1. Introduction
Potato (
Solanum tuberosum L.) is the fourth main food crop in the world after maize, rice, and wheat, and is widely consumed every year with a total production of 370 million tons in 2023 [
1]. Potato susceptibility to fungal or bacterial diseases varies across potato cultivars. One of the main factors is the periderm thickness of the tubers [
2]. During postharvest storage, more than half of the potato crop is stored for three to nine months at 4–10 °C for the fresh and processing markets and at temperatures below 4 °C for the seed market. During the storage period, the appearance of fungal or bacterial rots is a challenge that must be faced by the potato industry. The main fungal disease in Europe after black dot is dry rot, causing postharvest fungal decay and therefore consequently large economic losses [
3]. Currently, 17 different species and five variants of
Fusarium have been identified as responsible for dry rot in potato tubers, including
F. avenaceum,
F. solani var.
coeruleum,
F. sambucinum, and
F. oxysporum, among others [
3,
4].
Fusarium spp. generally infect potato tubers through surface wounds or natural openings at pre- and postharvest stages, resulting in wrinkled brown skin and sunken tissue with a dry appearance [
5].
Therefore, maintaining the optimal environmental conditions (temperature and relative humidity) during storage is essential for controlling the incidence of fungal or bacterial rots. Understanding the
in vitro ecophysiology of
Fusarium spp. responsible for these diseases will provide insight into how different environmental conditions affect the development of dry rot in potato tubers during storage. To determine the effect of different relative humidity on the development of
Fusarium spp.
in vitro, a range of water activities (a
w) can be used. The a
w is related to the water available in the matrix for fungal growth. It is considered one of the most important factors affecting fungal growth and their secondary metabolites production [
6,
7,
8,
9]. Therefore, this relationship will allow the simulation of a constant relative humidity in commercial storage facilities at a specific cold temperature.
Some of the
Fusarium spp., such as
F. sambucinum,
F. sulphureum,
F. coeruleum,
F. graminearum, and
F. oxysporum, responsible for dry rot in potato tubers can produce secondary metabolites known as mycotoxins.
Fusarium spp. produce both trichothecenes and non-trichothecenes [
3]. Trichothecenes are classified into four types (A, B, C, and D) based on their chemical structure, with types A and B being detected in rotten potato tubers [
10]. T-2 toxin, HT-2 toxin, neosolaniol (NEO), diacetoxyscirpenol (DAS), and 15-acetoxyscirpenol (15-AS) are type A trichothecenes, while nivalenol, fusarenon X, deoxynivalenol (DON), 3-Acetyldeoxynivalenol (3-ADON), and 15-acetyldeoxynivalenol (15-ADON) are considered trichothecenes type B. Ingestion of trichothecenes can cause serious health issues in animals and humans, presenting immunosuppressive and mutagenic effects [
10].
In previous studies, fusarenon X, 3-ADON, T-2, and DAS were detected in dry-rot-affected potato tubers infected with
F. sulphureum,
F. solani, and
F. sambucinum at different storage temperatures (5 °C, 20 °C) in two potato cultivars [
11,
12].
F. graminearum was also identified as a producer of DON, nivalenol, 3-ADON, and 15-ADON in inoculated potato tubers [
13].
The main non-trichothecenes are beauvericin, enniatin, fumonisin B1, fumonisin B2, fusarin C, zearalenone (ZEN), and fusaric acid; they all have been previously detected in potatoes infected with
F. oxysporum [
14].
Although previous studies have evaluated the effect of temperature and aw in some Fusarium spp., different temperatures were studied. In the present study, the effect of these environmental factors was evaluated in vitro and in vivo, not only on the fungal development, but also in their mycotoxin accumulation. There is limited research on the accumulation of mycotoxins in potato tubers stored under different environmental conditions. Therefore, elucidating the effect of storage temperature and relative humidity on the accumulation of mycotoxins will provide insight into the food safety of potato tubers. Besides, the time that potato tubers spend in storage, previous to their release to the market, could have an effect on the disease severity, and consequently on the mycotoxin accumulation.
The aims of this study were to (1) elucidate the effect of three different temperatures (5, 10, and 15 °C) and two different aw (0.97, 0.99) on the ecophysiology of F. sambucinum and F. oxysporum in a potato-based semi-synthetic media; (2) evaluate the effect of temperature and aw on the mycotoxin accumulation in vitro of both species; and (3) determine the mycotoxin accumulation in potato tubers under standard commercial storage conditions.
