3.2. Synthesis of 6-Chloro-9H-purine (2)

Compound 2 was prepared following a modified literature procedure [38]. Into a well-stirred mixture of hypoxanthine (1) (200 mg, 1.47 mmol) in N,N-dimethylaniline (3 cm3), phosphoryl oxychloride (15 cm3) was added dropwise at 0 °C. After this, the reaction mixture was refluxed under an inert atmosphere till the TLC indicated the consumption of all starting material (ca 3 h). During this time, the pale green color of the solution changed to dark red. The reaction mixture was cooled down and the liquid was evaporated in a vacuum. The obtained dark green oil was poured onto crushed ice (ca 80 cm3) and the mixture was stirred. After the dissolution of the ice, the mixture was neutralized using concentrated ammonia (9 cm3), the water layer was extracted with CHCl3 (3 × 5 cm3) and evaporated in a vacuum. The obtained yellow crystalline solid was repeatedly washed with hot CH3CN (to remove the inorganic co-products), and combined CH3CN portions were dried over sodium sulfate and evaporated in a vacuum. Purification of the crude product using column chromatography (system b) provided the desired compound 2.
6-Chloro-9H-purine (2)
Pale yellow crystalline powder, yield 187 mg (82%), mp 212–214 °C, Rf = 0.42 (system b). 1H NMR (DMSO-d6, 500 MHz): δ 8.44 (s, 1H, C2H), 8.63 (d, 1H, J = 6.51 Hz, C8H) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 129.3 (C), 145.3 (C), 147.9 (C), 151.8 (C), 153.8 (C) ppm (NMR match the literature [52]). IR (KBr): 3064 (m), 2934 (m), 2804 (m), 1604 (m), 1573 (s), 1549 (m), 1445 (m), 1390 (s), 1325 (s), 1285 (s), 1234 (m), 988 (m), 850 (m), 693 (m), 604 (m) cm−1. GC-EI-MS m/z (%): 156 (M+(37Cl), 30), 155 (7), 154 (M+(35Cl), 97), 147 (6), 135 (11), 120 (7), 119 (100), 99 (13), 92 (36), 85 (10), 74 (7), 73 (28), 67 (8), 66 (7), 65 (29), 64 (11), 60 (19), 52 (13), 51 (6), 46 (13), 45 (40), 44 (21), 43 (23), 42 (6), 40 (6). ESI-MS (pos.) m/z (%): 193.1 [M(35Cl) + K+]+ (24), 177.1 [M(35Cl) + Na+]+ (19), 155.1 [M(35Cl) + H+]+ (100). ESI-MS (neg.) m/z (%): 153.0 [M(35Cl) − H+] (100). Anal. Cald for C5H3ClN4: C 38.86; H 1.96; N 36.25. Found: C 38.52; H 2.14; N 36.38.

3.3. General Procedure for the Preparation of 6-‘Amino’-9H-purine Derivatives 49

Compounds 49 were prepared following a slightly modified literature procedure [40]. The starting purine 2 (1.30–1.75 mmol) or 3 (0.32–1.06 mmol) were dissolved in propan-2-ol (10 cm3), the corresponding aromatic amine (2.0 equiv.) was added into this solution, and the reaction mixture was refluxed. After 15–45 minutes of reflux, the formation of a slightly yellow precipitation was observed. The reaction mixture was refluxed till the TLC indicated the consumption of all starting material (3–24 h). After this, the precipitation was filtrated with suction and washed with cold propan-2-ol several times. Purification of the crude product using column chromatography (system c or d) and/or crystallization resulted in the desired products.
N-phenyl-9H-purin-6-amine (4)
Prepared from compound 2 (202 mg, 1.30 mmol) and aniline (2.60 mmol). Purified using crystallization from MeOH/CHCl3. Pale yellow crystalline powder, yield 265 mg (96%), mp 288–290 °C, Rf = 0.41 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 7.22 (t, 1H, J = 7.25 Hz, Ph), 7.45 (t, 2H, J = 7.35 Hz, Ph), 7.92 (d, 2H, J = 7.67 Hz, Ph), 8.75 (s, 1H, C2H), 8.83 (d, 1H, C8H), 11.65 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 121.3 (CH(Ph)), 124.8 (CH(Ph)), 128.9 (CH(Ph)), 137.7 (C(Ph)), 143.3 (C), 148.4 (C), 149.6 (C) ppm. IR (KBr): 3104 (s), 2976 (s), 2613 (m), 1652 (s), 1617 (s), 1594 (s), 1500 (s), 1440 (s), 1390 (s), 1216 (m), 908 (w), 754 (m), 686 (m), 615 (m), 590 (m) cm−1. GC-EI-MS m/z (%): 212 (7), 211 (M+, 54), 210 (100), 156 (8), 129 (7), 105 (6), 104 (7), 103 (8), 93 (7), 92 (17), 78 (5), 77 (33), 76 (5), 66 (11), 65 (18), 53 (6), 52 (5), 51 (22), 50 (6), 44 (17), 43 (6). ESI-MS (pos.) m/z (%): 212.2 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 210.1 [M − H+] (100). Anal. Cald for C11H9N5: C 62.55; H 4.29; N 33.16. Found: C 62.57; H 4.11; N 33.06.
(1-Adamantyl){4-[(9H-purin-6-yl)-amino]phenyl}methanone (5)
Prepared from compound 2 (268 mg, 1.73 mmol) and (1-adamantyl)(4-aminophenyl)methanone (3.46 mmol). Purified using column chromatography (system c). Pale yellow crystalline powder, yield 624 mg (96%), mp 317–318 °C, Rf = 0.50 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.72 (m, 6H, CH2(Ad)), 1.97 (m, 6H, CH2(Ad)), 2.02 (m, 3H, CH(Ad)), 7.78 (d, 2H, J = 7.35 Hz, Ph), 8.04 (d, 2H, J = 7.35 Hz, Ph), 8.77 (s, 1H, C2H), 8.88 (s, 1H, C8H), 11.65 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.6 (CH2(Ad)), 36.0 (CH(Ad)), 38.6 (CH2(Ad)), 46.1 (C(Ad)), 113.2 (CH(Ph)), 119.9 (CH(Ph)), 128.8 (CH(Ph)), 133.7 (C(Ph)), 140.4 (C), 143.1 (C), 149.0 (C), 149.3 (C), 149.5 (C), 206.7 (PhCOAd) ppm. IR (KBr): 2904 (s), 2850 (m), 1628 (s), 1589 (s), 1533 (m), 1479 (s), 1411 (m), 1358 (m), 1323 (m), 1273 (m), 1238 (s), 1174 (m), 929 (w), 750 (w), 644 (w) cm−1. ESI-MS (pos.) m/z (%): 747.2 [2·M + H+]+ (5), 412.2 [M + K+]+ (4), 396.3 [M + Na+]+ (9), 374.3 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 781.3 [2·M + Cl] (14), 745.3 [2·M − H+] (7), 408.2 [M + Cl] (20), 372.2 [M − H+] (100). Anal. Cald for C22H23N5O: C 70.76; H 6.21; N 18.75. Found: C 70.42; H 5.93; N 18.86.
(1-Adamantyl){3-[(9H-purin-6-yl)-amino]phenyl}methanone (6)
Prepared from compound 2 (271 mg, 1.75 mmol) and (1-adamantyl)(3-aminophenyl)methanone (3.50 mmol). Purified using column chromatography (system c). Pale yellow crystalline powder, yield 596 mg (91%), mp 309–315 °C, Rf = 0.47 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.72 (m, 6H, CH2(Ad)), 1.97 (m, 6H, CH2(Ad)), 2.03 (m, 3H, CH(Ad)), 7.36 (d, 1H, J = 6.45 Hz, Ph), 7.50 (t, 1H, J = 6.35 Hz, Ph), 8,10 (d, 1H, J = 7.05 Hz, Ph), 8.27 (s, 1H, Ph), 8.73 (s, 1H, C2H), 8.81 (s, 1H, C8H), 11.62 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.5 (CH2(Ad)), 35.9 (CH(Ad)), 38.5 (CH2(Ad)), 46.2 (C(Ad)), 113.3 (CH(Ph)), 119.4 (CH(Ph)), 122.6 (CH(Ph)), 122.9 (CH(Ph)), 128.8 (CH(Ph)), 137.8 (C(Ph)), 139.1 (C), 143.0 (C), 148.9 (C), 149.1 (C), 149.8 (C), 208.0 (PhCOAd) ppm. IR (KBr): 2906 (s), 2852 (m), 1666 (s), 1574 (s), 1496 (s), 1433 (s), 1387 (m), 1346 (m), 1269 (m), 1250 (m), 1211 (m), 1128 (w), 997 (w), 784 (w), 611 (w) cm−1. ESI-MS (pos.) m/z (%): 747.3 [2·M + H+]+ (5), 412.2 [M + K+]+ (5), 396.3 [M + Na+]+ (8), 374.3 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 781.3 [2·M + Cl] (14), 745.3 [2·M − H+] (9), 408.2 [M + Cl] (31), 372.2 [M − H+] (100). Anal. Cald for C22H23N5O: C 70.76; H 6.21; N 18.75. Found: C 70.94; H 6.39; N 18.55.
N-phenyl-2-chloro-9H-purin-6-amine (7)
Prepared from compound 3 (200 mg, 1.06 mmol) and aniline (2.12 mmol). Purified using crystallization from CHCl3. Pale yellow crystalline powder, yield 247 mg (95%), mp 322–329 °C, Rf = 0.52 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 7.08 (t, 1H, J = 7.35 Hz, Ph), 7.36 (t, 2H, J = 7.45 Hz, Ph), 7.84 (d, 2H, J = 7.80 Hz, Ph), 8.29 (d, 1H, C8H), 10.12 (s, 1H, C6NHPh), 13.25 (s, 1H, N9H) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 121.5 (CH(Ph)), 123.8 (CH(Ph)), 129.0 (CH(Ph)), 139.4 (C(Ph)), 141.5 (C), 152.2 (C), 152.6 (C) ppm. IR (KBr): 3040 (bm), 2782 (bm), 1634 (s), 1561 (s), 1496 (s), 1434 (s), 1254 (s), 1177 (m), 1102 (m), 960 (m), 938 (m), 730 (m), 684 (m), 611 (m), 557 (m) cm−1. ESI-MS (pos.) m/z (%): 268.0 [M(35Cl) + Na+]+ (69), 246.0 [M(35Cl) + H+]+ (100). ESI-MS (neg.) m/z (%): 243.8 [M(35Cl) − H+] (100). Anal. Cald for C11H8ClN5: C 53.78; H 3.28; N 28.51. Found: C 53.68; H 3.26; N 28.40. Spectral data match the literature [53].
(1-Adamantyl){4-[(2-chloro-9H-purin-6-yl)-amino]phenyl}methanone (8)
Prepared from compound 3 (70 mg, 0.37 mmol) and (1-adamantyl)(4-aminophenyl)methanone (0.74 mmol). Purified using column chromatography (system d) and crystallization from MeOH. Colorless crystalline powder, yield 136 mg (90%), mp 292–298 °C, Rf = 0.30 (system d). 1H NMR (DMSO-d6, 500 MHz): δ 1.70–1.76 (m, 6H, CH2(Ad)), 1.98 (m, 6H, CH2(Ad)), 2.03 (m, 3H, CH(Ad)), 7.75 (d, 2H, J = 6.45 Hz, Ph), 7.98 (d, 2H, J = 6.45 Hz, Ph), 8.33 (s, 1H, C8H), 10.46 (s, 1H, C6NHPh), 13.38 (s, 1H, N9H) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.7 (CH2(Ad)), 36.0 (CH(Ad)), 38.7 (CH2(Ad)), 46.0 (C(Ad)), 119.5 (CH(Ph)), 128.8 (CH(Ph)), 132.4 (CH(Ph)), 140.4 (C(Ph)), 141.5 (C), 142.9 (C), 149.0 (C), 149.2 (C), 149.5 (C), 206.3 (PhCOAd) ppm. IR (KBr): 2906 (s), 2850 (m), 1649 (m), 1626 (m), 1585 (s), 1572 (s), 1533 (m), 1460 (s), 1412 (w), 1321 (s), 1236 (s), 1174 (m), 930 (m), 805 (w), 627 (m) cm−1. ESI-MS (pos.) m/z (%): 853.1 [2·M(35Cl) + K+]+ (5), 837.2 [2·M(35Cl) + Na+]+ (33), 446.1 [M(35Cl) + K+]+ (63), 430.1 [M(35Cl) + Na+]+ (100), 408.1 [M(35Cl) + H+]+ (18). ESI-MS (neg.) m/z (%): 813.1 [2·M(35Cl) − H+] (8), 406.1 [M(35Cl) − H+] (100). Anal. Cald for C22H22ClN5O: C 64.78; H 5.44; N 17.17. Found: C 64.75; H 5.19; N 17.47.
(1-Adamantyl){3-[(2-chloro-9H-purin-6-yl)-amino]phenyl}methanone (9)
Prepared from compound 3 (60 mg, 0.32 mmol) and (1-adamantyl)(3-aminophenyl)methanone (0.64 mmol). Purified using column chromatography (system d) and crystallization from i-PrOH. Pale yellow crystalline powder, yield 123 mg (94%), mp 332–338 °C, Rf = 0.44 (system d). 1H NMR (DMSO-d6, 500 MHz): δ 1.73 (m, 6H, CH2(Ad)), 1.99 (m, 6H, CH2(Ad)), 2.04 (m, 3H, CH(Ad)), 7.21 (d, 1H, J = 7.65 Hz, Ph), 7.43 (t, 1H, J = 7.90 Hz, Ph), 7.91 (d, 1H, J = 6.55 Hz, Ph), 8.32 (s, 1H, Ph), 8.34 (s, 1H, C8H), 10.35 (s, 1H, C6NHPh), 13.35 (s, 1H, N9H) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.5 (CH2(Ad)), 35.9 (CH(Ad)), 38.5 (CH2(Ad)), 46.1 (C(Ad)), 119.2 (CH(Ph)), 122.1 (CH(Ph)), 122.6 (CH(Ph)), 128.6 (CH(Ph)), 138.3 (C(Ph)), 138.9 (C(Ph)), 152.0 (C), 208.3 (PhCOAd) ppm. IR (KBr): 3345 (s), 2901 (m), 1662 (m), 1627 (s), 1583 (s), 1480 (m), 1430 (m), 1391 (w), 1348 (m), 1310 (s), 1243 (m), 1108 (w), 952 (m), 788 (m), 638 (w) cm−1. ESI-MS (pos.) m/z (%): 837.2 [2·M(35Cl) + Na+]+ (14), 446.1 [M(35Cl) + K+]+ (38), 430.1 [M(35Cl) + Na+]+ (100), 408.1 [M(35Cl) + H+]+ (26). ESI-MS (neg.) m/z (%): 813.1 [2·M(35Cl) − H+] (9), 406.0 [M(35Cl) − H+] (100). Anal. Cald for C22H22ClN5O: C 64.78; H 5.44; N 17.17. Found: C 64.54; H 5.42; N 17.36.

