Association between Glutathione S-Transferases Gene Variants and COVID-19 Severity in Previously Vaccinated and Unvaccinated Polish Patients with Confirmed SARS-CoV-2 Infection
Abstract
:1. Introduction
2. Materials and Methods
2.1. Genotyping
2.2. Statistical Analysis
3. Results
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
- Anastassopoulou, C.; Gkizarioti, Z.; Patrinos, G.P.; Tsakris, A. Human genetic factors associated with susceptibility to SARS-CoV-2 infection and COVID-19 disease severity. Hum. Genom. 2020, 14, 40. [Google Scholar] [CrossRef] [PubMed]
- Singh, U.; Hernandez, K.M.; Aronow, B.J.; Wurtele, E.S. African Americans and European Americans exhibit distinct gene expression patterns across tissues and tumors associated with immunologic functions and environmental exposures. Sci. Rep. 2021, 11, 9905. [Google Scholar] [CrossRef] [PubMed]
- Severe COVID-19 GWAS Group; Ellinghaus, D.; Degenhardt, F.; Bujanda, L.; Buti, M.; Albillos, A.; Invernizzi, P.; Fernández, J.; Prati, D.; Baselli, G.; et al. Genomewide Association Study of Severe COVID-19 with Respiratory Failure. N. Engl. J. Med. 2020, 383, 1522–1534. [Google Scholar] [CrossRef] [PubMed]
- Pairo-Castineira, E.; Clohisey, S.; Klaric, L.; Bretherick, A.D.; Rawlik, K.; Pasko, D.; Walker, S.; Parkinson, N.; Fourman, M.H.; Russell, C.D.; et al. Genetic mechanisms of critical illness in COVID-19. Nature 2021, 591, 92–98. [Google Scholar] [CrossRef]
- COVID-19 Host Genetics Initiative. Mapping the human genetic architecture of COVID-19. Nature 2021, 600, 472–477. [Google Scholar] [CrossRef]
- Kosmicki, J.A.; Horowitz, J.E.; Banerjee, N.; Lanche, R.; Marcketta, A.; Maxwell, E.; Bai, X.; Sun, D.; Backman, J.D.; Sharma, D.; et al. Pan-ancestry exome-wide association analyses of COVID-19 outcomes in 586,157 individuals. Am. J. Hum. Genet. 2021, 108, 1350–1355. [Google Scholar] [CrossRef]
- Gupta, K.; Kaur, G.; Pathak, T.; Banerjee, I. Systematic review and meta-analysis of human genetic variants contributing to COVID-19 susceptibility and severity. Gene 2022, 844, 146790. [Google Scholar] [CrossRef]
- Kousathanas, A.; Pairo-Castineira, E.; Rawlik, K.; Stuckey, A.; Odhams, C.A.; Walker, S.; Russell, C.D.; Malinauskas, T.; Wu, Y.; Millar, J.; et al. Whole-genome sequencing reveals host factors underlying critical COVID-19. Nature 2022, 607, 97–103. [Google Scholar] [CrossRef]
- Tsermpini, E.E.; Glamočlija, U.; Ulucan-Karnak, F.; Redenšek Trampuž, S.; Dolžan, V. Molecular Mechanisms Related to Responses to Oxidative Stress and Antioxidative Therapies in COVID-19: A Systematic Review. Antioxidants 2022, 11, 1609. [Google Scholar] [CrossRef]
- Klusek, J.; Błońska-Sikora, E.; Witczak, B.; Orlewska, K.; Klusek, J.; Głuszek, S.; Orlewska, E. Glutathione S-transferases gene polymorphism influence on the age of diabetes type 2 onset. BMJ Open Diabetes Res. Care 2020, 8, e001773. [Google Scholar] [CrossRef]