3. Discussion
This study has compared the effect of two-way interacting environmental conditions (temperature, a
w) on
F. sambucinum and
F. oxysporum growth and temporal mycotoxin accumulation
in vitro. It has been previously observed that in commercial potato stores, spatial differences are often observed in temperature and relative humidity conditions [
15,
16]. Therefore, unveiling how the different environmental conditions can affect fungal development and mycotoxin accumulation of
Fusarium spp. is essential for the potato industry. Providing farmers with good practices to avoid or reduce the development of dry rot is beneficial for storage management and can contribute to the reduction of potato losses, while maintaining high food safety standards.
In this study, both
Fusarium spp. have shown a reduction in lag time and an increase in growth rate because of increased temperature and a
w. An increase in temperature modified the overall lag time values from 13.1 to 3.6 days. The growth rate of
F. sambucinum at 15 °C was 3.6 times higher than at 5 °C, and double that at 10 °C.
F. sambucinum showed a lower lag time and higher growth rate compared to
F. oxysporum under the same conditions.
In vivo studies on the development of
Fusarium spp., responsible for dry rot in potato tubers, suggested that changes in temperature from 5 °C to 20–25 °C were directly affecting the severity of damage in potato tubers infected with
Fusarium spp. (
F. coeruleum,
F. sambucinum,
F. avenaceum), responsible for dry rot [
17,
18,
19,
20,
21,
22]. An increase in the severity of dry rot, produced by
F. sambucinum, has also been observed under high relative humidity conditions [
19]. Although these results were observed
in vivo, they were in accordance with our results. Therefore, an increase in the humidity conditions allowed a quicker development of
Fusarium spp.
The effect of temperature on the growth of
Fusarium spp.
in vitro has been studied several times on different media, such as PDA. Daami-Remadi et al. (2006) studied the effect of temperature on both pathogens, different isolates,
in vivo and
in vitro. In their
in vitro experiment, both
Fusarium spp. were inoculated in non-modified PDA (0.995 a
w), and the diameter of colonies was observed six days after incubation at the same temperatures as the present study (5, 10, 15 °C) [
23]. The main differences between these results and ours were for
F. oxysporum. They did not observe any growth at 5 °C and the colony diameter was lower at 10 and 15 °C, by 10 and 15 mm, respectively. Also, they observed larger colonies for
F. sambucinum compared to
F. oxysporum; the opposite of what was observed in the present study. Those differences might be due to the different formulation of the media. In our study, a 30%-containing mashed potato media to be more representative of
in vivo potato tubers. Therefore, the findings achieved in this work suggest that higher temperatures in storage will directly increase the growth of
F. sambucinum and
F. oxysporum.
The effect of temperature and a
w on
F. sambucinum, isolated from rice, in rice extract agar (REA) was previously studied by Ferre et al. (2007). The growth rate of
F. sambucinum at 15 °C at 0.95, 0.98, and 0.995 a
w increased along with the a
w tested [
24]. These data were in accordance with the present study. They observed values between 1 and 3 mm/day at 0.95 and 0.995 a
w, respectively; values that were almost 1/6 of our results, achieving a growth rate at 15 °C × 0.99 a
w of 9 mm/day. This difference might be due to the media and the specific strain of
F. sambucinum. These results are in accordance with the present findings regarding the effect of the relative humidity on the growth of
F. sambucinum. The increase in the relative humidity of potato storage rooms will benefit the growth of
F. sambucinum.
This is the first time where the effect of storage stage of potato tubers has been evaluated on
F. sambucinum development in two different potato cultivars. A higher lesion severity was observed in cv. Casablanca compared to cv. Record. This severity difference could be because Record is a maincrop cultivar, while Casablanca is an earlier cultivar. This is supported by previous studies where a higher susceptibility to dry rot was observed in earlier cultivars compared to maincrop due to their physiological characteristics [
17,
21]. This might be caused by the effect of storage time on lesion severity of dry rot. Casablanca, an earlier cultivar, showed higher disease severity with the increase in storage time. This could be due to the physiological changes that the cultivar was experiencing during storage. Although the effect of long-term storage in potato tubers has been previously evaluated in soft rot, a bacterial potato disease [
25], there are no studies focused on the effect of dry rot. More recently, the Agriculture and Horticulture Development Board has confirmed that Casablanca is susceptible to both
F. coeruleum and
F. sulphureum [
26], and our results confirm a higher degree of severity of damage to
F. sambucinum in cv. Casablanca compared to cv. Record. Our research is the first highlighting studying disease severity of