3.4. General Procedures for the Glycosylation of 6-‘Amino’-9H-purines (49)

Compounds 1015 were prepared following modified literature procedures, hereinafter referred to as “method A” [44] and “method B” [45], respectively.
“Method A”
The corresponding 6-‘amino’-9H-purine (0.20–0.27 mmol) and commercially available 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (3.0 equiv.) were added into the anhydrous acetonitrile (5 cm3). Into this suspension, trimethylsilyl trifluoromethanesulfonate (2.0 equiv.) was added in one portion, using a syringe. The resulting pale yellow solution was stirred at room temperature under an argon atmosphere till the TLC indicated the consumption of all starting material (4–6 h). After this, 5 cm3 of distilled water was added and the reaction mixture was stirred for 15 minutes. Subsequently, the mixture was extracted with ethyl acetate (7 × 10 cm3). The combined organic layers were washed twice with brine and dried over sodium sulfate. The solvent was removed by the evaporation in a vacuum. The desired compound was obtained after purification of the crude product using column chromatography.
“Method B”
The corresponding 6-‘amino’-9H-purine (0.24–0.72 mmol) was added into the anhydrous acetonitrile (5 cm3). Into this suspension, N,O-bis(trimethylsilyl)acetamide (2.0 equiv.) was added in one portion, using a syringe. The resulting solution was stirred at 75 °C under an argon atmosphere for 6 h. After this, a mixture of commercially available 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (1.1 equiv.) dissolved in anhydrous acetonitrile (1 cm3) and trimethylsilyl trifluoromethanesulfonate (1.0 equiv.) was added dropwise into the reaction mixture. The reaction mixture was stirred under the same conditions till the TLC indicated the consumption of all starting material (2–6 h). After this, 10 cm3 of distilled water was added and the reaction mixture was stirred for 15 minutes. Subsequently, the mixture was extracted with ethyl acetate (9 × 10 cm3). The combined organic layers were washed twice with brine and dried over sodium sulfate. The solvent was removed by evaporation in a vacuum. The desired compound was obtained after purification of the crude product using column chromatography.
N-phenyl-9-(2,3,5-tri-O-benzoyl-β-d-ribofuranos-1-yl)-9H-purin-6-amine (10)
Prepared using “method A” from compound 4 (50 mg, 0.24 mmol) and 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.72 mmol) and trimethylsilyl trifluoromethanesulfonate (0.48 mmol), and using “method B” from compound 4 (50 mg, 0.24 mmol), N,O-bis(trimethylsilyl)acetamide (0.48 mmol), and 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.24 mmol) and trimethylsilyl trifluoromethanesulfonate (0.24 mmol). Purified using column chromatography (system e). Colorless crystalline powder, yield (method A) 83 mg (54%), (method B) 48 mg (31%), mp 75–83 °C, Rf = 0.68 (system e). 1H NMR (DMSO-d6, 500 MHz): δ 4.67–4.70 (m, 1H, C5′H(Rib)), 4.81–4.84 (m, 1H, C5′H(Rib)), 4.89 (ddd, 1H, J1 = 4.30 Hz, J2 = 9.50 Hz, C4′H(Rib)), 6.31 (dd, 1H, J1 = 5.95 Hz, J2 = 11.90 Hz, C3′H(Rib)), 6.55 (dd, 1H, J1 = 5.00 Hz, J2 = 10.65 Hz, C2′H(Rib)), 6.63 (d, 1H, J = 4.40 Hz, C1′H(Rib)), 7.06 (t, 1H, J = 7.35 Hz, Ph), 7.34 (t, 2H, J = 7.65 Hz, Ph), 7.45–7.50 (m, 6H, Bz), 7.63–7.68 (m, 3H, Bz), 7.89–7.96 (m, 6H, Bz), 8.00 (d, 2H, J = 7.05 Hz, Ph), 8.32 (s, 1H, C2H), 8.57 (s, 1H, C8H), 9.96 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 63.2 (CH(Rib)), 70.7 (CH(Rib)), 73.1 (CH(Rib)), 79.2 (CH(Rib)), 86.5 (CH(Rib)), 120.4 (CH(Ph)), 121.0 (CH(Ph)), 122.8 (CH(Ph)), 128.3 (CH(Bz)), 128.5 (CH(Ph)), 128.6 (CH(Bz)), 128.7 (CH(Bz)), 129.2 (CH(Bz)), 129.3 (CH(Bz)), 133.4 (C(Bz)), 133.8 (C(Bz)), 133.9 (C(Bz)), 139.4 (C), 141.2 (C), 149.1 (C), 152.2 (C), 164.5 (CO(Bz)), 164.6 (CO(Bz)), 165.4 (CO(Bz)) ppm. IR (KBr): 3348 (bw), 3059 (w), 2926 (w), 1727 (s), 1622 (s), 1583 (s), 1477 (m), 1374 (m), 1268 (s), 1178 (m), 1122 (s), 1026 (m), 751 (w), 710 (s), 645 (w) cm−1. ESI-MS (pos.) m/z (%): 694.2 [M + K+]+ (5), 678.3 [M + Na+]+ (12), 656.3 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 654.2 [M − H+] (100). Anal. Cald for C37H29N5O7: C 67.78; H 4.46; N 10.68. Found: C 67.90; H 4.42; N 10.78.
(1-Adamantyl){4-[(9-(2,3,5-tri-O-benzoyl-β-d-ribofuranos-1-yl)-9H-purin-6-yl)amino]phenyl}methanone (11)
Prepared using “method A” from compound 5 (101 mg, 0.27 mmol) and 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.81 mmol) and trimethylsilyl trifluoromethanesulfonate (0.54 mmol). Purified using column chromatography (system a). Colorless crystalline powder, yield 164 mg (73%), mp 103–113 °C, Rf = 0.47 (system a). 1H NMR (DMSO-d6, 500 MHz): δ 1.68–1.75 (m, 6H, CH2(Ad)), 1.98 (m, 6H, CH2(Ad)), 2.02 (m, 3H, CH(Ad)), 4.66–4.69 (m, 1H, C5′H(Rib)), 4.81–4.84 (m, 1H, C5′H(Rib)), 4.89 (ddd, 1H, J1 = 1.70 Hz, J2 = 5.80 Hz, J3 = 8.25 Hz, C4′H(Rib)), 6.31 (dd, 1H, J1 = 6.15 Hz, J2 = 11.95 Hz, C3′H(Rib)), 6.55 (dd, 1H, J1 = 4.60 Hz, J2 = 5.80 Hz, C2′H(Rib)), 6.65 (d, 1H, J = 4.25 Hz, C1′H(Rib)), 7.44–7.52 (m, 6H, Bz), 7.63–7.68 (m, 3H, Bz), 7.77 (d, 2H, J = 8.85 Hz, Ph), 7.89–8.01 (m, 6H, Bz), 8.06 (d, 2H, J = 8.90 Hz, Ph), 8.37 (s, 1H, C2H), 8.62 (s, 1H, C8H), 10.32 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.7 (CH2(Ad)), 36.0 (CH(Ad)), 38.8 (CH2(Ad)), 46.0 (C(Ad)), 61.5 (CH(Rib)), 70.7 (CH(Rib)), 73.1 (CH(Rib)), 85.4 (CH(Rib)), 86.6 (CH(Rib)), 119.5 (CH(Ph)), 120.7 (CH(Ph)), 123.2 (CH(Ph)), 128.5 (CH(Ph)), 128.7 (C(Bz)), 128.8 (C(Bz)), 128.9 (C(Bz)), 129.3 (CH(Bz)), 129.4 (CH(Bz)), 133.5 (C(Bz)), 133.9 (C(Bz)), 134.0 (C(Bz)), 141.8 (C), 149.4 (C), 151.0 (C), 152.0 (C), 152.2 (C), 164.7 (CO (Bz)), 164.9 (CO (Bz)), 165.6 (CO (Bz)), 208.2 (PhCOAd) ppm. IR (KBr): 2905 (s), 2851 (s), 1729 (s), 1655 (w), 1605 (m), 1580 (s), 1473 (m), 1370 (m), 1270 (s), 1176 (m), 1121 (m), 1094 (m), 1026 (m), 987 (w), 711 (s) cm−1. ESI-MS (pos.) m/z (%): 856.3 [M + K+]+ (6), 840.3 [M + Na+]+ (16), 818.4 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 816.3 [M − H+] (100). Anal. Cald for C48H43N5O8: C 70.49; H 5.30; N 8.56. Found: C 70.66; H 5.27; N 8.41.
(1-Adamantyl){3-[(9-(2,3,5-tri-O-benzoyl-β-d-ribofuranos-1-yl)-9H-purin-6-yl)amino]phenyl}methanone (12)