- Klusek, J.; Nasierowska-Guttmejer, A.; Kowalik, A.; Wawrzycka, I.; Lewitowicz, P.; Chrapek, M.; Głuszek, S. GSTM1, GSTT1, and GSTP1 polymorphisms and colorectal cancer risk in Polish nonsmokers. Oncotarget 2018, 9, 21224–21230. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Saadat, M. An evidence for correlation between the glutathione S-transferase T1 (GSTT1) polymorphism and outcome of COVID-19. Clin. Chim. Acta Int. J. Clin. Chem. 2020, 508, 213–216. [Google Scholar] [CrossRef] [PubMed]
- Saadat, M. The morbidity and mortality of COVID-19 are correlated with the Ile105Val glutathione S-transferase P1 polymorphism. Egypt J. Med. Hum. Genet. 2020, 21, 52. [Google Scholar] [CrossRef]
- Abbas, M.; Verma, S.; Verma, S.; Siddiqui, S.; Khan, F.H.; Raza, S.T.; Siddiqi, Z.; Eba, A.; Mahdi, F. Association of GSTM1 and GSTT1 gene polymorphisms with COVID-19 susceptibility and its outcome. J. Med. Virol. 2021, 93, 5446–5451. [Google Scholar] [CrossRef]
- Coric, V.; Milosevic, I.; Djukic, T.; Bukumiric, Z.; Savic-Radojevic, A.; Matic, M.; Jerotic, D.; Todorovic, N.; Asanin, M.; Ercegovac, M.; et al. GSTP1 and GSTM3 Variant Alleles Affect Susceptibility and Severity of COVID-19. Front. Mol. Biosci. 2021, 8, 747493. [Google Scholar] [CrossRef]
- Jerotic, D.; Ranin, J.; Bukumiric, Z.; Djukic, T.; Coric, V.; Savic-Radojevic, A.; Todorovic, N.; Asanin, M.; Ercegovac, M.; Milosevic, I.; et al. SOD2 rs4880 and GPX1 rs1050450 polymorphisms do not confer risk of COVID-19, but influence inflammation or coagulation parameters in Serbian cohort. Redox Rep. Commun. Free Radic. Res. 2022, 27, 85–91. [Google Scholar] [CrossRef]
- Kaja, E.; Lejman, A.; Sielski, D.; Sypniewski, M.; Gambin, T.; Dawidziuk, M.; Suchocki, T.; Golik, P.; Wojtaszewska, M.; Mroczek, M.; et al. The Thousand Polish Genomes—A Database of Polish Variant Allele Frequencies. Int. J. Mol. Sci. 2022, 23, 4532. [Google Scholar] [CrossRef]
- Phan, L.; Jin, Y.; Zhang, H.; Qiang, W.; Shekhtman, E.; Shao, D.; Revoe, R.; Villamarin, E.; Ivanchenko, M.; Kimura, Z.Y. ALFA: Allele Frequency Aggregator. National Center for Biotechnology Information, U.S. National Library of Medicine. Available online: www.ncbi.nlm.nih.gov/snp/docs/gsr/alfa/ (accessed on 10 March 2020).
- van de Wetering, C.; Elko, E.; Berg, M.; Schiffers, C.H.J.; Stylianidis, V.; van den Berge, M.; Nawijn, M.C.; Wouters, E.F.M.; Janssen-Heininger, Y.M.W.; Reynaert, N.L. Glutathione S-transferases and their implications in the lung diseases asthma and chronic obstructive pulmonary disease: Early life susceptibility? Redox Biol. 2021, 43, 101995. [Google Scholar] [CrossRef]