F. sambucinum in cv. Record.
Different mycotoxins were detected
in vitro in the presence of both
Fusarium spp. The trichothecenes detected in this study were T-2, HT-2, DAS, NEO, and 15-AS, while the only non-trichothecene detected was beauvericin. Elucidating the accumulation of those mycotoxins by
F. sambucinum and
F. oxysporum, both responsible for dry rot in potato tubers, at the different environmental conditions studied, can provide interesting information regarding the food safety of potato tubers infected with dry rot. In the presence of
F. sambucinum, a larger number of mycotoxins were detected: T-2, HT-2, DAS, NEO, 15-AS, and beauvericin. While in presence of
F. oxysporum, only T-2 was detected. This is in accordance with what has already been reported regarding the mycotoxins produced by both
Fusarium spp. In presence of
F. oxysporum, T-2 and beauvericin were detected on different matrixes, while in presence of
F. sambucinum, T-2, HT-2, NEO, DAS, 15-AS, and beauvericin were detected [
27].
In this study, the accumulation of most mycotoxins was directly related to the growth of both
Fusarium spp. Indeed, an increased growth of the fungi led to a higher accumulation of toxins. Therefore, their production was directly affected by the temperature and a
w. The accumulation of mycotoxin was also evaluated
in vivo. T-2, followed by HT-2, DAS, and 15-AS were detected at the highest concentration with a predominance for an increase in mycotoxins presence with time. The same effect as the one observed for the disease severity was observed in cv. Casablanca; those tubers that were stored for a longer time presented a higher accumulation of mycotoxins. Previous research has been carried out on the detection of mycotoxins in potato tubers [
10,
11,
12,
13,
14,
28]. The influence of cultivar and storage temperature on the accumulation of mycotoxins in potato tubers was studied on three
Fusarium spp. (
F. sambucinum,
F. solani,
F. sulphureum). They evaluated the accumulation of mycotoxins after 21 and 60 days when potato tubers were stored at 20 and 5 °C, respectively. Although their accumulation was higher at 20 °C, after 60 days of storage at 5 °C, Fusarenon X, 3-AcDON, DAS, and T-2 were detected at low concentrations [
10]. Their results were in accordance with the results observed here, where a higher concentration of trichothecenes was detected at higher temperatures. However, our study is the first studying the effect of storage time of potato tubers on the mycotoxin accumulation [
10,
11,
12,
13,
14,
28].
The effect of temperature is notable as mycotoxins were already detected at low temperatures (5, 10 °C). This is the first study where mycotoxins, such as T-2, HT-2, DAS, 15-AS, and NEO have been detected in the presence of
Fusarium spp. responsible for dry rot under cold temperature conditions (below 10 °C). Twenty-one days were needed for both
Fusarium spp., mainly
F. sambucinum, to start producing mycotoxins at the lowest temperature studied (5 °C). Therefore, considering that potato tubers can be stored for up to 10 months, if the environmental conditions are optimal for the development of
Fusarium spp., the accumulation of mycotoxins can take place in the potato tuber. Previous studies have already detected the accumulation of beauvericin in the presence of
F. sambucinum in MEA and potato tubers, when they were stored at 25 °C. However, DAS was only detected
in vitro, while its detection was lower than the LOD
in vivo [
29]. This could be due to the differential severity that different potato cultivars present to pathogen infection. Since July 2024, there are EU maximum limits for the sum of T-2 and HT-2 in different commodities, such as cereals. As an example, in maize, the maximum level for direct human consumption is 50 µg/kg [
30]. Although there is no current limit for potatoes, a concentration of 3 × 10
4 and 10
4 of HT-2 and T-2 ng per g of potato was observed in this study. Considering those values and comparing them with the EU recommendation in maize, they would be exceeding the limit if a regulation is to be imposed. Considering that potato is the fourth most consumed crop in the world, a high concentration of mycotoxins could be present once potato tubers are sold.
These findings were achieved under controlled laboratory conditions, which included surface-sterilisation and space between potato tubers. In a commercial potato storage facility, tubers are stored in bulk in 1-ton boxes, in close contact, where infection between tubers will spread quicker and remain not visible until a significant portion of the box is already infected. This suggests that, not only should there be a regular control of the storage facility, focusing on the sensible areas to changes in temperature, but also new storage systems that allow the early detection of rotten tubers.