Prepared using “method A” from compound 6 (101 mg, 0.27 mmol) and 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.81 mmol) and trimethylsilyl trifluoromethanesulfonate (0.54 mmol). Purified using column chromatography (system a). Colorless crystalline powder, yield 130 mg (59%), mp 94–105 °C, Rf = 0.50 (system a). 1H NMR (DMSO-d6, 500 MHz): δ 1.69–1.71 (m, 6H, CH2(Ad)), 1.96–1.98 (m, 6H, CH2(Ad)), 2.03 (m, 3H, CH(Ad)), 4.65–4.69 (m, 1H, C5′H(Rib)), 4.81–4.84 (m, 1H, C5′H(Rib)), 4.89 (ddd, 1H, J1 = 3.65 Hz, J2 = 8.25 Hz, C4′H(Rib)), 6.31 (dd, 1H, J1 = 5.85 Hz, J2 = 11.95 Hz, C3′H(Rib)), 6.56 (dd, 1H, J1 = 4.60 Hz, J2 = 10.40 Hz, C2′H(Rib)), 6.65 (d, 1H, J = 4.55 Hz, C1′H(Rib)), 7.22 (d, 1H, J = 6.45 Hz, Ph), 7.37–7.57 (m, 6H, Bz), 7.63 (t, 1H, J = 1.25 Hz, Ph), 7.64–7.71 (m, 3H, Bz), 7.86–8.01 (m, 6H, Bz), 8.10 (d, 1H, J = 7.05 Hz, Ph), 8.30 (s, 1H, Ph), 8.38 (s, 1H, C2H), 8.60 (s, 1H, C8H), 10.23 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 28.1 (CH2(Ad)), 36.5 (CH(Ad)), 39.1 (CH2(Ad)), 46.7 (C(Ad)), 63.3 (CH(Rib)), 70.7 (CH(Rib)), 73.1 (CH(Rib)), 82.9 (CH(Rib)), 86.5 (CH(Rib)), 119.9 (CH(Ph)), 121.1 (CH(Ph)), 123.2 (CH(Ph)), 128.5 (CH(Ph)), 129.0 (CH(Bz)), 129.1 (CH(Bz)), 129.2 (CH(Bz)), 129.3 (CH(Bz)), 129.5 (CH(Bz)), 129.7 (CH(Bz)), 129.8 (C(Ph)), 130.0 (C(Ph)), 134.0 (C(Bz)), 134.4 (C(Bz)), 134.5 (C(Bz)), 139.1 (C), 139.5 (C), 142.1 (C), 149.8 (C), 152.7 (C), 164.5 (CO(Bz)), 164.7 (CO(Bz)), 165.4 (CO(Bz)), 208.1 (PhCOAd) ppm. IR (KBr): 2905 (s), 2851 (m), 1728 (s), 1667 (w), 1621 (m), 1602 (m), 1580 (s), 1474 (m), 1371 (m), 1270 (s), 1177 (m), 1122 (m), 1026 (m), 998 (w), 711 (s) cm−1. ESI-MS (pos.) m/z (%): 856.3 [M + K+]+ (7), 840.3 [M + Na+]+ (19), 818.4 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 816.3 [M − H+] (100). Anal. Cald for C48H43N5O8: C 70.49; H 5.30; N 8.56. Found: C 70.68; H 5.42; N 8.48.
N-phenyl-2-chloro-9-(2,3,5-tri-O-benzoyl-β-d-ribofuranos-1-yl)-9H-purin-6-amine (13)
Prepared using “method A” from compound 7 (50 mg, 0.20 mmol) and 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.60 mmol) and trimethylsilyl trifluoromethanesulfonate (0.40 mmol), and using “method B” from compound 7 (60 mg, 0.24 mmol), N,O-bis(trimethylsilyl)acetamide (0.48 mmol), 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.26 mmol), and trimethylsilyl trifluoromethanesulfonate (0.48 mmol). Purified using column chromatography (system e). Colorless crystalline powder, yield (method A) 71 mg (51%), (method B) 164 mg (97%), mp 105–113 °C, Rf = 0.57 (system e). 1H NMR (DMSO-d6, 500 MHz): δ 4.68–4.71 (m, 1H, C5′H(Rib)), 4.79–4.82 (m, 1H, C5′H(Rib)), 4.90 (ddd, 1H, J1 = 4.25 Hz, J2 = 9.65 Hz, C4′H(Rib)), 6.24 (dd, 1H, J1 = 6.05 Hz, J2 = 10.95 Hz, C3′H(Rib)), 6.37 (dd, 1H, J1 = 5.15 Hz, J2 = 10.55 Hz, C2′H(Rib)), 6.60 (d, 1H, J = 4.30 Hz, C1′H(Rib)), 7.12 (t, 1H, J = 7.20 Hz, Ph), 7.37 (t, 2H, J = 7.15 Hz, Ph), 7.45–7.48 (m, 6H, Bz), 7.61–7.67 (m, 3H, Bz), 7.83 (d, 2H, J = 7.65 Hz, Ph), 7.91–7.96 (m, 6H, Bz), 8.58 (s, 1H, C8H), 10.39 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 63.4 (CH(Rib)), 67.1 (CH(Rib)), 70.9 (CH(Rib)), 75.05 (CH(Rib)), 79.7 (CH(Rib)), 119.2 (CH(Ph)), 121.4 (CH(Ph)), 123.6 (CH(Ph)), 128.4 (CH(Bz)), 128.5 (CH(Ph)), 128.6 (CH(Bz)), 128.7 (CH(Bz)), 129.2 (CH(Bz)), 129.3 (CH(Bz)), 129.5 (CH(Bz)), 129.7 (CH(Bz)), 133.5 (C(Bz)), 133.9 (C(Bz)), 134.6 (C(Bz)), 141.4 (C), 152.2 (C), 152.5 (C), 163.7 (CO(Bz)), 164.4 (CO(Bz)), 165.3 (CO(Bz)) ppm. IR (KBr): 3338 (w, b), 3061 (bw), 1728 (s), 1623 (s), 1581 (s), 1498 (s), 1452 (s), 1316 (s), 1268 (s), 1178 (m), 1121 (s), 1094 (s), 1026 (m), 941 (w), 710 (s) cm−1. Anal. Cald for C37H28ClN5O7: C 64.40; H 4.09; N 10.15. Found: C 64.56; H 4.18; N 10.09.
(1-Adamantyl){4-[(2-chloro-9-(2,3,5-tri-O-benzoyl-β-d-ribofuranos-1-yl)-9H-purin-6-yl)amino]phenyl}methanone (14)
Prepared using “method B” from compound 8 (92 mg, 0.72 mmol), N,O-bis(trimethylsilyl)acetamide (1.44 mmol), 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.79 mmol), and trimethylsilyl trifluoromethanesulfonate (0.72 mmol). Purified using column chromatography (system a). Colorless crystalline powder, yield 171 mg (89%), mp 117–124 °C, Rf = 0.54 (system a). 1H NMR (DMSO-d6, 500 MHz): δ 1.69–1.75 (m, 6H, CH2(Ad)), 1.96–1.98 (m, 6H, CH2(Ad)), 2.03 (m, 3H, CH(Ad)), 4.6–4.71 (m, 1H, C5′H(Rib)), 4.80–4.83 (m, 1H, C5′H(Rib)), 4.90 (ddd, 1H, J1 = 4.85 Hz, J2 = 9.45 Hz, C4′H(Rib)), 6.24 (dd, 1H, J1 = 5.95 Hz, J2 = 11.50 Hz, C3′H(Rib)), 6.37 (dd, 1H, J1 = 4.60 Hz, J2 = 5.95 Hz, C2′H(Rib)), 6.61 (d, 1H, J = 4.40 Hz, C1′H(Rib)), 7.45–7.49 (m, 6H, Bz), 7.63–7.69 (m, 3H, Bz), 7.75 (d, 2H, J = 8.85 Hz, Ph), 7.92 (d, 2H, J = 7.20 Hz, Ph), 7.94–7.96 (m, 6H, Bz), 8.63 (s, 1H, C8H), 10.65 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.6 (CH2(Ad)), 35.9 (CH(Ad)), 38.7 (CH2(Ad)), 46.0 (C(Ad)), 63.3 (CH(Rib)), 70.7 (CH(Rib)), 73.5 (CH(Rib)), 79.4 (CH(Rib)), 86.3 (CH(Rib)), 119.6 (CH(Ph)), 120.0 (CH(Ph)), 128.3 (CH(Ph)), 128.6 (CH(Bz)), 128.7 (CH(Bz)), 128.7 (CH(Bz)), 129.2 (CH(Bz)), 129.3 (CH(Bz)), 129.4 (CH(Bz)), 132.9 (C(Ph)), 133.8 (C(Bz)), 133.9 (C(Bz)), 141.0 (C), 141.5 (C), 150.4 (C), 152.2 (C), 152.6 (C), 164.5 (CO(Bz)), 164.6 (CO(Bz)), 165.4 (CO(Bz)), 206.4 (PhCOAd) ppm. IR (KBr): 2905 (s), 2851 (s), 1729 (s), 1604 (m), 1574 (s), 1506 (w), 1452 (m), 1317 (m), 1270 (s), 1176 (m), 1120 (m), 1094 (m), 1026 (m), 987 (w), 711 (s) cm−1. Anal. Cald for C48H42ClN5O8: C 67.64; H 4.97; N 8.22. Found: C 67.33; H 5.02; N 8.45.
(1-Adamantyl){3-[(2-chloro-9-(2,3,5-tri-O-benzoyl-β-d-ribofuranos-1-yl)-9H-purin-6-yl)amino]phenyl}methanone (15)
Prepared using “method B” from compound 9 (60 mg, 0.41 mmol), N,O-bis(trimethylsilyl)acetamide (0.82 mmol), 1-O-2,3,5-tri-O-benzoyl-β-d-ribofuranose (0.45 mmol), and trimethylsilyl trifluoromethanesulfonate (0.41 mmol). Purified using column chromatography (system g). Colorless crystalline powder, yield 101 mg (81%), mp 95–106 °C, Rf = 0.40 (system g). 1H NMR (DMSO-d6, 500 MHz): δ 1.68–1.70 (m, 6H, CH2(Ad)), 1.98 (m, 6H, CH2(Ad)), 2.02 (m, 3H, CH(Ad)), 3.67–3.71 (m, 1H, C5′H(Rib)), 3.79–3.82 (m, 1H, C5′H(Rib)), 4.90 (ddd, 1H, J1 = 4.90 Hz, J2 = 9.45 Hz, C4′H(Rib)), 6.24 (dd, 1H, J1 = 5.80 Hz, J2 = 11.90 Hz, C3′H(Rib)), 6.37 (dd, 1H, J1 = 4.60 Hz, J2 = 5.80 Hz, C2′H(Rib)), 6.61 (d, 1H, J = 4.30 Hz, C1′H(Rib)), 7.24 (d, 1H, J = 7.65 Hz, Ph), 7.44 (t, 1H, J = 8.25 Hz, Ph), 7.45–7.49 (m, 6H, Bz), 7.60–7.67 (m, 3H, Bz), 7.90 (d, 1H, J = 10.7 Hz, Ph), 7.91 (m, 6H, Bz), 8.32 (s, 1H, Ph), 8.62 (s, 1H, C8H), 10.62 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.6 (CH2(Ad)), 35.9 (CH(Ad)), 38.5 (CH2(Ad)), 46.2 (C(Ad)), 63.3 (CH(Rib)), 70.7 (CH(Rib)), 73.7 (CH(Rib)), 79.4 (CH(Rib)), 86.3 (CH(Rib)), 119.5 (CH(Ph)), 119.8 (CH(Ph)), 123.1 (CH(Ph)), 128.4 (CH(Ph)), 128.5 (CH(Ph)), 128.6 (CH(Bz)), 128.7 (CH(Bz)), 128.8 (CH(Bz)), 129.0 (CH(Bz)), 129.2 (CH(Bz)), 129.4 (CH(Bz)), 133.5 (C(Bz)), 133.9 (C(Bz)), 134.0 (C(Bz)), 138.0 (C(Ph)), 138.8 (C(Ph)), 141.4 (C), 152.5 (C), 152.7 (C), 164.5 (CO(Bz)), 164.6 (CO(Bz)), 165.4 (CO(Bz)), 208.2 (PhCOAd) ppm. IR (KBr): 2905 (s), 2851 (m), 1728 (s), 1669 (m), 1623 (s), 1575 (s), 1452 (s), 1316 (s), 1270 (s), 1177 (m), 1121 (s), 1094 (s), 1070 (s), 788 (w), 711 (s) cm−1. Anal. Cald for C48H42ClN5O8: C 67.64; H 4.97; N 8.22. Found: C 67.33; H 5.08; N 8.49.