- Townsend, D.M.; Manevich, Y.; He, L.; Hutchens, S.; Pazoles, C.J.; Tew, K.D. Novel role for glutathione S-transferase pi. Regulator of protein S-Glutathionylation following oxidative and nitrosative stress. J. Biol. Chem. 2009, 284, 436–445. [Google Scholar] [CrossRef] [Green Version]
- Zhou, Y.; Cao, X.; Yang, Y.; Wang, J.; Yang, W.; Ben, P.; Shen, L.; Cao, P.; Luo, L.; Yin, Z. Glutathione S-Transferase Pi Prevents Sepsis-Related High Mobility Group Box-1 Protein Translocation and Release. Front. Immunol. 2018, 9, 268. [Google Scholar] [CrossRef] [Green Version]
- Smolonska, J.; Wijmenga, C.; Postma, D.S.; Boezen, H.M. Meta-analyses on suspected chronic obstructive pulmonary disease genes: A summary of 20 years’ research. Am. J. Respir. Crit. Care Med. 2009, 180, 618–631, Erratum in Am. J. Respir. Crit. Care Med. 2010, 181, 765. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Yan, F.; Chen, C.; Jing, J.; Li, W.; Shen, H.; Wang, X. Association between polymorphism of glutathione S-transferase P1 and chronic obstructive pulmonary disease: A meta-analysis. Respir. Med. 2010, 104, 473–480. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Yang, L.; Li, X.; Tong, X.; Fan, H. Association between glutathione S-transferase P1 Ile (105) Val gene polymorphism and chronic obstructive pulmonary disease: A meta-analysis based on seventeen case-control studies. Meta Gene 2015, 6, 59–64. [Google Scholar] [CrossRef] [PubMed]
- Gilliland, F.D.; Gauderman, W.J.; Vora, H.; Rappaport, E.; Dubeau, L. Effects of glutathione-S-transferase M1, T1, and P1 on childhood lung function growth. Am. J. Respir. Crit. Care Med. 2002, 166, 710–716. [Google Scholar] [CrossRef]
- Piacentini, S.; Polimanti, R.; Simonelli, I.; Donno, S.; Pasqualetti, P.; Manfellotto, D.; Fuciarelli, M. Glutathione S-transferase polymorphisms, asthma susceptibility and confounding variables: A meta-analysis. Mol. Biol. Rep. 2013, 40, 3299–3313. [Google Scholar] [CrossRef]
- Hwang, B.F.; Young, L.H.; Tsai, C.H.; Tung, K.Y.; Wang, P.C.; Su, M.W.; Lee, Y.L. Fine particle, ozone exposure, and asthma/wheezing: Effect modification by glutathione S-transferase P1 polymorphisms. PLoS ONE 2013, 8, e52715. [Google Scholar] [CrossRef]
Unvaccinated Patients n = 92 | Vaccinated Patients n = 84 | p-Value | |
---|---|---|---|
Gender, n (%) | 0.7093 | ||
Women | 42 (45.7%) | 36 (42.9%) | |
Men | 50 (54.3%) | 48 (57.1%) | |
Age (years) | 0.0157 | ||
Mean (SD) | 65.8 (15.5) | 70.4 (14.5) | |
Median (Q1, Q3) | 64.5 (56.8, 78.0) | 73.0 (64.8, 81.2) | |
Range | 25.0–94.0 | 26.0–92.5 | |
Age > 70 years, n (%) | 35 (38.0%) | 52 (61.9%) | 0.0016 |
BMI > 25, n (%) | 58 (63.0%) | 50 (59.5%) | 0.6319 |
Smoking, n (%) | 0.4989 | ||
Missing data | 1 | 4 | |
Never | 49 (53.8%) | 36 (45.0%) | |
Former | 37 (40.7%) | 38 (47.5%) | |
Ever | 5 (5.5%) | 6 (7.5%) | |
Vitamin D3 > 30 ng/mL, n (%) | 28 (30.4%) | 28 (33.3%) | 0.6801 |
Glucose > 99 mg% | 51 (55.4%) | 32 (38.6%) | 0.0255 |