Maintaining food safety is our first objective. Therefore, the fluctuation in temperature and relative humidity of potato storage facilities could result in an increase in dry rot in stores, higher severity of the damage appearing in fewer days, and higher accumulation of mycotoxins. Good practices in storage should be reviewed, such as including regular checks for the presence of fungal rots in those areas of the storage where the environmental conditions are more susceptible to change (lower and upper zones). Especially considering that some cultivars, in particular cv. Casablanca, could change their susceptibility to suffer severe damages by dry rot depending on the storage time of potatoes. Those potatoes stored for a longer time, prior to be sold, will present higher severity damages of dry rot as less time will be required for the fungi to infect and higher concentrations of mycotoxins. Furthermore, considering that once the potato tuber arrives to the consumer, the storage temperature will increase and so will the Fusarium spp. development and, consequently, the presence of mycotoxins. This will result in consumer exposure to mycotoxins and a large amount of food loss and waste in households, as well as a potential risk to the sustainability of the potato supply chain.
5. Materials and Methods
5.1. Fungal Pathogens
Fusarium sambucinum, responsible for dry rot on potato tubers, was supplied from the Plant Breeding and Acclimatization Institute (IHAR, Błonie, Poland). While
F. oxysporum was isolated in Bedfordshire, UK from rotten potato tubers cv. Markies in October 2018 and the identification was molecularly confirmed based on Gil-Serna et al. (2016) technique at Cranfield University (UK) [
31]. Both fungal strains were subcultured in Potato Dextrose Agar (PDA, Sigma-Aldrich, Dorset, UK) for 7 days at 25 °C in the dark. A glycerol: water (70:30,
v/
v) stock solution of the previous culture was prepared separately and stored at -20 °C until its use.
5.2. Inoculation and Incubation of F. sambucinum and F. oxysporum In Vitro
Both Fusarium spp. were studied in vitro in a natural potato-based media at three different temperatures (5, 10, and 15 °C) and at two different water activities (0.97 and 0.99 aw). The two different water activities simulated high and low relative humidity conditions, 97% and 99%, respectively.
A semi-synthetic growth medium, Natural Potato Dextrose Agar (NPDA), was formulated to simulate the natural crop commodity. NPDA was prepared with 2% of glucose (Fisher Scientific, Waltham, MA, USA), 1.5% of agar (Sigma-Aldrich, Dorset, UK), and 30% of mashed potato in 1 L of potato infusion. Potato infusion was prepared with 200 g of peeled potatoes (cv. Maris Piper) boiled in 1 L of dH2O for 20 min and filtered through a single layer of cheesecloth (Fisher Scientific, USA). After filtration, the glucose and agar were added, as well as the mashed potato from the resulted boiled potatoes. The aw of the resulting solution was then modified with glycerol, based on a previously conducted aw regression line. The aw of the NPDA was measured with a AQUALAB 4TE aw meter (Decagon Instruments; Pullman, Washington, DC, USA). The NPDA media was dispensed in Petri dishes (Ø 9 cm) (ThermoFisher Scientific, Waltham, MA, USA).
An aliquot of the glycerol stock of each of the fungal strains was inoculated on PDA and incubated for 7 days at 25 °C, prior to the experiment. A spore suspension of 108 spores/mL was prepared using a Helber Haemocytometer and 1 µL was plated in the centre of the solid media. NPDA plates were incubated at three temperatures (5, 10, and 15 °C) and two different aw conditions (0.97, 0.99) for 30 days. To maintain the aw of the media, cultures from each pair of conditions (T° × aw) were stored inside 12 L airtight boxes containing a solution of glycerol: water adapted to the specific aw. Three replicates (12 L airtight boxes) were used per temperature and aw with NPDA non-inoculated plates and inoculated with F. sambucinum and F. oxysporum.
The mycotoxin content was studied in vitro at three different sampling points (7, 14, and 21 days). Three replicates were included and samples were kept at −20 °C until mycotoxin analysis was carried out.
5.3. Inoculation and Incubation of F. sambucinum on Potato Tubers
A parallel experiment was carried out in vivo, where F. sambucinum was inoculated in surface-sterilised potato tubers and incubated at 8.5 °C for 40 days. Two cultivars of potato tubers, cultivated under organic farming conditions, were selected based on their susceptibility to dry rot (cv. Casablanca, cv. Record). Both cultivars were stored for two different periods of time under cold conditions, prior to the experiment. Half were stored for 10 weeks (early stage of storage), and the other half were stored for 22 weeks (mid-stage of storage) at 4 °C.