3.5. General Procedure for the Deprotection of Purines 1015

Sodium methoxide (1 M solution, 0.2 equiv.) was added into the mixture of the corresponding purine (0.17–0.42 mmol) in methanol (10 cm3). The reaction mixture was vigorously stirred at room temperature till the TLC indicated the consumption of all starting material (14–18 h). After this, the solvent was removed by evaporation in a vacuum. The desired compound was obtained after purification of the crude product using column chromatography.
N-phenyl-9-β-d-ribofuranos-1-yl-9H-purin-6-amine (16)
Prepared from compound 10 (230 mg, 0.30 mmol), 1 M sodium methoxide (0.06 mmol). Purified using column chromatography (system f). Colorless crystalline powder, yield 82 mg (77%), mp 196–198 °C, Rf = 0.40 (system f). 1H NMR (DMSO-d6, 500 MHz): δ 3.58–3.62 (m, 1H, C5‘H(Rib)), 3.69–3.74 (m, 1H, C5‘H(Rib)), 4.00 (ddd, 1H, J1 = 3.14 Hz, J2 = 6.65 Hz, C4′H(Rib)), 4.20 (dd, 1H, J1 = 4.35 Hz, J2 = 7.86 Hz, C3′H(Rib)), 4.66 (dd, 1H, J1 = 5.65 Hz, J2 = 10.79 Hz, C2′H(Rib)), 5.22 (d, 1H, J = 3.85 Hz, C3′HOH(Rib)), 5.30 (dd, 1H, J1 = 4.55 Hz, J2 = 10.10 Hz, C5′H2OH(Rib)), 5.49 (d, 1H, J = 6.10 Hz, C2′HOH(Rib)), 5.98 (d, 1H, J = 5.75 Hz, C1′H(Rib)), 7.06 (t, J = 7.30 Hz, 1H, Ph), 7.34 (t, J = 7.65 Hz, 2H, Ph), 7.94 (d, J = 7.95 Hz, 2H, Ph), 8.41 (s, 1H, C2H), 8.53 (s, 1H, C8H), 9.91 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 61.6 (CH(Rib)), 70.6 (CH(Rib)), 73.7 (CH(Rib)), 85.9 (CH(Rib)), 87.9 (CH(Rib)), 120.4 (CH(Ph)), 120.9 (CH(Ph)), 122.8 (CH(Ph)), 128.4 (CH(Ph)), 139.5 (C(Ph)), 140.7 (C), 149.4 (C), 151.9 (C), 152.2 (C) ppm. IR (KBr): 3334 (bm), 2922 (m), 1627 (s), 1588 (s), 1499 (s), 1480 (s), 1441 (m), 1376 (m), 1234 (m), 1099 (m), 791 (w), 749 (m), 691 (m), 669 (m), 638 (m) cm−1. ESI-MS (pos.) m/z (%): 366.0 [M + Na+]+ (9), 344.1 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 685.1 [2·M − H+] (95), 341.9 [M − H+] (100). Anal. Cald for C16H17N5O4: C 55.97; H 4.99; N 20.40. Found: C 55.73; H 5.02; N 20.38.
(1-Adamantyl){4-[(9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanone (17)
Prepared from compound 11 (140 mg, 0.17 mmol), 1 M sodium methoxide (0.03 mmol). Purified using column chromatography (system c). Colorless crystalline powder, yield 80 mg (92%), mp 145–155 °C, Rf = 0.28 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.69–1.75 (m, 6H, CH2(Ad)), 1.98–1.99 (m, 6H, CH2(Ad)), 2.03 (m, 3H, CH(Ad)), 3.56–3.61 (m, 1H, C5′H(Rib)), 3.69–3.73 (m, 1H, C5′H(Rib)), 3.99 (ddd, 1H, J1 = 3.65 Hz, J2 = 7.10 Hz, C4′H(Rib)), 4.19 (ddd, 1H, J1 = 4.80 Hz, J2 = 8.15 Hz, C3′H(Rib)), 4.65 (dd, 1H, J1 = 5.95 Hz, J2 = 11.05 Hz, C2′H(Rib)), 5.23 (d, 1H, J = 4.80 Hz, C3′HOH(Rib)), 5.27 (dd, 1H, J1 = 4.90 Hz, J2 = 6.65 Hz, C5′H2OH(Rib)), 5.52 (d, 1H, J = 6.15 Hz, C2′HOH(Rib)), 5.98 (d, 1H, J = 6.00 Hz, C1′H(Rib)), 7.77 (d, 2H, J = 8.90 Hz, Ph), 8.09 (d, 2H, J = 8.90 Hz, Ph), 8.48 (s, 1H, C2H), 8.61 (s, 1H, C8H), 10.30 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.7 (CH2(Ad)), 36.0 (CH(Ad)), 38.8 (CH2(Ad)), 46.0 (C(Ad)), 61.5 (CH(Rib)), 70.5 (CH(Rib)), 73.7 (CH(Rib)), 85.9 (CH(Rib)), 87.9 (CH(Rib)), 119.4 (CH(Ph)), 120.7 (CH(Ph)), 128.9 (CH(Ph)), 131.7 (CH(Ph)), 141.2 (C(Ph)), 142.3 (C), 149.7 (C), 151.9 (C), 152.2 (C), 206.1 (PhCOAd) ppm. IR (KBr): 3397 (s, b), 2905 (s), 2851 (s), 1628 (s), 1606 (s), 1581 (s), 1474 (s), 1414 (m), 1370 (m), 1272 (m), 1238 (s), 1175 (m), 1083 (m), 987 (w), 750 (m) cm−1. ESI-MS (pos.) m/z (%): 528.2 [M + Na+]+ (8), 506.2 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 1045.3 [2·M + Cl] (8), 1009.4 [2·M − H+] (12), 540.1 [M + Cl] (37), 504.2 [M − H+] (100). Anal. Cald for C27H31N5O5: C 64.14; H 6.18; N 13.85. Found: C 64.15; H 6.33; N 13.54.
(1-Adamantyl){3-[(9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanone (18)
Prepared from compound 12 (144 mg, 0.18 mmol), 1 M sodium methoxide (0.04 mmol). Purified using column chromatography (system c). Colorless crystalline powder, yield 84 mg (94%), mp 120–130 °C, Rf = 0.34 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.71–1.72 (m, 6H, CH2(Ad)), 1.98–1.99 (m, 6H, CH2(Ad)), 2.04 (m, 3H, CH(Ad)), 3.56–3.61 (m, 1H, C5′H(Rib)), 3.68–3.73 (m, 1H, C5′H(Rib)), 3.99 (ddd, 1H, J1 = 3.65 Hz, J2 = 7.35 Hz, C4′H(Rib)), 4.18 (dd, 1H, J1 = 3.35 Hz, J2 = 4.55 Hz, C3′H(Rib)), 4.64 (dd, 1H, J1 = 6.15 Hz, J2 = 11.35 Hz, C2′H(Rib)), 5.24 (d, 1H, J = 4.90 Hz, C3′HOH(Rib)), 5.28 (dd, 1H, J1 = 4.90 Hz, J2 = 6.70 Hz, C5′H2OH(Rib)), 5.51 (d, 1H, J = 6.10 Hz, C2′HOH(Rib)), 5.98 (d, 1H, J = 6.10 Hz, C1′H(Rib)), 7.22 (d, 1H, J = 7.65 Hz, Ph), 7.41 (t, 1H, J = 7.95 Hz, Ph), 8.15 (d, 1H, J = 8.25 Hz, Ph), 8.36 (s, 1H, Ph), 8.43 (s, 1H, C2H), 8.59 (s, 1H, C8H), 10.19 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 28.1 (CH2(Ad)), 36.5 (CH(Ad)), 39.1 (CH2(Ad)), 46.7 (C(Ad)), 62.0 (CH(Rib)), 71.0 (CH(Rib)), 74.2 (CH(Rib)), 86.4 (CH(Rib)), 88.3 (CH(Rib)), 119.8 (CH(Ph)), 121.1 (CH(Ph)), 122.0 (CH(Ph)), 123.0 (CH(Ph)), 128.9 (C(Ph)), 139.2 (C(Ph)), 139.7 (C), 141.4 (C), 150.0 (C), 152.3 (C), 152.5 (C), 208.7 (PhCOAd) ppm. IR (KBr): 3347 (bs), 2906 (s), 2851 (m), 1625 (s), 1602 (s), 1577 (s), 1478 (s), 1432 (m), 1372 (m), 1331 (m), 1296 (m), 1227 (m), 1084 (m), 998 (m), 755 (m) cm−1. ESI-MS (pos.) m/z (%): 528.2 [M + Na+]+ (5), 506.2 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 1045.3 [2·M + Cl] (6), 1009.3 [2·M − H+] (11), 540.1 [M + Cl] (22), 504.1 [M − H+] (100). Anal. Cald for C27H31N5O5: C 64.14; H 6.18; N 13.85. Found: C 64.03; H 6.47; N 13.74.
N-phenyl-2-chloro-9-β-d-ribofuranos-1-yl-9H-purin-6-amine (19)
Prepared from compound 13 (289 mg, 0.42 mmol), 1 M sodium methoxide (0.08 mmol). Purified using column chromatography (system i). Colorless crystalline powder, yield 151 mg (95%), mp 160–162 °C, Rf = 0.42 (system i). 1H NMR (DMSO-d6, 500 MHz): δ 3.57–3.60 (m, 1H, C5‘H(Rib)), 3.68–3.71 (m, 1H, C5‘H(Rib)), 3.98 (ddd, 1H, J1 = 3.55 Hz, J2 = 7.20 Hz, C4′H(Rib)), 4.17 (dd, 1H, J1 = 4.00 Hz, J2 = 8.25 Hz, C3′H(Rib)), 4.56 (dd, 1H, J1 = 5.35 Hz, J2 = 10.65 Hz, C2‘H(Rib)), 5.08 (d, 1H, J = 1.70 Hz, C3′HOH(Rib)), 5.37 (m, 1H, C5′H2OH(Rib)) 5.47 (d, 1H, J = 4.60 Hz, C2′HOH(Rib)), 5.90 (d, 1H, J = 5.80 Hz, C1′H(Rib)), 7.10 (t, J = 7.30 Hz, 1H, Ph), 7.36 (t, J = 7.60 Hz, 2H, Ph), 7.83 (d, J = 7.95 Hz, 2H, Ph), 8.56 (s, 1H, C8H), 10.34 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 61.3 (CH(Rib)), 70.3 (CH(Rib)), 73.8 (CH(Rib)), 85.7 (CH(Rib)), 87.5 (CH(Rib)), 119.2 (CH(Ph)), 121.4 (CH(Ph)), 123.6 (CH(Ph)), 128.5 (CH(Ph)), 138.7 (C(Ph)), 140.7 (C), 150.5 (C), 152.5 (C) ppm. IR (KBr): 3336 (bm), 2926 (m), 1627 (s), 1584 (s), 1498 (s), 1458 (m), 1351 (m), 1318 (s), 1233 (m), 1121 (m), 1082 (m), 1048 (m), 749 (m), 691 (m), 631 (m) cm−1. ESI-MS (pos.) m/z (%): 416.0 [M(35Cl) + K+]+ (21), 400.0 [M(35Cl) + Na+]+ (100), 378.1 [M(35Cl) + H+]+ (92). ESI-MS (neg.) m/z (%): 753.0 [2·M(35Cl) − H+] (27), 411.9 [M(35Cl) + Cl] (54), 375.9 [M(35Cl) − H+] (100). Anal. Cald for C16H16ClN5O4: C 50.87; H 4.27; N 18.54. Found: C 51.14; H 4.06; N 18.93.
(1-Adamantyl){4-[(2-chloro-9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanone (20)
Prepared from compound 14 (260 mg, 0.30 mmol), 1 M sodium methoxide (0.06 mmol). Purified using column chromatography (system c). Colorless crystalline powder, yield 149 mg (91%), mp 130–138 °C, Rf = 0.34 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.70–1.76 (m, 6H, CH2(Ad)), 1.98 (m, 6H, CH2(Ad)), 2.03 (m, 3H, CH(Ad)), 3.56–3.61 (m, 1H, C5′H(Rib)), 3.67–3.71 (m, 1H, C5′H(Rib)), 3.99 (ddd, 1H, J1 = 3.85 Hz, J2 = 7.65 Hz, C4′H(Rib)), 4.17 (dd, 1H, J1 = 4.90 Hz, J2 = 8.55 Hz, C3′H(Rib)), 4.56 (dd, 1H, J1 = 5.65 Hz, J2 = 10.80 Hz, C2′H(Rib)), 5.04 (dd, 1H, J1 = 5.65 Hz, J2 = 11.1 Hz, C5′H2OH(Rib)), 5.21 (d, 1H, J = 5,05 Hz, C3′HOH(Rib)), 5.51 (d, 1H, J = 4.45 Hz, C2′HOH(Rib)), 5.92 (d, 1H, J = 5.20 Hz, C1′H(Rib)), 7.75 (d, 2H, J = 7.60 Hz, Ph), 7.96 (d, 2H, J = 7.65 Hz, Ph), 8.61 (s, 1H, C8H), 10.61 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.6 (CH2(Ad)), 36.0 (CH(Ad)), 38.7 (CH2(Ad)), 46.0 (C(Ad)), 61.2 (CH(Rib)), 70.2 (CH(Rib)), 73.8 (CH(Rib)), 85.7 (CH(Rib)), 87.5 (CH(Rib)), 119.5 (CH(Ph)), 119.9 (CH(Ph)), 128.6 (CH(Ph)), 132.8 (C(Ph)), 141.2 (C), 150.8 (C), 152.1 (C), 152.2 (C), 206.5 (PhCOAd) ppm. IR (KBr): 3349 (bs), 2906 (s), 2851 (s), 1629 (s), 1606 (s), 1574 (s), 1508 (m), 1459 (s), 1321 (m), 1237 (m), 1175 (m), 1125 (m), 1084 (m), 987 (w), 750 (m) cm−1. ESI-MS (pos.) m/z (%): 1101.4 [2·M(35Cl) + Na+]+ (13), 578.2 [M(35Cl) + K+]+ (49), 562.2 [M(35Cl) + Na+]+ (100), 540.2 [M(35Cl) + H+]+ (72). ESI-MS (neg.) m/z (%): 574.0 [M(35Cl)+Cl] (42), 538.1 [M(35Cl) − H+] (80), 406.0 [M(35Cl) − H+ − C5H8O4] (100). Anal. Cald for C27H30ClN5O5: C 60.05; H 5.60; N 12.97. Found: C 59.86; H 5.81; N 12.72.
(1-Adamantyl){3-[(2-chloro-9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanone (21)
Prepared from compound 15 (282 mg, 0.33 mmol), 1 M sodium methoxide (0.07 mmol). Purified using column chromatography (system c). Colorless crystalline powder, yield 155 mg (87%), mp 144–151 °C, Rf = 0.36 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.69–1.74 (m, 6H, CH2(Ad)), 1.99 (m, 6H, CH2(Ad)), 2.04 (m, 3H, CH(Ad)), 3.57–3.61 (m, 1H, C5′H(Rib)), 3.67–3.72 (m, 1H, C5′H(Rib)), 3.98 (ddd, 1H, J1 = 3.85 Hz, J2 = 7.50 Hz, C4′H(Rib)), 4.17 (dd, 1H, J1 = 4.55 Hz, J2 = 8.55 Hz, C3′H(Rib)), 4.56 (dd, 1H, J1 = 5.50 Hz, J2 = 10.95 Hz, C2′H(Rib)), 5.04 (dd, 1H, J1 = 5.65 Hz, J2 = 11.15 Hz, C5′H2OH(Rib)), 5.21 (d, 1H, J = 5.05 Hz, C3′HOH(Rib)), 5.50 (d, 1H, J = 6.10 Hz, C2′HOH(Rib)), 5.91 (d, 1H, J = 5.80 Hz, C1′H(Rib)), 7.23 (d, 1H, J = 7.80 Hz, Ph), 7.44 (t, 1H, J = 7.93 Hz, Ph), 7.91 (d, 1H, J = 8.40 Hz, Ph), 8.32 (s, 1H, Ph), 8.59 (s, 1H, C8H), 10.54 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.5 (CH2(Ad)), 35.9 (CH(Ad)), 38.5 (CH2(Ad)), 46.1 (C(Ad)), 61.2 (CH(Rib)), 70.3 (CH(Rib)), 73.8 (CH(Rib)), 85.7 (CH(Rib)), 87.5 (CH(Rib)), 119.3 (CH(Ph)), 119.6 (CH(Ph)), 122.4 (CH(Ph)), 122.9 (CH(Ph)), 128.6 (C(Ph)), 138.0 (C(Ph)), 138.8 (C), 141.0 (C), 150.6 (C), 152.3 (C), 208.2 (PhCOAd) ppm. IR (KBr): 3355 (bs), 2906 (s), 2852 (m), 1626 (s), 1601 (s), 1574 (s), 1454 (m), 1319 (s), 1273 (m), 1227 (m), 1174 (w), 1120 (m), 1084 (m), 1051 (m), 754 (m) cm−1. ESI-MS (pos.) m/z (%): 578.2 [M(35Cl) + K+]+ (10), 562.2 [M(35Cl) + Na+]+ (27), 540.2 [M(35Cl) + H+]+ (100). ESI-MS (neg.) m/z (%): 1077.2 [2·M(35Cl) − H+] (12), 574.1 [M(35Cl) + Cl] (10), 538.1 [M(35Cl) − H+] (100). Anal. Cald for C27H30ClN5O5: C 60.05; H 5.60; N 12.97. Found: C 60.03; H 5.66; N 12.85.