Comorbidities, n (%) | 67 (72.8%) | 68 (81.0%) | 0.2027 |
Number of comorbidities | 0.1528 | ||
Mean (SD) | 1.5 (1.3) | 1.8 (1.4) | |
Median (Q1, Q3) | 1.0 (0.0, 2.0) | 2.0 (1.0, 2.2) | |
Range | 0.0–5.0 | 0.0–5.0 | |
GSTP1 | 0.3618 | ||
Wild type | 45 (48.9%) | 38 (45.2%) | |
Ile/Val | 40 (43.5%) | 34 (40.5%) | |
Val/Val | 7 (7.6%) | 12 (14.3%) | |
GSTM1 | 0.8638 | ||
Wild type | 47 (51.1%) | 44 (52.4%) | |
Null | 45 (48.9%) | 40 (47.6%) | |
GSTT | 0.4996 | ||
Wild type | 79 (85.9%) | 69 (82.1%) | |
Null | 13 (14.1%) | 15 (17.9%) | |
COVID-19 severity, n (%) | 0.0001 | ||
Hospitalized without supplemental oxygen | 24 (26.1%) | 48 (57.1%) | |
Hospitalized with standard supplemental oxygen | 65 (70.7%) | 34 (40.5%) | |
Hospitalized with invasive mechanical ventilation and additional organ support | 3 (3.3%) | 2 (2.4%) |
OR (95% CI) | p-Value | |
---|---|---|
Gender | ||
Men (ref.) | ||
Women | 0.63 (0.25–1.6) | 0.3318 |
Age | 1.01 (0.98–1.04) | 0.5581 |
Age > 70 years | ||
No (ref.) | ||
Yes | 1.7 (0.62–4.64) | 0.3003 |
BMI > 25 | ||
No (ref.) | ||
Yes | 4.3 (1.61–11.47) | 0.0036 |
Smoking | ||
Never (ref.) | ||
Former | 0.61 (0.23–1.63) | 0.3214 |
Ever | 0.17 (0.03–1.17) | 0.0713 |
Vitamin D3 > 30 ng/mL | ||
No (ref.) | ||
Yes | 1.09 (0.39–3.01) | 0.8752 |
Glucose > 99 mg% | ||
No (ref.) | ||
Yes | 3.44 (1.29–9.18) | 0.0136 |
Comorbidities | ||
No (ref.) | ||
Yes | 1.14 (0.41–3.21) | 0.7986 |
Number of comorbidities | 1.17 (0.81–1.69) | 0.4 |
GSTP1 | ||
Wild type (ref.) | ||
Ile/Val | 1.25 (0.46–3.38) 1.117 (0.369–3.403) * | 0.6937 0.8435 * |
Val/Val | 0.48 (0.09–2.49) 0.401 (0.055–3.023) * | 0.3859 0.3598 * |
GSTM1 | ||
Wild type (ref.) | ||
Null | 0.94 (0.37–2.39) 1.069 (0.361-3.211) * | 0.9014 0.9037 * |
GSTT1 | ||
Wild type (ref.) | ||
Null | 1.21 (0.3–4.81) 0.732 (0.174–3.771) * | 0.7899 0.6822 * |
OR (95% CI) | p-Value | |
---|---|---|
Gender | ||
Men (ref.) | ||
Women | 0.5 (0.2–1.22) | 0.1289 |
Age | 1.02 (0.99–1.05) | 0.3094 |
Age > 70 years | ||
No (ref.) | ||
Yes | 0.77 (0.32–1.87) | 0.5597 |
BMI > 25 | ||
No (ref.) | ||
Yes | 1.12 (0.46–2.71) | 0.7975 |
Smoking | ||
Never (ref.) | ||
Former | 1.13 (0.45–2.85) | 0.7899 |
Ever | 0.7 (0.11–4.33) | 0.7012 |
Vitamin D3 > 30 ng/mL | ||
No (ref.) | ||
Yes | 1.24 (0.5–3.1) | 0.6402 |
Glucose > 99 mg% | ||
No (ref.) | ||
Yes | 0.83 (0.34–2.04) | 0.6891 |
Comorbidities | ||
No (ref.) | ||
Yes | 0.7 (0.23–2.09) | 0.522 |
Number of comorbidities | 1.22 (0.88–1.69) | 0.2236 |
GSTP1 | ||
Wild type (ref.) | ||
Ile/Val | 2.74 (1.05–7.18) 3.086 (1.164–8.685) * | 0.0398 0.0262 * |
Val/Val | 1.55 (0.41–5.89) 1.463 (0.356–5.728) * | 0.5217 0.5853 * |
GSTM1 | ||
Wild type (ref.) | ||
Null | 0.97 (0.41–2.310) 0.909 (0.373–2.198) * | 0.9497 0.8318 * |
GSTT1 | ||
Wild type (ref.) | ||
Null | 0.27 (0.07–1.05) 0.258 (0.065–1.022) * | 0.0593 0.0538 * |
OR (95% CI) | p-Value | |