Potato tubers were washed by soaking them in tap water for five minutes followed by ten minutes in distilled water, removing the excess of soil with a scrubber. Potato tubers were submerged for 15 min in 0.5% NaClO. Afterwards, tubers were washed twice with sterile distilled water and immersed in sterile distilled water for two to three hours before their inoculation. Tubers were wounded (5 mm in diameter) in the centre and inoculated with 200 µL of the spore suspension. Three replicates of twelve potato tubers were stored in 12 L airtight boxes and incubated at 8.5 °C under 98% of relative humidity. Non-inoculated potato tubers were also included as a control with the water/glycerol solution to maintain the relative humidity.
The mycotoxin content of potato tubers was analysed after 10 and 40 days of incubation at 8.5 °C. Three replicates were included per combination of conditions and samples were kept at −20 °C until the analysis was carried out.
5.4. Diametric Growth Rates of F. sambucinum and F. oxysporum on Potato-Based Media
Fungal growth was assessed daily after the inoculation from six different plates of each of the different conditions (temperature × a
w). Colony diameters were measured in two perpendicular directions to each other. Two different growth parameters were calculated, growth rate (µ
m, mm of diameter per day) and lag time (λ, days), using Microsoft Excel (version 2203). The regression line slope was considered as the growth rate, while the lag time was estimated as the interception between the regression line and the
x-axis [
32].
5.5. External Lesion Assessment of Potato Tubers Infected with F. sambucinum
The external lesion was assessed after 10 and 40 days of storage at 8.5 °C. Five potato tubers from each treatment were considered. Assuming the potato lesion to be round, the area of the rots (A) was calculated based on the area of a circle, where r was half of the average of the measured diameters of the rot. The area of non-inoculated tubers (control) was subtracted from the area of each rot on each specific day measured.
5.6. Mycotoxin Analysis
The mycotoxin content was studied in vitro and in vivo. The mycotoxin extraction from the semi-synthetic media consisted of three plugs of NPDA of 5 mm in diameter, submerged in Liquid Nitrogen (N2) and homogenised with 450–600 µm of glass beads using the Precellys 24 Tissue homogenizer (Bertin Instruments, Montigny-le-Bretonneux, France). For the potato samples, 100 mg of rotten tissue were agitated in a Tissue Homogenizer at 5500 rpm for 20 s followed by a 5 s interval and another 20 s of agitation. Then, a volume of extraction buffer (acetonitrile: water: formic acid, 79:20.9:0.1, v/v/v) was added and they were again homogenised. The volume of the extraction buffer was 4 times the weight of each of the samples. Samples were then left for incubation for 90 min at 25 °C at 300 rpm on a rotary shaker in the dark. Afterwards, the extracts were centrifuged for 10 min at 22,600× g, the supernatant (200 µL), transferred to HPLC vials containing 250 µL microinserts (Fisher Scientific, USA), and kept at −20 °C until their analysis.
Ultra-high-performance liquid chromatography tandem mass spectrometry (UHPLC-MS/MS) (Sciex Technologies, Warrington, UK) was used for the mycotoxin detection. Chromatographic separation was achieved on a reverse-phase ACE 3-C
18 column (2.1 × 100 mm, 3 µm particle size; Hichrom, Reading, UK) equipped with a C
18 security guard cartridge (4 × 3 mm, Gemini, Agilent Technologies, Santa Clara, CA, USA) kept at 40 °C, as described in Gil-Serna et al. (2022) [
33]. The method recovery was validated in potato tissue and NPDA media including the targeted mycotoxins (
Supplementary Material). Fifteen mycotoxins were included with standards for the sample analysis. Five trichothecenes A were included: T-2, HT-2, DAS, and 15-AS; five trichothecenes B: DON, 3-ADON, 15-ADON, nivalenol, and fusarenon X; and, five non-trichothecenes mycotoxins: beauvericin, fumonisin B1 and B2, fusaric acid, and ZEN. Multiquant 3.03 software (AB Sciex, Foster City, CA, USA) was used for the analysis of the results.
5.7. Statistical Analysis
Statistical analysis was performed using JMP Pro 14 (SAS Institute, INC., Cary, NC, USA). Data sets were tested for normality and homoscedasticity using the Shapiro–Wilk and Levene’s tests, respectively. Those datasets that succeeded in the previous test were analysed using parametric test, ANOVA. A post hoc analysis (Tukey–Kramer HSD method) was carried out when significant differences were detected (p-value < 0.05). For those datasets that the normality and homoscedasticity test failed, a non-parametric test (Kruskal–Wallis) was performed with a post hoc analysis (Wilcoxon test) when significant differences were detected (p-value < 0.05).