3.6. General Procedure for the Reduction of Compounds 17, 18, 20, and 21 with NaBH4

Reduction of compounds 17, 18, 20, and 21 was performed according to a slightly modified version of a previously published procedure [39]. The corresponding ketone (0.12–0.17 mmol) was dissolved in ethanol (5 cm3) and the mixture was cooled in an ice bath. After this, sodium borohydride (1.23 equiv.) was added into the mixture in one portion at 0 °C. The reaction mixture was vigorously stirred at room temperature till the TLC indicated the consumption of all starting material (24 h). After this, the reaction was quenched by the addition of 1 M HCl (6 cm3) and the formation of a colorless precipitation was observed. The precipitate was filtrated with suction and the solid material was washed several times with distilled water. The desired compound was obtained after purification of the crude product using column chromatography.
(1-Adamantyl){4-[(9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanol (22)
Prepared from compound 17 (61 mg, 0.12 mmol), sodium borohydride (0.15 mmol). Purified using column chromatography (system b). Colorless crystalline powder, yield 51 mg (82%), mp 145–156 °C, Rf = 0.43 (system b). 1H NMR (DMSO-d6, 500 MHz): δ 1.40–1.42 (m, 3H, CH2(Ad)), 1.51–1.53 (m, 3H, CH2(Ad)), 1.59–1.63 (m, 6H, CH2(Ad)), 1.91 (m, 3H, CH(Ad)), 3.56–3.60 (m, 1H, C5′H(Rib)), 3.68–3.72 (m, 1H, C5′H(Rib)), 3.99 (ddd, 1H, J1 = 3.44 Hz, J2 = 6.79 Hz, C4′H(Rib)), 4.02 (d, 1H, J = 3.81 Hz, PhCHOHAd), 4.18 (dd, 1H, J1 = 4.43 Hz, J2 = 8.09 Hz, C3′H(Rib)), 4.64 (dd, 1H, J1 = 5.65 Hz, J2 = 11.29 Hz, C2′H(Rib)), 4.93 (d, 1H, J = 4.12 Hz, PhCHOHAd)), 5.18 (d, 1H, J = 4.58 Hz, C3′HOH(Rib)), 5.27 (dd, 1H, J1 = 5.49 Hz, J2 = 10.99 Hz, C5′H2OH(Rib)), 5.45 (d, 1H, J = 6.10 Hz, C2′HOH(Rib)), 5.96 (d, 1H, J = 5.95 Hz, C1′H(Rib)), 7.17 (d, 2H, J = 8.39 Hz, Ph), 7.82 (d, 2H, J = 8.39 Hz, Ph), 8.38 (s, 1H, C2H), 8.52 (s, 1H, C8H), 9.86 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.8 (CH2(Ad)), 36.7 (CH(Ad)), 36.8 (CH2(Ad)), 37.9 (C(Ad)), 61.5 (CH(Rib)), 70.5 (CH(Rib)), 73.6 (CH(Rib)), 80.5 (PhCHOHAd), 85.8 (CH(Rib)), 87.8 (CH(Rib)), 119.9 (CH(Ph)), 120.3 (CH(Ph)), 127.7 (CH(Ph)), 136.9 (C(Ph)), 137.8 (C(Ph)), 140.5 (C), 149.2 (C), 151.9 (C), 152.2 (C) ppm. IR (KBr): 3354 (bs), 2904 (s), 2848 (s), 1627 (s), 1586 (s), 1511 (s), 1478 (s), 1420 (m), 1374 (m), 1296 (m), 1234 (m), 1125 (m), 1084 (m), 1029 (m), 742 (m) cm−1. ESI-MS (pos.) m/z (%): 508.3 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 1013.4 [2·M − H+] (16), 542.1 [M + Cl] (21), 506.2 [M − H+] (100). Anal. Cald for C27H33N5O5: C 63.89; H 6.55; N 13.80. Found: C 63.63; H 6.36; N 13.91.
(1-Adamantyl){3-[(9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanol (23)
Prepared from compound 18 (59 mg, 0.12 mmol), sodium borohydride (0.15 mmol). Purified using column chromatography (system b). Colorless crystalline powder, yield 53 mg (90%), mp 130–145 °C, Rf = 0.52 (system b). 1H NMR (DMSO-d6, 500 MHz): δ 1.42–1.45 (m, 3H, CH2(Ad)), 1.51–1.53 (m, 3H, CH2(Ad)), 1.61–1.64 (m, 6H, CH2(Ad)), 1.91 (m, 3H, CH(Ad)), 3.56–3.60 (m, 1H, C5′H(Rib)), 3.68–3.72 (m, 1H, C5′H(Rib)), 3.98 (ddd, 1H, J1 = 3.51 Hz, J2 = 7.02 Hz, C4′H(Rib)), 4.02 (d, 1H, J = 3.97 Hz, PhCHOHAd), 4.18 (dd, 1H, J1 = 4.58 Hz, J2 = 8.09 Hz, C3′H(Rib)), 4.64 (dd, 1H, J1 = 5.95 Hz, J2 = 11.29 Hz, C2′H(Rib)), 5.00 (d, 1H, J = 3.97 Hz, PhCHOHAd), 5.18 (d, 1H, J = 4.73 Hz, C3′HOH(Rib)), 5.26 (dd, 1H, J1 = 4.88 Hz, J2 = 6.56 Hz, C5′H2OH(Rib)), 5.46 (d, 1H, J = 6.10 Hz, C2′HOH(Rib)), 5.96 (d, 1H, J = 5.95 Hz, C1′H(Rib)), 6.93 (d, 1H, J = 7.63 Hz, Ph), 7.23 (t, 1H, J = 7.78 Hz, Ph), 7.70 (s, 1H, Ph), 7.84 (d, 1H, J = 9.00 Hz, Ph), 8.36 (s, 1H, C2H), 8.52 (s, 1H, C8H), 9.86 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 28.3 (CH2(Ad)), 37.2 (CH(Ad)), 37.3 (CH2(Ad)), 38.5 (C(Ad)), 62.0 (CH(Rib)), 71.0 (CH(Rib)), 74.1 (CH(Rib)), 81.5 (PhCHOHAd), 86.3 (CH(Rib)), 88.3 (CH(Rib)), 119.9 (CH(Ph)), 120.8 (CH(Ph)), 121.5 (CH(Ph)), 123.1 (CH(Ph)), 127.3 (C(Ph)), 138.7 (C(Ph)), 141.0 (C), 143.4 (C), 149.8 (C), 152.3 (C), 152.7 (C) ppm. IR (KBr): 3330 (bs), 2904 (s), 2846 (m), 1628 (s), 1581 (s), 1477 (s), 1375 (m), 1304 (m), 1225 (m), 1111 (m), 1084 (m), 1043 (m), 795 (m), 731 (m), 644 (m) cm−1. ESI-MS (pos.) m/z (%): 546.2 [M + K+]+ (13), 530.3 [M + Na+]+ (16), 508.3 [M + H+]+ (100). ESI-MS (neg.) m/z (%): 1049.3 [2·M + Cl] (7), 1013.4 [2·M − H+] (6), 542.1 [M + Cl] (71), 506.2 [M − H+] (100). Anal. Cald for C27H33N5O5: C 63.89; H 6.55; N 13.80. Found: C 63.33; H 6.74; N 14.05.
(1-Adamantyl){4-[(2-chloro-9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanol (24)
Prepared from compound 20 (92 mg, 0.17 mmol), sodium borohydride (0.21 mmol). Purified using column chromatography (system c). Colorless crystalline powder, yield 79 mg (86%), mp 138–142 °C, Rf = 0.28 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.40–1.43 (m, 3H, CH2(Ad)), 1.51–1.53 (m, 3H, CH2(Ad)), 1.59–1.63 (m, 6H, CH2(Ad)), 1.91 (m, 3H, CH(Ad)), 3.57–3.59 (m, 1H, C5′H(Rib)), 3.67–3.70 (m, 1H, C5′H(Rib)), 3.97 (ddd, 1H, J1 = 3.66 Hz, J2 = 7.32 Hz, C4′H(Rib)), 4.03 (d, 1H, J = 3.05 Hz, PhCHOHAd), 4.16 (dd, 1H, J1 = 3.81 Hz, J2 = 7.93 Hz, C3′H(Rib)), 4.55 (dd, 1H, J1 = 5.19 Hz, J2 = 10.68 Hz, C2′H (Rib)), 4.96 (d, 1H, J = 3.81 Hz, PhCHOHAd)), 5.04 (d, 1H, C3′HOH(Rib)), 5.22 (dd, 1H, C5′H2OH(Rib)) 5.51 (d, 1H, C2′HOH(Rib)), 5.89 (d, 1H, J = 5.80 Hz, C1′H(Rib)), 7.20 (d, 2H, J = 8.39 Hz, Ph), 7.73 (d, 2H, J = 8.39 Hz, Ph), 8.54 (s, 1H, C8H), 10.29 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 28.3 (CH2(Ad)), 37.2 (CH(Ad)), 37.3 (CH2(Ad)), 38.4 (C(Ad)), 61.8 (CH(Rib)), 70.8 (CH(Rib)), 74.3 (CH(Rib)), 80.9 (PhCHOHAd), 86.2 (CH(Rib)), 87.9 (CH(Rib)), 119.6 (CH(Ph)), 120.6 (CH(Ph)), 128.3 (CH(Ph)), 137.5 (C(Ph)), 138.4 (C), 141.2 (C), 151.0 (C), 152.9 (C), 153.0 (C) ppm. IR (KBr): 3387 (bs), 2905 (s), 2848 (s), 1626 (s), 1582 (s), 1511 (m), 1465 (m), 1348 (m), 1317 (s), 1233 (m), 1122 (m), 1084 (m), 1048 (m), 756 (w), 632 (m) cm−1. ESI-MS (pos.) m/z (%): 580.2 [M(35Cl) + K+]+ (19), 564.2 [M(35Cl) + Na+]+ (100), 542.2 [M(35Cl) + H+]+ (90). ESI-MS (neg.) m/z (%): 1117.2 [2·M(35Cl) − Cl] (12), 1081.2 [2·M(35Cl) − H+] (7), 576.2 [M(35Cl) + Cl] (100), 540.1 [M(35Cl) − H+] (84). Anal. Cald for C27H32ClN5O5: C 59.83; H 5.95; N 12.92. Found: C 59.45; H 5.61; N 12.54.
(1-Adamantyl){3-[(2-chloro-9-β-d-ribofuranos-1-yl-9H-purin-6-yl)amino]phenyl}methanol (25)
Prepared from compound 21 (90 mg, 0.17 mmol), sodium borohydride (0.21 mmol). Purified using column chromatography (system c). Colorless crystalline powder, yield 73 mg (80%), mp 170–174 °C, Rf = 0.22 (system c). 1H NMR (DMSO-d6, 500 MHz): δ 1.44–1.46 (m, 3H, CH2(Ad)), 1.52–1.54 (m, 3H, CH2(Ad)), 1.61–1.66 (m, 6H, CH2(Ad)), 1.92 (m, 3H, CH(Ad)), 3.55–3.60 (m, 1H, C5′H(Rib)), 3.66–3.70 (m, 1H, C5′H(Rib)), 3.97 (ddd, 1H, J1 = 3.81 Hz, J2 = 7.48 Hz, C4′H(Rib)), 4.02 (d, 1H, J = 3.97 Hz, PhCHOHAd), 4.16 (dd, 1H, J1 = 4.73 Hz, J2 = 8.54 Hz, C3′H(Rib)), 4.54 (dd, 1H, J1 = 5.49 Hz, J2 = 10.83 Hz, C2′H(Rib)), 5.01 (d, 1H, J = 4.12 Hz, PhCHOHAd), 5.05 (d, 1H, J = 5.65 Hz, C3′H2OH(Rib)), 5.20 (dd, 1H, J = 5.04 Hz, C5′HOH(Rib)), 5.50 (d, 1H, J = 6.10 Hz, C2′HOH(Rib)), 5.89 (d, 1H, J = 5.80 Hz, C1′H(Rib)), 6.98 (d, 1H, J = 7.63 Hz, CH(Ph)), 7.26 (t, 1H, J = 7.78 Hz, Ph), 7.59 (d, 1H, J = 7.93 Hz, Ph), 7.67 (s, 1H, Ph), 8.54 (s, 1H, C8H), 10.31 (s, 1H, C6NHPh) ppm. 13C NMR (DMSO-d6, 125 MHz): δ 27.8 (CH2(Ad)), 36.7 (CH(Ad)), 36.8 (CH2(Ad)), 37.9 (C(Ad)), 61.2 (CH(Rib)), 70.3 (CH(Rib)), 73.8 (CH(Rib)), 80.9 (PhCHOHAd), 85.7 (CH(Rib)), 87.4 (CH(Rib)), 119.1 (CH(Ph)), 119.9 (CH(Ph)), 121.8 (CH(Ph)), 123.5 (CH(Ph)), 126.9 (C(Ph)), 137.2 (C(Ph)), 140.6 (C), 142.9 (C), 150.5 (C), 152.3 (C), 152.6 (C) ppm. IR (KBr): 3346 (bs), 2904 (s), 2849 (m), 1627 (s), 1578 (s), 1459 (m), 1352 (m), 1317 (m), 1222 (m), 1125 (m), 1086 (m), 1046 (m), 787 (w), 730 (m), 632 (m) cm−1. ESI-MS (pos.) m/z (%): 1121.4 [2·M(35Cl) + K+]+ (13), 1105.4 [2·M(35Cl) + Na+]+ (25), 1083.3 [2·M(35Cl) + H+]+ (7), 580.2 [M(35Cl) + K+]+ (37), 564.2 [M(35Cl) + Na+]+ (61), 542.2 [M(35Cl) + H+]+ (100). ESI-MS (neg.) m/z (%): 1081.3 [2·M(35Cl) − H+] (8), 576.1 [M(35Cl) + Cl] (22), 540.1 [M(35Cl) − H+] (100). Anal. Cald for C27H32ClN5O5: C 59.83; H 5.95; N 12.92. Found: C 59.56; H 6.25; N 12.68.

3.7. Proliferation Assay

The cell lines K562 and MV4;11 were obtained from the European Collection of Cell Cultures. The cell lines were cultivated in Dulbecco’s modified Eagle’s medium supplemented with 10% fetal bovine serum, penicillin (100 U/mL), and streptomycin (100 μg/mL) at 37 °C in 5% CO2. For the assays, cells seeded into 96 well plates (5000 cells per well) were treated in triplicate, with six different doses of each compound. After 72 h, a resazurin (Sigma-Aldrich, St. Louis, MO, USA) solution was added for four hours, and the fluorescence of resorufin formed in the live cells was measured at 544 nm/590 nm (excitation/emission) using a Fluoroskan Ascent microplate reader (Labsystems). The IC50 value, the drug concentration reducing the number of cells to 50%, was calculated from the dose–response curves.

4. Conclusions

Purine nucleosides represent one of the most important substrates in living systems, and they continue to fascinate researchers with their nearly unlimited allotropy and potential to extend their biological effects. According to a previously published study dealing with the antiproliferative activity of natural cytokinins, including topolin ribosides, we designed and prepared a novel series of 2,6-disubstituted and 2,6,9-trisubstituted purine ribonucleosides at the C6 adamantylated aromatic amines. In concert with the fact that the adamantane moiety can be immersed into the cavity of β-CD, we studied the ability of the newly prepared adamantane-based purine ribonucleosides to form host–guest complexes with β-CD. The formation of host–guest complexes with 1:1 stoichiometry was proven by the results obtained in NMR and ESI-MS experiments, respectively. Additionally, the antiproliferative activity of single purine ribonucleosides and their equimolar mixtures with β-CD against two types of tumor cell lines (MV4;11 and K562, respectively) was assayed. Most of the adamantylated purine nucleosides (except compounds 17 and 25) displayed antiproliferative activity against one or both of the tested cell lines in the micromolar range (IC50 = 12.3–23.8 μM). The highest efficacy was shown by compounds 20 and 24, respectively, with chlorine at C2 and the para-substituted aromatic ring at C6. Finally, we demonstrated that β-CD had only a slightly negative effect on the biological activity of the prepared adamantylated purine nucleosides, which was probably incurred due to competitive drug binding inside the cavity of β-CD.

Supplementary Materials

The following are available online at https://www.mdpi.com/article/10.3390/ijms232315143/s1. Figures S1–S45: 1H and 13C NMR spectra of compounds 2, 424; Table S1: Crystal data and refinement parameters of compound 13; Figure S46: crystal packing of compound 13; CIF file of compound 13.

Author Contributions

Conceptualization, R.V. and M.R.; methodology, V.K., M.N., R.V. and M.R.; investigation, J.R., V.K., M.N., R.V. and M.R.; writing and original draft preparation, J.R., R.V. and M.R.; writing, review and editing, V.K., M.N., R.V. and M.R.; visualization, J.R., R.V. and M.R.; supervision, R.V. and M.R.; project administration, R.V. and M.R.; funding acquisition, V.K., M.N., R.V. and M.R. All authors have read and agreed to the published version of the manuscript.

Funding

This work was supported by the Internal Founding Agency of Tomas Bata University in Zlín, projects no. IGA/FT2018/001 and IGA/FT/2019/007 and Czech Science Foundation (21-06553S). We acknowledge the X-ray Diffraction and Bio-SAXS Core Facility of CIISB, Instruct-CZ Centre, supported by MEYS CR (LM2018127) and European Regional Development Fund-Project “UP CIISB” (No. CZ.02.1.01./0.0/0.0/18_046/0015974).

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

Not applicable.