---|---|---|
Gender | ||
Men (ref.) | ||
Women | 0.62 (0.34–1.13) | 0.1171 |
Age | 1.0 (0.98–1.02) | 0.6678 |
Age > 70 years | ||
No (ref.) | ||
Yes | 0.8 (0.44–1.46) | 0.4603 |
BMI > 25 | ||
No (ref.) | ||
Yes | 2.04 (1.1–3.78) | 0.0246 |
Smoking | ||
Never (ref.) | ||
Former | 0.77 (0.41–1.46) | 0.4238 |
Ever | 0.33 (0.09–1.21) | 0.0942 |
Vitamin D3 > 30 ng/mL | ||
No (ref.) | ||
Yes | 1.1 (0.58–2.11) | 0.7648 |
Glucose > 99 mg% | ||
No (ref.) | ||
Yes | 1.9 (1.03–3.52) | 0.0406 |
Comorbidities | ||
No (ref.) | ||
Yes | 0.79 (0.38–1.62) | 0.5207 |
Number of comorbidities | 1.12 (0.89–1.4) | 0.3311 |
COVID-19 vaccination | ||
No (ref.) | ||
Yes | 0.26 (0.14–0.5) | <0.0001 |
GSTP1 | ||
Wild type (ref.) | ||
Ile/Val | 1.76 (0.92–3.37) | 0.0888 |
Val/Val | 0.76 (0.28–2.06) | 0.5902 |
GSTM1 | ||
Wild type (ref.) | ||
Null | 0.98 (0.54–1.79) | 0.9444 |
GSTT1 | ||
Wild type (ref.) | ||
Null | 0.54 (0.24–1.22) | 0.1409 |
Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
© 2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Share and Cite
Orlewska, K.; Klusek, J.; Zarębska-Michaluk, D.; Kocańda, K.; Oblap, R.; Cedro, A.; Witczak, B.; Klusek, J.; Śliwczyński, A.; Orlewska, E. Association between Glutathione S-Transferases Gene Variants and COVID-19 Severity in Previously Vaccinated and Unvaccinated Polish Patients with Confirmed SARS-CoV-2 Infection. Int. J. Environ. Res. Public Health 2023, 20, 3752. https://doi.org/10.3390/ijerph20043752
Orlewska K, Klusek J, Zarębska-Michaluk D, Kocańda K, Oblap R, Cedro A, Witczak B, Klusek J, Śliwczyński A, Orlewska E. Association between Glutathione S-Transferases Gene Variants and COVID-19 Severity in Previously Vaccinated and Unvaccinated Polish Patients with Confirmed SARS-CoV-2 Infection. International Journal of Environmental Research and Public Health. 2023; 20(4):3752. https://doi.org/10.3390/ijerph20043752
Chicago/Turabian StyleOrlewska, Katarzyna, Justyna Klusek, Dorota Zarębska-Michaluk, Kamila Kocańda, Ruslan Oblap, Anna Cedro, Bartosz Witczak, Jolanta Klusek, Andrzej Śliwczyński, and Ewa Orlewska. 2023. "Association between Glutathione S-Transferases Gene Variants and COVID-19 Severity in Previously Vaccinated and Unvaccinated Polish Patients with Confirmed SARS-CoV-2 Infection" International Journal of Environmental Research and Public Health 20, no. 4: 3752. https://doi.org/10.3390/ijerph20043752
APA StyleOrlewska, K., Klusek, J., Zarębska-Michaluk, D., Kocańda, K., Oblap, R., Cedro, A., Witczak, B., Klusek, J., Śliwczyński, A., & Orlewska, E. (2023). Association between Glutathione S-Transferases Gene Variants and COVID-19 Severity in Previously Vaccinated and Unvaccinated Polish Patients with Confirmed SARS-CoV-2 Infection. International Journal of Environmental Research and Public Health, 20(4), 3752. https://doi.org/10.3390/ijerph20043752