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Jordheim, L.P.; Durantel, D.; Zoulim, F.; Dumotet, C. Advances in the development of nucleoside and nucleotide analogues for cancer and viral diseases. Nat. Rev. Drug Discov. 2013, 12, 447–464. [Google Scholar] [CrossRef] [PubMed]
  2. Deb, P.K.; Deka, S.; Borah, P.; Abed, S.N.; Klotz, K.-N. Medicinal Chemistry and Therapeutic Potential of Agonists, Antagonists and Allosteric Modulators of A1 Adenosine Receptor: Current Status and Perspectives. Curr. Pharm. Des. 2019, 25, 2697–2715. [Google Scholar] [CrossRef] [PubMed]
  3. Matušková, V.; Zatloukal, M.; Voller, J.; Grúz, J.; Pěkná, Z.; Briestenská, K.; Mistríková, J.; Spíchal, L.; Doležal, K.; Strnad, M. New aromatic 6-substituted 2′-deoxy-9-(β)-d-ribofuranosylpurine derivatives as potential plant growth regulators. Bioorganic Med. Chem. 2020, 28, 115230. [Google Scholar] [CrossRef] [PubMed]
  4. Siegel, D.; Hui, H.C.; Doerffler, E.; Clarke, M.O.; Chun, K.; Zhang, L.; Neville, S.; Carra, E.; Lew, W.; Ross, B.; et al. Discovery and Synthesis of a Phosphoramidate Prodrug of a Pyrrolo[2,1-f][triazin-4-amino] Adenine C-Nucleoside (GS-5734) for the Treatment of Ebola and Emerging Viruses. J. Med. Chem. 2017, 60, 1648–1661. [Google Scholar] [CrossRef] [Green Version]
  5. Veselovská, L.; Kudlová, N.; Gurská, S.; Lišková, B.; Medvedíková, M.; Hodek, O.; Tloušťová, E.; Milisavljevic, N.; Tichý, M.; Perlíková, P.; et al. Synthesis and Cytotoxic and Antiviral Activity Profiling of All-Four Isomeric Series of Pyrido-Fused 7-Deazapurines Ribonucleosides. Chem. Eur. J. 2020, 26, 13002–13015. [Google Scholar] [CrossRef] [PubMed]
  6. Fleuti, M.; Bártová, K.; Poštová Slavětínská, L.; Tloušťová, E.; Tichý, M.; Gurská, S.; Pavliš, P.; Džubák, P.; Hajdúch, M.; Hocek, M. Synthesis and Biological Profiling of Pyrazolo-Fused 7-Deazapurine Nucleosides. J. Org. Chem. 2020, 85, 10539–10551. [Google Scholar] [CrossRef]
  7. Hulpia, F.; Noppen, S.; Schols, D.; Andrei, G.; Snoeck, R.; Liekens, S.; Vervaeke, P.; Van Calenbergh, S. Synthesis of 3′-C-ethynyl-β-d-ribofuranose purine nucleoside library: Discovery of C7-deazapurine analogs as potent antiproliferative nucleosides. Eur. J. Med. Chem. 2018, 157, 248–267. [Google Scholar] [CrossRef]
  8. Malthum, S.; Polkam, N.; Alaka, T.R.; Chepuri, K.; Anireddy, J.S. Synthesis, characterization and biological evaluation of purine nucleoside analogues. Tetrahedron Lett. 2017, 58, 4166–4168. [Google Scholar] [CrossRef]
  9. Nguyen, V.H.; Tichý, M.; Rožánková, S.; Pohl, R.; Downey, A.M.; Doleželová, E.; Tloušťová, E.; Slapničková, M.; Zíková, A.; Hocek, M. Synthesis and anti-trypanosomal activity of 3′-fluororibonucleosides derived from 7-deazapurine nucleosides. Bioorg. Med. Chem. Lett. 2021, 40, 127957. [Google Scholar] [CrossRef]
  10. Perlíková, P.; Krajczyk, A.; Doleželová, E.; Slapničková, M.; Milisavljevic, N.; Poštová Slavětínská, L.; Tloušťová, E.; Gurská, S.; Džubák, P.; Hajdúch, M.; et al. Synthesis and Antitrypanosomal Activity of 6-Substituted 7-Methyl-7-deazapurine Nucleosides. ACS Infect. Dis. 2021, 7, 917–926. [Google Scholar] [CrossRef]
  11. Voller, J.; Zatloukal, M.; Lenobel, R.; Doležal, K.; Béreš, T.; Kryštof, V.; Spíchal, L.; Niemann, P.; Džubák, P.; Hajdúch, M.; et al. Anticancer activity of natural cytokinins: A structure–activity relationship study. Phytochemistry 2010, 71, 1350–1359. [Google Scholar] [CrossRef] [PubMed]
  12. Bouton, J.; Maes, L.; Karalic, I.; Caljon, G.; Van Calenberg, S. Synthesis and evaluation of a collection of purine-like C-nucleosides as antikinetoplastid agents. Eur. J. Med. Chem. 2021, 212, 113101. [Google Scholar] [CrossRef] [PubMed]
  13. Shelton, J.; Lu, X.; Hollenbaugh, J.A.; Cho, J.H.; Ablard, F.; Schinazi, R.F. Metabolism, Biochemical Actions, and Chemical Synthesis of Anticancer Nucleosides, Nucleotides, and Base Analogs. Chem. Rev. 2016, 116, 14379–14455. [Google Scholar] [CrossRef]
  14. Anilkumar, R.K.; Bo, Y.; Balasubramanian, S. Recent Developments in the Synthesis of Substituted Purine Nucleosides and Nucleotides. Curr. Org. Chem. 2014, 18, 2072–2107. [Google Scholar]
  15. Foscolos, A.-S.; Papanastasiou, I.; Tsotinis, A.; Taylor, M.C.; Kelly, J.M. Synthesis and Evaluation of Nifurtimox–Adamantane Adducts with Trypanocidal Activity. ChemMedChem 2019, 14, 1227–1231. [Google Scholar] [CrossRef]
  16. Ma, J.; Li, H.; Hu, X.; Yang, L.; Chen, Q.; Hu, C.; Chen, Z.; Tian, X.; Yang, Y.; Luo, Y.; et al. CMD-05, a novel promising clinical anti-diabetic drug candidate, in vivo and vitro studies. Sci. Rep. 2017, 7, 46628. [Google Scholar] [CrossRef]
  17. Jiang, B.-E.; Hu, J.; Liu, H.; Liu, Z.; Wen, Y.; Liu, M.; Zhang, H.-K.; Pang, X.; Yu, L.-F. Design, synthesis, and biological evaluation of indole-based hydroxamic acid derivatives as histone deacetylase inhibitors. Eur. J. Med. Chem. 2022, 227, 113893. [Google Scholar] [CrossRef]
  18. Ao, M.; Hu, X.; Qian, Y.; Li, B.; Zhang, J.; Cao, Y.; Zhang, Y.; Guo, K.; Qiu, Y.; Jiang, F.; et al. Discovery of new chalone adamantyl arotinoids having RXRα-modulating and anticancer activities. Bioorg. Chem. 2021, 113, 104961. [Google Scholar] [CrossRef]
  19. Andring, J.T.; Fouch, M.; Akocak, S.; Angeli, A.; Supuran, C.T.; Ilies, M.A.; McKenna, R. Structural Basis of Nanomolar Inhibition of Tumor-Associated Carbonic Anhydrase IX: X-Ray Crystallographic and Inhibition Study of Lipophilic Inhibitors with Acetazolamide Backbone. J. Med. Chem. 2020, 63, 13064–13075. [Google Scholar] [CrossRef]
  20. Shiryaev, V.A.; Skomorohov, M.Y.; Leonova, M.V.; Bormotov, N.I.; Serova, O.A.; Shishkina, L.N.; Agafonov, A.P.; Maksyutov, R.A.; Klimochkin, Y.N. Adamantane derivatives as potential inhibitors of p37 major envelope protein and poxvirus reproduction. Design, synthesis and antiviral activity. Eur. J. Med. Chem. 2021, 221, 113485. [Google Scholar] [CrossRef]
  21. Suslov, E.V.; Mozhaytsev, E.S.; Korchagina, D.V.; Bormotov, N.I.; Yarovaya, O.I.; Vocho, K.P.; Serova, O.A.; Agafonov, A.P.; Maksyutov, R.A.; Shishkina, L.N.; et al. New chemical agents based on adamantane-monoterpene conjugates against orthopoxvirus infections. RSC Med. Chem. 2020, 11, 1185–1195. [Google Scholar] [CrossRef] [PubMed]
  22. Georgiadis, M.-O.; Kourbeli, V.; Ioannidou, V.; Karakitsios, E.; Papanastasiou, I.; Tsotinis, A.; Komiotis, D.; Vocat, A.; Cole, S.T.; Taylor, M.C.; et al. Synthesis of diphenoxyadamantane alkylamines with pharmacological interest. Bioorg. Med. Chem. Lett. 2019, 29, 1278–1281. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  23. Rodenko, B.; van der Burg, A.M.; Wanner, M.J.; Kaiser, M.; Brun, R.; Gould, M.; de Koning, H.P.; Koomen, G.-J. 2,N6-Disubstituted Adenosine Analogs with Antitrypanosomal and Antimalarial Activities. Antimicrob. Agents Chemother. 2007, 51, 3796–3802. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  24. Patel, S.R.; Gangwal, R.; Sangamwar, A.T.; Jain, R. Synthesis, biological evaluation and 3D-QSAR study of hydrazide, semicarbazide and thiosemicarbazide derivatives of 4-(adamantan-1-yl)quinoline as anti-tuberculosis agents. Eur. J. Med. Chem. 2014, 85, 255–267. [Google Scholar] [CrossRef] [PubMed]
  25. Addla, D.; Jallapally, A.; Gurram, D.; Yogeeswari, P.; Sriram, D.; Kantevari, S. Design, synthesis and evaluation of 1,2,3-triazole-adamantylacetamide hybrids as potent inhibitors of Mycobacterium tuberculosis. Bioorg. Med. Chem. Lett. 2014, 24, 1974–1979. [Google Scholar] [CrossRef]
  26. Jiang, B.-E.; Jiang, X.; Zhang, Q.; Liang, Q.; Qiu, Z.-L.; Sun, X.-B.; Yang, J.-J.; Chen, S.; Yi, C.; Chai, X.; et al. From a Designer Drug to the Discovery of Selective Cannabinoid Type 2 Receptor Agonists with Favorable Pharmacokinetics Profiles for the Treatment of Systemic Sclerosis. J. Med. Chem. 2021, 64, 385–403. [Google Scholar] [CrossRef]
  27. Shi, Y.; Duan, Y.-H.; Ji, Y.-Y.; Wang, Z.-L.; Wu, Y.-R.; Gunosewoyo, H.; Xie, X.-Y.; Chen, J.-Z.; Yang, F.; Li, J.; et al. Amidoalkylindoles as Potent and Selective Cannabinoid Type 2 Receptor Agonists with in Vivo Efficacy in a Mouse Model of Multiple Sclerosis. J. Med. Chem. 2017, 60, 7067–7083. [Google Scholar] [CrossRef]
  28. Moldovan, R.-P.; Hausmann, K.; Deuther-Conrad, W.; Brust, P. Development of Highly Affine and Selective Fluorinated Cannabinoid Type 2 Receptor Ligands. ACS Med. Chem. Lett. 2017, 8, 566–571. [Google Scholar] [CrossRef] [Green Version]
  29. Knight, A.; Hemmings, J.L.; Winfield, I.; Leuenberger, M.; Frattini, E.; Frenguelli, B.G.; Dowel, S.J.; Lochner, M.; Ladds, G. Discovery of Novel Adenosine Receptor Agonists That Exhibit Subtype Selectivity. J. Med. Chem. 2016, 59, 947–964. [Google Scholar] [CrossRef] [Green Version]
  30. Gao, Z.-G.; Blaustein, J.B.; Gross, A.S.; Melman, N.; Jacobson, K.A. N6-Substituted adenosine derivatives: Selectivity, efficacy, and species differences at A3 adenosine receptors. Biochem. Pharmacol. 2003, 65, 1675–1684. [Google Scholar] [CrossRef] [Green Version]
  31. Rouchal, M.; Rudolfová, J.; Kryštof, V.; Vojáčková, V.; Čmelík, R.; Vícha, R. Adamantane-Substituted Purines and Their β-Cyclodextrin Complexes: Synthesis and Biological Evaluation. Int. J. Mol. Sci. 2021, 22, 12675. [Google Scholar] [CrossRef] [PubMed]
  32. Singh, G.; Rani, S.; Gawri, S.; Sinha, S.; Sehgal, R. Adamantylated organosilatranes: Design, synthesis, and potential appraisal in surface modification and anti-protozoal activity. New J. Chem. 2017, 41, 11626–11639. [Google Scholar] [CrossRef]
  33. Loftsson, T.; Brewster, M.E. Pharmaceutical applications of cyclodextrins: Effects on drug permeation through biological membranes. J. Pharm. Pharmacol. 2011, 63, 1119–1135. [Google Scholar] [CrossRef] [PubMed]
  34. Tian, B.; Hua, S.; Liu, J. Cyclodextrin-based delivery systems for chemotherapeutic anticancer drugs: A review. Carbohydr. Polym. 2020, 232, 115805. [Google Scholar] [CrossRef] [PubMed]
  35. Thiabaud, G.; Harden-Bull, L.; Ghang, Y.-J.; Sen, S.; Chi, X.; Bachman, J.L.; Lych, V.M.; Siddik, Z.H.; Sessler, J.L. Platinum(IV)-Ferrocene Conjugates and Their Cyclodextrin Host–Guest Complexes. Inorg. Chem. 2019, 58, 7886–7894. [Google Scholar] [CrossRef] [PubMed]
  36. Vaidya, B.; Parvathaneni, V.; Kulkarni, N.S.; Shukla, S.K.; Damon, J.K.; Sarode, A.; Kanabar, D.; Garcia, J.V.; Mitragotri, S.; Muth, A.; et al. Cyclodextrin modified loaded PLGA nanoparticles for improved therapeutic efficacy against non-small cell lung cancer. Int. J. Biol. Macromol. 2019, 122, 338–347. [Google Scholar] [CrossRef]
  37. Zhang, D.; Zhang, J.; Jiang, K.; Li, K.; Cong, Y.; Pu, S.; Jin, Y.; Lin, J. Preparation, characterisation and antitumour activity of β-, γ- and HP-β-cyclodextrin inclusion complexes with oxalilplatin. Spectrochim. Acta Part A Mol. Biomol. Spectrosc. 2016, 152, 501–508. [Google Scholar] [CrossRef]
  38. Taddei, D.; Kilian, P.; Slawin, A.M.Z.; Woollins, J.D. Synthesis and full characterisation of 6-chloro-2-iodopurine, a template for the functionalisation of purines. Org. Biomol. Chem. 2004, 2, 665–670. [Google Scholar] [CrossRef]
  39. Vícha, R.; Rouchal, M.; Kozubková, Z.; Kuřitka, I.; Marek, R.; Branná, P.; Čmelík, R. Novel adamantane-bearing anilines and properties of their supramolecular complexes with b-cyclodextrin. Supramol. Chem. 2011, 23, 663–677. [Google Scholar] [CrossRef] [Green Version]
  40. Zhang, C.; Shokat, K.M. Enhanced selectivity for inhibition of analog-sensitive protein kinase through scaffold optimizaiton. Tetrahedron 2007, 63, 5832–5838. [Google Scholar] [CrossRef]
  41. Zhong, M.; Nowak, I.; Robins, M.J. 6-(2-Alkylimidazol-1-yl)purines Undergo Regiospecific Glycosylation at N9. Org. Lett. 2005, 7, 4601–4603. [Google Scholar] [CrossRef] [PubMed]
  42. Ugarkar, B.C.; Castellino, A.J.; DaRe, J.S.; Ramirez-Weinhouse, M.; Kopcho, J.J.; Rosengren, S.; Erion, M.D. Adenosine Kinase Inhibitors. 3. Synthesis, SAR, and Antiinflammatory Activity of a Series of l-Lyxofuranosyl Nucleosides. J. Med. Chem. 2003, 46, 4750–4760. [Google Scholar] [CrossRef] [PubMed]
  43. Hocek, M.; Holý, A.; Dvořáková, H. Cytostatic 6-arylpurine nucleosides IV+. Synthesis of 2-substituted 6-phenylpurine ribonucleosides. Collect. Czechoslov. Chem. Commun. 2002, 67, 325–335. [Google Scholar] [CrossRef]
  44. Vorbrüggen, H. On Novel Fluorine Reagent in Preparative Organic Chemistry. Helv. Chim. Acta 2011, 94, 947–965. [Google Scholar] [CrossRef]
  45. Lee, S.; Uttamapinant, C.; Verdine, G.L. A Concise Synthesis of 4′-Fluoro Nucleosides. Org. Lett. 2007, 9, 5007–5009. [Google Scholar] [CrossRef]
  46. Tichý, M.; Smolén, S.; Tloušťová, E.; Pohl, R.; Oždian, T.; Hejtmánková, K.; Lišková, B.; Gurská, S.; Džubák, P.; Hajdúch, M.; et al. Synthesis and Cytostatic and Antiviral Profiling of Thieno-Fused 7-Deazapurine Ribonucleosides. J. Med. Chem. 2017, 60, 2411–2424. [Google Scholar] [CrossRef] [Green Version]
  47. Schneider, H.-J.; Hacket, F.; Rüdiger, V.; Ikeda, H. NMR Studies of Cyclodextrins and Cyclodextrin Complexes. Chem. Rev. 1998, 98, 1755–1786. [Google Scholar] [CrossRef]
  48. Tomeček, J.; Čablová, A.; Hromádková, A.; Novotný, J.; Marek, R.; Durník, I.; Kulhánek, P.; Prucková, Z.; Rouchal, M.; Dastychová, L.; et al. Modes of Micromolar Host–Guest Binding of β-Cyclodextrin Complexes Revealed by NMR Spectroscopy in Salt Water. J. Org. Chem. 2021, 86, 4483–4496. [Google Scholar] [CrossRef]
  49. Vícha, R.; Potáček, M. Influence of catalytic system composition on formation of adamantane containing ketones. Tetrahedron 2005, 61, 83–88. [Google Scholar] [CrossRef]
  50. Vícha, R.; Kuřitka, I.; Rouchal, M.; Ježková, V.; Zierhut, A. Directing effects in nitration of 1-adamantyl bearing aromatic ketones. ARKIVOC 2009, xii, 60–80. [Google Scholar] [CrossRef] [Green Version]
  51. Sheldrick, G.M. A short history of SHELX. Acta Crystallogr. 2008, A64, 112–122. [Google Scholar] [CrossRef] [PubMed]
  52. Wang, J.; Li, Y.-H.; Pan, S.-C.; Li, M.-F.; Du, W.; Yin, H.; Li, J.-H. Efficient Phosphorus-Free Chlorination of Hydroxy Aza-Arenes and Their Application in One-Pot Pharmaceutical Synthesis. Org. Process Res. Dev. 2020, 24, 146–153. [Google Scholar] [CrossRef]
  53. Lu, H.-F.; Zhang, L.-Z.; Wu, D.-M.; Zhou, J.-T. Microwave Assisted Synthesis of 2,6-Substituted Aromatic-Aminopurine Derivatives. J. Heterocycl. Chem. 2011, 48, 1140–1144. [Google Scholar] [CrossRef]
Figure 1. Previously published adamantane-based purine nucleosides.
Figure 1. Previously published adamantane-based purine nucleosides.
Ijms 23 15143 g001
Figure 2. Purine nucleosides considered in this work and structurally related derivatives with their antiproliferative activity towards the K562 cell line. IC50 values were taken from a previously published paper [11].
Figure 2. Purine nucleosides considered in this work and structurally related derivatives with their antiproliferative activity towards the K562 cell line. IC50 values were taken from a previously published paper [11].
Ijms 23 15143 g002
Scheme 1. Synthesis of 6-chloro-9H-purine (2).
Scheme 1. Synthesis of 6-chloro-9H-purine (2).
Ijms 23 15143 sch001
Scheme 2. Introduction of aromatic amines to the C6 position of compounds 2 and 3.
Scheme 2. Introduction of aromatic amines to the C6 position of compounds 2 and 3.
Ijms 23 15143 sch002
Scheme 3. Glycosylation and deprotection of purine derivatives.
Scheme 3. Glycosylation and deprotection of purine derivatives.
Ijms 23 15143 sch003
Scheme 4. Reduction of purines 17, 18, 20, and 21 with Na[BH4].
Scheme 4. Reduction of purines 17, 18, 20, and 21 with Na[BH4].
Ijms 23 15143 sch004
Figure 3. An X-ray diffraction analysis of purine 13. An ORTEP diagram was drawn with a 40% ellipsoid probability level.
Figure 3. An X-ray diffraction analysis of purine 13. An ORTEP diagram was drawn with a 40% ellipsoid probability level.
Ijms 23 15143 g003
Figure 4. Positive and negative-ion ESI mass spectra of the equimolar mixture of 24·β-CD. The assignments for the observed ions are shown in the brackets.
Figure 4. Positive and negative-ion ESI mass spectra of the equimolar mixture of 24·β-CD. The assignments for the observed ions are shown in the brackets.
Ijms 23 15143 g004
Figure 5. (A) Portions of the 1H-NMR spectra of the single compound 24 (i) and after the addition of 1 equiv. of β-CD (ii). (B) A ROESY spectrum of the latter mixture. All spectra were recorded in a mixture of DMSO-d6/D2O, 2/1, v/v at 303 K at 400 MHz. Signals of residual CHCl3 and DMSO-d5 are labelled with * and **, respectively.
Figure 5. (A) Portions of the 1H-NMR spectra of the single compound 24 (i) and after the addition of 1 equiv. of β-CD (ii). (B) A ROESY spectrum of the latter mixture. All spectra were recorded in a mixture of DMSO-d6/D2O, 2/1, v/v at 303 K at 400 MHz. Signals of residual CHCl3 and DMSO-d5 are labelled with * and **, respectively.
Ijms 23 15143 g005
Table 1. In vitro antiproliferative activity of purines 1625 and their complexes with β-CD.
Table 1. In vitro antiproliferative activity of purines 1625 and their complexes with β-CD.
CompoundMV4;11 IC50 (μM) 1K562 IC50 (μM) 1
PurinePurine·β-CD (1:1)PurinePurine·β-CD (1:1)
16>25>25>25>25
17>25>25>25>25
1821.8 ± 5.624.6 ± 0.7>25>25
19>25>25>25>25
2016.6 ± 7.621.2 ± 5.421.4 ± 2.322.7 ± 3.2
2123.8 ± 1.724.1 ± 1.3>25>25
2220.0 ± 7.124.4 ± 0.9>25>25
2318.8 ± 8.825.0 ± 0.0>25>25
2412.3 ± 3.918.5 ± 7.823.4 ± 0.424.4 ± 0.8
25>25>25>25>25
1 IC50 values are expressed as the mean ± SD of duplicated experiments. Tumor cell lines: MV4;11, human acute myelogenous leukemia; K562, human chronic myelogenous leukemia.
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Share and Cite

MDPI and ACS Style

Rudolfová, J.; Kryštof, V.; Nečas, M.; Vícha, R.; Rouchal, M. Adamantane-Substituted Purine Nucleosides: Synthesis, Host–Guest Complexes with β-Cyclodextrin and Biological Activity. Int. J. Mol. Sci. 2022, 23, 15143. https://doi.org/10.3390/ijms232315143

AMA Style

Rudolfová J, Kryštof V, Nečas M, Vícha R, Rouchal M. Adamantane-Substituted Purine Nucleosides: Synthesis, Host–Guest Complexes with β-Cyclodextrin and Biological Activity. International Journal of Molecular Sciences. 2022; 23(23):15143. https://doi.org/10.3390/ijms232315143

Chicago/Turabian Style

Rudolfová, Jana, Vladimír Kryštof, Marek Nečas, Robert Vícha, and Michal Rouchal. 2022. "Adamantane-Substituted Purine Nucleosides: Synthesis, Host–Guest Complexes with β-Cyclodextrin and Biological Activity" International Journal of Molecular Sciences 23, no. 23: 15143. https://doi.org/10.3390/ijms232315143

APA Style

Rudolfová, J., Kryštof, V., Nečas, M., Vícha, R., & Rouchal, M. (2022). Adamantane-Substituted Purine Nucleosides: Synthesis, Host–Guest Complexes with β-Cyclodextrin and Biological Activity. International Journal of Molecular Sciences, 23(23), 15143. https://doi.org/10.3390/ijms232315143

Note that from the first issue of 2016, this journal uses article numbers instead of page numbers. See further details here.

Article Metrics

Back to TopTop